mRNA_P-wetherbeei_contig13972.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13972.1.1 vs. uniprot
Match: A0A0L0DXJ2_THETB (Mannosyltransferase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DXJ2_THETB) HSP 1 Score: 93.6 bits (231), Expect = 4.540e-20 Identity = 68/206 (33.01%), Postives = 95/206 (46.12%), Query Frame = 1
Query: 1 WERIMAIYGAVLATLLSPVLQSSKAKIRY---GDYVVFKHFTTGHYLTSLDGHLLNHVGGSVQQ-ITFGATNPDENSYWVIRSSNGHDPREHDGKEVKVGELIRIYHLATNLYLHSHSTASPKSIGAPPGEQQREVTA---SAHNNVQDNWTVANKEPYPFGTKWRFMHSDGAQYLHSHDRAVGVKGRSGTNEVTCCKDKNEDDFW 597
W+ I A LA + PV + R G + +H +TG+ L S H + + GS QQ +T D NS W +++ G+ +H G +K G++IR+ H+ T YLHSH SP S Q +EV+A S ++ DNW V + G K R H D YLHSH +A G EV KN +FW
Sbjct: 4 WQLIAVAIAATLALSVVPVQAEIDEEFRMVTCGSVIKLRHASTGYRLHS---HDIPYGSGSQQQSVTAHPAADDTNSLWTVKAGFGYPACKH-GDVIKSGDVIRLQHVNTKKYLHSHLHRSPLS-------QNQEVSAYGSSDQSDSGDNWIVEGAAKWLRGAKLRLKHKDTGAYLHSHRKAY-QNPIPGQLEVCGVPSKNSQNFW 197
BLAST of mRNA_P-wetherbeei_contig13972.1.1 vs. uniprot
Match: UPI001FB17302 (stromal cell-derived factor 2-like protein n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB17302) HSP 1 Score: 82.0 bits (201), Expect = 1.180e-15 Identity = 63/193 (32.64%), Postives = 89/193 (46.11%), Query Frame = 1
Query: 49 SPVLQSSKA-KIRYGDYVVFKHFTTGHYLTSLDGHLLNHVGGSVQQITFG-ATNPDENSYWVIRSSNGHDPREHDGKEVKVGELIRIYHLATNLYLHSHSTASPKS----IGAPPGEQQREVTASAHNNVQDNWTV---ANKEPYPFGTKWRFMHSDGAQYLHSHDRAVGVKGRSGTNEVTCCKDKNEDDFWV 600
+PV +S+ +I YG + H T L S H + + GS QQ G +T D NSYW++R N D G +K G IR+ H+ T +LHSH ASP S + GE + ++ D W V N + + G + R H D YLHSHD+ + G EV K+K D+ W+
Sbjct: 23 TPVSAASEGVQITYGSVIKLMHEKTKFRLHS---HDVPYGSGSGQQSVTGFSTVEDSNSYWIVR--NAADKSAKQGDSIKSGSSIRLQHMKTRKWLHSHLHASPISGNLEVSCYGGENE--------SDTGDYWKVEIEGNGKTWRQGQRVRLHHVDTGGYLHSHDKKY-TRIAGGQQEVCGVKEKKADNVWL 201
BLAST of mRNA_P-wetherbeei_contig13972.1.1 vs. uniprot
Match: A0A199UP54_ANACO (Stromal cell-derived factor 2-like protein n=4 Tax=Ananas comosus TaxID=4615 RepID=A0A199UP54_ANACO) HSP 1 Score: 81.3 bits (199), Expect = 2.470e-15 Identity = 59/192 (30.73%), Postives = 83/192 (43.23%), Query Frame = 1
Query: 46 LSPVLQSSKAKIRYGDYVVFKHFTTGHYLTSLDGHLLNHVGGSVQQITFGATNPDE-NSYWVIRSSNGHDPREHDGKEVKVGELIRIYHLATNLYLHSHSTASPKSIGAPPGEQQREVTASAHNNVQDNWTVANKEPYPFGTKWR------FMHSDGAQYLHSHDRAVGVKGRSGTNEVTCCKDKNEDDFWV 600
+S + +I YG + H T L S H + + GS QQ G N D+ NSYW++R + HD + G +K G +IR+ H+ T +LHSH ASP S EV+ + D E G WR H D YLHSHD+ + G EV ++K D+ W+
