mRNA_P-wetherbeei_contig13904.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13904.1.1
Unique NamemRNA_P-wetherbeei_contig13904.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13904.1.1 vs. uniprot
Match: D8LQI7_ECTSI (BIG1, ArfGEF protein of the BIG/GBF family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQI7_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 1.590e-102
Identity = 175/267 (65.54%), Postives = 202/267 (75.66%), Query Frame = 1
Query:   55 QEYGRKKKLMSELESGFVRFSLSPHKGILYLESKGLLEAEPRAVARFLHDYADKLDKTQIGEYLGKEKDFKSGFCVAVLHEYVDAMDFTGMEFDNAIRHFLSGFRLPGEAQKIDRMMEKFAERYCLQNPQIFPSADTAFILAFSVIMLNTDQHNPAIKEEKRMTRDGFVRNNHGIANGQNLPEPFLHALFDRIKTNPISLKDDDYLREKLQAGGGGXXXXXXXXXXNPLLPYFGGGAGAGDRQKRQAFDKERQDMIRASKALFRQRK 855
            QEY RKKKL  +L +GFVRF+LSP KG+ YL  KG+L  EPRAVA FL +  DKLDKTQIGEYLGKE  +K GFCV VLHEYVD MDF GM FD+AIRH+LSGFRLPGEAQKIDRMMEKF+ER+CLQNP +FPSADTAFILAFS+IMLNTD HNPAIKEE++MTR+GF  NN GIA G NL E FL+ +FD I+ NPISLK+DD  REK +   G            P L           RQKR+AF+KER+DMI+ ++ALFR RK
Sbjct:  662 QEYDRKKKLAGDLGNGFVRFNLSPAKGVSYLVEKGMLVYEPRAVATFLLENCDKLDKTQIGEYLGKEIHYKDGFCVQVLHEYVDMMDFKGMRFDDAIRHYLSGFRLPGEAQKIDRMMEKFSERFCLQNPTVFPSADTAFILAFSIIMLNTDLHNPAIKEERKMTREGFAANNRGIAAGGNLEESFLNEIFDHIRANPISLKEDDQAREKGETQTGAASAFPLYFTAGPSL-----------RQKREAFNKEREDMIKDTEALFRLRK 917          
BLAST of mRNA_P-wetherbeei_contig13904.1.1 vs. uniprot
Match: A0A4D9CUH3_9STRA (SEC7 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUH3_9STRA)

HSP 1 Score: 317 bits (811), Expect = 7.040e-95
Identity = 155/267 (58.05%), Postives = 202/267 (75.66%), Query Frame = 1
Query:   55 QEYGRKKKLMSELESGFVRFSLSPHKGILYLESKGLLEAEPRAVARFLHDYADKLDKTQIGEYLGKEKDFKSGFCVAVLHEYVDAMDFTGMEFDNAIRHFLSGFRLPGEAQKIDRMMEKFAERYCLQNPQIFPSADTAFILAFSVIMLNTDQHNPAIKEEKRMTRDGFVRNNHGIANGQNLPEPFLHALFDRIKTNPISLKDDDYLREKLQAGGGGXXXXXXXXXXNPLLPYFGGGAGAGDRQKRQAFDKERQDMIRASKALFRQRK 855
            + Y RK+KL  E+  G ++F+L P +GI Y+E+ G L   P  VARFLHD+ D+LDKT IG+YLGKEKD+ S FCV VLHEYVD MD  G+EFD AIRHFL+GFRLPGEAQKIDR+MEKFAER+CLQNP +FPSADTAFIL+FS+IMLNTD HNP+++E++RMT+D F+RNN GI++G +LPE FL  ++D IK + ISLK+DD +R K  AGG G          NP          + D+++++A+ KER+ M++AS+A+FRQRK
