mRNA_P-wetherbeei_contig13998.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13998.1.1 vs. uniprot
Match: A0A7C4XSM0_9HYPH (Dynamin_N domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XSM0_9HYPH) HSP 1 Score: 226 bits (576), Expect = 1.250e-69 Identity = 124/274 (45.26%), Postives = 166/274 (60.58%), Query Frame = 1
Query: 19 AELHAAIQASRNRLTSRTSVSPDAARLDRLLARMQARLAAPPRVVLLGDFNSGKSTLANALIGAQALPTSIHANTRVPLHARFASHPSVSLELLDGSRTPLDERNYKHLQNGSVRMLHVAMPVSRLSTFELIDTPGLASGASRPDALVVDASKRAHVAVWCTAATQAWKATEAAAWSELPARLRPRSILVATLADALNTDRDRTRLETRLRAEAGRYFADVVMVSAAEVDALRRNPQATGHAERWVACGGAALDAALQRLLDNEWASRAISTER 840
A++ + A+ RL + S A + R + R+ RLA PPR+ LLG+FN+GKSTLAN L+G+ LPTS+HANTR P+ +A P++ +EL D SR P+ LQ G R+LHV +PV+RL FELIDTPGLASG S D + ++A R H+A+WCT +TQAWKATE W LP RL+ ILV T DA+ RDR RL RL AEA +F + MV+AA+ + N +E W GGA L+A + + A+R + ER
Sbjct: 7 AQISDELFATCRRLAAGASCDGSVASVARFVGRLGMRLARPPRIALLGEFNTGKSTLANVLMGSGVLPTSVHANTRFPVRLHYADVPALEVELSDRSRHPMSLAEVDALQRGEARLLHVGLPVTRLKKFELIDTPGLASGQSGLDDMSLEACARCHIAIWCTMSTQAWKATEKVVWRSLPKRLQSEGILVVTHKDAVRAVRDRERLAARLDAEARPHFRSLAMVAAADAERALGNGAGATQSEEWSESGGAELEALVLEAVARHLAARVGAAER 280
BLAST of mRNA_P-wetherbeei_contig13998.1.1 vs. uniprot
Match: A0A6N6SVY5_9HYPH (G domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SVY5_9HYPH) HSP 1 Score: 171 bits (433), Expect = 1.410e-48 Identity = 104/240 (43.33%), Postives = 137/240 (57.08%), Query Frame = 1
Query: 79 SPDAARLDRLLARMQARLAAPPRVVLLGDFNSGKSTLANALIGAQALPTSIHANTRVPLHARFASHPSVSLELLDGSRTPLDERNYKHLQNGSVRMLHVAMPVSRLSTFELIDTPGLASGASRPDALVVDASKRAHVAVWCTAATQAWKATEAAAWSELPARLRPRSILVATLADALNTDRDRTRLETRLRAEAGRYFADVVMVSAAEVDALRRNPQATGHAER--WVACGGAALDAALQ 792
+P A L+ R+ + PRV ++G+FNSGKS+L N L+G A+PT + P+ +A+ PS++ EL D R + VR L + +P+ RL F LIDTPG A+G DA +A +RA VA+WCT A QAWK +E AW LP RLR RSIL T DA+ + D RL RL AEAG +FA VVM++ A DALR P A + W A GGAA+ AAL+
Sbjct: 24 APPLAVLEHSPGRIATAASPAPRVAVVGEFNSGKSSLVNVLLGGAAVPTGYRVRSPYPVLINYAARPSLAFELGDRRRIATGWEDVARAPAQDVRRLRLGLPIDRLKAFRLIDTPGAATGDEALDARAFNACRRADVAIWCTPAVQAWKGSERQAWLALPRRLRQRSILAVTYKDAVASADDIERLGARLHAEAGPHFAGVVMIACA--DALRALPLADRARDEALWHASGGAAMAAALR 261
BLAST of mRNA_P-wetherbeei_contig13998.1.1 vs. uniprot
Match: A0A6I3KK64_9HYPH (Dynamin_N domain-containing protein n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KK64_9HYPH) HSP 1 Score: 138 bits (348), Expect = 2.290e-34 Identity = 89/214 (41.59%), Postives = 123/214 (57.48%), Query Frame = 1
Query: 109 LARMQARLAAPPRVVLLGDFNSGKSTLANALIGAQALPTSIHANTRVPLHARFASHPSVSLELLDGSRTPLDERNYKHLQNGSVRM--LHVAMPVSRLSTFELIDTPGLASGASRPDALVVDASKRAHVAVWCTAATQAWKATEAAAWSELPARLRPRSILVATLADALNTDRDRTRLETRLRAEAGRYFADVVMVSAAEVDALRRNPQATGHA 744
