mRNA_P-wetherbeei_contig13862.1.5 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13862.1.5
Unique NamemRNA_P-wetherbeei_contig13862.1.5
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13862.1.5 vs. uniprot
Match: A0A7C4Y0G1_9HYPH (Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4Y0G1_9HYPH)

HSP 1 Score: 274 bits (701), Expect = 1.280e-90
Identity = 146/223 (65.47%), Postives = 177/223 (79.37%), Query Frame = 1
Query:    1 MLNKSEPTAERPEAVVIKKYANRRLYNTDTSTYVTLEDLGAMVRADRDFVVFDAKTGDDLTHTVLTQIIVEQEGKAGGQNLLPVPFLRQLIRFYDDAIGKMVPSYLQFSLESLVHEQVRLREQFAPLFQQNPFGAAAFEALQAQTRKNVAMFEQALSVWAPFAASKAGAGNFPGFPPGMGMPAPSSEASAEAKPGGAADELAELKAEFAKMQARIEKLSKTRS 669
            MLNK E  +E+ EAVVIKKYANRRLYNT+TSTYVTLEDL AMVR+DRDFVV+DAKTGDDLTH+VLTQIIVEQEG+AGGQ LLP+PFLRQLIRFYDD+IGKMVP+YLQFSLE+LV EQ R R QFA LF +NPFGAAAFEALQ QTR+N+A+FEQA+++W+PF+++++ +       P    P      +   +  GA  E+AELKAE      +IE+LS+  S
Sbjct:    1 MLNKPEAPSEKREAVVIKKYANRRLYNTETSTYVTLEDLAAMVRSDRDFVVYDAKTGDDLTHSVLTQIIVEQEGRAGGQALLPIPFLRQLIRFYDDSIGKMVPTYLQFSLETLVKEQERFRAQFAHLFGKNPFGAAAFEALQEQTRRNMAIFEQAMAMWSPFSSARSSS------EPSAAQPQSGQRTAESEEKSGAGSEIAELKAEXXXXXXKIERLSQKNS 217          
BLAST of mRNA_P-wetherbeei_contig13862.1.5 vs. uniprot
Match: A0A2W4S187_9PROT (Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4S187_9PROT)

HSP 1 Score: 259 bits (663), Expect = 9.360e-85
Identity = 137/223 (61.43%), Postives = 172/223 (77.13%), Query Frame = 1
Query:    1 MLNKSEPTAERPEAVVIKKYANRRLYNTDTSTYVTLEDLGAMVRADRDFVVFDAKTGDDLTHTVLTQIIVEQEGKAGGQNLLPVPFLRQLIRFYDDAIGKMVPSYLQFSLESLVHEQVRLREQFAPLFQQNPFGAAAFEALQAQTRKNVAMFEQALSVWAPFAASKAGAGNFPGFPPGMGMPAPSSEASAEAKPGGAADELAELKAEFAKMQARIEKLSKTRS 669
            ML+K++P AE+ EAVVIKKYANRRLYNT+TSTYVTLEDL AMVR+DRDFVV+DAKTG+DLTH+VLTQIIVEQEG++GGQ LLP+PFLRQLIRFYDD+I +M+PSYLQ SLE+LV EQ R R QF+ +  QNPFGAAA +A+Q Q RKN+AMFE+A+++W+PF  ++           G         AS +A       E+ +LKA+ A MQ R+EKLS+ +S
Sbjct:    1 MLSKNDPPAEKKEAVVIKKYANRRLYNTETSTYVTLEDLAAMVRSDRDFVVYDAKTGEDLTHSVLTQIIVEQEGRSGGQTLLPIPFLRQLIRFYDDSIARMIPSYLQMSLETLVKEQERFRAQFSHMLGQNPFGAAALDAMQEQARKNIAMFEKAMAMWSPFGGAQGPDAKQEEKRSGSEKEDGGEPASKKASQSADKSEIEDLKAQLASMQERLEKLSQKQS 223          
BLAST of mRNA_P-wetherbeei_contig13862.1.5 vs. uniprot
Match: A0A6I0EBK9_HYPSQ (Polyhydroxyalkanoate synthesis repressor PhaR n=3 Tax=Hyphomicrobium TaxID=81 RepID=A0A6I0EBK9_HYPSQ)

