mRNA_P-wetherbeei_contig1389.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1389.1.1 vs. uniprot
Match: A0A835ZFJ3_9STRA (TOG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFJ3_9STRA) HSP 1 Score: 184 bits (466), Expect = 3.420e-51 Identity = 79/126 (62.70%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 52 FEHTCQFCGVHDPDFTEEALDLHYWQHCAMLMGCNECGQVVEVVALTEHLLDECPQRAQYVQCPVSGMAVRRADMAGWTASKSCRPPGPAGPGSACPLCFNDVAAAADEDSWKSHLMESCPRNPRR 429
++ TCQFCG D +FTEE LDLHYWQ C MLMGC ECGQV+E+ AL EHLLDEC + +Y +C VSGMAVRR + W S CRPPG G GS CPLCF D+ AA DE+ W++HL+E+CP+NPRR
Sbjct: 759 YQFTCQFCGKFDAEFTEERLDLHYWQACPMLMGCEECGQVIEISALPEHLLDECQEAGKYEECEVSGMAVRREALTEWQRSAHCRPPGRGGIGSVCPLCFKDLGAADDEEVWRAHLIEACPKNPRR 884
BLAST of mRNA_P-wetherbeei_contig1389.1.1 vs. uniprot
Match: D7FPV5_ECTSI (TOG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV5_ECTSI) HSP 1 Score: 181 bits (458), Expect = 3.870e-50 Identity = 76/135 (56.30%), Postives = 99/135 (73.33%), Query Frame = 1
Query: 25 EEEEYDSTDFEHTCQFCGVHDPDFTEEALDLHYWQHCAMLMGCNECGQVVEVVALTEHLLDECPQRAQYVQCPVSGMAVRRADMAGWTASKSCRPPGPAGPGSACPLCFNDVAAAADEDSWKSHLMESCPRNPRR 429
E EE D D +TCQFCG +DP FT+E LD+HYWQ+C +LM C ECGQV+E+ ++ EHLL+EC R Y +C +S +A+R D+ W SKSC+PPG GPGS CPLCF DV +A DE+ W++HL++ C RNPRR
Sbjct: 724 ESEEMDD-DVSYTCQFCGKYDPSFTDEKLDMHYWQNCPLLMSCEECGQVIEISSIPEHLLEECQNRENYTECEISHLAIRIEDLDKWQRSKSCKPPGKGGPGSTCPLCFEDVGSADDEEYWRAHLIDRCTRNPRR 857
BLAST of mRNA_P-wetherbeei_contig1389.1.1 vs. uniprot
Match: A0A7S4D8I8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8I8_HETAK) HSP 1 Score: 144 bits (364), Expect = 8.720e-42 Identity = 62/123 (50.41%), Postives = 74/123 (60.16%), Query Frame = 1
Query: 58 HTCQFCGVHDPDFTEEALDLHYWQHCAMLMGCNECGQVVEVVALTEHLLDECPQRAQYVQCPVSGMAVRRADMAGWTASKSCRPPGPAGPGSACPLCFNDVAAAADEDSWKSHLMESCPRNPR 426
HTCQFCG DPDF EEALDLHYWQ C MLM C EC QV+E+ L EH L EC + +Y++C VSG V + ++ W AS CRP G C LC V E+ W+ HL C +NPR
Sbjct: 11 HTCQFCGARDPDFDEEALDLHYWQDCVMLMSCRECSQVIEIACLAEHYLTECEFKDKYIECDVSGEVVLKDELKEWQASSECRPAADDGGRPRCLLCHRGVGPPEGEEGWRRHLTRDCSQNPR 133
BLAST of mRNA_P-wetherbeei_contig1389.1.1 vs. uniprot
Match: A0A6P6NAA2_CARAU (LOW QUALITY PROTEIN: centrosomal protein of 104 kDa-like n=3 Tax=Carassius auratus TaxID=7957 RepID=A0A6P6NAA2_CARAU) HSP 1 Score: 130 bits (328), Expect = 2.020e-32 Identity = 62/129 (48.06%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 55 EHTCQFCGVHDPDFTEEALDLHYWQHCAMLMGCNECGQVVEVVALTEHLLDECPQRAQYVQCPVSGMAVRRADMAGWTASKSCRPPGPAGPGSACPLCFNDVAAAADEDSWKSHLM--ESCPRNPRRQA 435
++ C FCG D FTE+ LDLHYW+HC ML C +C QVVE+ +LTEHLL EC QRA + QCP+ A+ R ++ S SC PP + CPLC + + E+ WKSHLM E C +N RR+A
