mRNA_P-wetherbeei_contig1378.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1378.3.1 vs. uniprot
Match: A0A6V1NVD6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NVD6_HETAK) HSP 1 Score: 159 bits (401), Expect = 2.850e-45 Identity = 84/156 (53.85%), Postives = 104/156 (66.67%), Query Frame = 1
Query: 22 DALSSLLGAWTMVVLGVRVLTFGPDPRYAAGFPTDVAHPAGCTRVAPTA---PCRSRNPPPVFKGKSVERVQGLVREWIKAQPRATILKDEPGYMHAQVLSLLMGFPDNLGVKVVEKGGGTDKGVEVWVQGELRVGEGDLGVNARRVKALLDHLEK 480
+A+ + L W + +LGVR+ T PDPRYA FP DVA P GCTRVA P P V G SV++VQ ++ WI QPRATIL+++ GY+HAQVLS LMGFPDNLGV+V G EVW QGELRVG+GDLGVN RVK LL+ +++
Sbjct: 121 EAVGTPLSVWVVALLGVRLATLAPDPRYAGAFPADVAAPIGCTRVAGDFGRWPGGGNLRPAVVPGLSVDQVQQRIKGWILEQPRATILEEKEGYIHAQVLSNLMGFPDNLGVRVFRNAAGR---TEVWAQGELRVGQGDLGVNYARVKKLLEFIDE 273
BLAST of mRNA_P-wetherbeei_contig1378.3.1 vs. uniprot
Match: A0A835ZGQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGQ5_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.680e-37 Identity = 83/170 (48.82%), Postives = 98/170 (57.65%), Query Frame = 1
Query: 52 TMVVLGVRVLTFGPDPRYAAGFPTD----------------------------VAHPAGCTRVAPTAPCRSRNPPPVFKGKSVERVQGLVREWIKAQPRATILKDEPGYMHAQVLSLLMGFPDNLGVKVVEKGGGTDKGVEVWVQGELRVGEGDLGVNARRVKALLDHLE 477
T+V+L VRV+T PD RY FP +AHP+GCTRVAPT S P FK E VQ + REW+ QPR I +DEPGY+HAQ LS L GFPDNLG++ E GG G +VW QGELRVGEGDLGVN +RVKALL +L+
Sbjct: 116 TIVMLLVRVVTIRPDARYVH-FPASMRRCASFXXXXXXXXXXXXXXXXXXXXXIAHPSGCTRVAPTKTNVSDLGMPKFKSSPAE-VQEVAREWLALQPRTKIFRDEPGYVHAQALSFLFGFPDNLGIRFEETPGG---GTQVWAQGELRVGEGDLGVNYKRVKALLLYLQ 280
BLAST of mRNA_P-wetherbeei_contig1378.3.1 vs. uniprot
Match: A0A0G4G6M2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G6M2_9ALVE) HSP 1 Score: 117 bits (294), Expect = 4.640e-30 Identity = 69/160 (43.12%), Postives = 90/160 (56.25%), Query Frame = 1
Query: 1 AGLTPAADALSSLLGAWTMVVLGVRVLTFGPDPRYAAGFPTDVAHPAGCTRVAPTAPCRSRNPPPVFKGKSVERVQGLVREWIKAQPRATILKDEPGYMHAQVLSLLMGFPDNLGVKVVEKGGGTDKGVEVWVQGELRVGEGDLGVNARRVKALLDHLEK 480
AGL P ++++LG W +L VR+ + P + FP V HP G TRVAP + PPV+ V +Q +EWI+ QPR I+ D+ GY++A L+ LMGF DN VK + GG + VWVQ EL +GEGDLGVN RV A L L K
Sbjct: 56 AGLVPL---VTNVLGVWVFSLLVVRLTSRSPTKTWVEDFPQTVDHPRGATRVAPDFSSPKKLEPPVYDAP-VATLQKAAKEWIEQQPRTAIVTDKEGYIYAYFLTNLMGFRDNFAVKFESQAGGKTR---VWVQSELILGEGDLGVNYNRVNAFLSALGK 208
BLAST of mRNA_P-wetherbeei_contig1378.3.1 vs. uniprot
Match: A0A383VMS0_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VMS0_TETOB) HSP 1 Score: 69.7 bits (169), Expect = 2.980e-11 Identity = 59/173 (34.10%), Postives = 89/173 (51.45%), Query Frame = 1
