mRNA_P-wetherbeei_contig13881.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13881.2.1
Unique NamemRNA_P-wetherbeei_contig13881.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13881.2.1 vs. uniprot
Match: A0A127EUE1_9HYPH (Octaprenyl diphosphate synthase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EUE1_9HYPH)

HSP 1 Score: 429 bits (1103), Expect = 1.680e-149
Identity = 225/252 (89.29%), Postives = 239/252 (94.84%), Query Frame = 1
Query:    4 AVVLPFNQADATIDRLVGLLASDMERVNTAILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAGLTGYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGRQAARMLWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPVLSKRPKAEAAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREGTLTLPVML 759
            AVV+PF+ ADATI+RLV L+ +DM RVN+ ILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLA A L GY+GDGHIKLAAAVEFMHTATLLHDDVVD+S+MRRGR AAR +WGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPVL++R KAEAAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKN GDDFREG +TLPV+L
Sbjct:    2 AVVVPFSPADATIERLVELVNADMGRVNSEILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLATARLNGYSGDGHIKLAAAVEFMHTATLLHDDVVDQSDMRRGRPAARKVWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPVLTQRSKAEAAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNTGDDFREGKITLPVVL 253          
BLAST of mRNA_P-wetherbeei_contig13881.2.1 vs. uniprot
Match: A0A6L5FJX3_9HYPH (Polyprenyl synthetase family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FJX3_9HYPH)

HSP 1 Score: 426 bits (1094), Expect = 4.070e-148
Identity = 223/253 (88.14%), Postives = 241/253 (95.26%), Query Frame = 1
Query:    4 AVVLPF-NQADATIDRLVGLLASDMERVNTAILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAGLTGYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGRQAARMLWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPVLSKRPKAEAAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREGTLTLPVML 759
            AV++PF +++ AT+D+LV L+A+DMERVN AI++RTGS+VTMIPEVANHLISSGGKRLRPMLTLAMA LT Y GDGHIKLAAAVEFMHTATLLHDDVVDESEMRRG+ AARMLWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLG AKNTATTEDEYLAVIRAKTAELFAAACEVGPVL+ RPKAE AACRS+GMNLG+AFQLVDDALDYGGKAAKLGKNVGDDFREG +TLPV+L
Sbjct:    2 AVIVPFESRSAATVDQLVRLVAADMERVNGAIVARTGSDVTMIPEVANHLISSGGKRLRPMLTLAMAQLTHYPGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKLAARMLWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLGVAKNTATTEDEYLAVIRAKTAELFAAACEVGPVLAGRPKAEQAACRSYGMNLGVAFQLVDDALDYGGKAAKLGKNVGDDFREGKITLPVVL 254          
BLAST of mRNA_P-wetherbeei_contig13881.2.1 vs. uniprot
Match: Q13BT7_RHOPS (Farnesyltranstransferase n=9 Tax=Rhodopseudomonas TaxID=1073 RepID=Q13BT7_RHOPS)

HSP 1 Score: 421 bits (1083), Expect = 1.920e-146
Identity = 218/253 (86.17%), Postives = 237/253 (93.68%), Query Frame = 1
Query:    4 AVVLPFN-QADATIDRLVGLLASDMERVNTAILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAGLTGYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGRQAARMLWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPVLSKRPKAEAAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREGTLTLPVML 759
            AVV+PF     ATID+LVGL+A+DMERVN  ILSRTGS+VTMIPEVANHLISSGGKRLRP+LTLAMA LTGYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRG+++ARMLWGNEASVLVGDFLLGQAF+MMVEVGSLRAL+ILS+A+A IAEGEVMQL AAKNTATTEDEYLAVIR KTAELFAAACEVGP ++ RPKAE +ACRSFGMN+GIAFQLVDD LDYGGKAAKLGKNVGDDFREG +TLPV+L
Sbjct:    2 AVVVPFEGPPPATIDQLVGLVAADMERVNATILSRTGSDVTMIPEVANHLISSGGKRLRPILTLAMANLTGYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGKKSARMLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSAASATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPTIADRPKAEQSACRSFGMNIGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254          
BLAST of mRNA_P-wetherbeei_contig13881.2.1 vs. uniprot
Match: A0A0S3PTA5_9BRAD (Octaprenyl-diphosphate synthase n=1 Tax=Variibacter gotjawalensis TaxID=1333996 RepID=A0A0S3PTA5_9BRAD)

