mRNA_P-wetherbeei_contig13774.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13774.2.1 vs. uniprot
Match: A0A7C4XNB2_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XNB2_9HYPH) HSP 1 Score: 217 bits (552), Expect = 3.990e-62 Identity = 131/245 (53.47%), Postives = 165/245 (67.35%), Query Frame = 1
Query: 4 PISFVVCDAQCDPGEAAETLAQARKSAGGREVKGVLLIDSVTRPSLEQFRAAGFTSYLVRPVRPSALLARF------GVEPASVAFDERAEAPADAEAVASGEFEGRHVLLAEDNAVNALLARRMLEKAGCTVVHAEDGEAAVVEVSRAMEPGGQPFDLVLMDLHMPRLDGLSAAARIRAIAGGMGRSA--ELPPIVALTANAFAEDRERCLAGGLDDYLAKPFHRNELRDLLARWDRQRRRSAA 714
PI V+ DA+ DP EA LAQARK+A GR V+G++LID++ R +L FR+ GF SYLVRPVRP +L+A+ G PA + D R + ++ +AV E HVL+AEDN +NALLA+RM+EK G T + A DGE AV + +A+E PFDLVLMD+HMP+LDGL AA +R + G RS LPPIVA+TANAF EDR RCL GLDDYLAKPF R EL L+ R R +RR+ A
Sbjct: 553 PIDLVIVDAEADPDEARRLLAQARKAAPGRSVRGIVLIDALARANLRTFRSIGFDSYLVRPVRPRSLVAQIALHDGQGGSPAG-SEDMRGASQSEPQAV----LECCHVLIAEDNPINALLAQRMVEKIGGTSMVAADGEEAVALMQQALEGRIPPFDLVLMDVHMPKLDGLEAAQAMRRLTAGESRSTGRALPPIVAVTANAFPEDRRRCLEAGLDDYLAKPFDRGELEALITR--RLKRRTEA 790
BLAST of mRNA_P-wetherbeei_contig13774.2.1 vs. uniprot
Match: A0A3N5P2T3_9HYPH (Histidine kinase (Fragment) n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5P2T3_9HYPH) HSP 1 Score: 198 bits (504), Expect = 3.510e-56 Identity = 113/231 (48.92%), Postives = 148/231 (64.07%), Query Frame = 1
Query: 4 PISFVVCDAQCDPGEAAETLAQARKSAGGREVKGVLLIDSVTRPSLEQFRAAGFTSYLVRPVRPSALLARFGVEPASVAFDERAEAPADAEAVASGEF--EGRHVLLAEDNAVNALLARRMLEKAGCTVVHAEDGEAAVVEVSRAMEPGGQPFDLVLMDLHMPRLDGLSAAARIRAI-AGGMGRSAELPPIVALTANAFAEDRERCLAGGLDDYLAKPFHRNELRDLLARW 687
P + V+ D+ C +AA L+ AR+ AG R V+G++++D+ + S +FRAAGF +YLVRPVRP ++L G ER+E+ A+A A + VLL EDNA+NALLARRMLEK GC +G AV + R + G P+DL+LMD+HMP LDGL A IR++ A R+ + PPIVALTANAF +DR RCLA G+DDYLAKPF R +L LL RW
Sbjct: 398 PFTTVLVDSHCGSAKAAGILSCARQLAGDRSVQGIVVLDTAAKASFAEFRAAGFAAYLVRPVRPRSVLTHVGA-----GATERSESAGGAKAQAGPRWLAAAPRVLLVEDNAINALLARRMLEKVGCEAKLCGNGREAVETMRRVLAGGDAPYDLILMDVHMPVLDGLEATRLIRSLFAAAADRTLQSPPIVALTANAFDDDRRRCLAAGMDDYLAKPFDRGDLYRLLERW 623
BLAST of mRNA_P-wetherbeei_contig13774.2.1 vs. uniprot
Match: A0A537R461_9PROT (Response regulator (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R461_9PROT) HSP 1 Score: 175 bits (444), Expect = 4.170e-51 Identity = 105/233 (45.06%), Postives = 134/233 (57.51%), Query Frame = 1
Query: 4 PISFVVCDAQCDPGEAAETLAQARKSAGGREVKGVLLIDSVTRPSLEQFRAAGFTSYLVRPVRPSALLARFG-----VEPASVAFDERAEAPADAEAVASGEFEGRHVLLAEDNAVNALLARRMLEKAGCTVVHAEDGEAAVVEVSRAMEPGGQPFDLVLMDLHMPRLDGLSAAARIRAIAGGMGRSAELPPIVALTANAFAEDRERCLAGGLDDYLAKPFHRNELRDLLARW 687
P + ++ D + AA L +AR A R+V+GV+++D+ + QFR AGF +YLVRPVRP ++L G +EP V + VLL EDN +NALLARRMLEK GCTV H +G AV R + P+DLVLMD HMP LDGL A I+A+ +A +PPI+A+TANAF EDR RC G+DDYLAKPF R EL LL +W
Sbjct: 8 PFTRLIVDGRSGCQTAARLLTRARAGAP-RDVQGVIVLDTAAKADFAQFRDAGFDAYLVRPVRPRSVLMHLGTGHEPIEPVQVTVEXXXXXXXXV---------SPSVLLVEDNDINALLARRMLEKVGCTVQHCVNGREAVDAFKRVLAGSDAPYDLVLMDAHMPVLDGLEATRAIKALYAAQD-AATVPPIIAVTANAFDEDRRRCFEAGMDDYLAKPFDREELYRLLEQW 229
BLAST of mRNA_P-wetherbeei_contig13774.2.1 vs. uniprot