Query: 16 AADALSSLLGAWTMVVLGVRVLTFGPDPRYAAGFPTDVAHPA--GCTRVAPTAPCRSRNPPPVFKGKSVERVQGLVREWIKAQPRATILK--------------DEPGYMHAQVLSLLMGFPDNLGVKVVEKGGGTDKG-VEVWVQGELRVGEGDLGVNARRVKALLDHLEKA 483
AA +LS L G W ++++ VR + PD R++ GFP + GC+RVA P R+ PV ++ V +WIK QPR T+L + +HA+ +SLL GF D++ V++ D G V + QG+LRVG GD+ VN +R AL+ ++ A
Sbjct: 84 AAHSLSGL-GVWLLLLVLVRAAS--PDVRFS-GFPDACPYTKQLGCSRVAADNPHRNAGWEPVPLPTTLPAAASAVLQWIKQQPRTTVLAVHGPPSSAGAAAAVSQETAIHARFVSLLWGFADDVFVRLSCN---ADSGAVLLEAQGQLRVGVGDMEVNVQRNAALMAAMKAA 249
BLAST of mRNA_P-wetherbeei_contig1378.3.1 vs. uniprot
Match: A0A7J7PIX1_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PIX1_9CHLO) HSP 1 Score: 67.0 bits (162), Expect = 2.350e-10 Identity = 56/167 (33.53%), Postives = 82/167 (49.10%), Query Frame = 1
Query: 40 LGAWTMVVLGVRVLTFGPDPRYAAGFPT--DVAHPAGCTRVAPTAPCRSRNPPPVFKGKSVERVQGLVREWIKAQPRATILKDEPG------------------YMHAQVLSLLMGFPDNLGVKVVEKGGGTDKG-VEVWVQGELRVGEGDLGVNARRVKALLDHLE 477
+ W ++++ VRV + PD + + GFP + GC+RVA P R+ PV ++ V EWI+ QPRAT+L G HA+ +SLL GF D++ V++ D G V + QG+LRVG GD+ VN +R ALL +E
Sbjct: 67 MAVWLLLLVLVRVAS--PDVQ-SKGFPDACPFSKQLGCSRVARDKPHRAAGLRPVEMPTTLPAATSAVLEWIRQQPRATVLTVHRGPSGTDSAASGGQEAAQQAVAHARFVSLLWGFADDVFVRLSCD---ADNGAVLLEAQGQLRVGVGDMEVNVKRNAALLAAME 227
BLAST of mRNA_P-wetherbeei_contig1378.3.1 vs. uniprot
Match: A0A7Y3C2X7_9BACT (DUF1499 domain-containing protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y3C2X7_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 3.830e-8 Identity = 46/140 (32.86%), Postives = 68/140 (48.57%), Query Frame = 1
Query: 64 LGVRVLTFGPDPRYAAGFPTDVAHPAGCTRVAPTAPCRSRNPPPVFKGKSVERVQGLVREWIKAQPRATILKDEPGYMHAQVLSLLMGFPDNLGVKVVEKGGGTDKGVEVWVQGELRVGEGDLGVNARRVKALLDHLEKA 483
LG R T P P T + HP G + T V + + R++G+V ++ PR +++ E GY+ A+ SL+ F D+L + V G E+ V+ RVGEGDLG NARRV+ L + L +A
Sbjct: 24 LGPRDGTLAPCPGSPNCVHTGMRHPDGTAGLYLTGN--------VTGAELMTRLEGVV----ESMPRTAVVESESGYLRAEATSLVFRFVDDLELLVGVDG-------ELIVRSASRVGEGDLGANARRVENLRERLTEA 144
BLAST of mRNA_P-wetherbeei_contig1378.3.1 vs. uniprot
Match: D7G2M0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2M0_ECTSI) HSP 1 Score: 57.4 bits (137), Expect = 1.430e-7 Identity = 35/71 (49.30%), Postives = 41/71 (57.75%), Query Frame = 1
Query: 16 AADALSSLLGAWTMVVLGVRVLTFGPDPRYAAGFPTDVAHPAGCTRVAPTAPCRSRNPPPVFKGKSVERVQ 228
AA S+L T+ +LGVR T GPD RY FPT +AHP GCTRVA T + P FK SV+ VQ
Sbjct: 53 AAGVAGSVLTFLTVTMLGVRTYTAGPDTRYIDSFPTGIAHPEGCTRVAETGGNKGIAVP-TFKA-SVDEVQ 121
BLAST of mRNA_P-wetherbeei_contig1378.3.1 vs. uniprot
