mRNA_P-wetherbeei_contig13920.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13920.1.1
Unique NamemRNA_P-wetherbeei_contig13920.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13920.1.1 vs. uniprot
Match: A0A127EUI8_9HYPH (Chromosome partition protein Smc n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EUI8_9HYPH)

HSP 1 Score: 654 bits (1688), Expect = 3.830e-221
Identity = 392/589 (66.55%), Postives = 437/589 (74.19%), Query Frame = 1
Query:    4 NNRPARNTAEVAMQIDNSKHEAPTQFNEYDTLDVSRRIEREKGSMYRINGREVRARDVTTLFADASTGSRSPALVHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRLKAAETNLLRVEDVVKQLAGQIDALKRQARQAARYKVVAADIRKAEATLFHLRWIGANAEVADSERAMDLSVRTVADATIAQTEAGKQREVAAAAVPPLREAEASAGAALQRLINARDALDAEEARARERMAELERRLAQLHEDLARERALAADAQATLEQLATEEETLKQELQGIVHLRTGVDERVAAAEEXXXXXXXXXGELTGALADLTARRNQLTGAAREQSERIARIESEMANIEAGLAAAAESRPDLDGLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXHLETTRGPLADAERAAQRLETEAKTLMKLLAVENKNLWPPVMDAVQVAKGYEKALGAALGDELDAPVDPSSPMRWAGAALDPSDPALPAGAEALSQHVTAPPELARRLAQIGVVTRADGARLVSQLKTGQRLVSLEGDLWRWDGFAADAHAPTGAARRLAERSRLADIDGELLTARAELETRRANVEAA 1770
            NNRP RNTAEVA+Q+DN KHEAP QFNE+DTLD+SRRIEREKGS+YRINGREVRARDV TLFADASTGSRSPALVHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRLKAAE NLLRVEDVVKQL+GQID LKRQARQA RY+ ++A++RK EATL++LRW+GANAEV +S+RA DLSVRTVA+ATIAQTEAG  RE AA AVPPLR+ EA AGAALQRLI ARDALDAEE RARER+AEL+RRLAQ   D+ RERAL ADA+     LA EEETL++                     XXXXXXXXX                                        GL AA ESRPD+  L  +                           +LE  R PLA+AERA QRL+TEAKTLMKLLAVE +++WPPV+D++ V KGYE ALGAALGD+LDAPVD S  MRWAGAA+DPSDP LP G E L++HV APPELARRL QIGVV  ADGARL + LK GQRLVS +GDLWRWDGFAADAHAPTGAARRLA+RSRLADIDGEL  ARA +E +RA+VE A
Sbjct:   70 NNRPPRNTAEVAIQMDNDKHEAPAQFNEHDTLDISRRIEREKGSLYRINGREVRARDVMTLFADASTGSRSPALVHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRLKAAEANLLRVEDVVKQLSGQIDGLKRQARQAIRYRNLSAEVRKVEATLYYLRWLGANAEVLESDRAKDLSVRTVAEATIAQTEAGHAREAAAEAVPPLRDTEARAGAALQRLIMARDALDAEETRARERLAELDRRLAQFEADVMRERALVADAEXXXXXLAEEEETLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTAANESRPDVAALAESVEAAQAAVGQGEENALAAEAAHEEARKNLEAARIPLAEAERAVQRLDTEAKTLMKLLAVETQSMWPPVIDSITVNKGYEIALGAALGDDLDAPVDQSHAMRWAGAAIDPSDPTLPEGVEPLAKHVEAPPELARRLNQIGVVEAADGARLAALLKPGQRLVSRDGDLWRWDGFAADAHAPTGAARRLAQRSRLADIDGELAMARATVEVKRASVEMA 658          
BLAST of mRNA_P-wetherbeei_contig13920.1.1 vs. uniprot
Match: A0A537SZ12_9PROT (Chromosome partition protein Smc n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SZ12_9PROT)

HSP 1 Score: 631 bits (1627), Expect = 3.510e-212
Identity = 393/591 (66.50%), Postives = 461/591 (78.00%), Query Frame = 1
Query:    1 TNNRPARNTAEVAMQIDNSKHEAPTQFNEYDTLDVSRRIEREKGSMYRINGREVRARDVTTLFADASTGSRSPALVHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRLKAAETNLLRVEDVVKQLAGQIDALKRQARQAARYKVVAADIRKAEATLFHLRWIGANAEVADSERAMDLSVRTVADATIAQTEAGKQREVAAAAVPPLREAEASAGAALQRLINARDALDAEEARARERMAELERRLAQLHEDLARERALAADAQATLEQLATEEETLKQELQGIVHLRTGVDERVAAAEEXXXXXXXXXGELTGALADLTARRNQLTGAAREQSERIARIESEMANIEAGLAA-AAESRPDLDGLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXHLETTRGPLADAERAAQRLETEAKTLMKLLAVENKNLWPPVMDAVQVAKGYEKALGAALGDELDAPVDPSSPMRWAGAALDPSDPALPAGAEALSQHVTAPPELARRLAQIGVVTRADGARLVSQLKTGQRLVSLEGDLWRWDGFAADAHAPTGAARRLAERSRLADIDGELLTARAELETRRANVEAA 1770
            TNNRP RN AEVA+Q+DNS  +AP QFNE+DTLD+SRRIER+ GS YRINGREVRARDV  LFADASTGSRSP++VHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRL+AAE NL R+EDV+ QLAGQIDALKRQARQA RY+ VA  +RKAEATL HLRW+ ANAE+A++E A D SVR VA+ T  Q +A K++ +AAAA+P LREAEA A AALQRL  AR+ALD E+ARA ER+AEL+RRL Q  ED+ RER LA DAQA L ++A EEETL +E++        +D  +A +E+          ELT ALADLTARRN L GAARE S+R AR+  E+A +EA LA   AE+R DL  L+ A     XXXXXXXXXXXXXXXXXXXXXX      GPLA+AER AQRL+TEA+TL KLL V+ K LWPP +D V V KGYE ALGAALGD+L+AP+DPS+PMRWAGAA+D +DPALP G  AL++HV AP +LARRLAQIGV+ R   ARL+  LKTGQRLVS EGDLWRWDGF+  A AP GAARRLA ++RLA+I+ E    R E+E+++  V AA