HSP 1 Score: 250 bits (639), Expect = 2.510e-81
Identity = 145/224 (64.73%), Postives = 169/224 (75.45%), Query Frame = 1
Query:    1 MLNKSEPTAERPEAVVIKKYANRRLYNTDTSTYVTLEDLGAMVRADRDFVVFDAKTGDDLTHTVLTQIIVEQEGKAGGQNLLPVPFLRQLIRFYDDAIGKMVPSYLQFSLESLVHEQVRLREQFAPLFQQNPFGAAAFEALQAQTRKNVAMFEQALSVWAPFAASKAGAGNFPGFPPGMGMPAPSSEASAEAKPGGAAD--ELAELKAEFAKMQARIEKLSKTR 666
            MLNK +  A++ EAVVIKKYANRRLYNT+TSTYVTLEDL AMVR+DRDFVV+DAKTGDDLTH+VLTQIIVEQE + GGQ LLPVPFLRQLIRFYDD+IG+MVP YLQFSLE+LV EQ ++R QFA  F  NP  AAAFE  Q Q RKN+ MFEQALS+W+PF              PG        +A+ EAK   AAD  E++ELKA+ A MQ +I+KLS+ R
Sbjct:    1 MLNKPDAPADKKEAVVIKKYANRRLYNTETSTYVTLEDLAAMVRSDRDFVVYDAKTGDDLTHSVLTQIIVEQENRQGGQTLLPVPFLRQLIRFYDDSIGRMVPGYLQFSLENLVKEQEKIRAQFATAFS-NP--AAAFEVYQDQARKNMQMFEQALSMWSPFTGM-----------PGKRGEGKGDKAAPEAK---AADPNEISELKAQLANMQQKIDKLSQDR 207          
BLAST of mRNA_P-wetherbeei_contig13862.1.5 vs. uniprot
Match: A0A7Y4XG43_HYPSQ (Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y4XG43_HYPSQ)

HSP 1 Score: 248 bits (633), Expect = 2.670e-80
Identity = 141/222 (63.51%), Postives = 167/222 (75.23%), Query Frame = 1
Query:    1 MLNKSEPTAERPEAVVIKKYANRRLYNTDTSTYVTLEDLGAMVRADRDFVVFDAKTGDDLTHTVLTQIIVEQEGKAGGQNLLPVPFLRQLIRFYDDAIGKMVPSYLQFSLESLVHEQVRLREQFAPLFQQNPFGAAAFEALQAQTRKNVAMFEQALSVWAPFAASKAGAGNFPGFPPGMGMPAPSSEASAEAKPGGAADELAELKAEFAKMQARIEKLSKTR 666
            MLN +EP A + EAVVIKKYANRRLYNT+TSTYVTLEDL  MVR DRDFVV+DAK GDDLTH VLTQIIVEQEG+ GGQ LLP+PFLRQLIRFYDD+I +MVPSYLQFSLE LV EQ R REQFA  F  NP  AAAFE  Q+Q ++N+AMFEQA+S+WA F A+   AG      PGM            ++   + DEL++LKA+ + MQ +IEKLS+++
Sbjct:    1 MLNPTEPQAAKREAVVIKKYANRRLYNTETSTYVTLEDLAKMVRGDRDFVVYDAKNGDDLTHAVLTQIIVEQEGREGGQALLPIPFLRQLIRFYDDSIARMVPSYLQFSLEHLVKEQTRFREQFATAFT-NP--AAAFEFYQSQAKQNMAMFEQAMSMWASFGAA---AGGPKPTMPGMXXXXXXXXXXETSRNNKSGDELSDLKAQLSAMQQKIEKLSQSK 216          
BLAST of mRNA_P-wetherbeei_contig13862.1.5 vs. uniprot
Match: UPI0009312897 (polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI0009312897)