Sbjct: 27 VSAAAAAESVEITYGSVIKLMHEKTKFRLHS---HDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPT--HDSSDKQGDAIKSGTIIRLQHMKTRKWLHSHLHASPISGNL-------EVSCFGADGESDTGDYWRLEIEGSGKTWRQDQRVRLRHVDTGGYLHSHDKKY-TRIAGGQQEVCSVREKRPDNIWL 205
BLAST of mRNA_P-wetherbeei_contig13972.1.1 vs. uniprot
Match: D7U863_VITVI (Uncharacterized protein n=2 Tax=Vitis TaxID=3603 RepID=D7U863_VITVI) HSP 1 Score: 80.1 bits (196), Expect = 6.220e-15 Identity = 64/200 (32.00%), Postives = 91/200 (45.50%), Query Frame = 1
Query: 49 SPVLQSSKA-KIRYGDYVVFKHFTTGHYLTSLDGHLLNHVGGSVQQITFGATNPDE-NSYWVIRSSNGHDPREHDGKEVKVGELIRIYHLATNLYLHSHSTASPKSIGAPPGEQQREVTASAHNN-VQDNWTVANKEPYPFGTKW------RFMHSDGAQYLHSHDRAVGVKGRSGTNEVTCCKDKNEDDFWVLLLAKHL 621
SPV +S+ +I YG + H T L S H + + GS QQ N D+ NSYW++R G ++ G +K G +IR+ H+ T +LHSH ASP S G + N+ DNW + E G W R +H D YLHSHD+ + G EV +DK D+ W+ + +L
Sbjct: 24 SPVYAASQGVEITYGSTIKLMHERTRFRLHS---HDVPYGSGSGQQSVTAFPNVDDSNSYWIVRPLLGSSSKQ--GDSIKSGTIIRLQHMRTRKWLHSHLHASPIS-----GNLEVSCYGEDDNSDTGDNWRL---EIEGSGKTWKQDQRVRLLHVDTGGYLHSHDKKY-TRIAGGQQEVCGVRDKRADNVWLAVEGVYL 209
BLAST of mRNA_P-wetherbeei_contig13972.1.1 vs. uniprot
Match: UPI00064DB345 (stromal cell-derived factor 2-like protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064DB345) HSP 1 Score: 79.0 bits (193), Expect = 1.720e-14 Identity = 61/192 (31.77%), Postives = 86/192 (44.79%), Query Frame = 1
Query: 49 SPVLQSSKA-KIRYGDYVVFKHFTTGHYLTSLDGHLLNHVGGSVQQITFGATNPDE-NSYWVIRSSNGHDPREHDGKEVKVGELIRIYHLATNLYLHSHSTASPKSIGAPPGEQQREVTASAHNNVQDNWTVANKEPYPFGTKWR------FMHSDGAQYLHSHDRAVGVKGRSGTNEVTCCKDKNEDDFWV 600
+PV +S+ +I YG + H T + L S H + + GS QQ G N D+ NSYW++RS+ D G +K G +IR+ H+ T +LHSH ASP S EV+ + D E G WR H D YLHSHD+ + G EV ++K D+ W+
Sbjct: 23 APVAAASEGVQITYGSVIKLMHERTKYRLHS---HDVPYGSGSGQQSVTGFPNVDDANSYWIVRSTK--DSLAKQGDTIKGGTVIRLQHMRTRKWLHSHLHASPISSNL-------EVSCFGSDGESDTGDYWRLEIEGNGKTWRQDQRVRLHHVDTGGYLHSHDKKY-TRIAGGQQEVCGVREKRADNVWL 201
BLAST of mRNA_P-wetherbeei_contig13972.1.1 vs. uniprot
Match: A0A1Q3AW31_CEPFO (MIR domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3AW31_CEPFO) HSP 1 Score: 78.6 bits (192), Expect = 2.710e-14 Identity = 58/183 (31.69%), Postives = 86/183 (46.99%), Query Frame = 1
Query: 76 KIRYGDYVVFKHFTTGHYLTSLDGHLLNHVGGSVQQITFGATNPDE-NSYWVIRSSNGHDPREHDGKEVKVGELIRIYHLATNLYLHSHSTASPKS----IGAPPGEQQREVTASAHNNVQDNWTV---ANKEPYPFGTKWRFMHSDGAQYLHSHDRAVGVKGRSGTNEVTCCKDKNEDDFWV 600