Match: A0A2E9GNK7_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E9GNK7_9DELT) HSP 1 Score: 57.0 bits (136), Expect = 2.350e-7 Identity = 33/87 (37.93%), Postives = 47/87 (54.02%), Query Frame = 1
Query: 220 RVQGLVREWIKAQPRATILKDEPGYMHAQVLSLLMGFPDNLGVKVVEKGGGTDKGVEVWVQGELRVGEGDLGVNARRVKALLDHLEK 480
R R+ + PR ++ DEPGY+HA+ S LMGF D+L + + + V+ R+G GDLGVN RRV+ L +L K
Sbjct: 53 RAWAAARQAVLDLPRTELVVDEPGYLHAECRSALMGFVDDLELHL------RPDESRIEVRSASRLGYGDLGVNRRRVEGLRTNLRK 133
BLAST of mRNA_P-wetherbeei_contig1378.3.1 vs. uniprot
Match: A0A2P2DVN7_9LEPT (Uncharacterized protein n=1 Tax=Leptospira ryugenii TaxID=1917863 RepID=A0A2P2DVN7_9LEPT) HSP 1 Score: 56.2 bits (134), Expect = 5.330e-7 Identity = 34/93 (36.56%), Postives = 56/93 (60.22%), Query Frame = 1
Query: 199 FKGKSVERVQGLVREWIKAQPRATILKDEPGYMHAQVLSLLMGFPDNLGVKVVEKGGGTDKGVEVWVQGELRVGEGDLGVNARRVKALLDHLE 477
FKG + + ++ L ++ I++ PRA I+ E Y++A+ SLL F D++ V EK ++ + R+G+GDLGVN +R++ALL LE
Sbjct: 60 FKGDAKQAIENLKKK-IESYPRAEIITLESNYIYAEFTSLLFRFVDDVEFYVDEKN------KKLHFRSASRLGKGDLGVNRKRIEALLKDLE 145
BLAST of mRNA_P-wetherbeei_contig1378.3.1 vs. uniprot
Match: Q7V159_PROMP (Uncharacterized protein n=2 Tax=Prochlorococcus marinus TaxID=1219 RepID=Q7V159_PROMP) HSP 1 Score: 53.1 bits (126), Expect = 5.770e-6 Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 211 SVERVQGLVREWIKAQPRATILKDEPGYMHAQVLSLLMGFPDNLGVKVVEKGGGTDKGVEVWVQGELRVGEGDLGVNARRVKALLDHL 474
S+E+ V+E I+ PR+ I++ + Y+HA+V S M + D+L V V + ++ V+ E RVGEGDLGVN +RV L L
Sbjct: 49 SIEQPFKEVKEIIENTPRSVIVELDGDYLHAEVTSKWMKYVDDLEVSFVPESR------KLLVRSESRVGEGDLGVNQKRVDLLKSKL 130 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1378.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1378.3.1 >prot_P-wetherbeei_contig1378.3.1 ID=prot_P-wetherbeei_contig1378.3.1|Name=mRNA_P-wetherbeei_contig1378.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=163bp AGLTPAADALSSLLGAWTMVVLGVRVLTFGPDPRYAAGFPTDVAHPAGCTback to top mRNA from alignment at P-wetherbeei_contig1378:3289..4438+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1378.3.1 ID=mRNA_P-wetherbeei_contig1378.3.1|Name=mRNA_P-wetherbeei_contig1378.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1150bp|location=Sequence derived from alignment at P-wetherbeei_contig1378:3289..4438+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1378:3289..4438+ >mRNA_P-wetherbeei_contig1378.3.1 ID=mRNA_P-wetherbeei_contig1378.3.1|Name=mRNA_P-wetherbeei_contig1378.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=489bp|location=Sequence derived from alignment at P-wetherbeei_contig1378:3289..4438+ (Phaeothamnion wetherbeei SAG_119_79)back to top |