Sbjct:  649 ESYDRKQKLQEEVSLGLLKFNLKPSQGIAYMEAHGYLRKTPAEVARFLHDHKDRLDKTVIGDYLGKEKDYDSAFCVKVLHEYVDMMDLQGLEFDQAIRHFLAGFRLPGEAQKIDRIMEKFAERFCLQNPAVFPSADTAFILSFSIIMLNTDLHNPSVREDRRMTKDDFIRNNRGISSGADLPEAFLSKIYDNIKCSAISLKEDDDMRAKRGAGGVGGGASE-----NPFFSTL-----SLDKRRKEAYQKEREAMLQASEAIFRQRK 905          
BLAST of mRNA_P-wetherbeei_contig13904.1.1 vs. uniprot
Match: A0A6H5KIY2_9PHAE (SEC7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY2_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 1.090e-90
Identity = 146/264 (55.30%), Postives = 192/264 (72.73%), Query Frame = 1
Query:   55 QEYGRKKKLMSELESGFVRFSLSPHKGILYLESKGLLEA-EPRAVARFLHDYADKLDKTQIGEYLGKEKDFKSGFCVAVLHEYVDAMDFTGMEFDNAIRHFLSGFRLPGEAQKIDRMMEKFAERYCLQNPQIFPSADTAFILAFSVIMLNTDQHNPAIKEEKRMTRDGFVRNNHGIANGQNLPEPFLHALFDRIKTNPISLKDDDYLREKLQAGGGGXXXXXXXXXXNPLLPYFGGGAGAGDRQKRQAFDKERQDMIRASKALF 843
            Q +  K+++  E+E+G V+F+L P  G+ YL SKG L++ +P +VA FL   AD+LDKT++GE++G+  D+  GFCV VLH YVD +DFT MEFD AIRHFLSGFRLPGEAQKIDRMMEKFAER+CLQN  +FP+ DTAFILAFS++MLNTD HNP+I + KRMT++GF+RNN GI  G++LP+ FL  +FDRI+ +PISLK+DD LR K + GG              LLP+    A A   +K    D+ERQ+M+ +S+AL 
Sbjct:  160 QAFDTKRRVQGEIEAGIVKFNLKPKDGLAYLHSKGHLDSKDPASVAAFLRAQADRLDKTEVGEFMGRGADYLGGFCVKVLHAYVDGIDFTDMEFDEAIRHFLSGFRLPGEAQKIDRMMEKFAERFCLQNASVFPNPDTAFILAFSIVMLNTDLHNPSIPDAKRMTKEGFIRNNRGIDQGKSLPDEFLGGVFDRIERSPISLKEDDQLRRKAEGGGSSATTSL-----QELLPFA---ASAQSLRKLAEHDRERQEMLTSSRALL 415          
BLAST of mRNA_P-wetherbeei_contig13904.1.1 vs. uniprot
Match: A0A6G0X305_9STRA (SEC7 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X305_9STRA)

HSP 1 Score: 301 bits (770), Expect = 2.150e-89
Identity = 148/266 (55.64%), Postives = 195/266 (73.31%), Query Frame = 1
Query:   55 QEYGRKKKLMSELESGFVRFSLSPHKGILYLESKGLLEAEPRAVARFLHDYADKLDKTQIGEYLGKEKDFKSGFCVAVLHEYVDAMDFTGMEFDNAIRHFLSGFRLPGEAQKIDRMMEKFAERYCLQNPQIFPSADTAFILAFSVIMLNTDQHNPAIKEEKRMTRDGFVRNNHGIANGQNLPEPFLHALFDRIKTNPISLKDDDYLREKLQAGGGGXXXXXXXXXXNPLLPYFGGGAGAGDRQKRQAFDKERQDMIRASKALFRQR 852
            + + +KK+L  EL  G ++F+L P  GI +L S+G +E  PR VA+F+H+   +LDKT +G+YLGKE  +++GFC+ VLHE+VD MDFTGM+ D AIRHFLSGFRLPGE+QKIDRMMEKFAERYC QNP +FPSADTAFIL+FSVIML TD HNP+I EEK+MT+DGF+RNN GI NG++LP  FL  ++DRIK+ PISLK+D  L++K+Q    G                      A DR +R+A+ KER+ M++ S+ALF++R