HSP 1 Score: 247 bits (631), Expect = 3.860e-80
Identity = 140/222 (63.06%), Postives = 163/222 (73.42%), Query Frame = 1
Query:    1 MLNKSEPTAERPEAVVIKKYANRRLYNTDTSTYVTLEDLGAMVRADRDFVVFDAKTGDDLTHTVLTQIIVEQEGKAGGQNLLPVPFLRQLIRFYDDAIGKMVPSYLQFSLESLVHEQVRLREQFAPLFQQNPFGAAAFEALQAQTRKNVAMFEQALSVWAPFAASKAGAGNFPGFPPGMGMPAPSSEASAEAKPG---GAADELAELKAEFAKMQARIEKLS 657
            MLNK +  A++ EAVVIKKYANRRLYNT+TSTYVTLEDL +MVR+DRDFVV+DAKTGDDLTH+VLTQIIVEQE + GGQ LLPVPFLRQLIRFYDD+IG+MVP YLQFSLE+LV EQ ++R QFA  F  NP   AAFE  Q Q RKN+ MFEQALS+W+PF                 G+P      +   KPG   G A E+ ELKA+ A MQ +I+KLS
Sbjct:    1 MLNKPDAPADKREAVVIKKYANRRLYNTETSTYVTLEDLASMVRSDRDFVVYDAKTGDDLTHSVLTQIIVEQENRQGGQTLLPVPFLRQLIRFYDDSIGRMVPGYLQFSLENLVKEQEKIRAQFATAFS-NP--TAAFEVYQDQARKNMQMFEQALSMWSPF----------------TGVPGTGKMRTEGEKPGAKPGEASEITELKAQLASMQQKIDKLS 203          
BLAST of mRNA_P-wetherbeei_contig13862.1.5 vs. uniprot
Match: A0A2W4KY94_9PROT (Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KY94_9PROT)

HSP 1 Score: 246 bits (627), Expect = 2.660e-79
Identity = 136/229 (59.39%), Postives = 167/229 (72.93%), Query Frame = 1
Query:    1 MLNKSEPTAERPEAVVIKKYANRRLYNTDTSTYVTLEDLGAMVRADRDFVVFDAKTGDDLTHTVLTQIIVEQEGKAGGQNLLPVPFLRQLIRFYDDAIGKMVPSYLQFSLESLVHEQVRLREQFAPLFQQNPFGAAAFEALQAQTRKNVAMFEQALSVWAPFAASKAGAGNFPGFPPGMGMPA------PSSEASAEAKPGGAADELAELKAEFAKMQARIEKLSKTRS 669
            ML+K++P +E+ EAVVIKKYANRRLYNT+TSTYVTLEDL AMVR+DRDFVV+DAKTG+DLTH+VLTQIIVEQEG++GGQ LLP+PFLRQLIRFYDD+I +MVPSYLQ SLE L  EQ R R Q + +  QNPFGAAA +A+Q Q RKN+AMFE+A+++W PF A                         PS E  +++       EL  LKA+ A MQ +IE+LS+ RS
Sbjct:    1 MLSKNDPPSEKKEAVVIKKYANRRLYNTETSTYVTLEDLAAMVRSDRDFVVYDAKTGEDLTHSVLTQIIVEQEGRSGGQTLLPIPFLRQLIRFYDDSIARMVPSYLQMSLEMLAKEQERFRAQLSNMMGQNPFGAAALDAMQEQARKNLAMFEKAMAMWTPFGAPPXXXXXXXXXXXXXXXXXXXXXXKPSEEDDSKS-------ELEALKAQLASMQEKIERLSQKRS 222          
BLAST of mRNA_P-wetherbeei_contig13862.1.5 vs. uniprot
Match: D8JU20_HYPDA (Polyhydroxyalkonate synthesis repressor, PhaR n=4 Tax=Hyphomicrobium TaxID=81 RepID=D8JU20_HYPDA)

HSP 1 Score: 245 bits (625), Expect = 4.690e-79
Identity = 143/224 (63.84%), Postives = 167/224 (74.55%), Query Frame = 1
Query:    1 MLNKSEPTAERP--EAVVIKKYANRRLYNTDTSTYVTLEDLGAMVRADRDFVVFDAKTGDDLTHTVLTQIIVEQEGKAGGQNLLPVPFLRQLIRFYDDAIGKMVPSYLQFSLESLVHEQVRLREQFAPLFQQNPFGAAAFEALQAQTRKNVAMFEQALSVWAPFAASKAGAGNFPGFPPGMGMPAPSSEASAEAKPGGAADELAELKAEFAKMQARIEKLSKTR 666
            ML+  EP  + P  EAVVIKKYANRRLYNT+TSTYVTLEDL  MVR DRDFVV+DAK GDDLTH VLTQIIVEQE + GGQ LLP+PFLRQLIRFYDD+I +MVPSYLQFSLE L  EQVR REQFA  F  NP  AAAFE  Q Q R+N+AMFEQA+S+WA F ++ +G       P      AP   A ++A  GG  DEL+ELK++ + MQ +IEKLS++R
Sbjct:    1 MLSNPEPQTQAPKREAVVIKKYANRRLYNTETSTYVTLEDLAKMVRGDRDFVVYDAKNGDDLTHAVLTQIIVEQESREGGQALLPIPFLRQLIRFYDDSIARMVPSYLQFSLEHLAKEQVRFREQFASAFS-NP--AAAFEFYQQQARQNMAMFEQAMSMWASFGSAASGQRGEGKSPEAAQPQAP---AQSDASTGGR-DELSELKSQLSAMQQKIEKLSQSR 217          
BLAST of mRNA_P-wetherbeei_contig13862.1.5 vs. uniprot
Match: UPI0015E7B228 (polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Hyphomicrobium methylovorum TaxID=84 RepID=UPI0015E7B228)

