mRNA_P-wetherbeei_contig1400.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1400.2.1
Unique NamemRNA_P-wetherbeei_contig1400.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: D7FN88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN88_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 6.040e-72
Identity = 134/287 (46.69%), Postives = 179/287 (62.37%), Query Frame = 1
Query:   16 QVERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEIDDAVEAD------------AAAVENAMDGAERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSD-PDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKVSTTVDEYD 837
            ++ERY RAF VFDD +R+  DILAVSGF A+V  VFAS+L+YY E   PDP+M  YY S+P AMWVT+LNL+GEAPLCDYT+WGK+ITG LG   VGVFA+PVGL+GAG++ ++E   D  E D            A+   N+  G   + G ++       +   L      RT  GR FE  ++F I ++V   IL T   +C  E+ CP V D +EL+AV+ FT EY  R+ AAP   P+        C AR+ ++ SFY +ID L++FPYY+A++S  VDEYD
Sbjct:  475 KLERYVRAFEVFDDAIRDQHDILAVSGFFALVAWVFASSLLYYTESEGPDPNMTPYYQSVPMAMWVTMLNLAGEAPLCDYTVWGKIITGALGIFGVGVFAVPVGLLGAGFQEYVEAFPDKEEQDTHKGNLPIRAGLASGTSNSSAGERGSPGGSRQKPLRKRLHAFLE----ARTTWGRRFEAFIMFVIFVTVTQVILMTMPSVCEDENHCPTVFDNVELVAVVIFTLEYAARVYAAPEAYPEK-----SACMARLRYMVSFYAMIDFLAIFPYYVAQMSARVDEYD 752          
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: A0A836CDK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK7_9STRA)

HSP 1 Score: 239 bits (609), Expect = 5.560e-68
Identity = 149/309 (48.22%), Postives = 197/309 (63.75%), Query Frame = 1
Query:   22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEIDDAVEADAAAVENAMDGAERAVG--------AAKPAGTA--PAVEWALPPAG-----GGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPA------VLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKVSTTVDEYDXXXXXXXXXXXXKMDK 885
            ERY RAF+VFDD+ R+N+D+LAV+GF AVV+ VFASTLMYYAER+NPD DM  YYTS  NAMW+TLLNL+GEAPL DYT+ GKLIT V+GC+AVGVFA+P GL+ AG+  W+E+  + +E +A   E A   A+  VG        ++ P G A  P ++   P         G +P GR F   ++  I++++   I  T   +CPS+  C        + D +E+ AV  FT EY LRL +AP  P     + G  W R+ ++ SF+  IDAL++ P+YL      +DEYDXXXXXXXXXXXX MDK
Sbjct:  462 ERYVRAFTVFDDIFRDNLDVLAVTGFAAVVLWVFASTLMYYAERDNPDEDMRKYYTSALNAMWMTLLNLTGEAPLADYTIAGKLITAVIGCLAVGVFAVPTGLVAAGFSDWVEDQQEKIEEEAK--EAAEGEAQLQVGQLQVEGGGSSAPLGAALDPEIDHTTPRHRVYVFVEGLSPLGRKFNIAIIALILITIFQTIFMTVDSICPSDQHCMGDSMGLGIFDLMEMFAVAVFTIEYILRLYSAPELPQ----YRGRSWPRLQYVASFWATIDALAILPFYLIYFFPVLDEYDXXXXXXXXXXXXXMDK 764          
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: A0A7S2XN37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XN37_9STRA)

HSP 1 Score: 198 bits (504), Expect = 3.760e-55
Identity = 117/304 (38.49%), Postives = 168/304 (55.26%), Query Frame = 1
Query:   22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEIDDAVEADAAAV--------------ENAMDGAERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKV--STTVDEYDXXXXXXXXXXXXKMDK 885
