mRNA_P-wetherbeei_contig13848.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13848.2.1
Unique NamemRNA_P-wetherbeei_contig13848.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13848.2.1 vs. uniprot
Match: A0A520NXC0_9PROT (Sulfurtransferase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NXC0_9PROT)

HSP 1 Score: 202 bits (515), Expect = 1.060e-60
Identity = 110/204 (53.92%), Postives = 137/204 (67.16%), Query Frame = 1
Query:    7 VNDARSKTLIAVDELARLLDARKPVVLLDVIDEQGAAPEDRPKIPGALSVHLATDFSGQPTPASGRRPLPDGLALQSKARAWGIGSDSLVVVYDNSGGAQASRAWWTLRWAGVTNVRVLDGGHGAWTAANRPSSNHVATQAASAGDVVLTTGCMPTIDAEAAADLAKQSQLLDARPRTAYVGDPGKAGTGHIPGAIHALAGDNI 618
            + D RS  LI VDELA  +     +VLLD+ D+   AP +RP +PGA++V LA+D SG  +   GRRPLPD  ALQ   + +GI +DS VVVYDN+ GAQA R+WWTLRWAG  NVR+LDGG  AW AA   ++   A +A   G +V+T G MP IDA+ AAD+A+   LLDAR + AY GDPGK  TGHIPGAI A A D +
Sbjct:    1 MTDTRSSVLITVDELADRIAGEPELVLLDISDDLETAPLERPVVPGAIAVSLASDISGPASKDGGRRPLPDPGALQKTLQGFGIDADSSVVVYDNASGAQAGRSWWTLRWAGHENVRLLDGGLAAWIAAGHNTAPDPA-RAPGGGSIVVTPGGMPVIDADDAADVARNGALLDARGKAAYEGDPGKTATGHIPGAICAGAKDAL 203          
BLAST of mRNA_P-wetherbeei_contig13848.2.1 vs. uniprot
Match: A0A2D7FLU4_9PROT (Sulfurtransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FLU4_9PROT)

HSP 1 Score: 191 bits (486), Expect = 2.410e-56
Identity = 103/204 (50.49%), Postives = 129/204 (63.24%), Query Frame = 1
Query:    7 VNDARSKTLIAVDELARLLDARKPVVLLDVIDEQGAAPEDRPKIPGALSVHLATDFSGQPTPASGRRPLPDGLALQSKARAWGIGSDSLVVVYDNSGGAQASRAWWTLRWAGVTNVRVLDGGHGAWTAANRPSSNHVATQAASAGDVVLTTGCMPTIDAEAAADLAKQSQLLDARPRTAYVGDPGKAGTGHIPGAIHALAGDNI 618
            ++DARS  LI    LA    A   +VLLD+ D+   AP +R  IPGA++V LA+D SG  TP  GRRPLPD   LQ   R WGI  D+ V+VYD++ G QA RAWWTLRWAG  N R+LDGG  AW A    + +  A   +S G++ +  G MP I+A+ AA +A+   LLDAR +TAY GDP K  TGHIPGAI A A D +
Sbjct:    1 MSDARSSVLITAKNLAAATFANASLVLLDISDDLETAPLERCVIPGAIAVSLASDMSGAATPEDGRRPLPDPATLQRTLRRWGINEDTQVIVYDDASGGQAGRAWWTLRWAGHVNTRLLDGGLAAWRALGNETDDKPA-HPSSGGNITVNPGSMPVIEADDAAKIARNGALLDARGKTAYEGDPNKPTTGHIPGAICAGAKDAL 203          
BLAST of mRNA_P-wetherbeei_contig13848.2.1 vs. uniprot
Match: A0A2D8G242_9PROT (Sulfurtransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G242_9PROT)

