mRNA_P-wetherbeei_contig13896.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13896.1.1 vs. uniprot
Match: D8LB55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB55_ECTSI) HSP 1 Score: 158 bits (399), Expect = 2.190e-43 Identity = 75/110 (68.18%), Postives = 88/110 (80.00%), Query Frame = 1
Query: 28 VQVPYKGKLLESRDLQQQVRQWVEYGTIEPSAGEGLLAVSADNRWRDLSEKYFVLLGAGSAMGPLHLLLELGANVIAIDLDRPGIWKRLLALAQNSPGTMTFPMKAGTKQ 357
+QVPYK ++L L+ QV +WV YGTIEPSAG + VS WRDLS++YFVLLGAGSAMGPL LLLELGAN++AIDLDRPGIW+RLL LA+NS GTM FP+KAG Q
Sbjct: 132 LQVPYKDEILTGNALEDQVDKWVSYGTIEPSAGAAIKDVSQKGEWRDLSDRYFVLLGAGSAMGPLKLLLELGANIVAIDLDRPGIWQRLLGLAENSCGTMIFPLKAGKPQ 241
BLAST of mRNA_P-wetherbeei_contig13896.1.1 vs. uniprot
Match: A0A835Z6A9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A9_9STRA) HSP 1 Score: 157 bits (398), Expect = 2.640e-43 Identity = 75/108 (69.44%), Postives = 89/108 (82.41%), Query Frame = 1
Query: 28 VQVPYKGKLLESRDLQQQVRQWVEYGTIEPSAGEGLLAVSADNRWRDLSEKYFVLLGAGSAMGPLHLLLELGANVIAIDLDRPGIWKRLLALAQNSPGTMTFPMKAGT 351
+++PYKGK+LE +L++QV +WVEYGTIEPSAG+ +L V + WRDLS+KYFVLLGA SAMGPL LLLELGANVIA+DLDRP IW LLALA+ S GTMTFP K T
Sbjct: 134 LRIPYKGKVLEGGELERQVVRWVEYGTIEPSAGDAILTVMRTDEWRDLSDKYFVLLGASSAMGPLRLLLELGANVIAVDLDRPHIWTSLLALARASSGTMTFPTKGDT 241
BLAST of mRNA_P-wetherbeei_contig13896.1.1 vs. uniprot
Match: A0A448ZLX2_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLX2_9STRA) HSP 1 Score: 152 bits (384), Expect = 6.890e-41 Identity = 69/105 (65.71%), Postives = 88/105 (83.81%), Query Frame = 1
Query: 28 VQVPYKGKLLESRDLQQQVRQWVEYGTIEPSAGEGLLAVSADNRWRDLSEKYFVLLGAGSAMGPLHLLLELGANVIAIDLDRPGIWKRLLALAQNSPGTMTFPMK 342
++VPYKG +L+ + L+ QV++WV+YGTIEPSAGE ++ + W DLS+KYFVLLGAGSAMGPL +LL LGANVIA+DLDRP IWKRL+ LA+ SPGT+TFP+K
Sbjct: 238 MEVPYKGTILKGQSLKDQVKKWVDYGTIEPSAGEAIIGCVDNPNWCDLSDKYFVLLGAGSAMGPLLVLLALGANVIAVDLDRPNIWKRLIGLAKKSPGTITFPLK 342
BLAST of mRNA_P-wetherbeei_contig13896.1.1 vs. uniprot
Match: A0A7S4GPW4_OXYMA (Hypothetical protein (Fragment) n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S4GPW4_OXYMA) HSP 1 Score: 137 bits (346), Expect = 1.620e-39 Identity = 62/105 (59.05%), Postives = 82/105 (78.10%), Query Frame = 1
Query: 28 VQVPYKGKLLESRDLQQQVRQWVEYGTIEPSAGEGLLAVSADNRWRDLSEKYFVLLGAGSAMGPLHLLLELGANVIAIDLDRPGIWKRLLALAQNSPGTMTFPMK 342
+++PYKG +L+ L++QV+ W +YGTIEPSAG ++ W D+S +YFVLLGAGSAMGPL +L+ LGANVIA+DLDRP IWKRL+ +A+ S GT+TFPMK