            E+YT+AF+ FDDV+R N+D+ AV+GF A ++ VF   ++YY ER+NPDP+MA+YY ++PNAMWVTLLNLSGE+PLC Y++WGK+ TG++G  A GVF IP+G++G+G+E  + E  D    D AA               EN ++      G          V +      G  +     FE  +   I+++V   I QT        +     L+WI   AV  FT EY LR + AP+DP+   S      A V ++FSFY V+D L++ P+YLA +   + VD +D            K+DK
Sbjct:  336 EKYTKAFTTFDDVIRLNMDVFAVTGFTAFILWVFFGAILYYTERDNPDPEMASYYNTVPNAMWVTLLNLSGESPLCQYSIWGKVATGIIGLFASGVFGIPIGVLGSGFEEIVVESTDDTPDDEAATGTPNSDVLALSKEDENGLEEETHHRG-----NYIQRVCYQF--VNGQGSKMAMNFELSIYVLILITVTVGIFQTVE----GHENSFHQLEWI---AVAVFTIEYLLRTIGAPADPEFRSSGSNPVVATVRYLFSFYSVVDLLAIVPFYLAIIMPGSWVDNHDEYLRMFRLLRLIKLDK 625          
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: A0A7S1VPC1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VPC1_9STRA)

HSP 1 Score: 198 bits (504), Expect = 8.540e-54
Identity = 109/270 (40.37%), Postives = 164/270 (60.74%), Query Frame = 1
Query:   22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEIDDAVEADAAAVENAMDGAERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKVSTTVDE 831
            E+YT AF  FDDV+ +N+D+LAV+GF A+++ VF + ++Y+ ER+NPD +MAA Y ++PNAMW+TLLNL+GE+PL  Y++WGK+ITGVLG  A G+F IP+G++GAG+E  + E ++  E +  A E A D        A   G+    +       G  +  G+ FE  +   I+LS+A  I QT       ED+  + L+W    +++ FT E+ +R + AP+DP   G      + R+ FIFSFY +ID  ++ P+Y A      DE
Sbjct:  520 EKYTHAFRSFDDVISDNIDVLAVTGFTAMLVWVFFAAILYFTERDNPDEEMAANYNNVPNAMWMTLLNLTGESPLAQYSVWGKIITGVLGLFATGLFGIPIGVLGAGFEEVVAEENEDDEDELNAEELARD--------ATADGSNSVEKACYLFVNGAGSKAGQYFEIFIYILILLSIAVGIWQTVD---GHEDDFGS-LEW---FSIVVFTIEFLIRFIGAPADPLFGGPESNGLFTRIRFIFSFYSIIDLFAILPFYYAIAFPAADE 774          
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: L1IZZ6_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1IZZ6_GUITC)

HSP 1 Score: 191 bits (485), Expect = 1.840e-51
Identity = 125/295 (42.37%), Postives = 173/295 (58.64%), Query Frame = 1
Query:   16 QVERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPD---PDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEIDDAVEADAAAVENAMDGAERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKV--STTVDEYDXXXXXXXXXXXXKMDK 885
            ++E Y + F++FDD+L  N D+LAVSGF A V+ +F S++MY  ERNNP    PD   YY SIP+AMW TLLNL GE PLCDY+  GK+I+GV+G +AVG FAIP+G++G G+E W  E     + DA+  + +    E  +         P  ++       GRT  G  FE ++ + I  +V    ++T   L     E   +LD IEL++V  FT EY LRL++AP DP     +    + R+ FIFSFY +ID L++ PYY + +     VD+YD      XXXXXX MDK
Sbjct:  278 KLESYVKVFTIFDDILLNNRDVLAVSGFAATVLWIFFSSVMYLLERNNPKLVAPDGKHYYASIPDAMWPTLLNLCGEVPLCDYSPLGKVISGVMGVLAVGTFAIPIGILGNGFEEWATERYSKKDEDASQQQESHSQEESFL--------FPIRQFVE-----GRTLLGSIFEQILFYLIFATVFQQSMET---LPDFSKEHKHLLDHIELISVCIFTIEYILRLISAPLDP----LFSSKRFPRMRFIFSFYAIIDFLTIAPYYWSLLFPGGLVDKYDEALRMLXXXXXXXMDK 552          
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: A0A448Z0F0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0F0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 3.020e-51