HSP 1 Score: 183 bits (465), Expect = 3.400e-53
Identity = 104/200 (52.00%), Postives = 128/200 (64.00%), Query Frame = 1
Query:   13 DARSKTLIAVDELARLLDARKPVVLLDVIDEQGAAPEDRPKIPGALSVHLATDFSGQPTPASGRRPLPDGLALQSKARAWGIGSDSLVVVYDNSGGAQASRAWWTLRWAGVTNVRVLDGGHGAWTAANRPSSNHVATQAASAGDVVLTTGCMPTIDAEAAADLAKQSQLLDARPRTAYVGDPGKAGTGHIPGAIHALAGD 612
            D RS  LI+V  L  LL A   +++LD+ D+    P  R  IPGAL+  LA+DFSG  T   GRRPLP   ALQ+  R +GI   S VVVYDN+GGAQA RAWWTLRWAG  NVR+LDGG  AW  A + SS+  A  +A  GD+ ++ G MP  DA  +A++A++  LLDAR R  Y GDP    TGHIPGA+ A A D
Sbjct:    3 DTRSDILISVAALTELLSASXDLIVLDISDDLETTPLXRNVIPGALAASLASDFSGPATKDGGRRPLPSSEALQNTLRGFGINRGSTVVVYDNAGGAQAGRAWWTLRWAGHQNVRLLDGGLAAWCDAGQGSSSEPACASAK-GDIEVSPGGMPVXDAXXSAEIARRGILLDARGRKGYEGDPEIPTTGHIPGAMCAGAKD 201          
BLAST of mRNA_P-wetherbeei_contig13848.2.1 vs. uniprot
Match: A0A2E9E8H5_9GAMM (Sulfurtransferase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9E8H5_9GAMM)

HSP 1 Score: 180 bits (457), Expect = 6.020e-52
Identity = 96/202 (47.52%), Postives = 131/202 (64.85%), Query Frame = 1
Query:    1 VPVNDARSKTLIAVDELARLLDARKPVVLLDVIDEQGAAPEDRPKIPGALSVHLATDFSGQPTPASGRRPLPDGLALQSKARAWGIGSDSLVVVYDNSGGAQASRAWWTLRWAGVTNVRVLDGGHGAWTAANRPSSNHVATQAASAGDVVLTTGCMPTIDAEAAADLAKQSQLLDARPRTAYVGDPGKAGTGHIPGAIHALA 606
            V +  +RS+ LI+VD L   + + + V+LLDV D+  A P +R  IPGA+++ LA D SG  +   G+RPLP    L+   R WGI +DSLV+VYD + GAQASRAWWT RWAG   VR+LDGG  AW +    +S   +  + S G+ +++ G MPTI AE A ++A+   LLDAR ++A+ G+ GK  TGHIPGAI A A
Sbjct:    3 VQIKSSRSEVLISVDTLREKMSSSEKVILLDVSDDLEAKPLNRDVIPGAIAISLAADISGPASKEGGKRPLPSPGVLERTIRQWGIDADSLVIVYDATSGAQASRAWWTFRWAGHERVRLLDGGFNAWKSGGYATSKKPSLCSQS-GNFIISAGGMPTIGAEEAQEIARTGTLLDARGKSAFEGEAGKPDTGHIPGAISAPA 203          
BLAST of mRNA_P-wetherbeei_contig13848.2.1 vs. uniprot
Match: A0A211ZV55_9PROT (Uncharacterized protein n=1 Tax=Inquilinus limosus TaxID=171674 RepID=A0A211ZV55_9PROT)