Sbjct:  552 EAFDKKKRLQEELAQGILKFNLKPTDGIKFLVSRGYMENAPRDVAKFIHEQNARLDKTMVGDYLGKEVQYQNGFCLKVLHEFVDMMDFTGMQVDEAIRHFLSGFRLPGESQKIDRMMEKFAERYCFQNPGVFPSADTAFILSFSVIMLQTDLHNPSIPEEKKMTKDGFIRNNRGINNGEDLPPEFLGGIYDRIKSTPISLKEDLDLKKKIQVQTTGQ---------------------ANDRMRREAYSKEREAMVKQSEALFKRR 796          
BLAST of mRNA_P-wetherbeei_contig13904.1.1 vs. uniprot
Match: W4FLG7_9STRA (SEC7 domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FLG7_9STRA)

HSP 1 Score: 293 bits (750), Expect = 1.050e-86
Identity = 143/266 (53.76%), Postives = 195/266 (73.31%), Query Frame = 1
Query:   55 QEYGRKKKLMSELESGFVRFSLSPHKGILYLESKGLLEAEPRAVARFLHDYADKLDKTQIGEYLGKEKDFKSGFCVAVLHEYVDAMDFTGMEFDNAIRHFLSGFRLPGEAQKIDRMMEKFAERYCLQNPQIFPSADTAFILAFSVIMLNTDQHNPAIKEEKRMTRDGFVRNNHGIANGQNLPEPFLHALFDRIKTNPISLKDDDYLREKLQAGGGGXXXXXXXXXXNPLLPYFGGGAGAGDRQKRQAFDKERQDMIRASKALFRQR 852
            + + +KK+L  EL  G ++F+L P  G+ +L +K  +E  PR VA+FLHD +++LDKT +G+YLGKE  +++GFC+ VLHE+VD MD+TG++ D AIRHFL+GFRLPGE+QKIDRMMEKFAERYC QNP IFPSADTAFIL+FSVIML TD HNP+I EEKRM+++GFVRNN GI NG++L   FL  ++DRIK+ PISLK+D  L++++Q   G                         DR +R+A+ KER+ M+++S+ALF++R
Sbjct:  590 EAFDKKKRLQEELAEGILKFNLKPTDGVKFLVAKKYMENTPRHVAKFLHDQSNRLDKTMVGDYLGKEVQYQNGFCLKVLHEFVDMMDYTGLQVDEAIRHFLAGFRLPGESQKIDRMMEKFAERYCFQNPGIFPSADTAFILSFSVIMLQTDLHNPSIPEEKRMSKEGFVRNNRGINNGEDLAPEFLGGIYDRIKSTPISLKEDVDLKKRIQVQTGSVQNN--------------------DRMRREAYSKEREAMVKSSEALFKRR 835          
BLAST of mRNA_P-wetherbeei_contig13904.1.1 vs. uniprot
Match: D8LFA1_ECTSI (BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA1_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 3.750e-86
Identity = 146/262 (55.73%), Postives = 190/262 (72.52%), Query Frame = 1
Query:   61 YGRKKKLMSELESGFVRFSLSPHKGILYLESKGLLEA-EPRAVARFLHDYADKLDKTQIGEYLGKEKDFKSGFCVAVLHEYVDAMDFTGMEFDNAIRHFLSGFRLPGEAQKIDRMMEKFAERYCLQNPQIFPSADTAFILAFSVIMLNTDQHNPAIKEEKRMTRDGFVRNNHGIANGQNLPEPFLHALFDRIKTNPISLKDDDYLREKLQAGGGGXXXXXXXXXXNPLLPYFGGGAGAGDRQKRQAFDKERQDMIRASKALF 843
            +  K+++  E+E+G V+F+L P  G+ YL SKG L++ +P +VA FL   AD+LDKT+IGE++G+  D   GFCV VLH YVD +DFT MEFD AIRHFLSGFRLPGEAQKIDRMMEKFAER+CLQN  +FP+ DTAFILAFS++MLNTD HNP+I + KRMT++GF+RNN GI  G++LP+ FL  +FDRI+ +PISLK+DD LR K + GG              LLP+    A A   +K    D+ERQ+M+ +S+AL 
