mRNA_P-wetherbeei_contig1400.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: D7FN88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN88_ECTSI) HSP 1 Score: 250 bits (638), Expect = 6.040e-72 Identity = 134/287 (46.69%), Postives = 179/287 (62.37%), Query Frame = 1
Query: 16 QVERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEIDDAVEAD------------AAAVENAMDGAERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSD-PDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKVSTTVDEYD 837
++ERY RAF VFDD +R+ DILAVSGF A+V VFAS+L+YY E PDP+M YY S+P AMWVT+LNL+GEAPLCDYT+WGK+ITG LG VGVFA+PVGL+GAG++ ++E D E D A+ N+ G + G ++ + L RT GR FE ++F I ++V IL T +C E+ CP V D +EL+AV+ FT EY R+ AAP P+ C AR+ ++ SFY +ID L++FPYY+A++S VDEYD
Sbjct: 475 KLERYVRAFEVFDDAIRDQHDILAVSGFFALVAWVFASSLLYYTESEGPDPNMTPYYQSVPMAMWVTMLNLAGEAPLCDYTVWGKIITGALGIFGVGVFAVPVGLLGAGFQEYVEAFPDKEEQDTHKGNLPIRAGLASGTSNSSAGERGSPGGSRQKPLRKRLHAFLE----ARTTWGRRFEAFIMFVIFVTVTQVILMTMPSVCEDENHCPTVFDNVELVAVVIFTLEYAARVYAAPEAYPEK-----SACMARLRYMVSFYAMIDFLAIFPYYVAQMSARVDEYD 752
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: A0A836CDK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK7_9STRA) HSP 1 Score: 239 bits (609), Expect = 5.560e-68 Identity = 149/309 (48.22%), Postives = 197/309 (63.75%), Query Frame = 1
Query: 22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEIDDAVEADAAAVENAMDGAERAVG--------AAKPAGTA--PAVEWALPPAG-----GGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPA------VLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKVSTTVDEYDXXXXXXXXXXXXKMDK 885
ERY RAF+VFDD+ R+N+D+LAV+GF AVV+ VFASTLMYYAER+NPD DM YYTS NAMW+TLLNL+GEAPL DYT+ GKLIT V+GC+AVGVFA+P GL+ AG+ W+E+ + +E +A E A A+ VG ++ P G A P ++ P G +P GR F ++ I++++ I T +CPS+ C + D +E+ AV FT EY LRL +AP P + G W R+ ++ SF+ IDAL++ P+YL +DEYDXXXXXXXXXXXX MDK
Sbjct: 462 ERYVRAFTVFDDIFRDNLDVLAVTGFAAVVLWVFASTLMYYAERDNPDEDMRKYYTSALNAMWMTLLNLTGEAPLADYTIAGKLITAVIGCLAVGVFAVPTGLVAAGFSDWVEDQQEKIEEEAK--EAAEGEAQLQVGQLQVEGGGSSAPLGAALDPEIDHTTPRHRVYVFVEGLSPLGRKFNIAIIALILITIFQTIFMTVDSICPSDQHCMGDSMGLGIFDLMEMFAVAVFTIEYILRLYSAPELPQ----YRGRSWPRLQYVASFWATIDALAILPFYLIYFFPVLDEYDXXXXXXXXXXXXXMDK 764
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: A0A7S2XN37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XN37_9STRA) HSP 1 Score: 198 bits (504), Expect = 3.760e-55 Identity = 117/304 (38.49%), Postives = 168/304 (55.26%), Query Frame = 1
Query: 22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEIDDAVEADAAAV--------------ENAMDGAERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKV--STTVDEYDXXXXXXXXXXXXKMDK 885
E+YT+AF+ FDDV+R N+D+ AV+GF A ++ VF ++YY ER+NPDP+MA+YY ++PNAMWVTLLNLSGE+PLC Y++WGK+ TG++G A GVF IP+G++G+G+E + E D D AA EN ++ G V + G + FE + I+++V I QT + L+WI AV FT EY LR + AP+DP+ S A V ++FSFY V+D L++ P+YLA + + VD +D K+DK
