mRNA_P-wetherbeei_contig13973.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13973.1.1
Unique NamemRNA_P-wetherbeei_contig13973.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13973.1.1 vs. uniprot
Match: A0A2T6CZE4_9BACT (Bac_transf domain-containing protein n=1 Tax=Opitutus sp. ER46 TaxID=2161864 RepID=A0A2T6CZE4_9BACT)

HSP 1 Score: 300 bits (767), Expect = 9.500e-98
Identity = 137/167 (82.04%), Postives = 151/167 (90.42%), Query Frame = 1
Query:    1 LAALIKRESPRGPALFRQTRIGADHRPFTLYKLRSMAPDAAATDSAQQSTARDDPRLLRIGAFLRRWNLDELPQYWNVLRGDMSLVGPRPERPHHVDHLAHAIPHYQPRHVVKPGMTGWAQVNGLRGDTDLAARAQHDIYYIENWSVWLDVQILLLTFVRWRHPNAY 501
            LA LIKRESP GP  FRQTR+GA+HRPFTL+KLRSM P+A A D+ +QSTAR DPRLLRIGAF+R WNLDELPQ+WNVLRGDMSLVGPRPERP+HVD LA AIPHY PRH+VKPGMTGWAQ+NGLRGDTDL+AR QHDIYYIENWSVWLD+QI+LLTFVRWR P AY
Sbjct:  332 LALLIKRESPGGPVFFRQTRVGANHRPFTLWKLRSMVPEAPAADAQRQSTARHDPRLLRIGAFMRAWNLDELPQFWNVLRGDMSLVGPRPERPYHVDQLAGAIPHYLPRHIVKPGMTGWAQINGLRGDTDLSARVQHDIYYIENWSVWLDLQIVLLTFVRWRSPQAY 498          
BLAST of mRNA_P-wetherbeei_contig13973.1.1 vs. uniprot
Match: B1ZVX2_OPITP (Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Opitutus terrae (strain DSM 11246 / JCM 15787 / PB90-1) TaxID=452637 RepID=B1ZVX2_OPITP)

HSP 1 Score: 292 bits (747), Expect = 6.420e-95
Identity = 137/166 (82.53%), Postives = 146/166 (87.95%), Query Frame = 1
Query:    1 LAALIKRESPRGPALFRQTRIGADHRPFTLYKLRSMAPDAAATDSAQQSTARDDPRLLRIGAFLRRWNLDELPQYWNVLRGDMSLVGPRPERPHHVDHLAHAIPHYQPRHVVKPGMTGWAQVNGLRGDTDLAARAQHDIYYIENWSVWLDVQILLLTFVRWRHPNA 498
            LA LIKR+SP GP LFRQ RIGADH+PFTLYKLRSM PDA A+DSA QST   DPRLL IGAFLRRWNLDELPQ+WNVLRGDMSLVGPRPERP+HVD LA  I HY PRH+VKPGMTGWAQVNGLRGDTDLAAR QHDIYYIENWS+WLDVQILLLT +RWR P+ 
Sbjct:  317 LAMLIKRQSPGGPVLFRQQRIGADHQPFTLYKLRSMQPDADASDSAHQSTGPHDPRLLPIGAFLRRWNLDELPQFWNVLRGDMSLVGPRPERPYHVDQLARTISHYLPRHLVKPGMTGWAQVNGLRGDTDLAARVQHDIYYIENWSLWLDVQILLLTLIRWRSPDG 482          
BLAST of mRNA_P-wetherbeei_contig13973.1.1 vs. uniprot
Match: A0A1V6DIN8_9BACT (UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase n=1 Tax=Verrucomicrobia bacterium ADurb.Bin122 TaxID=1852929 RepID=A0A1V6DIN8_9BACT)