Sbjct:   69 TNNRPGRNNAEVAIQLDNSARKAPAQFNEHDTLDISRRIERDAGSTYRINGREVRARDVHILFADASTGSRSPSMVHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRLRAAEQNLARLEDVINQLAGQIDALKRQARQAIRYRAVAEQVRKAEATLLHLRWLAANAELAEAEHAKDASVRIVAERTGEQADASKRQALAAAALPALREAEARAAAALQRLTMAREALDHEQARAAERVAELDRRLVQFGEDIERERRLAGDAQAALARIAAEEETLGREIK--------LDAVLARSEKSAD-------ELTAALADLTARRNALDGAAREHSDRAARLAHEIAAVEAELAQITAETRADLAPLSQAAETAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPLAEAERRAQRLDTEARTLAKLLHVDAKTLWPPALDHVSVDKGYEAALGAALGDDLEAPIDPSAPMRWAGAAIDANDPALPNGVHALAEHVKAPQQLARRLAQIGVIERDQAARLLPLLKTGQRLVSREGDLWRWDGFSVGADAPAGAARRLAGKNRLAEIEAESKAVRGEVESKQKAVTAA 644          
BLAST of mRNA_P-wetherbeei_contig13920.1.1 vs. uniprot
Match: A0A537KW00_9PROT (Chromosome partition protein Smc n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537KW00_9PROT)

HSP 1 Score: 625 bits (1613), Expect = 6.820e-210
Identity = 370/593 (62.39%), Postives = 430/593 (72.51%), Query Frame = 1
Query:    1 TNNRPARNTAEVAMQIDNSKHEAPTQFNEYDTLDVSRRIEREKGSMYRINGREVRARDVTTLFADASTGSRSPALVHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRLKAAETNLLRVEDVVKQLAGQIDALKRQARQAARYKVVAADIRKAEATLFHLRWIGANAEVADSERAMDLSVRTVADATIAQTEAGKQREVAAAAVPPLREAEASAGAALQRLINARDALDAEEARARERMAELERRLAQLHEDLARERALAADAQATLEQLATEEETLKQELQGIVHLRTGVDERVAAAEEXXXXXXXXXGELTGALADLTARRNQLTGAAREQSERIARIESEMANIEAGLAAA---AESRPDLDGLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXHLETTRGPLADAERAAQRLETEAKTLMKLLAVENKNLWPPVMDAVQVAKGYEKALGAALGDELDAPVDPSSPMRWAGAALDPSDPALPAGAEALSQHVTAPPELARRLAQIGVVTRADGARLVSQLKTGQRLVSLEGDLWRWDGFAADAHAPTGAARRLAERSRLADIDGELLTARAELETRRANVEAA 1770
            TNNRPARNTAEV + +DN+   AP QFNE++TL+VSRRIEREKGS YR+NGREVRARDV  LFADASTG+RSPALVHQGRIGEIIQAKPEQRRRVLEEAAG++GLHARRHEAELRLKAAETNL R+EDV+ QLA QIDALKRQARQA +YK V+AD+RKAEATLFHLRW+ ANAEVA++  A DLS+R VA+AT AQ EA  ++  AAA +PPLR+ EA  GAALQRL  AR+ALD EEAR  ER+ EL+RRL QL +D+ARE+   ADA+A L++LA EE  L Q+               + AE          GELTGALADL ARRNQL  A  E S R+ R+E ++  +E  LA+        PD+  L  A                            L+  R PLA+AER   RLE EAK L KL+ VE K LWPP +D + V KGYE ALGAALGD+L+APVDP+SP+RWAGAA D +DPALPAGAE L+ HVTAP ELARRLAQIGVV RA GA L +QLK GQRLVS +GDLWRWDGFAA ++APT AARRLA ++RLAD+D EL  AR E E RR  VEAA
Sbjct:   69 TNNRPARNTAEVMLFLDNADRSAPAQFNEHETLEVSRRIEREKGSAYRLNGREVRARDVQLLFADASTGARSPALVHQGRIGEIIQAKPEQRRRVLEEAAGVAGLHARRHEAELRLKAAETNLNRLEDVIGQLAQQIDALKRQARQAVKYKQVSADVRKAEATLFHLRWVAANAEVAEAGHAKDLSIRRVAEATGAQAEASTRQANAAADLPPLRDEEAKTGAALQRLTMAREALDREEARVNERIVELDRRLTQLTQDVAREQRQQADAEAALQRLAGEEAGLAQDXXXXXXXXXXXXXXXSEAEAALGTIEKTFGELTGALADLVARRNQLERAVSEHSVRLMRLEGQIGEVENELASLDRPENGAPDVVALAGAAEIAQNAVAEAEAAALRAEAGHSGARQALDVARAPLAEAERRVGRLEAEAKALAKLIDVEAKKLWPPAIDLLTVEKGYEAALGAALGDDLEAPVDPASPIRWAGAAAD-NDPALPAGAEPLAAHVTAPAELARRLAQIGVVDRALGAALAAQLKPGQRLVSRDGDLWRWDGFAAASNAPTAAARRLAAKNRLADLDAELTHARQEAEARRRAVEAA 660          
BLAST of mRNA_P-wetherbeei_contig13920.1.1 vs. uniprot
Match: SMC_RHOPA (Chromosome partition protein Smc n=15 Tax=Proteobacteria TaxID=1224 RepID=SMC_RHOPA)

HSP 1 Score: 614 bits (1584), Expect = 1.620e-205
Identity = 354/591 (59.90%), Postives = 421/591 (71.24%), Query Frame = 1