Sbjct: 15 LEIPYKGGILKGDALKKQVQSWADYGTIEPSAGAAIVKCIEHPEWLDISNRYFVLLGAGSAMGPLLVLMALGANVIAVDLDRPNIWKRLIDIARQSSGTITFPMK 119
BLAST of mRNA_P-wetherbeei_contig13896.1.1 vs. uniprot
Match: A0A1E7FRX0_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRX0_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.770e-39 Identity = 68/105 (64.76%), Postives = 87/105 (82.86%), Query Frame = 1
Query: 28 VQVPYKGKLLESRDLQQQVRQWVEYGTIEPSAGEGLLAVSADNRWRDLSEKYFVLLGAGSAMGPLHLLLELGANVIAIDLDRPGIWKRLLALAQNSPGTMTFPMK 342
+++PYKGK+L+ + L+ QV+ WV+YGTIEPSAGE ++ + W DLS+KYFVLLGAGSAMGPL +LL LGANVIA+DLDRP IWKRL+ LA+ S GT+TFP+K
Sbjct: 364 IEIPYKGKILKGQALKDQVKSWVDYGTIEPSAGEAIIGCVDNPGWCDLSDKYFVLLGAGSAMGPLMVLLALGANVIAVDLDRPMIWKRLIGLAKKSSGTITFPLK 468
BLAST of mRNA_P-wetherbeei_contig13896.1.1 vs. uniprot
Match: A0A7S2SAM4_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SAM4_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.400e-39 Identity = 70/105 (66.67%), Postives = 85/105 (80.95%), Query Frame = 1
Query: 28 VQVPYKGKLLESRDLQQQVRQWVEYGTIEPSAGEGLLAVSADNRWRDLSEKYFVLLGAGSAMGPLHLLLELGANVIAIDLDRPGIWKRLLALAQNSPGTMTFPMK 342
+++PYKGK+L L+QQV +WVEYGTIEPSAGE + + W DLS ++FVLLGAGSAMGP +L+ LGANVIAIDLDRP IWKRLL +A+NSPG+MTFPMK
Sbjct: 353 LEIPYKGKILSGDALKQQVDKWVEYGTIEPSAGEAIKGCVDNPGWMDLSNRHFVLLGAGSAMGPFLVLMALGANVIAIDLDRPQIWKRLLNIAKNSPGSMTFPMK 457
BLAST of mRNA_P-wetherbeei_contig13896.1.1 vs. uniprot
Match: A0A7S0TD09_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TD09_9STRA) HSP 1 Score: 145 bits (367), Expect = 3.030e-38 Identity = 67/105 (63.81%), Postives = 86/105 (81.90%), Query Frame = 1
Query: 28 VQVPYKGKLLESRDLQQQVRQWVEYGTIEPSAGEGLLAVSADNRWRDLSEKYFVLLGAGSAMGPLHLLLELGANVIAIDLDRPGIWKRLLALAQNSPGTMTFPMK 342
+Q+PYKGK+L+ L+ QV++WV+YGTIE SAGE ++ + W DLS+KYFVLLGAGSAMGPL +LL LGANVIA+DLDRP IWKRL+ LA+ S G++TFP+K
Sbjct: 365 MQIPYKGKILKGEALKHQVKKWVDYGTIEASAGEAIIGCVDNPNWCDLSDKYFVLLGAGSAMGPLLVLLALGANVIAVDLDRPQIWKRLIGLAKKSSGSITFPLK 469
BLAST of mRNA_P-wetherbeei_contig13896.1.1 vs. uniprot
Match: A0A6S9ITY6_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ITY6_9STRA) HSP 1 Score: 144 bits (364), Expect = 7.640e-38 Identity = 67/106 (63.21%), Postives = 85/106 (80.19%), Query Frame = 1
Query: 28 VQVPYKGKLLESRDLQQQVRQWVEYGTIEPSAGEGLLAVSADNRWRDLSEKYFVLLGAGSAMGPLHLLLELGANVIAIDLDRPGIWKRLLALAQNSPGTMTFPMKA 345