+I YG + H T L S H + + GS QQ G N D+ NSYWV+R +G ++ G +K G +IR+ H+ T +LHSH ASP S + GEQ+ ++ D W V + + + + R H D YLHSHD+ + G EV ++K D+ W+
Sbjct: 41 EITYGAVIKLMHEKTKFRLHS---HDVPYGSGSGQQSVTGFPNVDDSNSYWVVRPESGTPLKQ--GDTIKSGTIIRLQHMKTRKWLHSHLHASPISGNLEVSCFGGEQE--------SDTGDYWRVMIEGSGKTWKQNQRIRLQHIDTGGYLHSHDKKY-TRIAGGQQEVCGVREKRADNVWL 209
BLAST of mRNA_P-wetherbeei_contig13972.1.1 vs. uniprot
Match: S8EEX8_9LAMI (Uncharacterized protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8EEX8_9LAMI) HSP 1 Score: 79.3 bits (194), Expect = 3.160e-14 Identity = 58/193 (30.05%), Postives = 89/193 (46.11%), Query Frame = 1
Query: 76 KIRYGDYVVFKHFTTGHYLTSLDGHLLNHVGGSVQQITFGATNPDE-NSYWVIRSSNGHDPREHDGKEVKVGELIRIYHLATNLYLHSHSTASPKS----IGAPPGEQQREVTASAHNNVQDNWTV---ANKEPYPFGTKWRFMHSDGAQYLHSHDRAVGVKGRSGTNEVTCCKDKNEDDFWVLLLAKHLKNF 630
+I YG + H T L S H + + GS QQ G D+ NSYW+++ + D G +K+G +IR+ H+ T +LHSH ASP S + G++Q ++ D+W + + + + K R H D A YLHSHD+ + G EV +DK D+ W+ +L F
Sbjct: 94 QITYGSVIKLMHERTKFRLHS---HDVPYGSGSGQQSVTGFQGVDDANSYWIVKPTP--DSSAKQGDPIKIGSVIRLLHMRTRKWLHSHLHASPISGNMEVSCFGGDEQ--------SDTGDHWRLEIEGSGKTWQQDQKVRLQHVDTAGYLHSHDKKYS-RIAGGQQEVCGVRDKKADNIWLAAEGVYLPVF 272
BLAST of mRNA_P-wetherbeei_contig13972.1.1 vs. uniprot
Match: A0A2G3CZD1_CAPCH (Stromal cell-derived factor 2-like protein n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G3CZD1_CAPCH) HSP 1 Score: 80.5 bits (197), Expect = 3.500e-14 Identity = 62/192 (32.29%), Postives = 86/192 (44.79%), Query Frame = 1
Query: 49 SPVLQSSKA-KIRYGDYVVFKHFTTGHYLTSLDGHLLNHVGGSVQQITFGATNPDE-NSYWVIRSSNGHDPREHDGKEVKVGELIRIYHLATNLYLHSHSTASPKSIGAPPGEQQREVTASAHNNVQDNWTVANKEPYPFGTKWR------FMHSDGAQYLHSHDRAVGVKGRSGTNEVTCCKDKNEDDFWV 600
+PV +S+ +I YG + H T L S H + + GS QQ G D+ NSYWV+RS++ G +K G +IR+ H+ T +LHSH ASP S EV+ +N D E G WR F H D YLHSHD+ + G EV ++K D+ W+
Sbjct: 213 TPVSAASEGVQITYGSTIKLMHEKTKFRLHS---HDVPYGSGSGQQSVTGFPGVDDANSYWVVRSTDS----SKQGDPIKSGSIIRLQHMKTRRWLHSHLHASPIS-------GNMEVSCFGDDNESDTGDYWRLEIEGSGKTWRQDQRIRFQHVDTGGYLHSHDKKY-TRIAGGQQEVCGVREKRADNVWL 389
BLAST of mRNA_P-wetherbeei_contig13972.1.1 vs. uniprot
Match: A0A8J5F7I7_ZINOF (MIR domain-containing protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F7I7_ZINOF) HSP 1 Score: 77.8 bits (190), Expect = 4.400e-14 Identity = 58/186 (31.18%), Postives = 84/186 (45.16%), Query Frame = 1