HSP 1 Score: 421 bits (1083), Expect = 1.920e-146
Identity = 222/253 (87.75%), Postives = 235/253 (92.89%), Query Frame = 1
Query:    4 AVVLPF-NQADATIDRLVGLLASDMERVNTAILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAGLTGYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGRQAARMLWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPVLSKRPKAEAAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREGTLTLPVML 759
            AVV+PF +Q   +IDRLVGL  +DMERVN  ILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMA L GYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGR+AARMLWGNEASVLVGDFLLGQAF+MMVEVGSLR+LEILSSAAAVIAEGEVMQL AAKNTATTEDEY+AVIRAKTAELFAAACEVGPV++   KAE  ACRSFGMNLGI FQL+DDALDYGGKAAKLGKNVGDDFREG +TLPV+L
Sbjct:    2 AVVVPFESQPTPSIDRLVGLCRADMERVNAMILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAQLAGYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGRKAARMLWGNEASVLVGDFLLGQAFRMMVEVGSLRSLEILSSAAAVIAEGEVMQLAAAKNTATTEDEYVAVIRAKTAELFAAACEVGPVIASLSKAEQTACRSFGMNLGITFQLIDDALDYGGKAAKLGKNVGDDFREGKVTLPVVL 254          
BLAST of mRNA_P-wetherbeei_contig13881.2.1 vs. uniprot
Match: A0A537L438_9PROT (Polyprenyl synthetase family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L438_9PROT)

HSP 1 Score: 420 bits (1080), Expect = 5.490e-146
Identity = 219/253 (86.56%), Postives = 237/253 (93.68%), Query Frame = 1
Query:    4 AVVLPF-NQADATIDRLVGLLASDMERVNTAILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAGLTGYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGRQAARMLWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPVLSKRPKAEAAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREGTLTLPVML 759
            AVV+PF +Q  A++DRLV L+ +DM+RVN  ILSRTGS+VTMIPEVANHLI+SGGKRLRPMLTLAMA LTGY GDGH+KLAAAVEFMHTATLLHDDVVDESEMRRGR AARMLWGNEASVLVGDFLLGQAFKMMVEVGS+RAL+ILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGP L+ R K E AACRS+GMNLGIAFQLVDDALDYGGK+AKLGKNVGDDFR+G +TLPV+L
Sbjct:    2 AVVIPFESQPPASVDRLVDLVTADMDRVNAVILSRTGSDVTMIPEVANHLINSGGKRLRPMLTLAMARLTGYPGDGHVKLAAAVEFMHTATLLHDDVVDESEMRRGRLAARMLWGNEASVLVGDFLLGQAFKMMVEVGSIRALDILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPALAGRSKDEQAACRSYGMNLGIAFQLVDDALDYGGKSAKLGKNVGDDFRDGKITLPVVL 254          
BLAST of mRNA_P-wetherbeei_contig13881.2.1 vs. uniprot
Match: A0A1W9INU3_9PROT (Polyprenyl synthetase n=1 Tax=Proteobacteria bacterium SG_bin9 TaxID=1827385 RepID=A0A1W9INU3_9PROT)

