mRNA_P-wetherbeei_contig13903.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13903.1.1 vs. uniprot
Match: A0A521QXW0_9HYPH (sn-glycerol-3-phosphate ABC transporter permease UgpA n=7 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A521QXW0_9HYPH) HSP 1 Score: 332 bits (850), Expect = 1.050e-112 Identity = 169/192 (88.02%), Postives = 180/192 (93.75%), Query Frame = 1
Query: 1 MEKRVTFNERWLPYLLVGPQIIITLVFFFWPSGQAIYQSVLIEDAFGGNSKFVYLDNFTRLFTDSAYYASARLTVVFSFLVAAIGLAFSLLLAVMADRIIRGATAYKAFLVWPYAVAPAVAGVLWGFLFNPSVGIVAWMLQGIGIEFNYVTNGNQALTLVVIAAVWNQISSNFLFFLAGLQSIPKSLIGAAA 576
MEKRVTFNERWLPYLL+GPQ+IITLVFFFWPSGQAIYQSVLIEDAFGGNSKFV+ +NF +LF D++Y SA++TVVFSFLVAAIGL SLLLAVMADR+IRGATAYK FLVWPYAVAPAVAGVLWGFLFNPSVGI+AWMLQGIGIEFNYV NGNQAL LVVIAAVWNQIS NFLFFLAGLQSIPKSLI AAA
Sbjct: 1 MEKRVTFNERWLPYLLLGPQMIITLVFFFWPSGQAIYQSVLIEDAFGGNSKFVWFENFAQLFRDNSYAHSAQITVVFSFLVAAIGLGISLLLAVMADRVIRGATAYKTFLVWPYAVAPAVAGVLWGFLFNPSVGILAWMLQGIGIEFNYVVNGNQALLLVVIAAVWNQISYNFLFFLAGLQSIPKSLIEAAA 192
BLAST of mRNA_P-wetherbeei_contig13903.1.1 vs. uniprot
Match: A0A1Q3LN42_9PROT (Glycerol-3-phosphate transporter permease n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Q3LN42_9PROT) HSP 1 Score: 332 bits (850), Expect = 1.050e-112 Identity = 168/192 (87.50%), Postives = 178/192 (92.71%), Query Frame = 1
Query: 1 MEKRVTFNERWLPYLLVGPQIIITLVFFFWPSGQAIYQSVLIEDAFGGNSKFVYLDNFTRLFTDSAYYASARLTVVFSFLVAAIGLAFSLLLAVMADRIIRGATAYKAFLVWPYAVAPAVAGVLWGFLFNPSVGIVAWMLQGIGIEFNYVTNGNQALTLVVIAAVWNQISSNFLFFLAGLQSIPKSLIGAAA 576
MEK+VTFNERWLPYLLV PQI+ITLVFFFWPSGQAIYQSVL+EDAFGGN+KFV+LDNF LF D YYASARLT+VFS LVA +GL SLLLAVMADR+IRGATAYK FLVWPYAVAPAVAGVLWGFLFNPSVGIVAW+LQGIGIEFNYV+NGNQAL LVVIAAVWNQIS NFLFFLAGLQSIPKSLI AAA
Sbjct: 1 MEKKVTFNERWLPYLLVAPQIVITLVFFFWPSGQAIYQSVLLEDAFGGNTKFVFLDNFIHLFQDPGYYASARLTLVFSALVATLGLGLSLLLAVMADRVIRGATAYKTFLVWPYAVAPAVAGVLWGFLFNPSVGIVAWLLQGIGIEFNYVSNGNQALLLVVIAAVWNQISYNFLFFLAGLQSIPKSLIEAAA 192
BLAST of mRNA_P-wetherbeei_contig13903.1.1 vs. uniprot
Match: A0A1T4SVW3_9HYPH (Glycerol 3-phosphate ABC transporter membrane protein n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4SVW3_9HYPH) HSP 1 Score: 319 bits (817), Expect = 1.100e-107 Identity = 159/192 (82.81%), Postives = 173/192 (90.10%), Query Frame = 1
Query: 1 MEKRVTFNERWLPYLLVGPQIIITLVFFFWPSGQAIYQSVLIEDAFGGNSKFVYLDNFTRLFTDSAYYASARLTVVFSFLVAAIGLAFSLLLAVMADRIIRGATAYKAFLVWPYAVAPAVAGVLWGFLFNPSVGIVAWMLQGIGIEFNYVTNGNQALTLVVIAAVWNQISSNFLFFLAGLQSIPKSLIGAAA 576
MEKRVTFNERWLPYLLV PQI++TLVFFFWPS Q I+QS L+EDAFGGN+KFV DNF LF DSAY+ASARLT+ FSFLVAAIGLA SLLLAVMADR+IRGAT YK FLVWPYAVAPAVAGVLWGFLFNPSVG VAW+L +GI+FNYVTNGNQAL L+VIAAVWNQ+S NFLFFLAGLQSIP+SLI AAA