Sbjct: 759 DNLCIFCGERDESFTEDGLDLHYWKHCPMLQRCLQCRQVVEIASLTEHLLTECEQRANFTQCPLCSEALTRDELTEHAQSASCNPPASGENCNHCPLCHENFTSG--EEVWKSHLMGIEGCKQNSRRRA 885
BLAST of mRNA_P-wetherbeei_contig1389.1.1 vs. uniprot
Match: K8YQ12_NANGC (AB hydrolase-1 domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQ12_NANGC) HSP 1 Score: 125 bits (315), Expect = 3.840e-31 Identity = 61/131 (46.56%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 55 EHTCQFCGVHDPDFTEEALDLHYWQHCAMLMGCNECGQVVEVVALTEHLLDECPQ-RAQYVQCPVSGMAVRRADMAGWTASKSCRPPGPAGPGSA----CPLCFNDVAAAADEDSWKSHLMESCPRNPRRQ 432
E TCQFCG+H+P FTEEALD HY+ C +LM C ECGQV+E+ L EHLL+EC + R +Y CP SG+AVR+ W G G+ CPLCF + A++E ++H + CPRN RR+
Sbjct: 374 EKTCQFCGLHNPGFTEEALDRHYFTSCPLLMRCRECGQVIEIFGLPEHLLEECEEARGEYEACPASGLAVRKDQREAWRMGPGAYFAEEGGKGAGTKVVCPLCFYAIEPASEE-GVRAHYITRCPRNARRE 503
BLAST of mRNA_P-wetherbeei_contig1389.1.1 vs. uniprot
Match: A0A553PXB1_9TELE (Uncharacterized protein (Fragment) n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553PXB1_9TELE) HSP 1 Score: 125 bits (314), Expect = 1.510e-30 Identity = 62/130 (47.69%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 49 DFEHTCQFCGVHDPDFTEEALDLHYWQHCAMLMGCNECGQVVEVVALTEHLLDECPQRAQYVQCPVSGMAVRRADMAGWTASKSCRPPGPAGPGSACPLCFNDVAAAADEDSWKSHLM--ESCPRNPRRQ 432
D + C FCG D F EE LDLHYW+HC ML C +CGQVVE+ +LTEHLL EC +R + QCP+ A+ R + S +C P G S CPLC + A+ E+ WKSHLM E C +N RR+
Sbjct: 648 DLDKLCIFCGERDESFNEEGLDLHYWKHCPMLQRCLQCGQVVEIASLTEHLLTECERRTAFSQCPLCSEALLRDKLTEHAHSSACNPS--IGNCSHCPLCHENFASG--EEGWKSHLMGPEGCKKNSRRR 773
BLAST of mRNA_P-wetherbeei_contig1389.1.1 vs. uniprot
Match: A0A4D9CPN0_9STRA (UVR domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPN0_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.910e-30 Identity = 61/129 (47.29%), Postives = 78/129 (60.47%), Query Frame = 1
Query: 61 TCQFCGVHDPDFTEEALDLHYWQHCAMLMGCNECGQVVEVVALTEHLLDECPQ-RAQYVQCPVSGMAVRRADMAGWTASKSCRPPGPAGPGSA----CPLCFNDVAAAADEDSWKSHLMESCPRNPRRQ 432
TCQFCG+HDP FTEEALD HY+ C +LM C ECGQV+E+ L EHLL+EC + R +Y C SG+AVRR W G G+ CPLCF + A++E ++H + CPRN RR+
Sbjct: 942 TCQFCGLHDPGFTEEALDRHYFTSCPLLMRCRECGQVIEIFGLPEHLLEECEEARGEYEACRASGLAVRRDQWEAWRTGPGAYFAEEGGKGAGTKVVCPLCFYAIEPASEE-GVRAHYITRCPRNARRE 1069
BLAST of mRNA_P-wetherbeei_contig1389.1.1 vs. uniprot
Match: A0A2R5GHB4_9STRA (Centrosomal protein of 104 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHB4_9STRA) HSP 1 Score: 120 bits (302), Expect = 6.440e-29 Identity = 58/142 (40.85%), Postives = 80/142 (56.34%), Query Frame = 1
Query: 22 AEEEEYDSTDFEH---TCQFCGVHDPDFTEEALDLHYWQHCAMLMGCNECGQVVEVVALTEHLLDECPQRAQYVQCPVSGMAVRRADMAGWTASKSCRPPGPAGPGSACPLCFNDVAAAADEDSWKSHLM--ESCPRNPRRQ 432