HSP 1 Score: 242 bits (618), Expect = 5.410e-78
Identity = 143/225 (63.56%), Postives = 170/225 (75.56%), Query Frame = 1
Query:    1 MLNKSEPTAERP--EAVVIKKYANRRLYNTDTSTYVTLEDLGAMVRADRDFVVFDAKTGDDLTHTVLTQIIVEQEGKAGGQNLLPVPFLRQLIRFYDDAIGKMVPSYLQFSLESLVHEQVRLREQFAPLFQQNPFGAAAFEALQAQTRKNVAMFEQALSVWAPFAASKAGAGNFPGFPPGMGMPAPSSEASAEAKPGGAADELAELKAEFAKMQARIEKLSKTRS 669
            ML   +P A+ P  EAVV+KKYANRRLYNT+TSTYVTLEDL  MVR DRDFVV+DAK GDDLTH VLTQIIVEQE + GGQ LLP+PFLRQLIRFYDD+I +MVPSYLQFSLE L  EQ R REQFA  F  NP  AAAFE  Q Q R+N+AMFEQA+S+WA F A+ +   +  G  PG G  A +++ SA A  GG  +EL ELK++ + MQ +IEKLS++R+
Sbjct:    1 MLTNPDPQAQAPKREAVVVKKYANRRLYNTETSTYVTLEDLAKMVRGDRDFVVYDAKNGDDLTHAVLTQIIVEQESREGGQALLPIPFLRQLIRFYDDSIARMVPSYLQFSLEHLAKEQTRFREQFASAFS-NP--AAAFEFYQQQARQNMAMFEQAMSMWASFGAAASPPRS--GAKPGEGEAAGTAQ-SAPAS-GGEHNELNELKSQLSAMQQKIEKLSQSRT 218          
BLAST of mRNA_P-wetherbeei_contig13862.1.5 vs. uniprot
Match: A0A0D6JEF5_9HYPH (Polyhydroxyalkonate synthesis repressor PhaR n=1 Tax=Candidatus Filomicrobium marinum TaxID=1608628 RepID=A0A0D6JEF5_9HYPH)

HSP 1 Score: 242 bits (617), Expect = 7.190e-78
Identity = 140/221 (63.35%), Postives = 169/221 (76.47%), Query Frame = 1
Query:    1 MLNKSEPTAERPEAVVIKKYANRRLYNTDTSTYVTLEDLGAMVRADRDFVVFDAKTGDDLTHTVLTQIIVEQEGKAGGQNLLPVPFLRQLIRFYDDAIGKMVPSYLQFSLESLVHEQVRLREQFAPLFQQNPFGAAAFEALQAQTRKNVAMFEQALSVWAPFAASKAGAGNFPGFPPGMGMPAPSSEA-SAEAKPGGAADELAELKAEFAKMQARIEKLSK 660
            MLNK E + E+ E VVIKKYANRRLYNT+TSTYVTL+DL AMVR+DRDFVV+DAKTGD+LTH+VLTQIIV+QE K  GQ LLP+PFLRQLIRFYDD+I +MVP+YLQFSLE+LV EQ R R QFA  F  NP  +AAFEA Q Q R+N+A+FEQA+S+W PF+   A A       P  G    SSE+ SA A    + D++AELK++ A MQ +IEKLS+
Sbjct:    1 MLNKPEASGEKRETVVIKKYANRRLYNTETSTYVTLDDLAAMVRSDRDFVVYDAKTGDELTHSVLTQIIVDQESK--GQTLLPIPFLRQLIRFYDDSIARMVPTYLQFSLEALVKEQERFRSQFATAFG-NP--SAAFEAYQEQARRNMAIFEQAMSMWTPFSPKGADAAQ---STPQPGSETESSESGSASATNSASLDDIAELKSQLAAMQQKIEKLSR 213          
BLAST of mRNA_P-wetherbeei_contig13862.1.5 vs. uniprot
Match: A0A3N5MBP3_9HYPH (Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5MBP3_9HYPH)