HSP 1 Score: 419 bits (1078), Expect = 1.110e-145
Identity = 219/253 (86.56%), Postives = 234/253 (92.49%), Query Frame = 1
Query:    4 AVVLPF-NQADATIDRLVGLLASDMERVNTAILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAGLTGYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGRQAARMLWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPVLSKRPKAEAAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREGTLTLPVML 759
            AV++PF + A A+ID LVGL+A DMERVN  IL+RTGSEVTMIPEVANHLISSGGKRLRPMLTLAMA LTGY GDGHIKLAAAVEFMHTATLLHDDVVDESE+RRG+ +ARMLWGNEASVLVGDFLLGQAF+MMVEVGSLRAL+ILSSAAA IAEGEVMQL AAKNTATTEDEYLAVIR KTAELFAAACEVGPVL+ RPK+E  ACRS GMNLGIAFQLVDD LDYGGKAAKLGKNVGDDFREG +TLPV+L
Sbjct:    2 AVIVPFESHAAASIDALVGLVAPDMERVNATILARTGSEVTMIPEVANHLISSGGKRLRPMLTLAMANLTGYTGDGHIKLAAAVEFMHTATLLHDDVVDESELRRGKLSARMLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSAAATIAEGEVMQLAAAKNTATTEDEYLAVIRGKTAELFAAACEVGPVLANRPKSEQTACRSVGMNLGIAFQLVDDVLDYGGKAAKLGKNVGDDFREGKITLPVVL 254          
BLAST of mRNA_P-wetherbeei_contig13881.2.1 vs. uniprot
Match: A0A521VSR1_9HYPH (Polyprenyl synthetase family protein n=1 Tax=Xanthobacteraceae bacterium TaxID=2021379 RepID=A0A521VSR1_9HYPH)

HSP 1 Score: 418 bits (1075), Expect = 3.280e-145
Identity = 217/254 (85.43%), Postives = 233/254 (91.73%), Query Frame = 1
Query:    4 AVVLPFNQADAT--IDRLVGLLASDMERVNTAILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAGLTGYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGRQAARMLWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPVLSKRPKAEAAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREGTLTLPVML 759
            AVV+PF     T  +D+LV L+A+DM RVNT ILSRTGS+V MIPEVANHLISSGGKRLRPMLTLAMA LTGY+GDGH+KLAAAVEFMHTATLLHDDVVDES+MRRG+ AARMLWGNEASVLVGDFLLGQAF+MMVEVGSLRAL+ILSSAA  IAEGEVMQL AAKNTATTEDEYLAV+R KTAELFAAACEVGPVL+ RPKAE  ACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREG +TLPV+L
Sbjct:    2 AVVVPFESPSPTPSVDQLVALVAADMARVNTTILSRTGSDVAMIPEVANHLISSGGKRLRPMLTLAMADLTGYSGDGHVKLAAAVEFMHTATLLHDDVVDESDMRRGKLAARMLWGNEASVLVGDFLLGQAFRMMVEVGSLRALDILSSAACTIAEGEVMQLAAAKNTATTEDEYLAVVRGKTAELFAAACEVGPVLASRPKAEQVACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREGKITLPVVL 255          
BLAST of mRNA_P-wetherbeei_contig13881.2.1 vs. uniprot
Match: A0A0Q7TN52_9HYPH (Polyprenyl synthetase n=3 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A0Q7TN52_9HYPH)