Sbjct: 336 EKYTKAFTTFDDVIRLNMDVFAVTGFTAFILWVFFGAILYYTERDNPDPEMASYYNTVPNAMWVTLLNLSGESPLCQYSIWGKVATGIIGLFASGVFGIPIGVLGSGFEEIVVESTDDTPDDEAATGTPNSDVLALSKEDENGLEEETHHRG-----NYIQRVCYQF--VNGQGSKMAMNFELSIYVLILITVTVGIFQTVE----GHENSFHQLEWI---AVAVFTIEYLLRTIGAPADPEFRSSGSNPVVATVRYLFSFYSVVDLLAIVPFYLAIIMPGSWVDNHDEYLRMFRLLRLIKLDK 625
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: A0A7S1VPC1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VPC1_9STRA) HSP 1 Score: 198 bits (504), Expect = 8.540e-54 Identity = 109/270 (40.37%), Postives = 164/270 (60.74%), Query Frame = 1
Query: 22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEIDDAVEADAAAVENAMDGAERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKVSTTVDE 831
E+YT AF FDDV+ +N+D+LAV+GF A+++ VF + ++Y+ ER+NPD +MAA Y ++PNAMW+TLLNL+GE+PL Y++WGK+ITGVLG A G+F IP+G++GAG+E + E ++ E + A E A D A G+ + G + G+ FE + I+LS+A I QT ED+ + L+W +++ FT E+ +R + AP+DP G + R+ FIFSFY +ID ++ P+Y A DE
Sbjct: 520 EKYTHAFRSFDDVISDNIDVLAVTGFTAMLVWVFFAAILYFTERDNPDEEMAANYNNVPNAMWMTLLNLTGESPLAQYSVWGKIITGVLGLFATGLFGIPIGVLGAGFEEVVAEENEDDEDELNAEELARD--------ATADGSNSVEKACYLFVNGAGSKAGQYFEIFIYILILLSIAVGIWQTVD---GHEDDFGS-LEW---FSIVVFTIEFLIRFIGAPADPLFGGPESNGLFTRIRFIFSFYSIIDLFAILPFYYAIAFPAADE 774
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: L1IZZ6_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1IZZ6_GUITC) HSP 1 Score: 191 bits (485), Expect = 1.840e-51 Identity = 125/295 (42.37%), Postives = 173/295 (58.64%), Query Frame = 1
Query: 16 QVERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPD---PDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEIDDAVEADAAAVENAMDGAERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKV--STTVDEYDXXXXXXXXXXXXKMDK 885
++E Y + F++FDD+L N D+LAVSGF A V+ +F S++MY ERNNP PD YY SIP+AMW TLLNL GE PLCDY+ GK+I+GV+G +AVG FAIP+G++G G+E W E + DA+ + + E + P ++ GRT G FE ++ + I +V ++T L E +LD IEL++V FT EY LRL++AP DP + + R+ FIFSFY +ID L++ PYY + + VD+YD XXXXXX MDK
Sbjct: 278 KLESYVKVFTIFDDILLNNRDVLAVSGFAATVLWIFFSSVMYLLERNNPKLVAPDGKHYYASIPDAMWPTLLNLCGEVPLCDYSPLGKVISGVMGVLAVGTFAIPIGILGNGFEEWATERYSKKDEDASQQQESHSQEESFL--------FPIRQFVE-----GRTLLGSIFEQILFYLIFATVFQQSMET---LPDFSKEHKHLLDHIELISVCIFTIEYILRLISAPLDP----LFSSKRFPRMRFIFSFYAIIDFLTIAPYYWSLLFPGGLVDKYDEALRMLXXXXXXXMDK 552
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: A0A448Z0F0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0F0_9STRA) HSP 1 Score: 191 bits (485), Expect = 3.020e-51 Identity = 123/296 (41.55%), Postives = 168/296 (56.76%), Query Frame = 1
Query: 22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEI--DDAVEADAAAVENAMDGAERAVGAAKPAGT--APAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLV--GSWGGCCWARVAFIFSFYGVIDALSVFPYY--LAKVSTTVDEYDXXXXXXXXXXXXKMDK 885