HSP 1 Score: 277 bits (709), Expect = 9.260e-92
Identity = 130/165 (78.79%), Postives = 142/165 (86.06%), Query Frame = 1
Query:    1 LAALIKRESPRGPALFRQTRIGADHRPFTLYKLRSMAPDAAATDSAQQSTARDDPRLLRIGAFLRRWNLDELPQYWNVLRGDMSLVGPRPERPHHVDHLAHAIPHYQPRHVVKPGMTGWAQVNGLRGDTDLAARAQHDIYYIENWSVWLDVQILLLTFVRWRHPN 495
            LAALIKRESP GP  FRQ R+GA HR FTLYKLRSM PDAAA+DSA  STAR D RLL IGA++RRWNLDELPQ+WNVLRGDMSLVGPRPERP+HVD LA  IPHY PRH++KPGM+GWAQVNGLRGD  L  R QHDIYYIENWS WLDVQILL+TFVRWR+ +
Sbjct:  123 LAALIKRESPAGPVFFRQERVGAGHRTFTLYKLRSMHPDAAASDSASVSTARGDARLLGIGAWMRRWNLDELPQFWNVLRGDMSLVGPRPERPYHVDRLAETIPHYLPRHLIKPGMSGWAQVNGLRGDCSLERRIQHDIYYIENWSFWLDVQILLMTFVRWRNRS 287          
BLAST of mRNA_P-wetherbeei_contig13973.1.1 vs. uniprot
Match: UPI001C811E1E (sugar transferase n=1 Tax=Opitutus sp. WL0086 TaxID=2866162 RepID=UPI001C811E1E)

HSP 1 Score: 273 bits (699), Expect = 7.810e-88
Identity = 127/162 (78.40%), Postives = 142/162 (87.65%), Query Frame = 1
Query:    1 LAALIKRESPRGPALFRQTRIGADHRPFTLYKLRSMAPDAAATDSAQQSTARDDPRLLRIGAFLRRWNLDELPQYWNVLRGDMSLVGPRPERPHHVDHLAHAIPHYQPRHVVKPGMTGWAQVNGLRGDTDLAARAQHDIYYIENWSVWLDVQILLLTFVRWR 486
            LA LIKRESP+G  LFRQTRIGADHRPFTLYKLRSM PDAA +DS  QST + D R+LR+GAF+RRWNLDELPQYWNVLRG MSLVGPRPERPHHV+ LA  IPHY PRH+VKPGMTGWAQVNGLRG TDLA R ++DI+YIENWS+W D+QI+ LTF+RWR
Sbjct:  306 LAWLIKRESPQGDILFRQTRIGADHRPFTLYKLRSMHPDAAKSDSTHQSTRQGDTRVLRVGAFMRRWNLDELPQYWNVLRGQMSLVGPRPERPHHVEQLAERIPHYLPRHLVKPGMTGWAQVNGLRGATDLAERIRYDIFYIENWSLWFDLQIIGLTFLRWR 467          
BLAST of mRNA_P-wetherbeei_contig13973.1.1 vs. uniprot
Match: A0A4Q1C557_9BACT (Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Oleiharenicola lentus TaxID=2508720 RepID=A0A4Q1C557_9BACT)

HSP 1 Score: 272 bits (695), Expect = 3.210e-87
Identity = 127/163 (77.91%), Postives = 141/163 (86.50%), Query Frame = 1
Query:    1 LAALIKRESPRGPALFRQTRIGADHRPFTLYKLRSMAPDAAATDSAQQSTARDDPRLLRIGAFLRRWNLDELPQYWNVLRGDMSLVGPRPERPHHVDHLAHAIPHYQPRHVVKPGMTGWAQVNGLRGDTDLAARAQHDIYYIENWSVWLDVQILLLTFVRWRH 489
            LAALIK ESPRGP  FRQTRIGA H+ FTLYKLRSM PDA A+D   QST ++D RLLRIG ++RRWNLDELPQYWNVL GDMSLVGPRPERPHHV+ L+  IPHY PRH+VKPGMTGWAQVNGLRGDTDLA R ++DI+YIENWS+W D QILLLTFVRWR+
Sbjct:  308 LAALIKAESPRGPVFFRQTRIGAGHQEFTLYKLRSMRPDAEASDHLNQSTQKNDARLLRIGGWMRRWNLDELPQYWNVLCGDMSLVGPRPERPHHVEQLSAVIPHYLPRHLVKPGMTGWAQVNGLRGDTDLAERIRYDIFYIENWSLWFDGQILLLTFVRWRN 470          
BLAST of mRNA_P-wetherbeei_contig13973.1.1 vs. uniprot
Match: A0A1D8AUJ8_9BACT (UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase n=1 Tax=Lacunisphaera limnophila TaxID=1838286 RepID=A0A1D8AUJ8_9BACT)