Sbjct:  623 FDTKRRVQGEIEAGIVKFNLKPKDGLAYLHSKGHLDSKDPASVAAFLRAQADRLDKTEIGEFMGRGADHMGGFCVKVLHAYVDGIDFTDMEFDEAIRHFLSGFRLPGEAQKIDRMMEKFAERFCLQNASVFPNPDTAFILAFSIVMLNTDLHNPSIPDAKRMTKEGFIRNNRGIDQGKSLPDEFLGGVFDRIERSPISLKEDDQLRRKAEGGGSSATTSL-----QELLPFA---ASAQSLRKLAEHDRERQEMLTSSRALL 876          
BLAST of mRNA_P-wetherbeei_contig13904.1.1 vs. uniprot
Match: A0A024TEP8_9STRA (SEC7 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEP8_9STRA)

HSP 1 Score: 289 bits (740), Expect = 2.320e-85
Identity = 146/287 (50.87%), Postives = 201/287 (70.03%), Query Frame = 1
Query:    4 VSFPDPVAATTAKPPHE----QEYGRKKKLMSELESGFVRFSLSPHKGILYLESKGLLEAEPRAVARFLHDYADKLDKTQIGEYLGKEKDFKSGFCVAVLHEYVDAMDFTGMEFDNAIRHFLSGFRLPGEAQKIDRMMEKFAERYCLQNPQIFPSADTAFILAFSVIMLNTDQHNPAIKEEKRMTRDGFVRNNHGIANGQNLPEPFLHALFDRIKTNPISLKDDDYLREKLQAGGGGXXXXXXXXXXNPLLPYFGGGAGAGDRQKRQAFDKERQDMIRASKALFRQR 852
            V   D   ATT +P  +    + + +KK+L  EL  G ++F+L P  G+ +L +K  +E  PR VA+FLH+ +++LDKT +G+YLGKE  +++GFC+ VLHE+VD MD+ G++ D AIRHFL+GFRLPGE+QKIDRMMEKFAERYC QNP IFPSADTAFIL+FS+IML TD HNP+I EEKRMT++GF+RNN GI NG++L   FL  ++DRIK+ PISLK+D  L++++Q   G                         DR +R+A+ KER+ M++ S+ALF++R
Sbjct:  571 VPADDATIATTNQPLAKMSAVEAFDKKKRLQEELAEGILKFNLKPTDGVKFLVAKKYMENTPRDVAKFLHEQSNRLDKTMVGDYLGKEVQYQNGFCLKVLHEFVDMMDYMGLQVDEAIRHFLTGFRLPGESQKIDRMMEKFAERYCSQNPGIFPSADTAFILSFSIIMLQTDLHNPSIPEEKRMTKEGFIRNNRGINNGEDLAPEFLGGIYDRIKSTPISLKEDVELKKRIQVQTGNVQNN--------------------DRMRREAYSKEREAMVKNSEALFKRR 837          
BLAST of mRNA_P-wetherbeei_contig13904.1.1 vs. uniprot
Match: A0A8K1C9Z2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9Z2_PYTOL)

HSP 1 Score: 285 bits (728), Expect = 9.560e-84
Identity = 146/268 (54.48%), Postives = 191/268 (71.27%), Query Frame = 1
Query:   55 QEYGRKKKLMSELESGFVRFSLSPHKGILYLESKGLL-EAEPRAVARFLHDYADKLDKTQIGEYLGKEKDFKSGFCVAVLHEYVDAMDFTGMEFDNAIRHFLSGFRLPGEAQKIDRMMEKFAER-YCLQNPQIFPSADTAFILAFSVIMLNTDQHNPAIKEEKRMTRDGFVRNNHGIANGQNLPEPFLHALFDRIKTNPISLKDDDYLREKLQAGGGGXXXXXXXXXXNPLLPYFGGGAGAGDRQKRQAFDKERQDMIRASKALFRQR 852