A E++ D +E TCQFCG HDP+FT++ALD+HYW+ C ML C +C QV+EV L +HLL+EC + + +CP G A+ SCRP + CPLC DV ED W+ H++ C +NPR +
Sbjct: 890 AVEDDDDDVSYEEEPFTCQFCGRHDPEFTDDALDIHYWKECPMLTSCLQCEQVIEVAMLNDHLLNECEMKHNHERCPRCGEAIAAQYFNQHVKRASCRPSQSVSKANRCPLCHEDVKPG--EDGWREHILIEPGCNKNPRTE 1029
BLAST of mRNA_P-wetherbeei_contig1389.1.1 vs. uniprot
Match: A0A0R3WCY2_TAEAS (Uncharacterized protein n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A0R3WCY2_TAEAS) HSP 1 Score: 112 bits (281), Expect = 3.840e-26 Identity = 57/130 (43.85%), Postives = 75/130 (57.69%), Query Frame = 1
Query: 61 TCQFCGVHDPDFTEEALDLHYWQHCAMLMGCNECGQVVEVVALTEHLLDECPQRAQ---YVQCPVSGMAVRRADMAGWTASKSCRPPGPAGPGSACPLCFNDVA-----AAADEDSWKSHLMESCPRNPR 426
TC FCG + DFTEEALD+HYW+ C ML C+ C QVVEV LTEHLL+ECP+ + Y +C V A+ A + KS P CPLC D+A + +ED+W+ HL++ C +N R
Sbjct: 490 TCIFCGEQNDDFTEEALDMHYWKACPMLRRCSNCKQVVEVAGLTEHLLNECPKSGKLGGYRRCEVCSEAIPNATFITHNSCKSAP-----NPSLRCPLCHTDLADDGVQGSNNEDAWRMHLLKECRQNSR 614
BLAST of mRNA_P-wetherbeei_contig1389.1.1 vs. uniprot
Match: A0A7S3F1X5_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F1X5_9EUKA) HSP 1 Score: 107 bits (266), Expect = 5.220e-26 Identity = 55/123 (44.72%), Postives = 66/123 (53.66%), Query Frame = 1
Query: 61 TCQFCGVHDPDFTEEALDLHYWQHCAMLMGCNECGQVVEVVALTEHLLDECPQRAQYVQCPVSGMAVRRADMAGWTASKSCRPPGPAGPGSACPLCFNDVAAAADEDSWKSHLMESCPRNPRR 429
TCQFCG HDP F EE +DLH+W+ C MLM C++CGQVVEV AL EHL+ EC Q + P G+A AD G CPLC + D + K H+M C NPRR
Sbjct: 116 TCQFCGRHDPSFDEETMDLHFWKDCPMLMPCDQCGQVVEVAALAEHLVTECDQSQDFRYPPPLGVA---ADFTG------------------CPLCGEPLPG--DPAACKDHIMHRCGGNPRR 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1389.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1389.1.1 >prot_P-wetherbeei_contig1389.1.1 ID=prot_P-wetherbeei_contig1389.1.1|Name=mRNA_P-wetherbeei_contig1389.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp EAAAASEAEEEEYDSTDFEHTCQFCGVHDPDFTEEALDLHYWQHCAMLMGback to top mRNA from alignment at P-wetherbeei_contig1389:381..1090+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1389.1.1 ID=mRNA_P-wetherbeei_contig1389.1.1|Name=mRNA_P-wetherbeei_contig1389.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=710bp|location=Sequence derived from alignment at P-wetherbeei_contig1389:381..1090+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1389:381..1090+ >mRNA_P-wetherbeei_contig1389.1.1 ID=mRNA_P-wetherbeei_contig1389.1.1|Name=mRNA_P-wetherbeei_contig1389.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig1389:381..1090+ (Phaeothamnion wetherbeei SAG_119_79)back to top |