E+YT AF+ FDDV N D+L+V+ F +V++ VF L+Y ER+NPDP+MAA Y S+PNAMW+TLLNLSGEAPL Y++ GK+ TG+LG A +F IP+G++G G+E +EE D AVE +AA EN AV A+ P G A W A G + R+ E L+ I +++A QT ED+ IE L V FT EY +RL+ +DP G G +R+A++ SFY VID L++ PYY LA + +D+YD K+DK
Sbjct: 594 EKYTHAFTSFDDVFSRNYDVLSVTFFSSVLLWVFFGALLYATERDNPDPEMAANYNSVPNAMWMTLLNLSGEAPLAQYSVVGKIATGILGLFATAIFGIPIGVLGGGFEEVVEEETEDCAVEIEAAP-ENQAAATGSAVEASNPNGLPGTDAERWCYNIANGQGSGAARSIETLIYVLIFVAIAIGAWQTVD---GHEDD----FSTIESLTVYAFTLEYVVRLIGVGADPAFARSGRASGVV-SRLAYVVSFYSVIDLLAILPYYVALALPESLIDQYDEYLRMARILRLLKLDK 880
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: A0A7S0FML1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FML1_9STRA) HSP 1 Score: 180 bits (457), Expect = 4.860e-48 Identity = 116/288 (40.28%), Postives = 168/288 (58.33%), Query Frame = 1
Query: 61 LRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEI-------DDAVEADAAAVENAMDGA----ERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKV--STTVDEYDXXXXXXXXXXXXKMDK 885
+R NVDIL ++GF A+V+ VF S +Y ERNNPDP+MA +Y ++P++MWV+LLNLSGE+PLC+Y++ GK++TG++G A +F IP+G++GAG+E IEEI DD A + G+ + + +A P+ TA A+ G + FEG++ I L+V I+QT ED L +E +AV+ FT EY LR + + +DP+ G G R+ FI SFY +ID L++ P+YLA VD +D XXXXXK+DK
Sbjct: 1 MRMNVDILVMTGFAALVVWVFFSAALYITERNNPDPEMAGFYKTVPDSMWVSLLNLSGESPLCNYSVLGKILTGIIGLFATALFGIPIGILGAGFEEVIEEITEETPDEDDGTNGSNKASDRGFSGSGVDSDPLLASAPPSSTAEALYKFTNGLGSAAS---LWFEGMIYILICLTVFIGIIQTIK---GQED----TLGSVEFVAVVIFTIEYILRFIGSAADPEFSGI-GNSFLRRLRFIVSFYSIIDLLAIVPFYLALALPGGWVDAHDEYFRMLRXXXXXKLDK 277
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: A0A1E7ER54_9STRA (Putative ion membrane transporter n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER54_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.650e-47 Identity = 113/302 (37.42%), Postives = 166/302 (54.97%), Query Frame = 1
Query: 22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEI---DDAVEADAAAVENAMDGAE-RAVGAAKPAGTAPAVE-WALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLV-------GSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKV--STTVDEYDXXXXXXXXXXXXKMDK 885
E+YT AF+ FDDV N D+L V+ F +V++ V S ++Y E+NNPD +M++ Y+++PN+MW+TLLNLSGEAPL Y++WGK+ TG+LG A +F IP+G++GAG+E +EE DD A A D A R G+A + +A VE W G + + E L+ I ++++ ILQT E++ IE V FT EY +R + A +DP GS +R+ ++FSFY +ID L++ PYY+A V D+YD K+DK
Sbjct: 562 EKYTHAFTSFDDVFTRNYDVLCVTFFSSVLLWVLFSAILYITEQNNPDHEMSSNYSNMPNSMWMTLLNLSGEAPLAQYSVWGKIATGILGLFATAIFGIPIGILGAGFEEVVEEETEDDDRETAPEATKTQQRDVASTRGGGSASTSASATDVERWCYNLVNGYGSALAQAVETLIYILIFVAISIGILQTVK---GHEND----FSGIEAFTVYAFTLEYVIRFIGAGADPSFSSSGITTPGSIMNGFVSRIKYVFSFYSIIDLLAILPYYVALVLPEGLADQYDEYLRMARIIRLLKLDK 856
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: K0S063_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S063_THAOC) HSP 1 Score: 179 bits (455), Expect = 2.980e-47 Identity = 108/290 (37.24%), Postives = 163/290 (56.21%), Query Frame = 1