HSP 1 Score: 418 bits (1074), Expect = 4.490e-145
Identity = 221/253 (87.35%), Postives = 237/253 (93.68%), Query Frame = 1
Query:    4 AVVLPF-NQADATIDRLVGLLASDMERVNTAILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAGLTGYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGRQAARMLWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPVLSKRPKAEAAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREGTLTLPVML 759
            AVV+PF N   A+I+RLV LLA  MERVN+ IL RTGS+VTMIPEVANHLISSGGKRLRPMLTLAMA L+GYAGDGHIKLAAAVEFMHTATLLHDDVVD+S+MRRG+QAARMLWGNEASVLVGDFLLGQAFKMMVEVG+L AL+ILSSAAAVIAEGEVMQLGAAKNTAT EDEYLAVIRAKTAELFAAACEVGPVL+ R KAE AACRS+GMNLGIAFQLVDDALDYGGK+AKLGKNVGDDFREG +TLPV+L
Sbjct:    2 AVVVPFENPQAASIERLVKLLAPAMERVNSTILDRTGSDVTMIPEVANHLISSGGKRLRPMLTLAMAQLSGYAGDGHIKLAAAVEFMHTATLLHDDVVDQSDMRRGKQAARMLWGNEASVLVGDFLLGQAFKMMVEVGNLTALDILSSAAAVIAEGEVMQLGAAKNTATNEDEYLAVIRAKTAELFAAACEVGPVLAGRDKAEIAACRSYGMNLGIAFQLVDDALDYGGKSAKLGKNVGDDFREGKITLPVVL 254          
BLAST of mRNA_P-wetherbeei_contig13881.2.1 vs. uniprot
Match: A0A537ND92_9PROT (Polyprenyl synthetase family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537ND92_9PROT)

HSP 1 Score: 418 bits (1074), Expect = 4.490e-145
Identity = 218/253 (86.17%), Postives = 238/253 (94.07%), Query Frame = 1
Query:    4 AVVLPF-NQADATIDRLVGLLASDMERVNTAILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAGLTGYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGRQAARMLWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPVLSKRPKAEAAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREGTLTLPVML 759
            AV++PF +++ ++IDRLV L+A+DM+RVN AIL+RTGS V MIPEVANHLISSGGKRLRP+LTLAMA L GYAGDGH+KLAAAVEFMHTATLLHDDVVDESEMRRGR AARMLWGNEASVLVGDFLLGQAFKMMVEV SL+AL+ILSSAAAVIAEGEVMQLGAAKNTATTED+YLAVIRAKTAELFAAACEVGP L+ RP+ E AACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREG +TLPV+L
Sbjct:    2 AVIVPFESRSTSSIDRLVELVAADMQRVNAAILARTGSRVAMIPEVANHLISSGGKRLRPILTLAMARLVGYAGDGHVKLAAAVEFMHTATLLHDDVVDESEMRRGRLAARMLWGNEASVLVGDFLLGQAFKMMVEVASLKALDILSSAAAVIAEGEVMQLGAAKNTATTEDDYLAVIRAKTAELFAAACEVGPALAGRPRDEQAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREGKITLPVVL 254          
BLAST of mRNA_P-wetherbeei_contig13881.2.1 vs. uniprot
Match: A0A537UAM2_9PROT (Polyprenyl synthetase family protein n=3 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A537UAM2_9PROT)