HSP 1 Score: 166 bits (420), Expect = 1.320e-46
Identity = 95/203 (46.80%), Postives = 123/203 (60.59%), Query Frame = 1
Query:   31 LIAVDELARLLDARKPVVLLDV---IDEQGAAPE-DRPKIPGALSVHLATDFSGQPTPASGRRPLPDGLALQSKARAWGIGSDSLVVVYDNSGGAQASRAWWTLRWAGVTNVRVLDGGHGAWTAANRPSSNHVATQAASAGDVVLTTGCMPTIDAEAAADLAKQSQLLDARPRTAYVGDPGKAGTGHIPGAIHALAGDNIADG 627
            LI+  EL RL D   P+V+LD    +  Q   P  + P IPGAL V +AT+ +G PT  SGRRPLP    LQ  AR WGI  DS+VVVYD +   QA+R WW LRWAGV +VR+L+GG GAWT   RP+   V  +  + G V L+ G +P +DA  AA +A Q  LLDAR R AY+        GHIPGA++  + +++  G
Sbjct:    4 LISAAELGRLQDTGAPLVILDARFDVARQDIRPAVETPHIPGALYVDVATELAGDPTALSGRRPLPQIRDLQRDARRWGIDPDSIVVVYDENRNIQAARVWWVLRWAGVKDVRLLNGGFGAWTGEGRPTM--VTVKVPATGTVTLSAGHLPVVDAAGAAAVAGQGILLDARARDAYL-------AGHIPGAVNVPSAESLGTG 197          
BLAST of mRNA_P-wetherbeei_contig13848.2.1 vs. uniprot
Match: UPI001EF32773 (sulfurtransferase n=1 Tax=Actinoplanes philippinensis TaxID=35752 RepID=UPI001EF32773)

HSP 1 Score: 162 bits (410), Expect = 4.960e-45
Identity = 101/205 (49.27%), Postives = 118/205 (57.56%), Query Frame = 1
Query:   31 LIAVDELARLLDARKPVVLLDVI----DEQGAAPEDRPKIPGALSVHLATDFSGQPTPASGRRPLPDGLALQSKARAWGIGSDSLVVVYDNSGGAQASRAWWTLRWAGVTNVRVLDGGHGAWTAANRPSSNHVATQAASAGDVVLTTGCMPTIDAEAAADLAKQSQLLDARPRTAYVGD--PGKAGTGHIPGAIHALAGDNIADG 627
            L  V+E+ R      P VLLDV     D  GA       +PGA+ V L T+ +G   P +GR PLP   ALQS AR WGI +DS VVVYDNSGG  A+RAWW LRWAGVT VR+LDGG  AW A+    +   AT     GDVVLT G +PT+ A+ AA L     LLDAR    Y G+  P     GHIPGAI    G N+ DG
Sbjct:    2 LAGVEEVYRAAVEPDPPVLLDVRWALGDPNGAEHYRAGHLPGAVYVDLDTELAGPHQPGAGRHPLPSIAALQSAARRWGINADSRVVVYDNSGGLAAARAWWLLRWAGVTGVRILDGGLAAWRASGYAEATGSATPRRP-GDVVLTAGHLPTLTADEAAALPGAGTLLDARAGERYRGEIEPIDPRAGHIPGAISRPTGGNLQDG 205          
BLAST of mRNA_P-wetherbeei_contig13848.2.1 vs. uniprot
Match: UPI001C868DB4 (sulfurtransferase n=1 Tax=Actinoplanes lutulentus TaxID=1287878 RepID=UPI001C868DB4)

HSP 1 Score: 162 bits (409), Expect = 6.810e-45
Identity = 99/205 (48.29%), Postives = 120/205 (58.54%), Query Frame = 1
Query:   31 LIAVDELARLLDARKPVVLLDVI----DEQGAAPEDRPKIPGALSVHLATDFSGQPTPASGRRPLPDGLALQSKARAWGIGSDSLVVVYDNSGGAQASRAWWTLRWAGVTNVRVLDGGHGAWTAANRPSSNHVATQAASAGDVVLTTGCMPTIDAEAAADLAKQSQLLDARPRTAYVGD--PGKAGTGHIPGAIHALAGDNIADG 627
            ++ VDE+ R        VLLDV     D  GA       +PGA+ V L T+ +G     +GR PLP   ALQS AR WGI +DS VVVYDNSGG  A RAWW LRWAGV++VR+LDGG GAW AA    +   A+    AGDVVLT G +PT+ A+ AA L     LLDAR    Y G+  P     GHIPGAI    G+N+ +G
Sbjct:    1 MVGVDEVRRAAAEPNSPVLLDVRWALGDPNGAEHYKAGHLPGAVYVDLDTELAGPHESGAGRHPLPSIAALQSVARRWGINTDSSVVVYDNSGGLAAGRAWWLLRWAGVSDVRILDGGLGAWRAAGYTEATGSASPRR-AGDVVLTPGHLPTLTADEAAALPSTGTLLDARAGERYRGEVEPIDPRAGHIPGAISKPTGENLQEG 204          
BLAST of mRNA_P-wetherbeei_contig13848.2.1 vs. uniprot
Match: A0A1I3UCW2_9CELL (Thiosulfate sulfurtransferase n=1 Tax=Cellulomonas sp. KH9 TaxID=1855324 RepID=A0A1I3UCW2_9CELL)