Sbjct: 1 MEKRVTFNERWLPYLLVAPQIVVTLVFFFWPSAQMIWQSTLLEDAFGGNTKFVGFDNFVSLFNDSAYFASARLTITFSFLVAAIGLAVSLLLAVMADRVIRGATIYKTFLVWPYAVAPAVAGVLWGFLFNPSVGTVAWLLHNVGIDFNYVTNGNQALLLIVIAAVWNQVSYNFLFFLAGLQSIPRSLIEAAA 192
BLAST of mRNA_P-wetherbeei_contig13903.1.1 vs. uniprot
Match: A0A537N7J9_9PROT (sn-glycerol-3-phosphate ABC transporter permease UgpA n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N7J9_9PROT) HSP 1 Score: 317 bits (811), Expect = 9.000e-107 Identity = 158/192 (82.29%), Postives = 175/192 (91.15%), Query Frame = 1
Query: 1 MEKRVTFNERWLPYLLVGPQIIITLVFFFWPSGQAIYQSVLIEDAFGGNSKFVYLDNFTRLFTDSAYYASARLTVVFSFLVAAIGLAFSLLLAVMADRIIRGATAYKAFLVWPYAVAPAVAGVLWGFLFNPSVGIVAWMLQGIGIEFNYVTNGNQALTLVVIAAVWNQISSNFLFFLAGLQSIPKSLIGAAA 576
MEKRVTFNERWLPYLLV PQIIITLVFFFWPSGQ ++QSV+ EDAFGGN+KFV+ DNF LF DS Y S RLT+VFSFLVAAIGLA SLLLAVMADRIIRGA+ YKA LVWPYAVAPA+AGVLWGFLFNPSVG V+WML+G+GI+FNYVTNG+QALTL++IAAVWNQ+S NFLFFLAGLQSIP+SLI AAA
Sbjct: 1 MEKRVTFNERWLPYLLVAPQIIITLVFFFWPSGQMLFQSVVTEDAFGGNTKFVWFDNFVHLFNDSGYADSVRLTLVFSFLVAAIGLAISLLLAVMADRIIRGASFYKAILVWPYAVAPAIAGVLWGFLFNPSVGSVSWMLKGVGIDFNYVTNGHQALTLIIIAAVWNQVSYNFLFFLAGLQSIPRSLIEAAA 192
BLAST of mRNA_P-wetherbeei_contig13903.1.1 vs. uniprot
Match: A0A512NN74_9HYPH (Glycerol-3-phosphate transporter permease n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A512NN74_9HYPH) HSP 1 Score: 315 bits (808), Expect = 2.570e-106 Identity = 159/192 (82.81%), Postives = 176/192 (91.67%), Query Frame = 1
Query: 1 MEKRVTFNERWLPYLLVGPQIIITLVFFFWPSGQAIYQSVLIEDAFGGNSKFVYLDNFTRLFTDSAYYASARLTVVFSFLVAAIGLAFSLLLAVMADRIIRGATAYKAFLVWPYAVAPAVAGVLWGFLFNPSVGIVAWMLQGIGIEFNYVTNGNQALTLVVIAAVWNQISSNFLFFLAGLQSIPKSLIGAAA 576
MEKRVTFNERWLPYLLV PQI+ITLVFFFWPSG+AI+QSVL+EDAFGGNSKFV+ +NF+ LF+D Y+ASARLT+VFS LVA++GLA SLLLAVMADR+IRGA+AYK LVWPYAVAPAVAGVLWGFLFNPSVG+VAW L IGIEFNYV NGNQAL L+V+AAVWNQIS NFLFFLAGLQSIPKSLI AAA
Sbjct: 1 MEKRVTFNERWLPYLLVAPQIVITLVFFFWPSGEAIWQSVLVEDAFGGNSKFVWFENFSHLFSDPNYFASARLTLVFSALVASLGLAASLLLAVMADRVIRGASAYKTILVWPYAVAPAVAGVLWGFLFNPSVGVVAWALSVIGIEFNYVINGNQALLLIVLAAVWNQISYNFLFFLAGLQSIPKSLIEAAA 192
BLAST of mRNA_P-wetherbeei_contig13903.1.1 vs. uniprot
Match: A0A6A7MF27_9PROT (ABC transporter permease subunit n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7MF27_9PROT) HSP 1 Score: 310 bits (794), Expect = 2.160e-104 Identity = 156/192 (81.25%), Postives = 173/192 (90.10%), Query Frame = 1
