mRNA_P-wetherbeei_contig13971.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13971.1.1 vs. uniprot
Match: A0A836C8B8_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B8_9STRA) HSP 1 Score: 201 bits (510), Expect = 4.760e-61 Identity = 96/131 (73.28%), Postives = 106/131 (80.92%), Query Frame = 1
Query: 1 TYGVSLHEFCLQHEPLLWLAAATNFHSAYCFGLYCTVFVMSVLTLKKGLYRRNLLGLLCRYQVGQLTWTIVTICMIVAQLKFVAHNIFSGLFWFFFPCSLVIANDCFAYFCGMSMGRKLIKAPFLRISPNK 393
TYG HEF L+H LLWLA T +H+ F +YC +FV+SVLTLKKG YR YQVGQLTWTIVTICMIVAQLKFVAHNIFSGLFWFFFPCSLVI NDCFAYFCGM++GRK+IKAPFL+ISPNK
Sbjct: 64 TYGDFFHEFVLEHRELLWLAPITKWHAGVSFSMYCCIFVLSVLTLKKGFYR---------YQVGQLTWTIVTICMIVAQLKFVAHNIFSGLFWFFFPCSLVICNDCFAYFCGMTLGRKIIKAPFLKISPNK 185
BLAST of mRNA_P-wetherbeei_contig13971.1.1 vs. uniprot
Match: D7FV14_ECTSI (Phosphatidate cytidylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV14_ECTSI) HSP 1 Score: 179 bits (453), Expect = 5.410e-53 Identity = 90/131 (68.70%), Postives = 102/131 (77.86%), Query Frame = 1
Query: 1 TYGVSLHEFCLQHEPLLWLAAATNFHSAYCFGLYCTVFVMSVLTLKKGLYRRNLLGLLCRYQVGQLTWTIVTICMIVAQLKFVAHNIFSGLFWFFFPCSLVIANDCFAYFCGMSMGRKLIKAPFLRISPNK 393
TYG LHEF L+H LLWL+ T F++ F YC VFV+SVLTLKKGLY+ YQVGQLTWTIVTICMIVAQ+KFVAHNIF+G+FWFFFP SLVI ND AYFCG++ GRKLIK PFL+ISPNK
Sbjct: 32 TYGDFLHEFVLKHRALLWLSHITMFNAWLSFTAYCCVFVVSVLTLKKGLYK---------YQVGQLTWTIVTICMIVAQVKFVAHNIFNGIFWFFFPASLVICNDITAYFCGITAGRKLIKKPFLKISPNK 153
BLAST of mRNA_P-wetherbeei_contig13971.1.1 vs. uniprot
Match: A0A6H5L891_9PHAE (Phosphatidate cytidylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L891_9PHAE) HSP 1 Score: 177 bits (448), Expect = 2.710e-51 Identity = 89/131 (67.94%), Postives = 102/131 (77.86%), Query Frame = 1
Query: 1 TYGVSLHEFCLQHEPLLWLAAATNFHSAYCFGLYCTVFVMSVLTLKKGLYRRNLLGLLCRYQVGQLTWTIVTICMIVAQLKFVAHNIFSGLFWFFFPCSLVIANDCFAYFCGMSMGRKLIKAPFLRISPNK 393
TYG LHEF L+H LLWL+ T F++ F YC VFV+SVLTLKKGLY+ YQVGQLTWTIVTICMIVAQ+KFVAHNIF+G+FWFFFP SLVI ND AYFCG++ GRKLI+ PFL+ISPNK
Sbjct: 125 TYGDFLHEFVLKHRALLWLSHITMFNAWLSFIAYCCVFVVSVLTLKKGLYK---------YQVGQLTWTIVTICMIVAQVKFVAHNIFNGIFWFFFPASLVICNDITAYFCGITAGRKLIRKPFLKISPNK 246
BLAST of mRNA_P-wetherbeei_contig13971.1.1 vs. uniprot
Match: A0A7S2XX50_9STRA (Phosphatidate cytidylyltransferase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX50_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.190e-42 Identity = 73/131 (55.73%), Postives = 91/131 (69.47%), Query Frame = 1
Query: 1 TYGVSLHEFCLQHEPLLWLAAATNFHSAYCFGLYCTVFVMSVLTLKKGLYRRNLLGLLCRYQVGQLTWTIVTICMIVAQLKFVAHNIFSGLFWFFFPCSLVIANDCFAYFCGMSMGRKLIKAPFLRISPNK 393