LARM+A LA PPRVV+LG+ NSGK+++A+ L+G LP+S+ ANTR+P+ R+A + +L + G+ L SV + L + +P RL+ FE++DTP L S + VD R +WCT AT+AW +E A WS LP R ++LVAT DAL D ++E RLRA AG F DV++VSA + RR T A
Sbjct: 36 LARMEAVLARPPRVVILGEVNSGKTSVADLLLGVGLLPSSVVANTRLPVLIRYAE--TTTLHAIGGNTRLLLTNEDLDALPASVELKALEIGLPSERLTEFEILDTPAL----SEAGGMNVDGDIR----IWCTVATRAWTESERAFWSALPRRSWRNALLVATHKDALEDPGDALKIEWRLRAGAGDMFRDVILVSAIDAGKSRRTNGRTSDA 239
BLAST of mRNA_P-wetherbeei_contig13998.1.1 vs. uniprot
Match: V5SJK2_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SJK2_9HYPH) HSP 1 Score: 137 bits (345), Expect = 4.640e-34 Identity = 83/227 (36.56%), Postives = 129/227 (56.83%), Query Frame = 1
Query: 19 AELHAAIQASRNRLTSRTSVSPDAARLDRLLARMQARLAAPPRVVLLGDFNSGKSTLANALIGAQALPTSIHANTRVPLHARFASHPSVSLELLDGSRTPLDERNYKHLQNGSVRMLHVAMPVSRLSTFELIDTPGLASGASRPDALVVDASKRAHVAVWCTAATQAWKATEAAAWSELPARLRPRSILVATLADALNTDRDRTRLETRLRAEAGRYFADVVMVSAA 699
A+L +Q +R RL + P A +AR++ LA P RVV+LG++NSGK+++A+ LIG LPTS+ +NT++P+ +A P++ + G+ +D R + S L VA+P+ RL F+++DTP + +PD V DA + +WCT AT+AW +E A WS LP R R ++LV T +ALN + + + RLR F DV+++ AA
Sbjct: 6 AQLIRRLQDARTRLAATKIEDPALAICVAGMARLEEVLARPLRVVILGEYNSGKTSVADLLIGNGLLPTSVVSNTKLPVLITYAKTPALHGVDVRGALVRIDSRGADAPMDASYEALQVALPLERLQGFQILDTPSMV----KPDTFVRDAD----IVIWCTVATRAWTESERATWSALPKRCRRNAMLVVTHKNALNGEEEARHVTERLREVTQGLFRDVLLIDAA 224
BLAST of mRNA_P-wetherbeei_contig13998.1.1 vs. uniprot
Match: A0A3N5NHL3_9HYPH (Dynamin_N domain-containing protein (Fragment) n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5NHL3_9HYPH) HSP 1 Score: 131 bits (329), Expect = 6.340e-34 Identity = 77/176 (43.75%), Postives = 106/176 (60.23%), Query Frame = 1
Query: 97 LDRLLARMQARLAAPPRVVLLGDFNSGKSTLANALIGAQALPTSIHANTRVPLHARFASHPSVSLELLDGSRTPLDERNYKHLQNGSVRMLHVAMPVSRLSTFELIDTPGLAS-----GASRPDALVVDASKRAHVAVWCTAATQAWKATEAAAWSELPARLRPRSILVATLADAL 609
L R R++ARLA P RV + G+FNSGKS+LAN L+G ++LPT++ A+TR+P +A+ P + L G R L +R + L ++R L V +P RL +ID PGLA G + P L +D + +WCT ATQAWK +E AAW LPARLR R++L+ T D L
Sbjct: 22 LVRAFGRLEARLARPLRVAIAGEFNSGKSSLANLLLGIESLPTAVVASTRIPTLLYYAAVPEIWAIRLGGQRERLRDR--RDLSERAIRRLEVGLPSPRLRKIHIIDLPGLADPRFDRGPADPFLLNMD------LLLWCTVATQAWKESERAAWERLPARLRARALLIVTHGDLL 189
BLAST of mRNA_P-wetherbeei_contig13998.1.1 vs. uniprot
Match: A0A1X7BTM1_9RHOB (GTPase Era n=1 Tax=Roseovarius aestuarii TaxID=475083 RepID=A0A1X7BTM1_9RHOB) HSP 1 Score: 132 bits (332), Expect = 1.300e-31 Identity = 87/227 (38.33%), Postives = 130/227 (57.27%), Query Frame = 1
Query: 136 APPRVVLLGDFNSGKSTLANALIGAQALPTSIHANTRVPLHARFASHPSVSLELLDGSRTP--LDERNYKHLQNGSVRMLHVAMPVSRLSTFELIDTPGLASGASRPDALVVDASKRAHVAVWCTAATQAWKATEAAAWSELPARLRPRSILVATLADALNTDRDRTRLETRLRAEAGRYFADVVMVSAAEVDALRRNPQATGHAERWVACGGAALDAALQRLLDNE 810