            + + RKK+   EL +G ++F+  P  GI YL  +G L E  PR VARFLH+++ KLDKT++G+YLGKE+ +++GFCV VLHEYVD MDFTGME D AIRHFL+GFRLPGE+QKIDRMMEKFAER Y    P +FPSAD AFIL+FS+I+L TD HNP + EEK+M +  F RNN GI NG++LPE +L  +FDRIK NPISLK+D  LR ++   GG           +     FG  +   DRQ+R A+ +ER+ M++ S+ALF++R
Sbjct:  644 EAFDRKKRRQEELATGILKFNAKPSAGIQYLVQRGHLGEGTPRDVARFLHEHSAKLDKTEVGDYLGKEQQYQNGFCVKVLHEYVDMMDFTGMEIDTAIRHFLAGFRLPGESQKIDRMMEKFAERFYSACQPGLFPSADIAFILSFSIILLQTDLHNPNVAEEKKMDKAAFFRNNRGINNGEDLPEEYLGGIFDRIKQNPISLKEDVDLRARVGGRGG----------RSATTSIFGASSAVVDRQRRDAYIRERETMVKQSEALFKRR 901          
BLAST of mRNA_P-wetherbeei_contig13904.1.1 vs. uniprot
Match: A0A662XAI5_9STRA (SEC7 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XAI5_9STRA)

HSP 1 Score: 281 bits (718), Expect = 1.710e-82
Identity = 151/289 (52.25%), Postives = 196/289 (67.82%), Query Frame = 1
Query:    1 SVSFPDPVAATTAKPPHEQEYGRKKKLMSELESGFVRFSLSPHKGILYLESKGLL-EAEPRAVARFLHDYADKLDKTQIGEYLGKEKDFKSGFCVAVLHEYVDAMDFTGMEFDNAIRHFLSGFRLPGEAQKIDRMMEKFAERYCLQNPQ-IFPSADTAFILAFSVIMLNTDQHNPAIKEEKRMTRDGFVRNNHGIANGQNLPEPFLHALFDRIKTNPISLKDDDYLREK---LQAGGGGXXXXXXXXXXNPLLPYFGGGAGAGDRQKRQAFDKERQDMIRASKALFRQR 852
            SV+ PD V   +A     + + RKKK   EL +G ++F++ P  GI YL + G + E  PR VA+FLH ++DKLDKT +G+YLG    ++ GFCV VLHEYVD MDF G+E D AIRHFL+GFRLPGE+QKIDRMMEKFAER+    P  +FPSADTAFILAFS+IML TD HNP+I EEK+M + GF+RNN GI +G++LPE ++  +FDRIK  PISLK+D+  R +    QA G            +     FG    A DR +R A+ KER+ M+R S+ALF++R
Sbjct:   56 SVAPPDVVPVVSATMSAVEAFDRKKKRQEELATGVLKFNVKPSAGIAYLVAHGHMGEGSPRDVAQFLHTHSDKLDKTMVGDYLGNGVHYQGGFCVKVLHEYVDMMDFVGLEIDVAIRHFLAGFRLPGESQKIDRMMEKFAERFFSACPAGLFPSADTAFILAFSIIMLQTDLHNPSIPEEKKMDKVGFLRNNRGINDGKDLPEDYMGGIFDRIKATPISLKEDEDFRSRRGNAQAAG------------SAASSLFGASGAASDRMRRDAYIKERESMVRQSEALFKRR 332          
BLAST of mRNA_P-wetherbeei_contig13904.1.1 vs. uniprot
Match: K3W665_GLOUD (SEC7 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W665_GLOUD)

HSP 1 Score: 279 bits (713), Expect = 9.590e-82
Identity = 143/268 (53.36%), Postives = 190/268 (70.90%), Query Frame = 1
Query:   55 QEYGRKKKLMSELESGFVRFSLSPHKGILYLESKGLL-EAEPRAVARFLHDYADKLDKTQIGEYLGKEKDFKSGFCVAVLHEYVDAMDFTGMEFDNAIRHFLSGFRLPGEAQKIDRMMEKFAER-YCLQNPQIFPSADTAFILAFSVIMLNTDQHNPAIKEEKRMTRDGFVRNNHGIANGQNLPEPFLHALFDRIKTNPISLKDDDYLREKLQAGGGGXXXXXXXXXXNPLLPYFGGGAGAGDRQKRQAFDKERQDMIRASKALFRQR 852