Identity = 123/296 (41.55%), Postives = 168/296 (56.76%), Query Frame = 1
Query:   22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEI--DDAVEADAAAVENAMDGAERAVGAAKPAGT--APAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLV--GSWGGCCWARVAFIFSFYGVIDALSVFPYY--LAKVSTTVDEYDXXXXXXXXXXXXKMDK 885
            E+YT AF+ FDDV   N D+L+V+ F +V++ VF   L+Y  ER+NPDP+MAA Y S+PNAMW+TLLNLSGEAPL  Y++ GK+ TG+LG  A  +F IP+G++G G+E  +EE   D AVE +AA  EN       AV A+ P G     A  W    A G  +   R+ E L+   I +++A    QT       ED+       IE L V  FT EY +RL+   +DP     G   G   +R+A++ SFY VID L++ PYY  LA   + +D+YD            K+DK
Sbjct:  594 EKYTHAFTSFDDVFSRNYDVLSVTFFSSVLLWVFFGALLYATERDNPDPEMAANYNSVPNAMWMTLLNLSGEAPLAQYSVVGKIATGILGLFATAIFGIPIGVLGGGFEEVVEEETEDCAVEIEAAP-ENQAAATGSAVEASNPNGLPGTDAERWCYNIANGQGSGAARSIETLIYVLIFVAIAIGAWQTVD---GHEDD----FSTIESLTVYAFTLEYVVRLIGVGADPAFARSGRASGVV-SRLAYVVSFYSVIDLLAILPYYVALALPESLIDQYDEYLRMARILRLLKLDK 880          
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: A0A7S0FML1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FML1_9STRA)

HSP 1 Score: 180 bits (457), Expect = 4.860e-48
Identity = 116/288 (40.28%), Postives = 168/288 (58.33%), Query Frame = 1
Query:   61 LRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEI-------DDAVEADAAAVENAMDGA----ERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKV--STTVDEYDXXXXXXXXXXXXKMDK 885
            +R NVDIL ++GF A+V+ VF S  +Y  ERNNPDP+MA +Y ++P++MWV+LLNLSGE+PLC+Y++ GK++TG++G  A  +F IP+G++GAG+E  IEEI       DD       A +    G+    +  + +A P+ TA A+       G   +     FEG++   I L+V   I+QT       ED     L  +E +AV+ FT EY LR + + +DP+  G  G     R+ FI SFY +ID L++ P+YLA       VD +D       XXXXXK+DK
Sbjct:    1 MRMNVDILVMTGFAALVVWVFFSAALYITERNNPDPEMAGFYKTVPDSMWVSLLNLSGESPLCNYSVLGKILTGIIGLFATALFGIPIGILGAGFEEVIEEITEETPDEDDGTNGSNKASDRGFSGSGVDSDPLLASAPPSSTAEALYKFTNGLGSAAS---LWFEGMIYILICLTVFIGIIQTIK---GQED----TLGSVEFVAVVIFTIEYILRFIGSAADPEFSGI-GNSFLRRLRFIVSFYSIIDLLAIVPFYLALALPGGWVDAHDEYFRMLRXXXXXKLDK 277          
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: A0A1E7ER54_9STRA (Putative ion membrane transporter n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER54_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.650e-47
Identity = 113/302 (37.42%), Postives = 166/302 (54.97%), Query Frame = 1
Query:   22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEI---DDAVEADAAAVENAMDGAE-RAVGAAKPAGTAPAVE-WALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLV-------GSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKV--STTVDEYDXXXXXXXXXXXXKMDK 885
            E+YT AF+ FDDV   N D+L V+ F +V++ V  S ++Y  E+NNPD +M++ Y+++PN+MW+TLLNLSGEAPL  Y++WGK+ TG+LG  A  +F IP+G++GAG+E  +EE    DD   A  A      D A  R  G+A  + +A  VE W      G  +   +  E L+   I ++++  ILQT       E++       IE   V  FT EY +R + A +DP          GS      +R+ ++FSFY +ID L++ PYY+A V      D+YD            K+DK