HSP 1 Score: 160 bits (405), Expect = 3.810e-44
Identity = 96/209 (45.93%), Postives = 121/209 (57.89%), Query Frame = 1
Query:   10 NDARSKTLIAVDELARLLDARKPVVLLDVI----DEQGAAPEDRPKIPGALSVHLATDFSGQPTPASGRRPLPDGLALQSKARAWGIGSDSLVVVYDNSGGAQASRAWWTLRWAGVTNVRVLDGGHGAWTAANRPSSNHVATQAASAGDVVLTTGCMPTIDAEAAADLAKQSQLLDARPRTAYVG--DPGKAGTGHIPGAIHALAGDNI 618
            +D R + L+ VDELARLL   +P VLLDV      + G        +PGA+ V L T+ +   +PA+GR PLPD   L+  AR WG+   + VVVYD +GGA A+RAWW LRWAGV +VR+LDGG  AW AA         T     GDVVL  G +PT+DA+ AA LA    LLDAR    Y G  +P     GH+PGA+ A    N+
Sbjct:    6 DDVRRRVLVDVDELARLLADDEPPVLLDVRWALGRDDGHERYLAAHVPGAVYVDLDTELAAPASPAAGRHPLPDVADLERAARRWGVREGAAVVVYDETGGAAAARAWWLLRWAGVRDVRLLDGGLPAWVAAGYGVEPGEVTP--EPGDVVLLPGALPTVDADGAAALAADGVLLDARAAERYAGRVEPVDPRAGHVPGAVSAPTAANL 212          
BLAST of mRNA_P-wetherbeei_contig13848.2.1 vs. uniprot
Match: UPI00194E8BA0 (sulfurtransferase n=1 Tax=Microvirga pudoricolor TaxID=2778729 RepID=UPI00194E8BA0)

HSP 1 Score: 160 bits (405), Expect = 4.120e-44
Identity = 101/208 (48.56%), Postives = 128/208 (61.54%), Query Frame = 1
Query:   19 RSKTLIAVDELARLLDARKPVVLLDVIDEQGAAPEDRPK-----IPGALSVHLATDFSGQPTPASGRRPLPDGLALQSKARAWGIGSDSLVVVYDNSGGAQASRAWWTLRWAGVTNVRVLDGGHGAWTAANRPSSNHVATQAASAGDVVLTTGCMPTIDAEAAADLAKQSQLLDARPRTAYVGDPGKAGT---GHIPGAIHALAGDNI 618
            R+  LI+  EL   +   K +VLLD I  +  +P+ RP      IPGA+ V L T+ +G     SGRRPLPD   LQ  AR WG+  DS VVVYD++ G QA+RAWW LRWAG+T+VR+LDGG  AW  A    +  V     + GDVVL  G +P +DA+AAA LA+ S LLDAR   AY+G P +AG    GHIPGAI A   +N+
Sbjct:   10 RTSVLISTTEL-EAVSKSKHLVLLD-IRFRPDSPDGRPAYLAGHIPGAVYVDLPTELAGASRGLSGRRPLPDISDLQRDARQWGVNPDSTVVVYDDNRGLQAARAWWVLRWAGLTDVRLLDGGLAAWKEAGGIVTRDVPQP--TPGDVVLAGGHLPVLDADAAASLARSSILLDARGAEAYLGRPREAGKEPEGHIPGAISAPTTENL 213          
BLAST of mRNA_P-wetherbeei_contig13848.2.1 vs. uniprot
Match: A0A511FCT3_9CELL (Thiosulfate sulfurtransferase n=2 Tax=Cellulomonas hominis TaxID=156981 RepID=A0A511FCT3_9CELL)