Query: 64 SSKAKIRYGDYVVFKHFTTGHYLTSLDGHLLNHVGGSVQQITFGATNP-DENSYWVIRSSNGHDPREHDGKEVKVGELIRIYHLATNLYLHSHSTASPKSIGAPPGEQQREVTASAHNNVQDNWTVANKEPYPFGTKW------RFMHSDGAQYLHSHDRAVGVKGRSGTNEVTCCKDKNEDDFWV 600
S +I YG + H T H L S H L + GS QQ G+ + D NSYW++R R+ G ++ G +IR+ H+ T+ +LHSH ASP S EV+ ++ D E G W R +H D YLHSH++ + G EV +DK+ D+ W+
Sbjct: 27 SDAVEITYGSVLKLMHERTKHRLHS---HDLPYGSGSGQQSVTGSPDVGDSNSYWIVRPQPDSSTRQ--GDIIENGAVIRLQHMVTHAWLHSHLYASPLSGNL-------EVSCFGGDDQSDTGDFWRLEIEGSGKTWKTNQHVRLLHVDTNGYLHSHEKKFN-RIAGGQQEVCGVRDKHRDNVWL 199
BLAST of mRNA_P-wetherbeei_contig13972.1.1 vs. uniprot
Match: A0A2Z7CEC3_9LAMI (Stromal cell-derived factor 2-like protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CEC3_9LAMI) HSP 1 Score: 77.8 bits (190), Expect = 4.560e-14 Identity = 60/192 (31.25%), Postives = 87/192 (45.31%), Query Frame = 1
Query: 49 SPVLQSSKA-KIRYGDYVVFKHFTTGHYLTSLDGHLLNHVGGSVQQITFGATNPDE-NSYWVIRSSNGHDPREHDGKEVKVGELIRIYHLATNLYLHSHSTASPKSIGAPPGEQQREVTASAHNNVQDNWTVANKEPYPFGTKWR------FMHSDGAQYLHSHDRAVGVKGRSGTNEVTCCKDKNEDDFWV 600
+PV +S+ +I YG + H T L S H + + GS QQ G N D+ NSYW++R + ++ G +K+G LIR+ H+ T +LHSH ASP S EV+ + D + E G WR H D YLHSHD+ + G EV ++K D+ W+
Sbjct: 23 TPVSAASEGVQITYGSVIKLMHERTKFRLHS---HDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPVPESNAKQ--GDTIKIGSLIRLQHMRTRKWLHSHLHASPISGNL-------EVSCFGTDGESDTGDYWSLEIEGSGKTWRQDQRVRLRHVDTGAYLHSHDKKY-TRIAGGQQEVCGVREKRADNVWL 201 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13972.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13972.1.1 >prot_P-wetherbeei_contig13972.1.1 ID=prot_P-wetherbeei_contig13972.1.1|Name=mRNA_P-wetherbeei_contig13972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=207bp MAIYGAVLATLLSPVLQSSKAKIRYGDYVVFKHFTTGHYLTSLDGHLLNHback to top mRNA from alignment at P-wetherbeei_contig13972:1..633- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13972.1.1 ID=mRNA_P-wetherbeei_contig13972.1.1|Name=mRNA_P-wetherbeei_contig13972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=633bp|location=Sequence derived from alignment at P-wetherbeei_contig13972:1..633- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13972:1..633- >mRNA_P-wetherbeei_contig13972.1.1 ID=mRNA_P-wetherbeei_contig13972.1.1|Name=mRNA_P-wetherbeei_contig13972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=621bp|location=Sequence derived from alignment at P-wetherbeei_contig13972:1..633- (Phaeothamnion wetherbeei SAG_119_79)back to top |