Query:    7 NRPARNTAEVAMQIDNSKHEAPTQFNEYDTLDVSRRIEREKGSMYRINGREVRARDVTTLFADASTGSRSPALVHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRLKAAETNLLRVEDVVKQLAGQIDALKRQARQAARYKVVAADIRKAEATLFHLRWIGANAEVADSERAMDLSVRTVADATIAQTEAGKQREVAAAAVPPLREAEASAGAALQRLINARDALDAEEARARERMAELERRLAQLHEDLARERALAADAQATLEQLATEEETLKQELQGIVHLRTGVDERVAAAEEXXXXXXXXXGELTGALADLTARRNQLTGAAREQSERIARIESEMANIEAG---LAAAAESRPDLDGLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXHLETTRGPLADAERAAQRLETEAKTLMKLLAVENKNLWPPVMDAVQVAKGYEKALGAALGDELDAPVDPSSPMRWAGAALDPSDPALPAGAEALSQHVTAPPELARRLAQIGVVTRADGARLVSQLKTGQRLVSLEGDLWRWDGFAADAHAPTGAARRLAERSRLADIDGELLTARAELETRRANVEAA 1770
            NRPARN AEV M IDNS   AP   N+ DTLD+SRRIERE GS+YRINGREVRARDV  LFADA+TG+RSPALVHQG+IGEIIQAKPEQRRRVLE+AAG++GLHARRHEAELRLKAAETNL RVEDV+ QL+ Q+D LK+QARQA R++ VAA +RK EA L+HLRW  A AEV  +    DL VR +A+ T  Q EA + +   A+ +P LREAEA A A LQRLINAR+ LD EEARA+ER+ ELERRL Q   D+ARE+  A DA A LE+L TE+  L++E+   V  R+GVDERVA A+           ELT  LA+LTARRNQ   + R   +R+AR+++E+ N+E+    L+A      DL  L  A                            L+ +R PL DAE+  QRLETEAKT+ K+L  E KNLWPP++D + VAKGYEKA+GA LGD+LDAPVDPS+PMRW    + P DPALP G EAL+QHVTAPPELARRLAQIGVVT+  G  L  QLKTGQRLVSL+GD+WRWDGF A AHAPTGAARRLAER+RL DI+ EL  AR E   +R  +E A
Sbjct:   71 NRPARNHAEVVMSIDNSDRTAPAALNDADTLDISRRIEREAGSVYRINGREVRARDVQLLFADAATGARSPALVHQGKIGEIIQAKPEQRRRVLEDAAGVAGLHARRHEAELRLKAAETNLTRVEDVIGQLSTQVDGLKKQARQAIRFREVAAKVRKTEAMLYHLRWRDAQAEVGAAAEVHDLGVRQLAECTRVQAEASRIQADRASTLPSLREAEARAAAGLQRLINAREQLDREEARAKERVVELERRLTQFSSDVAREQQQAIDADAALERLDTEDVELREEILERVEKRSGVDERVAEADASLGEAEQLFAELTTQLAELTARRNQFEQSVRTHRDRLARLDTEIKNVESEIDRLSAETSGAGDLTELAEAVEIAQELLAEQEGAVQEAEAAQIAARQTLDGSRAPLVDAEKKVQRLETEAKTISKILNGETKNLWPPIIDGITVAKGYEKAIGAVLGDDLDAPVDPSAPMRWTDVGVQPEDPALPEGVEALAQHVTAPPELARRLAQIGVVTKERGNELCEQLKTGQRLVSLDGDVWRWDGFVASAHAPTGAARRLAERARLTDIENELEQARIEATAKRQALETA 661          
BLAST of mRNA_P-wetherbeei_contig13920.1.1 vs. uniprot
Match: A0A0D7F245_RHOPL (Chromosome segregation protein SMC (Fragment) n=1 Tax=Rhodopseudomonas palustris TaxID=1076 RepID=A0A0D7F245_RHOPL)

HSP 1 Score: 599 bits (1545), Expect = 2.120e-205
Identity = 342/585 (58.46%), Postives = 417/585 (71.28%), Query Frame = 1
Query:    7 NRPARNTAEVAMQIDNSKHEAPTQFNEYDTLDVSRRIEREKGSMYRINGREVRARDVTTLFADASTGSRSPALVHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRLKAAETNLLRVEDVVKQLAGQIDALKRQARQAARYKVVAADIRKAEATLFHLRWIGANAEVADSERAMDLSVRTVADATIAQTEAGKQREVAAAAVPPLREAEASAGAALQRLINARDALDAEEARARERMAELERRLAQLHEDLARERALAADAQATLEQLATEEETLKQELQGIVHLRTGVDERVAAAEEXXXXXXXXXGELTGALADLTARRNQLTGAAREQSERIARIESEMANIEAG---LAAAAESRPDLDGLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXHLETTRGPLADAERAAQRLETEAKTLMKLLAVENKNLWPPVMDAVQVAKGYEKALGAALGDELDAPVDPSSPMRWAGAALDPSDPALPAGAEALSQHVTAPPELARRLAQIGVVTRADGARLVSQLKTGQRLVSLEGDLWRWDGFAADAHAPTGAARRLAERSRLADIDGELLTARAELETRR 1752
            NRP+RN AEV M IDN+ H AP   N+ + L++SRRIERE GS+YRINGR+VRARDV  LFADA+TG+RSPALVHQG+IGEIIQAKPEQRRRVLE+AAG++GLHARRHEAELRLKAAETNL RVEDV+ QL+ Q+D LK+QARQA R++ VAA +RKAEA LFHLRW+ ANAEV ++ +  DL+VR +A+ T  Q EA + +   A+ +P LREAEA A A L RL NAR+ LD EE RA+ER+ EL+RRL Q   D+ RE+  AADA   LE+L  E+  LK E++  V LR GVDERVA AE          GELT ALA LTARRNQ     R   +R+ R+++E+A ++     LA    +  DL+ L  A                            LE  RGPLA+A++  QRL+TEA+T+ KL+  E KNLWPP++D + VAKGYEKA+GAALGD+LDAPVDPS+PMRW    +   DPALP GA++L+ HV APPELARRLAQIGVV +  G  LVSQL TGQRLVSLEGD+WRWDGF A AHAPT AARRLAER+RL +I+ EL  AR E   +R
Sbjct:   71 NRPSRNHAEVVMTIDNTDHTAPAAMNDAEILEISRRIEREAGSVYRINGRDVRARDVQLLFADAATGARSPALVHQGKIGEIIQAKPEQRRRVLEDAAGVAGLHARRHEAELRLKAAETNLTRVEDVIGQLSSQVDGLKKQARQAIRFREVAAKVRKAEAMLFHLRWLEANAEVTEAAKVHDLNVRELAERTREQAEASRIQADRASTLPSLREAEARAAAGLTRLTNAREMLDREEQRAKERLGELDRRLTQFGADVEREQQHAADADVALEKLDIEDGELKDEIRQRVELRGGVDERVAEAEATLADSERLFGELTTALAQLTARRNQFEAGVRGHRDRLTRLDTEIAGVQIEIEKLAQQTSAAGDLEALAEAMETAQQTLAESEAGVQAFESAHVEARQRLEAARGPLAEADKKVQRLDTEARTISKLVNSETKNLWPPIIDGINVAKGYEKAIGAALGDDLDAPVDPSAPMRWTDIGVQADDPALPEGADSLANHVDAPPELARRLAQIGVVAKERGNELVSQLATGQRLVSLEGDVWRWDGFVAAAHAPTRAARRLAERARLVEIENELEQARVEAAAKR 655          