HSP 1 Score: 417 bits (1072), Expect = 9.050e-145
Identity = 220/253 (86.96%), Postives = 235/253 (92.89%), Query Frame = 1
Query:    4 AVVLPFN-QADATIDRLVGLLASDMERVNTAILSRTGSEVTMIPEVANHLISSGGKRLRPMLTLAMAGLTGYAGDGHIKLAAAVEFMHTATLLHDDVVDESEMRRGRQAARMLWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAAAVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPVLSKRPKAEAAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREGTLTLPVML 759
            AVV+PF  ++ ATIDRL  L+++DMERVNT ILSRTGS+V MIPEVANHLISSGGKRLRP+LTLAMA L GYAG GH+KLAAAVEFMHTATLLHDDVVDESEMRRG+ AARMLWGNEASVLVGDFLLGQAFKMMVEV SLRALEILSSAAAVIAEGEVMQLGAAKNTATTED+YLAVIRAKTAELFAAACEVGP L+ RPK E +ACRSFGMNLGIAFQLVDDALDYGG AAKLGKNVGDDFREG +TLPV+L
Sbjct:    2 AVVVPFETRSPATIDRLSELVSADMERVNTTILSRTGSQVAMIPEVANHLISSGGKRLRPILTLAMARLAGYAGAGHVKLAAAVEFMHTATLLHDDVVDESEMRRGKLAARMLWGNEASVLVGDFLLGQAFKMMVEVASLRALEILSSAAAVIAEGEVMQLGAAKNTATTEDDYLAVIRAKTAELFAAACEVGPALASRPKDEQSACRSFGMNLGIAFQLVDDALDYGGTAAKLGKNVGDDFREGKITLPVVL 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13881.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127EUE1_9HYPH1.680e-14989.29Octaprenyl diphosphate synthase n=1 Tax=Rhodoplane... [more]
A0A6L5FJX3_9HYPH4.070e-14888.14Polyprenyl synthetase family protein n=1 Tax=Hypho... [more]
Q13BT7_RHOPS1.920e-14686.17Farnesyltranstransferase n=9 Tax=Rhodopseudomonas ... [more]
A0A0S3PTA5_9BRAD1.920e-14687.75Octaprenyl-diphosphate synthase n=1 Tax=Variibacte... [more]
A0A537L438_9PROT5.490e-14686.56Polyprenyl synthetase family protein n=1 Tax=Alpha... [more]
A0A1W9INU3_9PROT1.110e-14586.56Polyprenyl synthetase n=1 Tax=Proteobacteria bacte... [more]
A0A521VSR1_9HYPH3.280e-14585.43Polyprenyl synthetase family protein n=1 Tax=Xanth... [more]
A0A0Q7TN52_9HYPH4.490e-14587.35Polyprenyl synthetase n=3 Tax=unclassified Pseudol... [more]
A0A537ND92_9PROT4.490e-14586.17Polyprenyl synthetase family protein n=1 Tax=Alpha... [more]
A0A537UAM2_9PROT9.050e-14586.96Polyprenyl synthetase family protein n=3 Tax=uncla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13881contigP-wetherbeei_contig13881:1022..1780 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1298867.AUES01000017_gene4032
Preferred nameispB
PFAMspolyprenyl_synt
Model size759
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00279
KEGG koko:K02523
KEGG ReactionR09248
KEGG Pathwayko00900,ko01110,map00900,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009108,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0042180,GO:0042181,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901615,GO:1901617,GO:1901661,GO:1901663
Exons1
Evalue1.1e-147
EggNOG OGsCOG0142@1|root,COG0142@2|Bacteria,1MUK6@1224|Proteobacteria,2TSDZ@28211|Alphaproteobacteria,3JRJF@41294|Bradyrhizobiaceae
EC2.5.1.90
DescriptionBelongs to the FPP GGPP synthase family
Cds size759
COG categoryH
BRITEko00000,ko00001,ko01000,ko01006
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186000.3623776-CDS-P-wetherbeei_contig13881:1021..17801683186000.3623776-CDS-P-wetherbeei_contig13881:1021..1780Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13881 1022..1780 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13881.2.1prot_P-wetherbeei_contig13881.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13881 1022..1780 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13881.2.1