HSP 1 Score: 271 bits (693), Expect = 5.920e-87
Identity = 126/165 (76.36%), Postives = 139/165 (84.24%), Query Frame = 1
Query:    1 LAALIKRESPRGPALFRQTRIGADHRPFTLYKLRSMAPDAAATDSAQQSTARDDPRLLRIGAFLRRWNLDELPQYWNVLRGDMSLVGPRPERPHHVDHLAHAIPHYQPRHVVKPGMTGWAQVNGLRGDTDLAARAQHDIYYIENWSVWLDVQILLLTFVRWRHPN 495
            LA LIKRESP GP  F Q R+GA HR FTLYKLRSM PDAAA+D A  ST R DPRLLRIGA++RRWNLDELPQYWNVL GDMSLVGPRPERPHHV  L+  IPHY PRH+VKPGMTGWAQ+NGLRG++DL  R Q+DIYYIENWS WLD+QIL LTFVRW++P 
Sbjct:  305 LAVLIKRESPGGPVFFAQPRVGAGHRVFTLYKLRSMLPDAAASDGAAVSTPRHDPRLLRIGAWMRRWNLDELPQYWNVLCGDMSLVGPRPERPHHVAQLSAVIPHYLPRHLVKPGMTGWAQINGLRGESDLVRRIQYDIYYIENWSPWLDLQILALTFVRWKNPE 469          
BLAST of mRNA_P-wetherbeei_contig13973.1.1 vs. uniprot
Match: UPI0019B1E5AC (Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Opitutaceae bacterium TaxID=2006848 RepID=UPI0019B1E5AC)

HSP 1 Score: 258 bits (658), Expect = 1.120e-81
Identity = 121/164 (73.78%), Postives = 133/164 (81.10%), Query Frame = 1
Query:    1 LAALIKRESPRGPALFRQTRIGADHRPFTLYKLRSMAPDAAATDSAQQSTARDDPRLLRIGAFLRRWNLDELPQYWNVLRGDMSLVGPRPERPHHVDHLAHAIPHYQPRHVVKPGMTGWAQVNGLRGDTDLAARAQHDIYYIENWSVWLDVQILLLTFVRWRHP 492
            LA LIKRESP GP  F Q R+G+  R FTL+KLRSM+PDAAA+D    ST   D RLLRIGA LRRWNLDELPQ+WNVLRG+MSLVGPRPERPHHV+ L+  IPHY PRH+VKPGMTGWAQ+NGLRG  DLA R QHDIYYIENWS WLD+QI  LT  RWRHP
Sbjct:  306 LALLIKRESPGGPVFFSQIRMGSGGRHFTLWKLRSMSPDAAASDHLSVSTLAGDARLLRIGAMLRRWNLDELPQFWNVLRGEMSLVGPRPERPHHVEQLSTEIPHYLPRHLVKPGMTGWAQINGLRGGHDLARRIQHDIYYIENWSPWLDLQIFALTLTRWRHP 469          
BLAST of mRNA_P-wetherbeei_contig13973.1.1 vs. uniprot
Match: A0A3M1GSM4_9BACT (Sugar transferase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3M1GSM4_9BACT)

HSP 1 Score: 245 bits (625), Expect = 5.020e-76
Identity = 115/164 (70.12%), Postives = 133/164 (81.10%), Query Frame = 1
Query:    4 AALIKRESPRGPALFRQTRIGADHRPFTLYKLRSMAPDAAATDSAQQSTARDDPRLLRIGAFLRRWNLDELPQYWNVLRGDMSLVGPRPERPHHVDHLAHAIPHYQPRHVVKPGMTGWAQVNGLRGDTDLAARAQHDIYYIENWSVWLDVQILLLTFVRWRHPN 495
            A LI+RESP GP LFRQ RIGA+HRPFT+YKLR+M   A   D   QST  DDPR+LRIG FLRRWN+DELPQ+WNVLRGDMSLVGPRPERPHHVD L+  I HY PRH+ +PGMTGWAQ+NG RG+ DL  R + DIYY+ENWS+ LD+QIL+LTF+RWR P 
Sbjct:  372 AMLIRRESP-GPVLFRQQRIGANHRPFTMYKLRTMRLGAENEDHLHQSTTADDPRVLRIGRFLRRWNIDELPQFWNVLRGDMSLVGPRPERPHHVDALSARIRHYLPRHLARPGMTGWAQINGCRGEGDLERRIRLDIYYLENWSLALDLQILILTFLRWRGPE 534          
BLAST of mRNA_P-wetherbeei_contig13973.1.1 vs. uniprot
Match: A0A8J8APM1_9BACT (Sugar transferase n=1 Tax=Candidatus Didemnitutus sp. TaxID=2814259 RepID=A0A8J8APM1_9BACT)