BLAST of mRNA_P-wetherbeei_contig13920.1.1 vs. uniprot
Match: UPI000A9BCDA5 (chromosome segregation protein SMC n=1 Tax=Bradyrhizobium jicamae TaxID=280332 RepID=UPI000A9BCDA5)

HSP 1 Score: 597 bits (1538), Expect = 1.290e-204
Identity = 345/589 (58.57%), Postives = 414/589 (70.29%), Query Frame = 1
Query:    7 NRPARNTAEVAMQIDNSKHEAPTQFNEYDTLDVSRRIEREKGSMYRINGREVRARDVTTLFADASTGSRSPALVHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRLKAAETNLLRVEDVVKQLAGQIDALKRQARQAARYKVVAADIRKAEATLFHLRWIGANAEVADSERAMDLSVRTVADATIAQTEAGKQREVAAAAVPPLREAEASAGAALQRLINARDALDAEEARARERMAELERRLAQLHEDLARERALAADAQATLEQLATEEETLKQELQGIVHLRTGVDERVAAAEEXXXXXXXXXGELTGALADLTARRNQLTGAAREQSERIARIESEMANIEAG---LAAAAESRPDLDGLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXHLETTRGPLADAERAAQRLETEAKTLMKLLAVENKNLWPPVMDAVQVAKGYEKALGAALGDELDAPVDPSSPMRWAGAALDPSDPALPAGAEALSQHVTAPPELARRLAQIGVVTRADGARLVSQLKTGQRLVSLEGDLWRWDGFAADAHAPTGAARRLAERSRLADIDGELLTARAELETRRANVE 1764
            NRPARN AEV M IDN+   AP   N+   L++SRRIERE GS+YRINGR+VRARDV  LFADA+TG+RSPALVHQG+IGEIIQAKPEQRRRVLE+AAG++GLHARRHEAELRLKAAETNL RVEDV+ QL GQ+D LK+QARQA R++ VAA +RKAEATLFHLRW+ AN +VA++    D++VR +A+ T  Q EA + + + A+ +P LRE EA A A LQRL NAR+ LD EE RA+ER +EL+RRL Q   D+ARE+   +DA+             K+E++  V  R+GVDERV+ AE          GELT ALADLTA+RNQL    R   +R+A    E+A ++A    LA    +  D+D L AA                            LE +R PL DAE+  QRLETEA+T+ KL+ VE KNLWPP++D V VAKGYEKALGA LGD+LDAPVDPS+PMRW  A     DPALPAG EAL+ HV AP ELARRLAQIGVV +  GA  VSQLKTGQRLVSLEGD+WRWDGF A AHAPTGAARRLAER+RL DI+ EL  AR +   +R  +E
Sbjct:   71 NRPARNHAEVTMTIDNADRTAPAAVNDSQVLEISRRIEREAGSVYRINGRDVRARDVQILFADAATGARSPALVHQGKIGEIIQAKPEQRRRVLEDAAGVAGLHARRHEAELRLKAAETNLTRVEDVIGQLTGQMDGLKKQARQAIRFREVAAKVRKAEATLFHLRWLEANTDVAEAAHTHDINVREMAERTREQAEAARIQAIRASELPALREGEARAAAGLQRLTNARELLDREEERAKERASELDRRLNQFIADIAREQQQTSDAEIAXXXXXXXXXXXKEEIKSRVEKRSGVDERVSEAEATLAAAESMFGELTTALADLTAKRNQLEAGVRTHRDRLAXXXQEIATVQADEEKLAQETGNLGDIDALAAAMETAQETLAASEAAAQAAETGHVAARQKLEASRAPLTDAEKRVQRLETEARTISKLVNVETKNLWPPIIDGVTVAKGYEKALGAVLGDDLDAPVDPSAPMRWTSAGASFDDPALPAGVEALASHVEAPAELARRLAQIGVVPKERGAEFVSQLKTGQRLVSLEGDVWRWDGFVAAAHAPTGAARRLAERARLVDIEHELEQARIDAAAKRQALE 659          
BLAST of mRNA_P-wetherbeei_contig13920.1.1 vs. uniprot
Match: A0A525KDC1_BRASZ (Chromosome partition protein Smc n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525KDC1_BRASZ)

HSP 1 Score: 608 bits (1567), Expect = 5.640e-203
Identity = 354/591 (59.90%), Postives = 421/591 (71.24%), Query Frame = 1
Query:    7 NRPARNTAEVAMQIDNSKHEAPTQFNEYDTLDVSRRIEREKGSMYRINGREVRARDVTTLFADASTGSRSPALVHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRLKAAETNLLRVEDVVKQLAGQIDALKRQARQAARYKVVAADIRKAEATLFHLRWIGANAEVADSERAMDLSVRTVADATIAQTEAGKQREVAAAAVPPLREAEASAGAALQRLINARDALDAEEARARERMAELERRLAQLHEDLARERALAADAQATLEQLATEEETLKQELQGIVHLRTGVDERVAAAEEXXXXXXXXXGELTGALADLTARRNQLTGAAREQSERIARIESEMANI---EAGLAAAAESRPDLDGLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXHLETTRGPLADAERAAQRLETEAKTLMKLLAVENKNLWPPVMDAVQVAKGYEKALGAALGDELDAPVDPSSPMRWAGAALDPSDPALPAGAEALSQHVTAPPELARRLAQIGVVTRADGARLVSQLKTGQRLVSLEGDLWRWDGFAADAHAPTGAARRLAERSRLADIDGELLTARAELETRRANVEAA 1770
            NRP+RN AEV M IDNS   AP+  N+ +TL++SRRIERE GS+YRINGR+VRARDV  LFADA+TG+RSPALVHQG+IGEIIQAKPEQRRRVLE+AAG++GLHARRHEAELRLKAAETNL RVEDV+ QLAGQID LK+QARQA RY+ VAA +RKAEA LFHLRW+ AN+ VA++    DLSVR +A+ T  Q EA + + V AA +P LREAE  A A LQRL NARDALD EE RARER AEL+RRL Q   D+ARE+  A+DA+  L++L  E+  LK+E++  V  R+GVDERV+ AE           ELT  LADLTA+R+QL    R   +R+AR+  ++ N+   E  LA       DL  L                               LE  R PL +A++  QRLETEA+T+ KL+  E+KNLWPP++D V VAKGYEKALGAALGD+LDAPVDPS+PMRW  A +   DPALP G E L+ HV AP ELARRLAQIGVV +  G  LVSQLKTGQRLVSLEGD+WRWDGF A AHAPTGAARRLAER+RL DI+ EL  AR E   +R  +E A