A P + LLG+F++GK+TL N L+G LPT + A P+ + SH S +D +D + + L +VR + + L +F+LIDTPG+ S + P+ A + A + +WCT ATQAW+A+E +AW ++P L+ RSIL+AT +D L+ R+R R++ RL EAG F D++M SA + A + NP A+ E+ GG AL A L RL + E
Sbjct: 25 AKPCIALLGEFSAGKTTLINFLVGRDILPTKVTATQVPPV---WLSHGDASPYYVDSDNNEHTVDLADIQSLDVSTVRYIKIYAQSEFLESFDLIDTPGI-SDPNIPEFHRDTALENADIIIWCTHATQAWRASENSAWGQVPQALQERSILLATRSDKLDA-RNRERVKRRLTHEAGSLFGDIIMFSAVDALAGKENPDASDLLEQ---SGGTALLATLTRLAEQE 243
BLAST of mRNA_P-wetherbeei_contig13998.1.1 vs. uniprot
Match: UPI00039D80E1 (hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI00039D80E1) HSP 1 Score: 128 bits (321), Expect = 1.330e-30 Identity = 81/212 (38.21%), Postives = 122/212 (57.55%), Query Frame = 1
Query: 109 LARMQARLAAPPRVVLLGDFNSGKSTLANALIGAQALPTSIHANTRVPLHARFASHPSVSLELLDGSRTPLDERNYKHLQNGSVRMLHVAMPVSRLSTFELIDTPGLASGASRPDALVVDASKRAHVAVWCTAATQAWKATEAAAWSELPARLRPRSILVATLADALNTDRDRTRLETRLRAEAGRYFADVVMVSAAEVDALRRNPQATGHA 744
L+R++ L P RVV+LG++NSGK+++A+ LIGA LPTS+ ANT+VP+ +A S+ G+R +D L + + R + VA+P+ L +++DTP AS P A + DA + +WCT AT+AW +E A W+ LP R ++LVAT D+L+ + T + RLRA F D+V+V+A R+ A GHA
Sbjct: 36 LSRIEEALRRPVRVVILGEYNSGKTSVADLLIGAGLLPTSVVANTQVPVLMTYAETASMFGVTEAGTRIRVDGDENDPLTDIAFRAIQVALPLEHLRRLQILDTPSAAS----PAAFIEDAD----IVIWCTVATRAWTESERALWASLPPRCCRNALLVATHKDSLHLAEEVTSVTERLRAMTTGLFRDIVLVAAEG----GRDDGAAGHA 235
BLAST of mRNA_P-wetherbeei_contig13998.1.1 vs. uniprot
Match: A0A397QE83_9HYPH (50S ribosome-binding GTPase n=1 Tax=Dichotomicrobium thermohalophilum TaxID=933063 RepID=A0A397QE83_9HYPH) HSP 1 Score: 124 bits (311), Expect = 4.510e-29 Identity = 77/207 (37.20%), Postives = 112/207 (54.11%), Query Frame = 1
Query: 82 PDAARLDRLLARMQARLAAPPRVVLLGDFNSGKSTLANALIGAQALPTSIHANTRVPLHARFASHPSVSLELLDGSRTPLDERNYKHLQNGSVRMLHVAMPVSRLSTFELIDTPGLAS---GASRPDALVVDASKRAHVAVWCTAATQAWKATEAAAWSELPARLRPRSILVATLADALNTDRDRTRLETRLRAEAGRYFADVVMVS 693
P A R L R++ L PPRV + G+FNSGK++L N LIG +ALPTS+ + R R+A P + +G R L ++ L + + +P RL +E+IDT G++ G P A+ H AVWCT A+QAWK +E + W +P +R RS+LV T DA+ +DR ++ R+R+EA F VM+S
Sbjct: 33 PRVASAIRGLQRIETSLGRPPRVGIFGEFNSGKTSLTNILIGRKALPTSVVTSDRGSTLLRYADQPELYAIGAEGGRHRLTTAAFQKLI-ARPALTEIGVPFPRLRNYEIIDTVGVSDPSLGGLPPKRA---ANSYVHGAVWCTVASQAWKRSEVSQWRTIPESVRKRSLLVVTHLDAVPNPQDREKIAERIRSEAANLFHGFVMIS 235
BLAST of mRNA_P-wetherbeei_contig13998.1.1 vs. uniprot
Match: A0A0D6JFK2_9HYPH (Dynamin_N domain-containing protein n=2 Tax=Filomicrobium TaxID=119044 RepID=A0A0D6JFK2_9HYPH) HSP 1 Score: 121 bits (304), Expect = 5.400e-29 Identity = 92/255 (36.08%), Postives = 134/255 (52.55%), Query Frame = 1