HSP 1 Score: 238 bits (607), Expect = 1.820e-76
Identity = 133/222 (59.91%), Postives = 167/222 (75.23%), Query Frame = 1
Query:    1 MLNKSEPTAERPEAVVIKKYANRRLYNTDTSTYVTLEDLGAMVRADRDFVVFDAKTGDDLTHTVLTQIIVEQEGKAGGQNLLPVPFLRQLIRFYDDAIGKMVPSYLQFSLESLVHEQVRLREQFAPLFQQNPFGAAAFEALQAQTRKNVAMFEQALSVWAPFAASKAGAGNFPGFPPGMGMPAPSSEASAEAKPGGAADELAELKAEFAKMQARIEKLSKTR 666
            MLNKS+P +++ E VVIKKYANRRLYNT+TSTYVTL+DL AMV+++RDFVVFDAKTGDDLTH+VLTQIIVEQE + G Q LLP+PFLRQLIRFY D+I ++VPSYLQ SL++L  EQ R R+ FA  F   P GA  FEA Q Q RKN+AMFEQA+++++PF  + A            G     +EAS +   GG  D+LAELK++ A+MQA++EKLS+ R
Sbjct:    1 MLNKSDPPSDKKEPVVIKKYANRRLYNTETSTYVTLDDLAAMVKSERDFVVFDAKTGDDLTHSVLTQIIVEQESRMGTQTLLPIPFLRQLIRFYGDSIERLVPSYLQISLDTLTKEQERFRKTFAGAF--TPAGA--FEAYQEQARKNLAMFEQAMAMFSPFKGAGA-----------QGPLKLEAEASKDVAKGGKTDDLAELKSQLAEMQAKVEKLSRDR 207          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13862.1.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4Y0G1_9HYPH1.280e-9065.47Polyhydroxyalkanoate synthesis repressor PhaR n=1 ... [more]
A0A2W4S187_9PROT9.360e-8561.43Polyhydroxyalkanoate synthesis repressor PhaR n=1 ... [more]
A0A6I0EBK9_HYPSQ2.510e-8164.73Polyhydroxyalkanoate synthesis repressor PhaR n=3 ... [more]
A0A7Y4XG43_HYPSQ2.670e-8063.51Polyhydroxyalkanoate synthesis repressor PhaR n=1 ... [more]
UPI00093128973.860e-8063.06polyhydroxyalkanoate synthesis repressor PhaR n=1 ... [more]
A0A2W4KY94_9PROT2.660e-7959.39Polyhydroxyalkanoate synthesis repressor PhaR n=1 ... [more]
D8JU20_HYPDA4.690e-7963.84Polyhydroxyalkonate synthesis repressor, PhaR n=4 ... [more]
UPI0015E7B2285.410e-7863.56polyhydroxyalkanoate synthesis repressor PhaR n=1 ... [more]
A0A0D6JEF5_9HYPH7.190e-7863.35Polyhydroxyalkonate synthesis repressor PhaR n=1 T... [more]
A0A3N5MBP3_9HYPH1.820e-7659.91Polyhydroxyalkanoate synthesis repressor PhaR n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13862contigP-wetherbeei_contig13862:975..1718 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog582899.Hden_2772
Preferred namephaR
PFAMsPHB_acc,PHB_acc_N
Model size672
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons2
Evalue7.68e-80
EggNOG OGsCOG5394@1|root,COG5394@2|Bacteria,1RHRC@1224|Proteobacteria,2TQWQ@28211|Alphaproteobacteria,3N8EU@45401|Hyphomicrobiaceae
Descriptionsynthesis repressor PhaR
Cds size672
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185999.5751894-CDS-P-wetherbeei_contig13862:974..15211683185999.5751894-CDS-P-wetherbeei_contig13862:974..1521Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13862 975..1521 +
1683185999.5858476-CDS-P-wetherbeei_contig13862:1593..17181683185999.5858476-CDS-P-wetherbeei_contig13862:1593..1718Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13862 1594..1718 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13862.1.5prot_P-wetherbeei_contig13862.1.5Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13862 975..1718 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13862.1.5