Sbjct:   71 NRPSRNHAEVVMTIDNSDRTAPSAMNDRETLEISRRIEREAGSVYRINGRDVRARDVQILFADAATGARSPALVHQGKIGEIIQAKPEQRRRVLEDAAGVAGLHARRHEAELRLKAAETNLTRVEDVIGQLAGQIDGLKKQARQAIRYREVAAKVRKAEAMLFHLRWLEANSGVAEAGHTHDLSVRDMAERTREQAEAARIQAVRAAELPALREAEVRAAAGLQRLTNARDALDREEERARERAAELDRRLMQFSADVAREQQQASDAEVALQRLDAEDSELKEEIKSRVEKRSGVDERVSEAETTLAAAERLFAELTTELADLTAKRHQLEANVRTHRDRLARLNQDIVNVGNEEQQLAQETSGLGDLASLAGMMEAAQQGLARCEAAAQGAEAAHVAARQTLEAARAPLNEADKRVQRLETEARTIAKLVNGESKNLWPPIIDGVTVAKGYEKALGAALGDDLDAPVDPSAPMRWTDAGVTEGDPALPEGVERLAAHVEAPTELARRLAQIGVVAKDRGTALVSQLKTGQRLVSLEGDVWRWDGFVAAAHAPTGAARRLAERARLVDIENELEQARIEAGNKRQALETA 661          
BLAST of mRNA_P-wetherbeei_contig13920.1.1 vs. uniprot
Match: UPI001798237B (Chromosome segregation protein SMC n=1 Tax=Rhodopseudomonas sp. TaxID=1078 RepID=UPI001798237B)

HSP 1 Score: 604 bits (1557), Expect = 1.760e-201
Identity = 347/591 (58.71%), Postives = 426/591 (72.08%), Query Frame = 1
Query:    7 NRPARNTAEVAMQIDNSKHEAPTQFNEYDTLDVSRRIEREKGSMYRINGREVRARDVTTLFADASTGSRSPALVHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRLKAAETNLLRVEDVVKQLAGQIDALKRQARQAARYKVVAADIRKAEATLFHLRWIGANAEVADSERAMDLSVRTVADATIAQTEAGKQREVAAAAVPPLREAEASAGAALQRLINARDALDAEEARARERMAELERRLAQLHEDLARERALAADAQATLEQLATEEETLKQELQGIVHLRTGVDERVAAAEEXXXXXXXXXGELTGALADLTARRNQLTGAAREQSERIARIESEMANIEAGLAAAAE---SRPDLDGLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXHLETTRGPLADAERAAQRLETEAKTLMKLLAVENKNLWPPVMDAVQVAKGYEKALGAALGDELDAPVDPSSPMRWAGAALDPSDPALPAGAEALSQHVTAPPELARRLAQIGVVTRADGARLVSQLKTGQRLVSLEGDLWRWDGFAADAHAPTGAARRLAERSRLADIDGELLTARAELETRRANVEAA 1770
            NRP+RN AEV M IDN+   AP   N+ + L++SRRIERE GS+YRINGR+VRARDV  LFADA+TG+RSPALVHQG+IGEIIQAKPEQRRRVLE+AAG++GLHARRHEAELRLKAAETNL RVEDV+ QLAGQID LK+QARQA R++ VAA +RKAEA LFHLRW+ ANAEV ++ R  DL+VR +A+ T  Q E+ + +   A+A+P LREAEA A A LQRL NAR+ LD EE RA++R+AEL+RRL Q   D+ RE+  AADA   L +L  E+  LK E++  V  R GVDERVA AE           ELT ALA LTARRNQ     R   +R+AR++SE+A +   +   A+   +  DLD LTAA                            LE+ R PL++A++  QRLETEA+T+ KL+  E+KNLWPP++D + VAKGYEKA+GAALGD+LDAPVDPS+PMRW    +   DPALP G E+L+ HVTAPPELARRLAQIGVV +  G  LV++L TGQRLVSLEGD+WRWDGF A AHAPTGAARRLAER+RL +I+ EL  AR +   +R  ++AA
Sbjct:   71 NRPSRNHAEVVMTIDNTDRTAPAAMNDAEILEISRRIEREAGSVYRINGRDVRARDVQLLFADAATGARSPALVHQGKIGEIIQAKPEQRRRVLEDAAGVAGLHARRHEAELRLKAAETNLTRVEDVIGQLAGQIDGLKKQARQAIRFREVAAKVRKAEAMLFHLRWLEANAEVVEAARIHDLNVRELAERTREQAESARIQADRASALPSLREAEARAAAGLQRLTNARETLDREEQRAKDRVAELDRRLLQFGADVEREQQHAADADVALARLEVEDTELKDEIRQRVEQRGGVDERVAEAEATLADSERLFAELTTALAQLTARRNQFEAGVRSHRDRLARLDSEIAGVLGEVDKLAQQTIAAGDLDALTAAMENAQQTLAESEAAVAAFESAHVEARQQLESARAPLSEADKRVQRLETEARTISKLVNGESKNLWPPIIDGISVAKGYEKAIGAALGDDLDAPVDPSAPMRWTDVGVQDGDPALPHGVESLATHVTAPPELARRLAQIGVVAKERGNELVAKLATGQRLVSLEGDVWRWDGFVAAAHAPTGAARRLAERARLVEIENELEQARIDAAAKRQALDAA 661          
BLAST of mRNA_P-wetherbeei_contig13920.1.1 vs. uniprot
Match: UPI00131ADC4B (chromosome segregation protein SMC n=1 Tax=Bradyrhizobium sp. S69 TaxID=1641856 RepID=UPI00131ADC4B)

HSP 1 Score: 602 bits (1551), Expect = 1.390e-200
Identity = 346/589 (58.74%), Postives = 422/589 (71.65%), Query Frame = 1