HSP 1 Score: 160 bits (404), Expect = 4.220e-44
Identity = 96/207 (46.38%), Postives = 122/207 (58.94%), Query Frame = 1
Query:   31 LIAVDELARLLDARKPVVLLDVIDEQGAAPEDRP----KIPGALSVHLATDFSGQPTPASGRRPLPDGLALQSKARAWGIGSDSLVVVYDNSGGAQASRAWWTLRWAGVTNVRVLDGGHGAWTAANRPSSNHVATQAASAGDVVLTTGCMPTIDAEAAADLAKQSQLLDARPRTAYVGD--PGKAGTGHIPGAIHALAGDNI-ADGK 630
            +++  +LAR LD  +P  LLDV    G  P   P     +PGA+ V L  D +  P+ A+GR PLPD   LQ+ AR WG+ +   VVVYD++GG  ASRAWW LRW GV +VR+LDGG GAWTAA        A     AGDV LT G +P +DA+ AA  A+   LLDAR    + G+  P     GHIPGA+ A   DN+ ADG+
Sbjct:    5 IVSAADLARELDGPRPPRLLDVRWSLGGPPGIEPFREGHLPGAVYVDLDADLAAAPSAAAGRHPLPDAADLQAAARRWGLRAGEPVVVYDDTGGMSASRAWWLLRWGGVDDVRILDGGLGAWTAAGGALETGEAP--VPAGDVTLTGGHLPVLDADGAARWAQDGVLLDARAAERFRGEVEPVDPRAGHIPGAVSAPTSDNLGADGR 209          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13848.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A520NXC0_9PROT1.060e-6053.92Sulfurtransferase n=2 Tax=Rhodospirillaceae bacter... [more]
A0A2D7FLU4_9PROT2.410e-5650.49Sulfurtransferase n=1 Tax=Rhodospirillaceae bacter... [more]
A0A2D8G242_9PROT3.400e-5352.00Sulfurtransferase n=1 Tax=Alphaproteobacteria bact... [more]
A0A2E9E8H5_9GAMM6.020e-5247.52Sulfurtransferase n=1 Tax=Gammaproteobacteria bact... [more]
A0A211ZV55_9PROT1.320e-4646.80Uncharacterized protein n=1 Tax=Inquilinus limosus... [more]
UPI001EF327734.960e-4549.27sulfurtransferase n=1 Tax=Actinoplanes philippinen... [more]
UPI001C868DB46.810e-4548.29sulfurtransferase n=1 Tax=Actinoplanes lutulentus ... [more]
A0A1I3UCW2_9CELL3.810e-4445.93Thiosulfate sulfurtransferase n=1 Tax=Cellulomonas... [more]
UPI00194E8BA04.120e-4448.56sulfurtransferase n=1 Tax=Microvirga pudoricolor T... [more]
A0A511FCT3_9CELL4.220e-4446.38Thiosulfate sulfurtransferase n=2 Tax=Cellulomonas... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13848contigP-wetherbeei_contig13848:578..1422 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1502724.FF80_01125
PFAMsRhodanese
Model size845
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00214
KEGG koko:K01011
KEGG ReactionR01931,R03105,R03106
KEGG Pathwayko00270,ko00920,ko01100,ko01120,ko04122,map00270,map00920,map01100,map01120,map04122
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.05e-07
EggNOG OGsCOG2897@1|root,COG2897@2|Bacteria,1MW4B@1224|Proteobacteria,2UE76@28211|Alphaproteobacteria
EC2.8.1.1,2.8.1.2
DescriptionRhodanese Homology Domain
Cds size285
COG categoryP
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185999.1650121-UTR-P-wetherbeei_contig13848:577..10421683185999.1650121-UTR-P-wetherbeei_contig13848:577..1042Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13848 578..1042 +
1683185999.186615-UTR-P-wetherbeei_contig13848:1327..14221683185999.186615-UTR-P-wetherbeei_contig13848:1327..1422Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13848 1328..1422 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185999.178155-CDS-P-wetherbeei_contig13848:1042..13271683185999.178155-CDS-P-wetherbeei_contig13848:1042..1327Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13848 1043..1327 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13848.2.1prot_P-wetherbeei_contig13848.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13848 1043..1327 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13848.2.1