            + + RKKK   EL +G ++F++ P  G+ YL   G + E  PR VARF+ ++ DKLDKT +G+YLG+E  ++ GFC+ VLHEYVD MDFTG+E D AIR FL+GFRLPGE+QKIDRMMEKFAER Y +  P +FPSADTAFIL+FS+IML TD HNP+I EEK+MT++GF+RNN GI NG++LPE ++  +FDRIK  PISLK+D+  + + +  GG                 FG      DRQ+R A+ KER+ M+R S+ALF++R
Sbjct:  624 EAFDRKKKRQEELATGILKFNVKPVAGVQYLVEHGHMGEGTPRDVARFITEHNDKLDKTMVGDYLGREAQYQGGFCLRVLHEYVDMMDFTGLEIDMAIRVFLAGFRLPGESQKIDRMMEKFAERFYSVCPPGLFPSADTAFILSFSIIMLQTDLHNPSIPEEKKMTKEGFLRNNRGINNGEDLPEEYMSGIFDRIKQTPISLKEDEDFKARRKMVGG--------VKAVAATTLFGSSGVTADRQRRDAYIKERESMVRQSEALFKRR 883          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13904.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQI7_ECTSI1.590e-10265.54BIG1, ArfGEF protein of the BIG/GBF family n=2 Tax... [more]
A0A4D9CUH3_9STRA7.040e-9558.05SEC7 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A6H5KIY2_9PHAE1.090e-9055.30SEC7 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6G0X305_9STRA2.150e-8955.64SEC7 domain-containing protein n=1 Tax=Aphanomyces... [more]
W4FLG7_9STRA1.050e-8653.76SEC7 domain-containing protein n=3 Tax=Aphanomyces... [more]
D8LFA1_ECTSI3.750e-8655.73BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax... [more]
A0A024TEP8_9STRA2.320e-8550.87SEC7 domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A8K1C9Z2_PYTOL9.560e-8454.48Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662XAI5_9STRA1.710e-8252.25SEC7 domain-containing protein n=2 Tax=Nothophytop... [more]
K3W665_GLOUD9.590e-8253.36SEC7 domain-containing protein n=1 Tax=Globisporan... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13904contigP-wetherbeei_contig13904:282..1752 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LQI7
PFAMsDCB,DUF1981,Sec7,Sec7_N
Model size888
Max annot lvl2759|Eukaryota
KEGG koko:K18442
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.61e-103
EggNOG OGsCOG5307@1|root,KOG0929@2759|Eukaryota
Ec32 ortholog descriptionBIG2, ArfGEF protein of the BIG/GBF family
Ec32 orthologEc-01_004200.1
Descriptionregulation of ARF protein signal transduction
Cds size888
COG categoryK