++VPY GK L ++L+ QV++WV+YGTIEPSAGE ++ + W DLS+KYFVLLGAGSAMGP +L+ LGANVIAIDLDRP IWKRL+ A+NS G++TFPM A
Sbjct: 355 LEVPYNGKTLAGQELKDQVKKWVDYGTIEPSAGEAIIKCVDNPGWLDLSDKYFVLLGAGSAMGPFEVLMSLGANVIAIDLDRPFIWKRLINRAKNSSGSITFPMNA 460
BLAST of mRNA_P-wetherbeei_contig13896.1.1 vs. uniprot
Match: A0A1Z5JSJ0_FISSO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSJ0_FISSO) HSP 1 Score: 142 bits (357), Expect = 6.740e-37 Identity = 66/107 (61.68%), Postives = 85/107 (79.44%), Query Frame = 1
Query: 28 VQVPYKGKLLESRDLQQQVRQWVEYGTIEPSAGEGLLAVSADNRW--RDLSEKYFVLLGAGSAMGPLHLLLELGANVIAIDLDRPGIWKRLLALAQNSPGTMTFPMK 342
++VPY GK L ++L+ QV+ WV+YGTIEPSAGE ++ + +W + S++YFVLLGAGSAMGPL +LL LGANVIA+DLDRPGIWK L+ LA+ S GTMTFP+K
Sbjct: 340 LEVPYNGKQLSGQELKDQVQAWVDYGTIEPSAGEAIIKCVDNPKWFSEEFSKRYFVLLGAGSAMGPLKVLLALGANVIAVDLDRPGIWKHLIGLAKESTGTMTFPLK 446
BLAST of mRNA_P-wetherbeei_contig13896.1.1 vs. uniprot
Match: K0SCQ9_THAOC (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SCQ9_THAOC) HSP 1 Score: 139 bits (349), Expect = 8.680e-36 Identity = 62/109 (56.88%), Postives = 84/109 (77.06%), Query Frame = 1
Query: 28 VQVPYKGKLLESRDLQQQVRQWVEYGTIEPSAGEGLLAVSADNRWRDLSEKYFVLLGAGSAMGPLHLLLELGANVIAIDLDRPGIWKRLLALAQNSPGTMTFPMKAGTK 354
+++ YKGK + +L+ QV+ WV+YGTIEPSAGE ++ + + W DLS+KYFVLLGAGSAMGP +L++LGANV+AIDLDRP IWKRL+ A+ S G++TFP+ K
Sbjct: 360 LEISYKGKQISGEELKAQVKSWVDYGTIEPSAGEAIIKCADNPSWIDLSDKYFVLLGAGSAMGPFEVLMQLGANVVAIDLDRPFIWKRLIERAKKSSGSITFPLTKSQK 468 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13896.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13896.1.1 >prot_P-wetherbeei_contig13896.1.1 ID=prot_P-wetherbeei_contig13896.1.1|Name=mRNA_P-wetherbeei_contig13896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp MGAACCCICVQVPYKGKLLESRDLQQQVRQWVEYGTIEPSAGEGLLAVSAback to top mRNA from alignment at P-wetherbeei_contig13896:773..1756+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13896.1.1 ID=mRNA_P-wetherbeei_contig13896.1.1|Name=mRNA_P-wetherbeei_contig13896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=984bp|location=Sequence derived from alignment at P-wetherbeei_contig13896:773..1756+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13896:773..1756+ >mRNA_P-wetherbeei_contig13896.1.1 ID=mRNA_P-wetherbeei_contig13896.1.1|Name=mRNA_P-wetherbeei_contig13896.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig13896:773..1756+ (Phaeothamnion wetherbeei SAG_119_79)back to top |