Query: 1 MEKRVTFNERWLPYLLVGPQIIITLVFFFWPSGQAIYQSVLIEDAFGGNSKFVYLDNFTRLFTDSAYYASARLTVVFSFLVAAIGLAFSLLLAVMADRIIRGATAYKAFLVWPYAVAPAVAGVLWGFLFNPSVGIVAWMLQGIGIEFNYVTNGNQALTLVVIAAVWNQISSNFLFFLAGLQSIPKSLIGAAA 576
MEKRVTFNERWLPYLLV PQI+ITLVFFFWPSGQAI+QSVL+EDAFGGN+KFV+ DNF L +D +YY++ARLT+VFSFLVA++GLA SLLLAVMADRIIRGA+ YK LVWPYAVAPAV GVL+GFLFNPSVG+VAW L IGIEFNYV NGNQAL L+V AAVWNQ+S NFLFFLAGLQSIPKSLI AAA
Sbjct: 1 MEKRVTFNERWLPYLLVAPQIVITLVFFFWPSGQAIWQSVLVEDAFGGNTKFVWFDNFVHLLSDPSYYSAARLTLVFSFLVASLGLAVSLLLAVMADRIIRGASVYKNILVWPYAVAPAVVGVLFGFLFNPSVGVVAWALAAIGIEFNYVINGNQALLLIVYAAVWNQVSYNFLFFLAGLQSIPKSLIEAAA 192
BLAST of mRNA_P-wetherbeei_contig13903.1.1 vs. uniprot
Match: A0A3S0E4K6_9HYPH (sn-glycerol-3-phosphate ABC transporter permease UgpA n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3S0E4K6_9HYPH) HSP 1 Score: 270 bits (689), Expect = 3.180e-88 Identity = 137/193 (70.98%), Postives = 164/193 (84.97%), Query Frame = 1
Query: 1 MEKRVTFNERWLPYLLVGPQIIITLVFFFWPSGQAIYQSVLIEDAFGGNSKFVYLDNFTRLFTDSAYYASARLTVVFSFLVAAIGLAFSLLLAVMADRIIRGATAYKAFLVWPYAVAPAVAGVLWGFLFNPSVGIVAWMLQ-GIGIEFNYVTNGNQALTLVVIAAVWNQISSNFLFFLAGLQSIPKSLIGAAA 576
M KRV F+++ LPY+LV PQ++ITLVFF WPSGQA++QSV++EDAFGGN++FV NF RL + Y+AS ++TVVFSF+VA GL FSLLLA MADRI+RGA+AYKAFLVWPYAVAPAVAGV++GFLFNP+VG+VAW L+ G+G EFNYV N QAL LV+ AA WNQIS NFLFFLAGLQSIP+SLI AAA
Sbjct: 1 MNKRVRFDDQLLPYILVAPQVLITLVFFIWPSGQALWQSVILEDAFGGNTRFVGFANFVRLLGEPGYWASVQVTVVFSFMVALGGLIFSLLLATMADRIVRGASAYKAFLVWPYAVAPAVAGVIFGFLFNPAVGVVAWALKHGLGYEFNYVINSTQALWLVIFAACWNQISYNFLFFLAGLQSIPRSLIEAAA 193
BLAST of mRNA_P-wetherbeei_contig13903.1.1 vs. uniprot
Match: A0A853ITR3_9BURK (sn-glycerol-3-phosphate ABC transporter permease UgpA n=1 Tax=Ottowia beijingensis TaxID=1207057 RepID=A0A853ITR3_9BURK) HSP 1 Score: 254 bits (649), Expect = 3.720e-82 Identity = 125/192 (65.10%), Postives = 157/192 (81.77%), Query Frame = 1
Query: 1 MEKRVTFNERWLPYLLVGPQIIITLVFFFWPSGQAIYQSVLIEDAFGGNSKFVYLDNFTRLFTDSAYYASARLTVVFSFLVAAIGLAFSLLLAVMADRIIRGATAYKAFLVWPYAVAPAVAGVLWGFLFNPSVGIVAWMLQGIGIEFNYVTNGNQALTLVVIAAVWNQISSNFLFFLAGLQSIPKSLIGAAA 576
MEKRV F WLP+LLV PQ+ I +VFFFWP+GQAIYQS L EDAFG +++FV L+NFT+LF D +Y AS + T++FS LVA +GL+ SL+LAVMADR+I+GAT YK L+WPYAVAPAVAGVLW F+F PS+G+VAW L+ IG +N++ +G A+ L+V+AAVW QIS NFLFFLAGLQS+P+SLI AAA
Sbjct: 1 MEKRVRFKSAWLPWLLVAPQLAIVIVFFFWPAGQAIYQSFLREDAFGTSTEFVGLENFTQLFNDPSYLASFKTTLIFSVLVAVLGLSISLVLAVMADRVIKGATGYKTLLIWPYAVAPAVAGVLWLFMFAPSIGVVAWGLRQIGFNWNHLLDGTHAMALIVMAAVWKQISYNFLFFLAGLQSVPRSLIEAAA 192
BLAST of mRNA_P-wetherbeei_contig13903.1.1 vs. uniprot