Sbjct:  562 EKYTHAFTSFDDVFTRNYDVLCVTFFSSVLLWVLFSAILYITEQNNPDHEMSSNYSNMPNSMWMTLLNLSGEAPLAQYSVWGKIATGILGLFATAIFGIPIGILGAGFEEVVEEETEDDDRETAPEATKTQQRDVASTRGGGSASTSASATDVERWCYNLVNGYGSALAQAVETLIYILIFVAISIGILQTVK---GHEND----FSGIEAFTVYAFTLEYVIRFIGAGADPSFSSSGITTPGSIMNGFVSRIKYVFSFYSIIDLLAILPYYVALVLPEGLADQYDEYLRMARIIRLLKLDK 856          
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: K0S063_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S063_THAOC)

HSP 1 Score: 179 bits (455), Expect = 2.980e-47
Identity = 108/290 (37.24%), Postives = 163/290 (56.21%), Query Frame = 1
Query:   22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEIDDAVEADAAAVENAMDGAERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKV--STTVDEYDXXXXXXXXXXXXKMDK 885
            E+Y+RAF+ FDDV+RE+  +LA++ F A+++ +F ++++Y+ ER NPD +MA  Y +IP++MW+TLLNLSGE PL  Y++ GK++ GV+G  A  +F +P+GL+GAG+E  +EE          A+E+  D    A+  A   G             G  +   R FE  +   I ++V   I+QT        +     L  +E LAV+ FT EY +RL+ A +DP+   S G    +RV F  SFY VID L++ PYYLA     + VD++D            K+DK
Sbjct:  467 EKYSRAFTTFDDVIREHAGVLAITLFSAILVWIFFASILYFTERGNPDEEMAYNYRTIPDSMWITLLNLSGECPLGHYSVVGKVLIGVIGLFATAIFGVPIGLLGAGFEEMVEE----------AIEDTPDEERTALPHASVTGLGATERACYEFVNGIGSKAARWFEISIYLLIGVTVTIGIVQTV-------EGHETWLSSVESLAVVVFTAEYAIRLVGAGADPEFASSNGFV--SRVRFFLSFYSVIDLLAIVPYYLAVALPGSWVDDHDGYFRMLRLMRLLKLDK 737          
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: B7FUF5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUF5_PHATC)

HSP 1 Score: 179 bits (454), Expect = 4.110e-47
Identity = 110/281 (39.15%), Postives = 161/281 (57.30%), Query Frame = 1
Query:   22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIE-EIDDAVEA------DAAAVENAMDGAERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKV--STTVDEYD 837
            ERYT AF+ FDDVL  N D+LAV+ F A++  VF    +Y+ ER+NPD +MA+ Y ++PNAMW+TLLNL+GE+PL  Y+M GK+ TGVLG  A GVF IP+G++GAG+E  +E E +D  E          + EN     E+A               A     G  +   + FE ++   I L+VA  + QT       ++   + ++W    AVI FT EY +RL+ A +DPD     G    +R+ F+ SFY +ID L++ P+Y+A    ++ V++YD
Sbjct:  525 ERYTHAFTSFDDVLARNKDVLAVTAFTAILFWVFFGAFLYFTERDNPDEEMASNYNTVPNAMWITLLNLAGESPLSQYSMAGKVATGVLGLFATGVFGIPIGVLGAGFEEVVEQENEDNTEELEFQDHSTRSTENLGISVEQA---------------AYNFVNGNGSTAAQYFEKMIYVLIFLAVAVGVWQTLE----GQENTFSEVEW---GAVIIFTAEYLIRLIGAGADPDFAKGCG-VVQSRLRFLISFYSIIDLLAIIPFYVAFALPNSIVNDYD 782          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN88_ECTSI6.040e-7246.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CDK7_9STRA5.560e-6848.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XN37_9STRA3.760e-5538.49Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S1VPC1_9STRA8.540e-5440.37Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