Query: 22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIEEIDDAVEADAAAVENAMDGAERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKV--STTVDEYDXXXXXXXXXXXXKMDK 885
E+Y+RAF+ FDDV+RE+ +LA++ F A+++ +F ++++Y+ ER NPD +MA Y +IP++MW+TLLNLSGE PL Y++ GK++ GV+G A +F +P+GL+GAG+E +EE A+E+ D A+ A G G + R FE + I ++V I+QT + L +E LAV+ FT EY +RL+ A +DP+ S G +RV F SFY VID L++ PYYLA + VD++D K+DK
Sbjct: 467 EKYSRAFTTFDDVIREHAGVLAITLFSAILVWIFFASILYFTERGNPDEEMAYNYRTIPDSMWITLLNLSGECPLGHYSVVGKVLIGVIGLFATAIFGVPIGLLGAGFEEMVEE----------AIEDTPDEERTALPHASVTGLGATERACYEFVNGIGSKAARWFEISIYLLIGVTVTIGIVQTV-------EGHETWLSSVESLAVVVFTAEYAIRLVGAGADPEFASSNGFV--SRVRFFLSFYSVIDLLAIVPYYLAVALPGSWVDDHDGYFRMLRLMRLLKLDK 737
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Match: B7FUF5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUF5_PHATC) HSP 1 Score: 179 bits (454), Expect = 4.110e-47 Identity = 110/281 (39.15%), Postives = 161/281 (57.30%), Query Frame = 1
Query: 22 ERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAERNNPDPDMAAYYTSIPNAMWVTLLNLSGEAPLCDYTMWGKLITGVLGCVAVGVFAIPVGLIGAGYEAWIE-EIDDAVEA------DAAAVENAMDGAERAVGAAKPAGTAPAVEWALPPAGGGRTPHGRTFEGLVLFAIVLSVADAILQTATVLCPSEDECPAVLDWIELLAVIFFTFEYFLRLLAAPSDPDLVGSWGGCCWARVAFIFSFYGVIDALSVFPYYLAKV--STTVDEYD 837
ERYT AF+ FDDVL N D+LAV+ F A++ VF +Y+ ER+NPD +MA+ Y ++PNAMW+TLLNL+GE+PL Y+M GK+ TGVLG A GVF IP+G++GAG+E +E E +D E + EN E+A A G + + FE ++ I L+VA + QT ++ + ++W AVI FT EY +RL+ A +DPD G +R+ F+ SFY +ID L++ P+Y+A ++ V++YD
Sbjct: 525 ERYTHAFTSFDDVLARNKDVLAVTAFTAILFWVFFGAFLYFTERDNPDEEMASNYNTVPNAMWITLLNLAGESPLSQYSMAGKVATGVLGLFATGVFGIPIGVLGAGFEEVVEQENEDNTEELEFQDHSTRSTENLGISVEQA---------------AYNFVNGNGSTAAQYFEKMIYVLIFLAVAVGVWQTLE----GQENTFSEVEW---GAVIIFTAEYLIRLIGAGADPDFAKGCG-VVQSRLRFLISFYSIIDLLAIIPFYVAFALPNSIVNDYD 782 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1400.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1400.2.1 >prot_P-wetherbeei_contig1400.2.1 ID=prot_P-wetherbeei_contig1400.2.1|Name=mRNA_P-wetherbeei_contig1400.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=295bp MENNTQVERYTRAFSVFDDVLRENVDILAVSGFMAVVILVFASTLMYYAEback to top mRNA from alignment at P-wetherbeei_contig1400:5566..7141+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1400.2.1 ID=mRNA_P-wetherbeei_contig1400.2.1|Name=mRNA_P-wetherbeei_contig1400.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1576bp|location=Sequence derived from alignment at P-wetherbeei_contig1400:5566..7141+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1400:5566..7141+ >mRNA_P-wetherbeei_contig1400.2.1 ID=mRNA_P-wetherbeei_contig1400.2.1|Name=mRNA_P-wetherbeei_contig1400.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=885bp|location=Sequence derived from alignment at P-wetherbeei_contig1400:5566..7141+ (Phaeothamnion wetherbeei SAG_119_79)back to top |