>prot_P-wetherbeei_contig13862.1.5 ID=prot_P-wetherbeei_contig13862.1.5|Name=mRNA_P-wetherbeei_contig13862.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=224bp
MLNKSEPTAERPEAVVIKKYANRRLYNTDTSTYVTLEDLGAMVRADRDFV
VFDAKTGDDLTHTVLTQIIVEQEGKAGGQNLLPVPFLRQLIRFYDDAIGK
MVPSYLQFSLESLVHEQVRLREQFAPLFQQNPFGAAAFEALQAQTRKNVA
MFEQALSVWAPFAASKAGAGNFPGFPPGMGMPAPSSEASAEAKPGGAADE
LAELKAEFAKMQARIEKLSKTRS*
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mRNA from alignment at P-wetherbeei_contig13862:975..1718+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13862.1.5 ID=mRNA_P-wetherbeei_contig13862.1.5|Name=mRNA_P-wetherbeei_contig13862.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig13862:975..1718+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGAACAAGAGCGAACCGACCGCTGAAAGGCCGGAGGCGGTTGTGAT CAAGAAATACGCAAACCGCCGCCTGTACAACACTGATACCAGCACCTATG TCACCCTTGAGGACCTTGGTGCGATGGTCCGCGCCGACCGAGACTTCGTC GTATTCGACGCCAAGACCGGCGATGACCTTACGCACACCGTGCTGACCCA GATTATCGTCGAGCAGGAAGGCAAGGCGGGCGGCCAGAACCTGCTGCCGG TTCCCTTCCTTCGCCAGTTGATACGATTCTACGACGATGCGATCGGCAAG ATGGTGCCGAGCTATCTGCAGTTCAGTCTCGAAAGCCTGGTGCATGAGCA GGTTCGCCTGCGCGAGCAGTTCGCCCCCCTGTTCCAGCAGAACCCATTCG GTGCGGCAGCCTTCGAAGCCCTCCAGGCCCAGACGCGCAAGAACGTCGCT ATGTTCGAGCAGGCCCTGTCGGTATGGGCCCCGTTCGCAGCGAGCAAGGC CGGCGCGGGAAATTTCCCGGGCTTCCCGCCGGGTATGGGTATGCCGGGTA TGCCTATGGGGATGCCCGGCATGGGTACCCCCGATACGGGCGCTGCTACG GCCGATGGCGGATCGGCAGCCCCTTCTTCGGAAGCGTCTGCCGAGGCCAA GCCTGGCGGCGCAGCGGATGAACTTGCTGAGCTGAAGGCCGAGTTCGCCA AGATGCAGGCCCGCATTGAGAAACTGTCCAAGACGCGAAGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13862:975..1718+

>mRNA_P-wetherbeei_contig13862.1.5 ID=mRNA_P-wetherbeei_contig13862.1.5|Name=mRNA_P-wetherbeei_contig13862.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig13862:975..1718+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGAACAAGAGCGAACCGACCGCTGAAAGGCCGGAGGCGGTTGTGAT
CAAGAAATACGCAAACCGCCGCCTGTACAACACTGATACCAGCACCTATG
TCACCCTTGAGGACCTTGGTGCGATGGTCCGCGCCGACCGAGACTTCGTC
GTATTCGACGCCAAGACCGGCGATGACCTTACGCACACCGTGCTGACCCA
GATTATCGTCGAGCAGGAAGGCAAGGCGGGCGGCCAGAACCTGCTGCCGG
TTCCCTTCCTTCGCCAGTTGATACGATTCTACGACGATGCGATCGGCAAG
ATGGTGCCGAGCTATCTGCAGTTCAGTCTCGAAAGCCTGGTGCATGAGCA
GGTTCGCCTGCGCGAGCAGTTCGCCCCCCTGTTCCAGCAGAACCCATTCG
GTGCGGCAGCCTTCGAAGCCCTCCAGGCCCAGACGCGCAAGAACGTCGCT
ATGTTCGAGCAGGCCCTGTCGGTATGGGCCCCGTTCGCAGCGAGCAAGGC
CGGCGCGGGAAATTTCCCGGGCTTCCCGCCGGGTATGGGTATGCCGGCCC
CTTCTTCGGAAGCGTCTGCCGAGGCCAAGCCTGGCGGCGCAGCGGATGAA
CTTGCTGAGCTGAAGGCCGAGTTCGCCAAGATGCAGGCCCGCATTGAGAA
ACTGTCCAAGACGCGAAGCTGA
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