BRITEko00000,ko00001,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186001.411407-CDS-P-wetherbeei_contig13904:281..5121683186001.411407-CDS-P-wetherbeei_contig13904:281..512Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13904 282..512 +
1683186001.426895-CDS-P-wetherbeei_contig13904:909..11221683186001.426895-CDS-P-wetherbeei_contig13904:909..1122Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13904 910..1122 +
1683186001.4367356-CDS-P-wetherbeei_contig13904:1308..17521683186001.4367356-CDS-P-wetherbeei_contig13904:1308..1752Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13904 1309..1752 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13904.1.1prot_P-wetherbeei_contig13904.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13904 282..1752 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13904.1.1

>prot_P-wetherbeei_contig13904.1.1 ID=prot_P-wetherbeei_contig13904.1.1|Name=mRNA_P-wetherbeei_contig13904.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=296bp
SVSFPDPVAATTAKPPHEQEYGRKKKLMSELESGFVRFSLSPHKGILYLE
SKGLLEAEPRAVARFLHDYADKLDKTQIGEYLGKEKDFKSGFCVAVLHEY
VDAMDFTGMEFDNAIRHFLSGFRLPGEAQKIDRMMEKFAERYCLQNPQIF
PSADTAFILAFSVIMLNTDQHNPAIKEEKRMTRDGFVRNNHGIANGQNLP
EPFLHALFDRIKTNPISLKDDDYLREKLQAGGGGGVGGGGVGGGNPLLPY
FGGGAGAGDRQKRQAFDKERQDMIRASKALFRQRKQKQQALLQQRQ
back to top

mRNA from alignment at P-wetherbeei_contig13904:282..1752+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13904.1.1 ID=mRNA_P-wetherbeei_contig13904.1.1|Name=mRNA_P-wetherbeei_contig13904.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1471bp|location=Sequence derived from alignment at P-wetherbeei_contig13904:282..1752+ (Phaeothamnion wetherbeei SAG_119_79)
TCTGTTTCCTTTCCTGACCCTGTCGCGGCTACGACGGCCAAACCCCCCCA CGAACAGGAGTACGGGCGCAAGAAGAAGCTAATGTCGGAGCTCGAATCAG GCTTTGTGCGCTTCAGCCTGTCACCGCACAAGGGCATCCTGTACCTCGAG TCCAAGGGGCTGCTCGAGGCGGAGCCGCGCGCCGTGGCCCGCTTCCTGCA CGACTACGCCGACAAGCTCGACAAGACGCAGGTGCGCGATTCACAGTATA TGGAAATTGCGGCTGTGGGGCACTTTGGCATGGACGACGCAATGGAATGG TGTAATCGCCACGGTGCAGCAGTGCCATATTCTTCTGTCGGAGCCATTTG CCGCCTTTGCTCGAGGCTGGACTGTGATGCGCCAACGGTTGGAAAGATGT CCCAAAGCCACTTCTGCCGTTTATTGCGCTATGCCCTTTTGGCGGCGCAT TCAATCGCCGTGCCCCTGCAACCTTAGTGAGGTGGAGATCTCCTGTTACC CTTCTTTTGTGTAGCTACCGCCTCGTTTTGGCTCTCGCTCTCACCGTGGC