L1IZZ6_GUITC1.840e-5142.37Uncharacterized protein n=3 Tax=Guillardia theta T... [more]
A0A448Z0F0_9STRA3.020e-5141.55Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S0FML1_9STRA4.860e-4840.28Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A1E7ER54_9STRA1.650e-4737.42Putative ion membrane transporter n=1 Tax=Fragilar... [more]
K0S063_THAOC2.980e-4737.24Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B7FUF5_PHATC4.110e-4739.15Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1400contigP-wetherbeei_contig1400:5566..7141 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FN88
PFAMsIon_trans,Ion_trans_2,Methyltransf_25,Ras,Voltage_CLC
Model size885
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
Exons4
Evalue9.9e-73
EggNOG OGsCOG2126@1|root,KOG1419@2759|Eukaryota,KOG3713@2759|Eukaryota
Descriptionvoltage-gated potassium channel activity
Cds size885
COG categoryJ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186005.1269166-CDS-P-wetherbeei_contig1400:5565..56891683186005.1269166-CDS-P-wetherbeei_contig1400:5565..5689Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1400 5566..5689 +
1683186005.137762-CDS-P-wetherbeei_contig1400:5996..60811683186005.137762-CDS-P-wetherbeei_contig1400:5996..6081Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1400 5997..6081 +
1683186005.1468556-CDS-P-wetherbeei_contig1400:6396..66831683186005.1468556-CDS-P-wetherbeei_contig1400:6396..6683Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1400 6397..6683 +
1683186005.1555893-CDS-P-wetherbeei_contig1400:6752..71411683186005.1555893-CDS-P-wetherbeei_contig1400:6752..7141Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1400 6753..7141 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1400.2.1prot_P-wetherbeei_contig1400.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1400 5566..7141 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1400.2.1

>prot_P-wetherbeei_contig1400.2.1 ID=prot_P-wetherbeei_contig1400.2.1|Name=mRNA_P-wetherbeei_contig1400.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=295bp
MENNTQVERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAE
RNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVA
VGVFAIPVGLIGAGYEAWIEEIDDAVEADAAAVENAMDGAERAVGAAKPA
GTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPS
EDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAF
IFSFYGVIDALSVFPYYLAKVSTTVDEYDDYLRLLRLLRLLKMDK
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mRNA from alignment at P-wetherbeei_contig1400:5566..7141+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1400.2.1 ID=mRNA_P-wetherbeei_contig1400.2.1|Name=mRNA_P-wetherbeei_contig1400.