TYG +H+F L+H + WLA T++ +A G Y VF +S+L+L+KGLYR YQV QLTWT+V + M V Q+K V HNIFSGLFWF PCS+V+ ND AY CG +GRKLIKAPFLR+SPNK
Sbjct: 9 TYGDFVHQFVLEHRRMSWLAQYTHYFNAIAMGFYAIVFCISILSLRKGLYR---------YQVSQLTWTVVILMMTVGQIKVVGHNIFSGLFWFLLPCSIVVFNDTAAYACGKLLGRKLIKAPFLRVSPNK 130
BLAST of mRNA_P-wetherbeei_contig13971.1.1 vs. uniprot
Match: A0A067CD98_SAPPC (Phosphatidate cytidylyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CD98_SAPPC) HSP 1 Score: 139 bits (350), Expect = 5.460e-37 Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = 1
Query: 4 YGVSLHEFCLQHEPLLWLAAATNFHSAYCFGLYCTVFVMSVLTLKKGLYRRNLLGLLCRYQVGQLTWTIVTICMIVAQLKFVAHNIFSGLFWFFFPCSLVIANDCFAYFCGMSMGRKLIKAPFLRISPNK 393
YG S F W+ +++HS F LY +FV SVL+LKKG Y+ YQ+GQLTWTIVT+C+IV Q+++V NIF GLFWFFFP +LV+ NDCFAYFCG G+K +K FL++SPNK
Sbjct: 115 YGDSSQAFLRADSEFGWIKWYSHYHSWVSFSLYALLFVFSVLSLKKGYYK---------YQMGQLTWTIVTLCLIVFQMRYVLDNIFQGLFWFFFPSALVVCNDCFAYFCGKLFGKKFVKTQFLKLSPNK 235
BLAST of mRNA_P-wetherbeei_contig13971.1.1 vs. uniprot
Match: A0A3R7A5D1_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7A5D1_9STRA) HSP 1 Score: 134 bits (336), Expect = 3.660e-36 Identity = 68/133 (51.13%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 4 YGVSLHEFCLQHEPLL---WLAAATNFHSAYCFGLYCTVFVMSVLTLKKGLYRRNLLGLLCRYQVGQLTWTIVTICMIVAQLKFVAHNIFSGLFWFFFPCSLVIANDCFAYFCGMSMGRKLIKAPFLRISPNK 393
YG S F L WL +H+ F LY T+FV SVL+LKKG Y+ YQ+GQLTWTIVT+C+IV Q++ + NIF GL W FFP SLV+ NDCFAYFCG G++ IKA FL++SPNK
Sbjct: 14 YGDSFQSFLRSTHTKLDFPWLRMYLQYHTWVSFSLYATLFVFSVLSLKKGYYK---------YQMGQLTWTIVTLCLIVFQMRSILDNIFKGLVWLFFPASLVVCNDCFAYFCGKLFGKRFIKAAFLKLSPNK 137
BLAST of mRNA_P-wetherbeei_contig13971.1.1 vs. uniprot
Match: A0A1V9Z6N2_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z6N2_9STRA) HSP 1 Score: 137 bits (344), Expect = 5.690e-36 Identity = 66/115 (57.39%), Postives = 84/115 (73.04%), Query Frame = 1
Query: 49 LWLAAATNFHSAYCFGLYCTVFVMSVLTLKKGLYRRNLLGLLCRYQVGQLTWTIVTICMIVAQLKFVAHNIFSGLFWFFFPCSLVIANDCFAYFCGMSMGRKLIKAPFLRISPNK 393
+W+ + +HS F LY VFV SVL+LKKG Y+ YQ+GQLTWTIVT+C+IV Q+++V +NIF GLFWFFFP +LV+ NDCFAYFCG G+K IKA FL++SPNK
Sbjct: 151 VWIRWYSRYHSWISFLLYALVFVFSVLSLKKGYYK---------YQMGQLTWTIVTLCLIVFQMRYVLNNIFQGLFWFFFPSALVVCNDCFAYFCGKLWGKKFIKANFLKLSPNK 256
BLAST of mRNA_P-wetherbeei_contig13971.1.1 vs. uniprot
Match: A0A1V9YRB8_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YRB8_9STRA) HSP 1 Score: 134 bits (337), Expect = 5.180e-35 Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 1
Query: 52 WLAAATNFHSAYCFGLYCTVFVMSVLTLKKGLYRRNLLGLLCRYQVGQLTWTIVTICMIVAQLKFVAHNIFSGLFWFFFPCSLVIANDCFAYFCGMSMGRKLIKAPFLRISPNK 393