TGGGATCTCAAGTAAGCCGCCACCATAATTTGTAACTGCCCTTCTTTCGT AACTGTCGTGCAATCGATCTTCTCGCAGATCGGGGAGTACCTGGGCAAGG AGAAGGACTTCAAAAGCGGTTTCTGCGTGGCCGTCCTTCACGAGTACGTT GACGCGATGGATTTCACGGGGATGGAATTCGACAACGCCATCCGCCACTT CTTATCGGGCTTCCGGCTGCCCGGCGAGGCGCAGAAGATCGACCGCATGA TGGAGAAGTTCGCCGAGCGCTACTGCCTCCAGAACCCACAGGTGCTCTTT CCGCAGGTTCCATTCGGTTGGTTACGCTGCTTTGTGCCTGTTTCAATTCT TGTTTCCCTGGTTTTTGCTTCGTTGGGGGGATTTGGTTATTGCGTAAGTA CCCTAAATCACAGACGTTTTCGCATTGCGCAATAATCGCTGCCTCCCCTT TGTTCCTCTTTCCTCCCCCGGAGGCAGATTTTCCCGTCGGCAGACACGGC CTTCATCCTGGCCTTCAGCGTCATCATGCTCAACACGGACCAGCATAACC CGGCCATTAAAGAAGAGAAGCGCATGACCCGTGACGGCTTCGTCCGCAAC AACCACGGCATCGCCAACGGCCAGAACCTTCCGGAACCGTTCCTGCATGC ACTCTTTGACCGCATCAAGACCAACCCCATTTCGTTGAAGGACGACGACT ACCTGCGGGAGAAGCTGCAGGCGGGCGGTGGCGGCGGCGTGGGCGGCGGC GGCGTCGGCGGCGGCAACCCACTGCTGCCATACTTTGGGGGCGGCGCTGG CGCTGGCGACCGGCAGAAGCGTCAGGCATTCGACAAGGAACGGCAAGATA TGATCCGCGCGAGCAAGGCGCTCTTTCGGCAGCGCAAGCAGAAGCAGCAG GCGCTGCTGCAGCAGCGGCAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig13904:282..1752+

>mRNA_P-wetherbeei_contig13904.1.1 ID=mRNA_P-wetherbeei_contig13904.1.1|Name=mRNA_P-wetherbeei_contig13904.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=888bp|location=Sequence derived from alignment at P-wetherbeei_contig13904:282..1752+ (Phaeothamnion wetherbeei SAG_119_79)
TCTGTTTCCTTTCCTGACCCTGTCGCGGCTACGACGGCCAAACCCCCCCA
CGAACAGGAGTACGGGCGCAAGAAGAAGCTAATGTCGGAGCTCGAATCAG
GCTTTGTGCGCTTCAGCCTGTCACCGCACAAGGGCATCCTGTACCTCGAG
TCCAAGGGGCTGCTCGAGGCGGAGCCGCGCGCCGTGGCCCGCTTCCTGCA
CGACTACGCCGACAAGCTCGACAAGACGCAGATCGGGGAGTACCTGGGCA
AGGAGAAGGACTTCAAAAGCGGTTTCTGCGTGGCCGTCCTTCACGAGTAC
GTTGACGCGATGGATTTCACGGGGATGGAATTCGACAACGCCATCCGCCA
CTTCTTATCGGGCTTCCGGCTGCCCGGCGAGGCGCAGAAGATCGACCGCA
TGATGGAGAAGTTCGCCGAGCGCTACTGCCTCCAGAACCCACAGATTTTC
CCGTCGGCAGACACGGCCTTCATCCTGGCCTTCAGCGTCATCATGCTCAA
CACGGACCAGCATAACCCGGCCATTAAAGAAGAGAAGCGCATGACCCGTG
ACGGCTTCGTCCGCAACAACCACGGCATCGCCAACGGCCAGAACCTTCCG
GAACCGTTCCTGCATGCACTCTTTGACCGCATCAAGACCAACCCCATTTC
GTTGAAGGACGACGACTACCTGCGGGAGAAGCTGCAGGCGGGCGGTGGCG
GCGGCGTGGGCGGCGGCGGCGTCGGCGGCGGCAACCCACTGCTGCCATAC
TTTGGGGGCGGCGCTGGCGCTGGCGACCGGCAGAAGCGTCAGGCATTCGA
CAAGGAACGGCAAGATATGATCCGCGCGAGCAAGGCGCTCTTTCGGCAGC
GCAAGCAGAAGCAGCAGGCGCTGCTGCAGCAGCGGCAG
back to top