HSP 1 Score: 221 bits (564), Expect = 1.410e-67
Identity = 104/167 (62.28%), Postives = 127/167 (76.05%), Query Frame = 1
Query:    1 LAALIKRESPRGPALFRQTRIGADHRPFTLYKLRSMAPDAAATDSAQQSTARDDPRLLRIGAFLRRWNLDELPQYWNVLRGDMSLVGPRPERPHHVDHLAHAIPHYQPRHVVKPGMTGWAQVNGLRGDTDLAARAQHDIYYIENWSVWLDVQILLLTFVRWRHPNAY 501
            LA L++RESP G  ++RQ R+G   RPFT+YK+RSM  DA A   A+ +  +DDPR L++GAF+R WNLDELPQ+WNVL+GDMSLVGPRPERP  +      IPHY PRH V+PG++GWAQVNGLRGDT L  R ++D+YYIENWSVW D QI+LLTF R    NAY
Sbjct:  309 LAYLVRRESP-GAVIYRQVRVGLHGRPFTIYKMRSMRLDAEAQSGARWAV-KDDPRRLKVGAFMREWNLDELPQFWNVLKGDMSLVGPRPERPELIAEFEKQIPHYNPRHTVRPGLSGWAQVNGLRGDTSLVDRVKYDLYYIENWSVWFDFQIMLLTFAR--RKNAY 471          
BLAST of mRNA_P-wetherbeei_contig13973.1.1 vs. uniprot
Match: A0A1H1SFY0_9BACT (Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Opitutus sp. GAS368 TaxID=1882749 RepID=A0A1H1SFY0_9BACT)

HSP 1 Score: 219 bits (559), Expect = 8.090e-67
Identity = 105/164 (64.02%), Postives = 124/164 (75.61%), Query Frame = 1
Query:   10 LIKRESPRGPALFRQTRIGADHRPFTLYKLRSMAPDAAATDSAQQSTARDDPRLLRIGAFLRRWNLDELPQYWNVLRGDMSLVGPRPERPHHVDHLAHAIPHYQPRHVVKPGMTGWAQVNGLRGDTDLAARAQHDIYYIENWSVWLDVQILLLTFVRWRHPNAY 501
            LI+RESP GP  ++Q R G   RPFT+ KLRSM  DA A    Q +TA D PR L+IGAF+R WNLDELPQ+WN+L+GDMSLVGPRPERP  +    H IPHY PRH V+PG+TGWAQVNGLRG+T L  R ++D+YYIENWS W DVQI++LTF R R  NAY
Sbjct:  313 LIRRESP-GPVFYKQVRTGLHGRPFTIIKLRSMRADAEAASGPQWATAAD-PRRLKIGAFMREWNLDELPQFWNILKGDMSLVGPRPERPELIRQFEHEIPHYNPRHEVRPGLTGWAQVNGLRGNTSLVERIRYDLYYIENWSFWFDVQIMILTFFRRR--NAY 472          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13973.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2T6CZE4_9BACT9.500e-9882.04Bac_transf domain-containing protein n=1 Tax=Opitu... [more]
B1ZVX2_OPITP6.420e-9582.53Exopolysaccharide biosynthesis polyprenyl glycosyl... [more]
A0A1V6DIN8_9BACT9.260e-9278.79UDP-glucose:undecaprenyl-phosphate glucose-1-phosp... [more]
UPI001C811E1E7.810e-8878.40sugar transferase n=1 Tax=Opitutus sp. WL0086 TaxI... [more]
A0A4Q1C557_9BACT3.210e-8777.91Exopolysaccharide biosynthesis polyprenyl glycosyl... [more]
A0A1D8AUJ8_9BACT5.920e-8776.36UDP-glucose:undecaprenyl-phosphate glucose-1-phosp... [more]
UPI0019B1E5AC1.120e-8173.78Exopolysaccharide biosynthesis polyprenyl glycosyl... [more]
A0A3M1GSM4_9BACT5.020e-7670.12Sugar transferase n=1 Tax=Verrucomicrobia bacteriu... [more]
A0A8J8APM1_9BACT1.410e-6762.28Sugar transferase n=1 Tax=Candidatus Didemnitutus ... [more]
A0A1H1SFY0_9BACT8.090e-6764.02Undecaprenyl-phosphate glucose phosphotransferase ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13973contigP-wetherbeei_contig13973:1265..1768 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog452637.Oter_1774
PFAMsBac_transf,CoA_binding_3
Model size504
Max annot lvl74201|Verrucomicrobia
Hectar predicted targeting categorymitochondrion
Exons1
Evalue1.05e-95
EggNOG OGsCOG2148@1|root,COG2148@2|Bacteria,46UXW@74201|Verrucomicrobia,3KA2M@414999|Opitutae
DescriptionTIGRFAM exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Cds size504
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186003.969467-CDS-P-wetherbeei_contig13973:1264..17681683186003.969467-CDS-P-wetherbeei_contig13973:1264..1768Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13973 1265..1768 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13973.1.1prot_P-wetherbeei_contig13973.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13973 1265..1768 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13973.1.1