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1576bp|location=Sequence derived from alignment at P-wetherbeei_contig1400:5566..7141+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAAATAATACGCAGGTGGAGCGCTACACGCGGGCGTTCAGCGTGTT TGACGACGTGCTGCGGGAGAACGTCGACATTCTCGCCGTGTCGGGCTTCA TGGCTGTCGTCATCCTGGTTTTCGGTGGGAACAGTGAAGAGGGACCGGTT GGCGGCTGGCGGAGGGAAGAGGGCTTACTGACCGATGCGAGGCGCGCTGC CTGCTTTTTGGCATTTGGAGTCTATGTTCTTCCTGAACCATCGTGCTGGG GCCTGACACTTCTGCCTTTCCTGCTATAATTCTAGGAAGATGTGATGGCA GTTTTTTTTGTTGATTATATAATGCCGCGTATTTTAATGATGGGCGGTCG GTTGCTCATGGCTTGCCGCCTGTCGGACTCGAATCTTGCACCACACTCTG CTACTGTCAACGTCGACGGTGGGGCTGGCAGCGTCGACGCTGATGTACTA CGCGGAGCGCAACAACCCCGACCCTGACATGGCCGCCTACTATACGTCCA TCCCCAACGCCATGTGGTGAGGAAAGCAGCAGGGAGCATGCATTGACTGG TGGGCATCAAAGCAGCAGACCCGTTGCCGATTTTACTCGGAGAGCCTAGT GTTTCGGCGAGTACGAGCTGCGCTGTACTCGCTCAGAACCGCTTGGAGTG AGCGGGTCTTTGGGACGTAGTGGTCAGAGAGGGGATGTGGCTGTGTTGCT ACCACCATTACTCACCGCCTTCTGAACCGTTCGTTTCTCCCTTTTTCACA AGATGTTTCACCGAAGTGCCGCCGTGGCCGATTCTTCGCCGCGGGCGCTC TTCCGCTGCCGTCCCCGCCATCCCATTCCAGGGTCACGCTTCTCAACCTG TCAGGGGAGGCGCCCCTCTGCGACTACACCATGTGGGGCAAGCTCATCAC GGGAGTCCTCGGCTGCGTCGCCGTCGGCGTCTTCGCCATCCCTGTCGGCC TCATCGGCGCCGGCTACGAGGCCTGGATCGAAGAGATTGATGATGCGGTC GAGGCAGACGCCGCGGCTGTCGAGAACGCCATGGATGGCGCGGAGCGGGC GGTTGGCGCCGCCAAGCCCGCCGGCACCGCCCCGGCGGTCGAGTGGGCGC TGCCGCCGGCGGGCGGCGGTAACGGCGGTGGCAATGGCGGCGGGTCTGGC CTGGCGTGGCGGGACCGGCTGTTCGCTTTCGTGACAGGGAGAACACCACA CGGACGGACCTTCGAGGGCCTGGTACTGTTCGCCATTGTCCTTTCGGTAG CCGACGCCATCCTGCAGACGGCCACGGTCCTCTGCCCGTCTGAGGACGAG TGCCCGGCCGTGTTGGACTGGATCGAGTTGCTTGCTGTCATCTTCTTCAC CTTTGAATATTTTCTCCGGCTGCTGGCGGCGCCCTCCGACCCCGACCTGG TCGGTTCCTGGGGCGGCTGCTGCTGGGCGCGGGTGGCGTTCATCTTCTCG TTCTATGGCGTGATCGACGCGCTGTCGGTGTTTCCCTATTACCTAGCGAA GGTGTCAACGACAGTGGACGAGTACGACGACTACCTGCGCCTGCTGCGGC TGCTGCGGCTGCTCAAGATGGACAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1400:5566..7141+

>mRNA_P-wetherbeei_contig1400.2.1 ID=mRNA_P-wetherbeei_contig1400.2.1|Name=mRNA_P-wetherbeei_contig1400.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=885bp|location=Sequence derived from alignment at P-wetherbeei_contig1400:5566..7141+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAAATAATACGCAGGTGGAGCGCTACACGCGGGCGTTCAGCGTGTT
TGACGACGTGCTGCGGGAGAACGTCGACATTCTCGCCGTGTCGGGCTTCA
TGGCTGTCGTCATCCTGGTTTTCGCGTCGACGCTGATGTACTACGCGGAG
CGCAACAACCCCGACCCTGACATGGCCGCCTACTATACGTCCATCCCCAA
CGCCATGTGGGTCACGCTTCTCAACCTGTCAGGGGAGGCGCCCCTCTGCG
ACTACACCATGTGGGGCAAGCTCATCACGGGAGTCCTCGGCTGCGTCGCC
GTCGGCGTCTTCGCCATCCCTGTCGGCCTCATCGGCGCCGGCTACGAGGC
CTGGATCGAAGAGATTGATGATGCGGTCGAGGCAGACGCCGCGGCTGTCG
AGAACGCCATGGATGGCGCGGAGCGGGCGGTTGGCGCCGCCAAGCCCGCC
GGCACCGCCCCGGCGGTCGAGTGGGCGCTGCCGCCGGCGGGCGGCGGGAG
AACACCACACGGACGGACCTTCGAGGGCCTGGTACTGTTCGCCATTGTCC
TTTCGGTAGCCGACGCCATCCTGCAGACGGCCACGGTCCTCTGCCCGTCT
GAGGACGAGTGCCCGGCCGTGTTGGACTGGATCGAGTTGCTTGCTGTCAT
CTTCTTCACCTTTGAATATTTTCTCCGGCTGCTGGCGGCGCCCTCCGACC
CCGACCTGGTCGGTTCCTGGGGCGGCTGCTGCTGGGCGCGGGTGGCGTTC
ATCTTCTCGTTCTATGGCGTGATCGACGCGCTGTCGGTGTTTCCCTATTA
CCTAGCGAAGGTGTCAACGACAGTGGACGAGTACGACGACTACCTGCGCC
TGCTGCGGCTGCTGCGGCTGCTCAAGATGGACAAG
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