Query:    7 NRPARNTAEVAMQIDNSKHEAPTQFNEYDTLDVSRRIEREKGSMYRINGREVRARDVTTLFADASTGSRSPALVHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRLKAAETNLLRVEDVVKQLAGQIDALKRQARQAARYKVVAADIRKAEATLFHLRWIGANAEVADSERAMDLSVRTVADATIAQTEAGKQREVAAAAVPPLREAEASAGAALQRLINARDALDAEEARARERMAELERRLAQLHEDLARERALAADAQATLEQLATEEETLKQELQGIVHLRTGVDERVAAAEEXXXXXXXXXGELTGALADLTARRNQLTGAAREQSERIARIESEMANI---EAGLAAAAESRPDLDGLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXHLETTRGPLADAERAAQRLETEAKTLMKLLAVENKNLWPPVMDAVQVAKGYEKALGAALGDELDAPVDPSSPMRWAGAALDPSDPALPAGAEALSQHVTAPPELARRLAQIGVVTRADGARLVSQLKTGQRLVSLEGDLWRWDGFAADAHAPTGAARRLAERSRLADIDGELLTARAELETRRANVE 1764
            NRP+RN AEV M IDN+   AP   N+ + L++SRRIER+ GS+YRINGR+VRARDV  LFADA+TG+RSPALVHQG+IGEIIQAKPEQRRRVLE+AAG++GLHARRHEAELRLKAAE NLLRVEDVV QL+GQI+ LK+QARQA RY+ VAA +RKAEATLFHLRW+ AN++VA++ R  DLSVR +A+ T  Q EA + + + A+ +P LR+ EA A A LQRL NAR+ LD EE RA+ER+AEL+RRL Q   D+ARE+  +ADA+  L++L  E+  LK E++  V  R+GVDERV+ +E           ELT ALADLTA+R QL    R   ER+A+++ E+A +   E  LA       DL                                  LE++R PL DA+R  QRLETEA+T+ KL+  E KNLWPP++D V VAKGYEKALGAALGD+LDAPVDPS+PMRW  + +   DPALP G E+L+ HV AP ELARRLAQIGVV +  G  LVSQLKTGQRLVSLEGD+WRWDGF A AHAPTGAARRLAER+RL DI+ EL  AR E   +R  +E
Sbjct:   71 NRPSRNHAEVVMTIDNTDRTAPAAVNDREILEISRRIERDAGSVYRINGRDVRARDVQILFADAATGARSPALVHQGKIGEIIQAKPEQRRRVLEDAAGVAGLHARRHEAELRLKAAEANLLRVEDVVGQLSGQIEGLKKQARQAIRYREVAAKVRKAEATLFHLRWLEANSDVAEAGRIHDLSVREMAERTREQAEAARIQAIRASELPALRDGEARAAAGLQRLTNARETLDREEERAKERVAELDRRLTQFSADIAREQQQSADAEVALQRLDVEDTELKDEIKSRVEKRSGVDERVSESEATLADAERLFTELTTALADLTAKRRQLEAGVRTHQERVAKLDQEIAGVRTEEDKLAQETSGLGDLAEFAGIMETAQEHLAQSEASAQASEAGHVAARSKLESSRAPLNDADRRVQRLETEARTISKLVNGETKNLWPPIIDGVTVAKGYEKALGAALGDDLDAPVDPSAPMRWTNSGVTEGDPALPDGVESLASHVDAPSELARRLAQIGVVAKERGGELVSQLKTGQRLVSLEGDVWRWDGFVAAAHAPTGAARRLAERARLIDIEHELEQARGEAAAKRQALE 659          
BLAST of mRNA_P-wetherbeei_contig13920.1.1 vs. uniprot
Match: A0A346A2H3_9HYPH (Chromosome partition protein Smc n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A2H3_9HYPH)

HSP 1 Score: 600 bits (1546), Expect = 6.980e-200
Identity = 376/588 (63.95%), Postives = 444/588 (75.51%), Query Frame = 1
Query:    4 NNRPARNTAEVAMQIDNSKHEAPTQFNEYDTLDVSRRIEREKGSMYRINGREVRARDVTTLFADASTGSRSPALVHQGRIGEIIQAKPEQRRRVLEEAAGISGLHARRHEAELRLKAAETNLLRVEDVVKQLAGQIDALKRQARQAARYKVVAADIRKAEATLFHLRWIGANAEVADSERAMDLSVRTVADATIAQTEAGKQREVAAAAVPPLREAEASAGAALQRLINARDALDAEEARARERMAELERRLAQLHEDLARERALAADAQATLEQLATEEETLKQELQGIVHLRTGVDERVAAAEEXXXXXXXXXGELTGALADLTARRNQLTGAAREQSERIARIESEMANIEAGLAAA-AESRPDLDGLTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXHLETTRGPLADAERAAQRLETEAKTLMKLLAVENKNLWPPVMDAVQVAKGYEKALGAALGDELDAPVDPSSPMRWAGAALDPSDPALPAGAEALSQHVTAPPELARRLAQIGVVTRADGARLVSQLKTGQRLVSLEGDLWRWDGFAADAHAPTGAARRLAERSRLADIDGELLTARAELETRRANVE 1764
            N+RPARN AEVAM IDN    AP  FN+ D L+++RRIERE GS YRINGR+VRARDV  LFADASTG+RSPALVHQGRIGEIIQAKPEQRRRVLEEAAG++GLHARRHEAELRLKAAETNLLRVEDV+ QL  Q++ALK+QARQA RY+ V+A +RKAEATL HLRW+ A+ EV ++E+A DL VR VA  T A+ EA K++ +A+A++P LREA         R+  A   LD EE RA++R+AEL++RL Q   D  RE  L ADA+  + ++A E+ET+++E       R+G D +VA A  XXXXXXXXX            +R+QL    RE + R +RIESEM  +E  L+A  A   PDL  LTA        XXXXXXXXXXXXXXXXXXX  LE +R PLA+ ER  QRLETEAKTL K+LAV+ KNLWPPVMD+V V KGYEKALGAALGD+LDAP+DPSSPMRWAGA +DP+DPALP G EAL++HV AP EL+RRL+QIGVV RA+  R V QLK GQRLVS+EGDLWRWDGFAADAHAPTGAARRLAER+RLA+I+ EL  ARAE E  R   E
Sbjct:   70 NSRPARNNAEVAMTIDNGDRTAPAAFNDTDMLEIARRIERESGSNYRINGRDVRARDVQILFADASTGARSPALVHQGRIGEIIQAKPEQRRRVLEEAAGVAGLHARRHEAELRLKAAETNLLRVEDVIGQLTTQMEALKKQARQAVRYRTVSAQVRKAEATLHHLRWLAASFEVTEAEQAKDLGVREVAARTEAEAEASKRQALASASLPELREAXXXXXXXXHRIKLALADLDREEQRAKDRIAELDKRLFQFASDKEREERLVADAEEAIARIAAEDETIRKEAHANAGRRSGADAKVAEAXXXXXXXXXXXXXXXXXXXXXXXQRHQLENVMREHANRASRIESEMFEVERELSALQANEGPDLAELTAIVETAQAAXXXXXXXXXXXXXXXXXXXHALEASRAPLAETERRVQRLETEAKTLSKVLAVDTKNLWPPVMDSVAVDKGYEKALGAALGDDLDAPIDPSSPMRWAGATIDPTDPALPEGVEALAKHVAAPDELSRRLSQIGVVDRAEAQRFVGQLKPGQRLVSIEGDLWRWDGFAADAHAPTGAARRLAERARLAEIESELQVARAEAEAARTTTE 657          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13920.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127EUI8_9HYPH3.830e-22166.55Chromosome partition protein Smc n=1 Tax=Rhodoplan... [more]