WL +++HS F LY +FV SVL+LKKG Y+ YQ+GQLTWTIVT+C+IV Q+++V NIF GLFWFFFP +LV+ NDCFAYFCG G+K +K FL++SPNK
Sbjct: 141 WLKWYSHYHSWVSFLLYALLFVFSVLSLKKGYYK---------YQMGQLTWTIVTLCLIVFQMRYVLDNIFQGLFWFFFPSALVVCNDCFAYFCGKLWGKKFVKTQFLKLSPNK 245
BLAST of mRNA_P-wetherbeei_contig13971.1.1 vs. uniprot
Match: A0A024TU16_9STRA (Phosphatidate cytidylyltransferase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TU16_9STRA) HSP 1 Score: 134 bits (336), Expect = 6.810e-35 Identity = 68/133 (51.13%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 4 YGVSLHEFCLQHEPLL---WLAAATNFHSAYCFGLYCTVFVMSVLTLKKGLYRRNLLGLLCRYQVGQLTWTIVTICMIVAQLKFVAHNIFSGLFWFFFPCSLVIANDCFAYFCGMSMGRKLIKAPFLRISPNK 393
YG S F L WL +H+ F LY T+FV SVL+LKKG Y+ YQ+GQLTWTIVT+C+IV Q++ + NIF GL W FFP SLV+ NDCFAYFCG G++ IKA FL++SPNK
Sbjct: 120 YGDSFQSFLRSTHTKLDFPWLRMYLQYHTWVSFSLYATLFVFSVLSLKKGYYK---------YQMGQLTWTIVTLCLIVFQMRSILDNIFKGLVWLFFPASLVVCNDCFAYFCGKLFGKRFIKAAFLKLSPNK 243
BLAST of mRNA_P-wetherbeei_contig13971.1.1 vs. uniprot
Match: A0A7S3K3N3_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3N3_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.570e-34 Identity = 66/130 (50.77%), Postives = 83/130 (63.85%), Query Frame = 1
Query: 4 YGVSLHEFCLQHEPLLWLAAATNFHSAYCFGLYCTVFVMSVLTLKKGLYRRNLLGLLCRYQVGQLTWTIVTICMIVAQLKFVAHNIFSGLFWFFFPCSLVIANDCFAYFCGMSMGRKLIKAPFLRISPNK 393
YG + F HE WL T H FGLYC +F++SV TL+K + YQVGQL+WTIVT+C++V Q+KFVA+NIF GLFWF FP LVI NDC+AYF G+ GR+ I+ PF +SP K
Sbjct: 112 YGDFIKVFSHTHESAAWLVPYTRHHGIVTFGLYCLIFMISVGTLQKNSVK---------YQVGQLSWTIVTLCIVVGQMKFVANNIFDGLFWFVFPVWLVINNDCWAYFWGILFGRRFIRQPFFSLSPKK 232 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13971.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13971.1.1 >prot_P-wetherbeei_contig13971.1.1 ID=prot_P-wetherbeei_contig13971.1.1|Name=mRNA_P-wetherbeei_contig13971.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=131bp TYGVSLHEFCLQHEPLLWLAAATNFHSAYCFGLYCTVFVMSVLTLKKGLYback to top mRNA from alignment at P-wetherbeei_contig13971:542..1763- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13971.1.1 ID=mRNA_P-wetherbeei_contig13971.1.1|Name=mRNA_P-wetherbeei_contig13971.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1222bp|location=Sequence derived from alignment at P-wetherbeei_contig13971:542..1763- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13971:542..1763- >mRNA_P-wetherbeei_contig13971.1.1 ID=mRNA_P-wetherbeei_contig13971.1.1|Name=mRNA_P-wetherbeei_contig13971.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig13971:542..1763- (Phaeothamnion wetherbeei SAG_119_79)back to top |