>prot_P-wetherbeei_contig13973.1.1 ID=prot_P-wetherbeei_contig13973.1.1|Name=mRNA_P-wetherbeei_contig13973.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp
LAALIKRESPRGPALFRQTRIGADHRPFTLYKLRSMAPDAAATDSAQQST
ARDDPRLLRIGAFLRRWNLDELPQYWNVLRGDMSLVGPRPERPHHVDHLA
HAIPHYQPRHVVKPGMTGWAQVNGLRGDTDLAARAQHDIYYIENWSVWLD
VQILLLTFVRWRHPNAY*
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mRNA from alignment at P-wetherbeei_contig13973:1265..1768-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13973.1.1 ID=mRNA_P-wetherbeei_contig13973.1.1|Name=mRNA_P-wetherbeei_contig13973.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig13973:1265..1768- (Phaeothamnion wetherbeei SAG_119_79)
CTCGCCGCTCTCATCAAACGCGAGTCGCCCCGCGGCCCCGCCCTCTTCCG TCAAACCCGCATCGGCGCCGACCACCGCCCCTTCACGCTCTACAAACTTC GCAGCATGGCCCCCGACGCCGCCGCGACCGACTCCGCGCAGCAAAGCACT GCGCGCGACGATCCCCGCCTCCTCCGCATCGGCGCCTTCCTGCGCCGCTG GAACCTCGACGAACTCCCCCAATATTGGAACGTCCTCCGCGGCGACATGA GCCTCGTCGGCCCCCGCCCCGAACGCCCGCACCACGTCGACCACCTCGCG CACGCGATCCCGCACTATCAACCGCGCCACGTCGTCAAACCCGGCATGAC CGGCTGGGCCCAAGTCAACGGCCTGCGCGGCGACACCGACCTCGCCGCCC GTGCGCAACACGACATTTACTATATAGAAAACTGGTCCGTGTGGTTGGAC GTCCAAATCCTCCTCCTCACCTTCGTCCGCTGGCGCCACCCCAACGCCTA CTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13973:1265..1768-

>mRNA_P-wetherbeei_contig13973.1.1 ID=mRNA_P-wetherbeei_contig13973.1.1|Name=mRNA_P-wetherbeei_contig13973.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig13973:1265..1768- (Phaeothamnion wetherbeei SAG_119_79)
CTCGCCGCTCTCATCAAACGCGAGTCGCCCCGCGGCCCCGCCCTCTTCCG
TCAAACCCGCATCGGCGCCGACCACCGCCCCTTCACGCTCTACAAACTTC
GCAGCATGGCCCCCGACGCCGCCGCGACCGACTCCGCGCAGCAAAGCACT
GCGCGCGACGATCCCCGCCTCCTCCGCATCGGCGCCTTCCTGCGCCGCTG
GAACCTCGACGAACTCCCCCAATATTGGAACGTCCTCCGCGGCGACATGA
GCCTCGTCGGCCCCCGCCCCGAACGCCCGCACCACGTCGACCACCTCGCG
CACGCGATCCCGCACTATCAACCGCGCCACGTCGTCAAACCCGGCATGAC
CGGCTGGGCCCAAGTCAACGGCCTGCGCGGCGACACCGACCTCGCCGCCC
GTGCGCAACACGACATTTACTATATAGAAAACTGGTCCGTGTGGTTGGAC
GTCCAAATCCTCCTCCTCACCTTCGTCCGCTGGCGCCACCCCAACGCCTA
CTGA
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