Query: 37 IQASRNRLTSRTSVSPDAARLDRLLARMQARLAAPPRVVLLGDFNSGKSTLANALIGAQALPTSIHANTRVPLHARFASHPSVSLELLDGSRT--PLDERNYKHLQNGSVRMLHVAMPVSRLSTFELIDTPGLASGASRPDALVVDASKRAHVAVWCTAATQAWKATEAAAWSELPARLRPRSILVATLADALNTDRDRTRLETRLRAEAGRYFADVVMVSAAEVDALRRNPQATGHAERWVACGGAALDAALQR 795
I+A+R +L+ D + L R+ L P VV++G+ NSGK+++AN LI + LP ++ ANT +P+ +A+ SV++ D R PLD L++ +V + V +P RL +F+LIDTP + D + + +WCT AT+AW TE E PAR R S+LVAT ADAL+ + + R+ RL F+ VV+VSAAE D L Q GHA +A A LD + R
Sbjct: 12 IEAARRQLSLPVCDVADLSFTRLALERLADALRRVPCVVVMGEVNSGKTSVANRLIASSVLPAAVIANTAIPVRLHYATSVSVAMLTADDRRVIDPLDP--VLDLEDFNVEAIEVGLPEPRLKSFDLIDTPSKGDLTALAD--------ESDILIWCTNATRAWTETERRKVMEFPARFRRSSVLVATHADALSAE-ECDRVLERLNEATADLFSTVVLVSAAE-DVLPPL-QVAGHASPQIAALQARLDFLISR 253
BLAST of mRNA_P-wetherbeei_contig13998.1.1 vs. uniprot
Match: A0A7Y5CWT4_HYPSQ (Dynamin_N domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y5CWT4_HYPSQ) HSP 1 Score: 120 bits (300), Expect = 9.900e-29 Identity = 72/194 (37.11%), Postives = 104/194 (53.61%), Query Frame = 1
Query: 103 RLLARMQARLAAPPRVVLLGDFNSGKSTLANALIGAQALPTSIHANTRVPLHARFASHPSVSLELLDGSRTPLDERNYKHLQNGSVRMLHVAMPVSRLSTFELIDTPGLASGASRPDALVVDASKRAHVAVWCTAATQAWKATEAAAWSELPARLRPRSILVATLADALNTDRDRTRLETRLRAEAGRYFADVV 684
R + R+ P V+LLG+ NSGK+T+AN L+ LPTS+ NTR P+ R+ + V G + P+ + ++ + +L ++MP RL FE++DTPGL S + + + +WCT+ATQAWK +E AW L LR R +L T D + RTRL TRLR EAG +F +V
Sbjct: 32 RAIKRLYRLADKPACVILLGEPNSGKTTVANTLLAGGTLPTSVIPNTRYPVLLRYGNLVGVIGHTTSGLKLPIT--SVDDIRGQQLALLEISMPNPRLRDFEIVDTPGLFELGSIEGRADISPLR---IPIWCTSATQAWKESERRAWMRLHPALRRRGMLAVTRLDLIPDPAQRTRLITRLRTEAGPHFRQIV 220 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13998.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13998.1.1 >prot_P-wetherbeei_contig13998.1.1 ID=prot_P-wetherbeei_contig13998.1.1|Name=mRNA_P-wetherbeei_contig13998.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=280bp MIPPPVAELHAAIQASRNRLTSRTSVSPDAARLDRLLARMQARLAAPPRVback to top mRNA from alignment at P-wetherbeei_contig13998:359..1198- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13998.1.1 ID=mRNA_P-wetherbeei_contig13998.1.1|Name=mRNA_P-wetherbeei_contig13998.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=840bp|location=Sequence derived from alignment at P-wetherbeei_contig13998:359..1198- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13998:359..1198- >mRNA_P-wetherbeei_contig13998.1.1 ID=mRNA_P-wetherbeei_contig13998.1.1|Name=mRNA_P-wetherbeei_contig13998.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=840bp|location=Sequence derived from alignment at P-wetherbeei_contig13998:359..1198- (Phaeothamnion wetherbeei SAG_119_79)back to top |