>prot_P-wetherbeei_contig13881.2.1 ID=prot_P-wetherbeei_contig13881.2.1|Name=mRNA_P-wetherbeei_contig13881.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=253bp
VAVVLPFNQADATIDRLVGLLASDMERVNTAILSRTGSEVTMIPEVANHL
ISSGGKRLRPMLTLAMAGLTGYAGDGHIKLAAAVEFMHTATLLHDDVVDE
SEMRRGRQAARMLWGNEASVLVGDFLLGQAFKMMVEVGSLRALEILSSAA
AVIAEGEVMQLGAAKNTATTEDEYLAVIRAKTAELFAAACEVGPVLSKRP
KAEAAACRSFGMNLGIAFQLVDDALDYGGKAAKLGKNVGDDFREGTLTLP
VML
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mRNA from alignment at P-wetherbeei_contig13881:1022..1780+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13881.2.1 ID=mRNA_P-wetherbeei_contig13881.2.1|Name=mRNA_P-wetherbeei_contig13881.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=759bp|location=Sequence derived from alignment at P-wetherbeei_contig13881:1022..1780+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGCCGTCGTTCTTCCCTTCAACCAGGCGGATGCCACCATCGACCGCCT AGTGGGCCTTCTCGCGTCCGACATGGAACGCGTCAACACCGCCATCCTGT CGCGCACCGGCTCCGAAGTGACGATGATTCCGGAGGTTGCCAACCACCTT ATTTCATCCGGCGGCAAGCGGCTGCGCCCGATGCTGACGCTCGCCATGGC CGGACTGACAGGCTATGCCGGCGACGGCCATATCAAGCTCGCAGCCGCCG TCGAGTTCATGCACACGGCGACGCTGCTGCACGACGATGTCGTCGACGAG AGCGAGATGCGCCGCGGCCGCCAGGCCGCCCGCATGTTGTGGGGCAACGA AGCCAGCGTGCTGGTCGGCGACTTCCTGCTCGGCCAGGCATTCAAGATGA TGGTTGAGGTCGGCTCGCTGCGCGCGCTGGAAATCCTGTCCTCCGCGGCG GCCGTGATCGCCGAGGGTGAAGTGATGCAACTCGGCGCCGCCAAGAACAC CGCGACCACCGAAGACGAATATCTGGCGGTGATCCGCGCCAAGACCGCCG AGCTGTTCGCCGCCGCCTGCGAGGTCGGGCCGGTGCTCTCCAAGCGGCCG AAGGCCGAGGCTGCGGCGTGCCGGTCGTTCGGCATGAATCTCGGCATCGC GTTCCAGCTCGTCGACGATGCGCTCGACTACGGCGGCAAGGCCGCCAAGC TCGGCAAGAACGTCGGCGACGATTTCCGCGAGGGCACGCTCACGCTGCCG GTGATGCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13881:1022..1780+

>mRNA_P-wetherbeei_contig13881.2.1 ID=mRNA_P-wetherbeei_contig13881.2.1|Name=mRNA_P-wetherbeei_contig13881.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=759bp|location=Sequence derived from alignment at P-wetherbeei_contig13881:1022..1780+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGCCGTCGTTCTTCCCTTCAACCAGGCGGATGCCACCATCGACCGCCT
AGTGGGCCTTCTCGCGTCCGACATGGAACGCGTCAACACCGCCATCCTGT
CGCGCACCGGCTCCGAAGTGACGATGATTCCGGAGGTTGCCAACCACCTT
ATTTCATCCGGCGGCAAGCGGCTGCGCCCGATGCTGACGCTCGCCATGGC
CGGACTGACAGGCTATGCCGGCGACGGCCATATCAAGCTCGCAGCCGCCG
TCGAGTTCATGCACACGGCGACGCTGCTGCACGACGATGTCGTCGACGAG
AGCGAGATGCGCCGCGGCCGCCAGGCCGCCCGCATGTTGTGGGGCAACGA
AGCCAGCGTGCTGGTCGGCGACTTCCTGCTCGGCCAGGCATTCAAGATGA
TGGTTGAGGTCGGCTCGCTGCGCGCGCTGGAAATCCTGTCCTCCGCGGCG
GCCGTGATCGCCGAGGGTGAAGTGATGCAACTCGGCGCCGCCAAGAACAC
CGCGACCACCGAAGACGAATATCTGGCGGTGATCCGCGCCAAGACCGCCG
AGCTGTTCGCCGCCGCCTGCGAGGTCGGGCCGGTGCTCTCCAAGCGGCCG
AAGGCCGAGGCTGCGGCGTGCCGGTCGTTCGGCATGAATCTCGGCATCGC
GTTCCAGCTCGTCGACGATGCGCTCGACTACGGCGGCAAGGCCGCCAAGC
TCGGCAAGAACGTCGGCGACGATTTCCGCGAGGGCACGCTCACGCTGCCG
GTGATGCTG
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