A0A537SZ12_9PROT3.510e-21266.50Chromosome partition protein Smc n=1 Tax=Alphaprot... [more]
A0A537KW00_9PROT6.820e-21062.39Chromosome partition protein Smc n=1 Tax=Alphaprot... [more]
SMC_RHOPA1.620e-20559.90Chromosome partition protein Smc n=15 Tax=Proteoba... [more]
A0A0D7F245_RHOPL2.120e-20558.46Chromosome segregation protein SMC (Fragment) n=1 ... [more]
UPI000A9BCDA51.290e-20458.57chromosome segregation protein SMC n=1 Tax=Bradyrh... [more]
A0A525KDC1_BRASZ5.640e-20359.90Chromosome partition protein Smc n=1 Tax=Bradyrhiz... [more]
UPI001798237B1.760e-20158.71Chromosome segregation protein SMC n=1 Tax=Rhodops... [more]
UPI00131ADC4B1.390e-20058.74chromosome segregation protein SMC n=1 Tax=Bradyrh... [more]
A0A346A2H3_9HYPH6.980e-20063.95Chromosome partition protein Smc n=1 Tax=Pseudolab... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13920contigP-wetherbeei_contig13920:3..1772 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog258594.RPA4489
Preferred namesmc
PFAMsSMC_N
Model size1770
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K03529
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.94e-206
EggNOG OGsCOG1196@1|root,COG1196@2|Bacteria,1MUAQ@1224|Proteobacteria,2TRQG@28211|Alphaproteobacteria,3JUPU@41294|Bradyrhizobiaceae
DescriptionRequired for chromosome condensation and partitioning
Cds size1770
COG categoryD
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186001.99875-CDS-P-wetherbeei_contig13920:2..17721683186001.99875-CDS-P-wetherbeei_contig13920:2..1772Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13920 3..1772 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13920.1.1prot_P-wetherbeei_contig13920.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13920 3..1772 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13920.1.1

>prot_P-wetherbeei_contig13920.1.1 ID=prot_P-wetherbeei_contig13920.1.1|Name=mRNA_P-wetherbeei_contig13920.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=590bp
TNNRPARNTAEVAMQIDNSKHEAPTQFNEYDTLDVSRRIEREKGSMYRIN
GREVRARDVTTLFADASTGSRSPALVHQGRIGEIIQAKPEQRRRVLEEAA
GISGLHARRHEAELRLKAAETNLLRVEDVVKQLAGQIDALKRQARQAARY
KVVAADIRKAEATLFHLRWIGANAEVADSERAMDLSVRTVADATIAQTEA
GKQREVAAAAVPPLREAEASAGAALQRLINARDALDAEEARARERMAELE
RRLAQLHEDLARERALAADAQATLEQLATEEETLKQELQGIVHLRTGVDE
RVAAAEEVLSAADKTFGELTGALADLTARRNQLTGAAREQSERIARIESE
MANIEAGLAAAAESRPDLDGLTAALEAAQAAVTEAEQATTAAEAVQVTAR
QHLETTRGPLADAERAAQRLETEAKTLMKLLAVENKNLWPPVMDAVQVAK
GYEKALGAALGDELDAPVDPSSPMRWAGAALDPSDPALPAGAEALSQHVT
APPELARRLAQIGVVTRADGARLVSQLKTGQRLVSLEGDLWRWDGFAADA
HAPTGAARRLAERSRLADIDGELLTARAELETRRANVEAA
back to top

mRNA from alignment at P-wetherbeei_contig13920:3..1772+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13920.1.1 ID=mRNA_P-wetherbeei_contig13920.1.1|Name=mRNA_P-wetherbeei_contig13920.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1770bp|location=Sequence derived from alignment at P-wetherbeei_contig13920:3..1772+ (Phaeothamnion wetherbeei SAG_119_79)