Match: UPI0019196935 (sn-glycerol-3-phosphate ABC transporter permease UgpA n=1 Tax=Rubrivivax sp. A210 TaxID=2772301 RepID=UPI0019196935) HSP 1 Score: 251 bits (641), Expect = 6.260e-81 Identity = 126/192 (65.62%), Postives = 156/192 (81.25%), Query Frame = 1
Query: 1 MEKRVTFNERWLPYLLVGPQIIITLVFFFWPSGQAIYQSVLIEDAFGGNSKFVYLDNFTRLFTDSAYYASARLTVVFSFLVAAIGLAFSLLLAVMADRIIRGATAYKAFLVWPYAVAPAVAGVLWGFLFNPSVGIVAWMLQGIGIEFNYVTNGNQALTLVVIAAVWNQISSNFLFFLAGLQSIPKSLIGAAA 576
+EKRV F WLP++LV PQ+ + LVFFFWP+GQA+YQSV++EDAFG ++FV +NFTRLF D Y AS R T VFS LVA +GL +LLLAVMADR+++GAT YK FL+ PYAVAPAVAGVLW FLF PSVG+V++ L+ +G E+N++ +GN A+ L+V+AAVW QIS NFLFFLAGLQSIPKSLI AAA
Sbjct: 3 VEKRVRFKSWWLPWVLVAPQMAVVLVFFFWPAGQALYQSVMLEDAFGTTTQFVGAENFTRLFADDTYLASFRTTAVFSVLVAGVGLTVALLLAVMADRVVKGATFYKTFLILPYAVAPAVAGVLWLFLFAPSVGVVSFALRRLGFEWNHLLDGNHAMALIVMAAVWKQISYNFLFFLAGLQSIPKSLIEAAA 194
BLAST of mRNA_P-wetherbeei_contig13903.1.1 vs. uniprot
Match: A0A0S8BAE1_9PROT (Glycerol-3-phosphate transporter permease n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8BAE1_9PROT) HSP 1 Score: 250 bits (638), Expect = 1.680e-80 Identity = 126/192 (65.62%), Postives = 152/192 (79.17%), Query Frame = 1
Query: 1 MEKRVTFNERWLPYLLVGPQIIITLVFFFWPSGQAIYQSVLIEDAFGGNSKFVYLDNFTRLFTDSAYYASARLTVVFSFLVAAIGLAFSLLLAVMADRIIRGATAYKAFLVWPYAVAPAVAGVLWGFLFNPSVGIVAWMLQGIGIEFNYVTNGNQALTLVVIAAVWNQISSNFLFFLAGLQSIPKSLIGAAA 576
MEKRV F WLPYLLV PQI IT+VFFFWP+ QA++ S L++DAFG ++FV L NF LF D Y S ++T +FS LVA G+ SLLLA MADR+IRGA AYK L+WPYAVAPA+AGVLW F+F PS+GIV + L+ +G+++N+V NG+QA+ LVVIAAVWNQIS NFLFFLAGLQSIPKSLI AAA
Sbjct: 1 MEKRVVFRSAWLPYLLVAPQIAITVVFFFWPAVQAVWYSFLLQDAFGLKTQFVGLQNFVALFNDPHYLQSFKITALFSVLVAGSGIVISLLLAAMADRVIRGALAYKTLLIWPYAVAPAIAGVLWAFMFAPSIGIVTYALKKMGVDWNWVVNGDQAMLLVVIAAVWNQISYNFLFFLAGLQSIPKSLIEAAA 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13903.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13903.1.1 >prot_P-wetherbeei_contig13903.1.1 ID=prot_P-wetherbeei_contig13903.1.1|Name=mRNA_P-wetherbeei_contig13903.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=192bp MEKRVTFNERWLPYLLVGPQIIITLVFFFWPSGQAIYQSVLIEDAFGGNSback to top mRNA from alignment at P-wetherbeei_contig13903:3..578- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13903.1.1 ID=mRNA_P-wetherbeei_contig13903.1.1|Name=mRNA_P-wetherbeei_contig13903.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig13903:3..578- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13903:3..578- >mRNA_P-wetherbeei_contig13903.1.1 ID=mRNA_P-wetherbeei_contig13903.1.1|Name=mRNA_P-wetherbeei_contig13903.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig13903:3..578- (Phaeothamnion wetherbeei SAG_119_79)back to top |