>prot_P-wetherbeei_contig13848.2.1 ID=prot_P-wetherbeei_contig13848.2.1|Name=mRNA_P-wetherbeei_contig13848.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp
MPTIDAEAAADLAKQSQLLDARPRTAYVGDPGKAGTGHIPGAIHALAGDN
IADGKNSNRPMICTPAFLVWERMARQELESIAAAAMRRPMRSQP*
back to top

mRNA from alignment at P-wetherbeei_contig13848:578..1422+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13848.2.1 ID=mRNA_P-wetherbeei_contig13848.2.1|Name=mRNA_P-wetherbeei_contig13848.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=845bp|location=Sequence derived from alignment at P-wetherbeei_contig13848:578..1422+ (Phaeothamnion wetherbeei SAG_119_79)
GTTCCAGTGAACGACGCGCGCTCGAAAACGCTGATCGCAGTCGACGAACT CGCTCGGCTGCTGGACGCCCGGAAGCCCGTCGTGCTACTGGACGTGATCG ATGAGCAGGGCGCGGCGCCGGAAGACAGGCCCAAAATACCGGGTGCTTTG TCCGTCCATCTGGCGACGGATTTTTCCGGCCAGCCCACACCGGCGTCCGG CCGGCGGCCCTTGCCGGATGGACTCGCGTTGCAATCCAAGGCGCGCGCCT GGGGGATCGGCAGCGACAGTCTCGTCGTGGTGTACGACAATTCCGGCGGC GCGCAGGCGTCCCGCGCCTGGTGGACCCTGCGCTGGGCGGGGGTGACCAA TGTGCGTGTACTGGATGGCGGGCATGGCGCGTGGACCGCGGCCAACCGCC CCTCGTCAAATCATGTCGCGACGCAGGCGGCATCCGCCGGCGATGTCGTT CTGACGACAGGGTGCATGCCGACGATCGACGCCGAAGCGGCCGCGGATCT CGCGAAGCAATCCCAATTGCTCGATGCACGGCCGCGCACGGCTTATGTCG GCGATCCCGGCAAAGCAGGCACCGGCCATATTCCCGGAGCCATTCATGCA CTGGCCGGCGACAACATCGCCGATGGAAAAAATTCAAACCGGCCGATGAT CTGCACGCCTGCTTTTCTCGTCTGGGAGCGGATGGCTCGACAAGAATTGG AGTCTATTGCGGCAGCGGCAATGCGGCGGCCCATGCGATCGCAGCCATGA GCGCCGTTGGCCTGGAGGCCGCGCTGTATGTCGGGTCGTGGTCTGCCTGG AGCGCCGACCCGTCGCGCCCCGCGGCGACGGGCCACGAGCCCGGG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig13848:578..1422+

>mRNA_P-wetherbeei_contig13848.2.1 ID=mRNA_P-wetherbeei_contig13848.2.1|Name=mRNA_P-wetherbeei_contig13848.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig13848:578..1422+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGACGATCGACGCCGAAGCGGCCGCGGATCTCGCGAAGCAATCCCA
ATTGCTCGATGCACGGCCGCGCACGGCTTATGTCGGCGATCCCGGCAAAG
CAGGCACCGGCCATATTCCCGGAGCCATTCATGCACTGGCCGGCGACAAC
ATCGCCGATGGAAAAAATTCAAACCGGCCGATGATCTGCACGCCTGCTTT
TCTCGTCTGGGAGCGGATGGCTCGACAAGAATTGGAGTCTATTGCGGCAG
CGGCAATGCGGCGGCCCATGCGATCGCAGCCATGA
back to top