ACCAACAACCGGCCGGCCCGCAACACCGCCGAAGTTGCGATGCAGATCGA CAACAGCAAGCACGAGGCGCCGACCCAGTTCAACGAATACGACACGCTCG ACGTGTCGCGCCGGATCGAGCGCGAAAAAGGCTCGATGTACCGCATCAAC GGCCGCGAGGTGCGCGCCCGCGATGTGACGACGCTGTTCGCCGACGCTTC GACCGGCTCGCGCTCGCCCGCGCTCGTCCATCAGGGCCGCATCGGCGAGA TCATCCAGGCCAAGCCCGAGCAGCGCCGCCGTGTCCTCGAAGAAGCCGCC GGCATTTCCGGTCTGCATGCGCGCCGGCACGAAGCCGAATTACGCCTGAA GGCAGCCGAAACCAACCTTCTGCGCGTCGAGGACGTGGTCAAACAGCTGG CCGGCCAGATTGACGCGCTCAAGCGCCAAGCCCGCCAAGCCGCCCGCTAC AAGGTCGTCGCCGCCGACATCCGCAAGGCCGAGGCGACGCTGTTCCATCT GCGCTGGATCGGCGCCAACGCCGAAGTCGCCGATTCCGAGCGCGCAATGG ACTTGAGCGTGCGCACCGTCGCCGACGCTACCATCGCGCAGACCGAGGCC GGCAAGCAGCGCGAGGTAGCCGCAGCCGCCGTGCCGCCGCTGCGCGAGGC GGAAGCCAGCGCCGGCGCTGCGCTCCAGCGCCTGATCAACGCGCGCGACG CCCTCGATGCCGAAGAAGCCCGTGCGCGCGAGCGCATGGCGGAGCTTGAG CGCCGGCTCGCACAACTGCATGAGGATCTGGCGCGCGAGCGGGCGCTCGC CGCCGACGCCCAGGCCACATTGGAACAACTCGCCACCGAGGAAGAGACGC TCAAGCAGGAACTGCAAGGGATCGTGCACCTGCGTACCGGCGTCGACGAG CGCGTCGCCGCCGCCGAAGAGGTGCTCTCCGCTGCGGACAAGACCTTCGG CGAGTTGACCGGCGCGCTTGCCGACCTCACCGCCCGCCGCAATCAATTGA CCGGCGCTGCGCGGGAACAGTCCGAGCGGATCGCCCGCATCGAAAGCGAG ATGGCCAACATCGAAGCCGGCCTCGCGGCTGCGGCCGAGAGCAGGCCCGA CCTCGACGGCCTCACGGCCGCGCTGGAAGCCGCACAAGCCGCGGTGACCG AGGCCGAACAGGCGACGACTGCGGCCGAAGCCGTGCAAGTCACCGCGCGC CAGCATCTTGAGACCACCCGCGGCCCGCTCGCCGACGCCGAGCGCGCGGC ACAGCGGCTCGAGACCGAAGCGAAGACGCTGATGAAGCTCCTCGCCGTCG AGAACAAGAATCTGTGGCCGCCAGTGATGGATGCCGTCCAAGTCGCCAAG GGCTACGAAAAGGCGTTGGGCGCGGCGCTCGGCGATGAGCTCGATGCGCC GGTCGATCCATCCTCGCCGATGCGTTGGGCGGGTGCGGCGCTCGACCCGT CCGATCCGGCGCTCCCGGCGGGGGCCGAGGCGCTGTCGCAGCATGTCACT GCGCCGCCCGAACTGGCCCGGCGCCTAGCGCAGATCGGCGTCGTGACCCG CGCCGATGGCGCGCGGCTGGTTTCGCAGCTCAAGACCGGGCAGCGCCTGG TCTCGCTCGAAGGCGACCTCTGGCGCTGGGACGGATTTGCCGCCGACGCG CACGCACCGACCGGCGCGGCGCGGCGGCTTGCCGAACGCAGCCGGCTCGC CGACATCGACGGCGAACTGCTGACCGCCCGCGCCGAGCTCGAAACCCGGC GCGCCAACGTCGAGGCGGCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig13920:3..1772+

>mRNA_P-wetherbeei_contig13920.1.1 ID=mRNA_P-wetherbeei_contig13920.1.1|Name=mRNA_P-wetherbeei_contig13920.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1770bp|location=Sequence derived from alignment at P-wetherbeei_contig13920:3..1772+ (Phaeothamnion wetherbeei SAG_119_79)
ACCAACAACCGGCCGGCCCGCAACACCGCCGAAGTTGCGATGCAGATCGA
CAACAGCAAGCACGAGGCGCCGACCCAGTTCAACGAATACGACACGCTCG
ACGTGTCGCGCCGGATCGAGCGCGAAAAAGGCTCGATGTACCGCATCAAC
GGCCGCGAGGTGCGCGCCCGCGATGTGACGACGCTGTTCGCCGACGCTTC
GACCGGCTCGCGCTCGCCCGCGCTCGTCCATCAGGGCCGCATCGGCGAGA
TCATCCAGGCCAAGCCCGAGCAGCGCCGCCGTGTCCTCGAAGAAGCCGCC
GGCATTTCCGGTCTGCATGCGCGCCGGCACGAAGCCGAATTACGCCTGAA
GGCAGCCGAAACCAACCTTCTGCGCGTCGAGGACGTGGTCAAACAGCTGG
CCGGCCAGATTGACGCGCTCAAGCGCCAAGCCCGCCAAGCCGCCCGCTAC
AAGGTCGTCGCCGCCGACATCCGCAAGGCCGAGGCGACGCTGTTCCATCT
GCGCTGGATCGGCGCCAACGCCGAAGTCGCCGATTCCGAGCGCGCAATGG
ACTTGAGCGTGCGCACCGTCGCCGACGCTACCATCGCGCAGACCGAGGCC
GGCAAGCAGCGCGAGGTAGCCGCAGCCGCCGTGCCGCCGCTGCGCGAGGC
GGAAGCCAGCGCCGGCGCTGCGCTCCAGCGCCTGATCAACGCGCGCGACG
CCCTCGATGCCGAAGAAGCCCGTGCGCGCGAGCGCATGGCGGAGCTTGAG
CGCCGGCTCGCACAACTGCATGAGGATCTGGCGCGCGAGCGGGCGCTCGC
CGCCGACGCCCAGGCCACATTGGAACAACTCGCCACCGAGGAAGAGACGC
TCAAGCAGGAACTGCAAGGGATCGTGCACCTGCGTACCGGCGTCGACGAG
CGCGTCGCCGCCGCCGAAGAGGTGCTCTCCGCTGCGGACAAGACCTTCGG
CGAGTTGACCGGCGCGCTTGCCGACCTCACCGCCCGCCGCAATCAATTGA
CCGGCGCTGCGCGGGAACAGTCCGAGCGGATCGCCCGCATCGAAAGCGAG
ATGGCCAACATCGAAGCCGGCCTCGCGGCTGCGGCCGAGAGCAGGCCCGA
CCTCGACGGCCTCACGGCCGCGCTGGAAGCCGCACAAGCCGCGGTGACCG
AGGCCGAACAGGCGACGACTGCGGCCGAAGCCGTGCAAGTCACCGCGCGC
CAGCATCTTGAGACCACCCGCGGCCCGCTCGCCGACGCCGAGCGCGCGGC
ACAGCGGCTCGAGACCGAAGCGAAGACGCTGATGAAGCTCCTCGCCGTCG
AGAACAAGAATCTGTGGCCGCCAGTGATGGATGCCGTCCAAGTCGCCAAG
GGCTACGAAAAGGCGTTGGGCGCGGCGCTCGGCGATGAGCTCGATGCGCC
GGTCGATCCATCCTCGCCGATGCGTTGGGCGGGTGCGGCGCTCGACCCGT
CCGATCCGGCGCTCCCGGCGGGGGCCGAGGCGCTGTCGCAGCATGTCACT
GCGCCGCCCGAACTGGCCCGGCGCCTAGCGCAGATCGGCGTCGTGACCCG
CGCCGATGGCGCGCGGCTGGTTTCGCAGCTCAAGACCGGGCAGCGCCTGG
TCTCGCTCGAAGGCGACCTCTGGCGCTGGGACGGATTTGCCGCCGACGCG
CACGCACCGACCGGCGCGGCGCGGCGGCTTGCCGAACGCAGCCGGCTCGC
CGACATCGACGGCGAACTGCTGACCGCCCGCGCCGAGCTCGAAACCCGGC
GCGCCAACGTCGAGGCGGCG
back to top