Match: A0A6I0EE43_HYPSQ (Histidine kinase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EE43_HYPSQ) HSP 1 Score: 182 bits (462), Expect = 2.410e-49 Identity = 109/229 (47.60%), Postives = 143/229 (62.45%), Query Frame = 1
Query: 4 PISFVVCDAQCDPGEAAETLAQARKSAGGREVKGVLLIDSVTRPSLEQFRAAGFTSYLVRPVRPSALLARFGVEPA-SVAFDERAEAPADAEAVASGEFEGRHVLLAEDNAVNALLARRMLEKAGCTVVHAEDGEAAVVEVSRAMEPGGQPFDLVLMDLHMPRLDGLSAAARIRAIAGGMGRSAELPPIVALTANAFAEDRERCLAGGLDDYLAKPFHRNELRDLLARW 687
PI +V D P A LA+AR+ V+G++L++ + R SL +FRAAGF +YLVRPVRP+++L + G+ + S + ER +A A G R VLLAEDN +N+LLA+R+LEK GC V +G AV V RA+E DLVLMD+ MP+LDG+ AA I+ + R PPIVALTANAFAEDR+R L G+DDYLAKPF + L +L RW
Sbjct: 576 PIDRLVVDGAEGPAAAGGLLAKARQLNRQANVRGIVLVNVLARASLSEFRAAGFDAYLVRPVRPASMLMQLGLRGSESPSAVERPDALGSPPQPALGGISPRRVLLAEDNEINSLLAKRVLEKCGCDYVAVTNGADAVAVVRRALEGEVCGVDLVLMDIFMPQLDGIEAARAIKELYARAPRCIAAPPIVALTANAFAEDRQRYLDAGMDDYLAKPFDKASLETVLMRW 804
BLAST of mRNA_P-wetherbeei_contig13774.2.1 vs. uniprot
Match: A0A2S5PEP7_HYPSQ (Histidine kinase n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5PEP7_HYPSQ) HSP 1 Score: 179 bits (453), Expect = 5.440e-48 Identity = 108/239 (45.19%), Postives = 151/239 (63.18%), Query Frame = 1
Query: 1 MPISFVVCDAQCDPGEAAETLAQARKSAGGREVKGVLLIDSVTRPSLEQFRAAGFTSYLVRPVRPSALLARFGVEPASVAFDERAEAPADAEAVASGEFEGR------HVLLAEDNAVNALLARRMLEKAGCTVVHAEDGEAAVVEVSRAMEPGGQPFDLVLMDLHMPRLDGLSAAARIRAIAGGMGRSAEL-PPIVALTANAFAEDRERCLAGGLDDYLAKPFHRNELRDLLARWDRQ 696
+P + +V DA P +AAE LAQAR +A +V+G+LL++ + R +L +R AGF +YLVRPVRP+A L + G++ ++RA ADA + R VLLAEDN +NALLARRM+E GC V ++G+ A+ + A++ DLVLMD+ MP +DG+ AA RI A+ + + PPIVALTANAFAEDR+R ++ G+DDYL+KPF R L +L RW R+
Sbjct: 618 VPFNRIVVDAGGRPSDAAELLAQARAAAPAGKVRGLLLVNVLARAALRDYREAGFDAYLVRPVRPAAFLDQLGLQSPDWPSEKRAIV-ADANRNQPLWADDRDLLRQPRVLLAEDNDINALLARRMIEGTGCVVEWVKNGQDAIARIQAAVKGEAAAIDLVLMDIFMPHVDGVEAAQRIMALFDATDPTVSVRPPIVALTANAFAEDRQRYVSAGMDDYLSKPFDRPALNSVLERWLRR 855
BLAST of mRNA_P-wetherbeei_contig13774.2.1 vs. uniprot
Match: UPI0019B7396C (Response regulator n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=UPI0019B7396C) HSP 1 Score: 175 bits (444), Expect = 4.880e-47 Identity = 104/229 (45.41%), Postives = 142/229 (62.01%), Query Frame = 1
Query: 4 PISFVVCDAQCDPGEAAETLAQARKSAGGREVKGVLLIDSVTRPSLEQFRAAGFTSYLVRPVRPSALLARFGV-EPASVAFDERAEAPADAEAVASGEFEGRHVLLAEDNAVNALLARRMLEKAGCTVVHAEDGEAAVVEVSRAMEPGGQPFDLVLMDLHMPRLDGLSAAARIRAIAGGMGRSAELPPIVALTANAFAEDRERCLAGGLDDYLAKPFHRNELRDLLARW 687
P +V D PG A LA+AR+ +V+G++L++ + R SL +FR AGF +YLVRPVRP++L+ G+ P + RAE PA + +G R VLLAEDN +NALLA+R+LEK GC + +G AV V + + + DL+LMD+ MP+LDGL AA I+ + PPIVALTANAFAED++R L G+DDYLAKPF ++ L +L RW
Sbjct: 510 PFDRLVIDGVEGPGAAGGLLAKARQLNRHAKVRGIVLVNVLARASLSEFRTAGFDAYLVRPVRPASLMLHLGLCRPEETSAVVRAE-PAVPASPQAGWKSARRVLLAEDNEINALLAKRVLEKCGCEHLAVANGAEAVAAVEQILRGETRGVDLILMDIFMPQLDGLEAARTIKQLYASAPVGTGAPPIVALTANAFAEDKQRYLEAGMDDYLAKPFDKSGLEAVLHRW 737
BLAST of mRNA_P-wetherbeei_contig13774.2.1 vs. uniprot
Match: A0A833D742_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A833D742_9HYPH) HSP 1 Score: 174 bits (440), Expect = 2.190e-46 Identity = 111/241 (46.06%), Postives = 142/241 (58.92%), Query Frame = 1
Query: 10 SFVVCDAQCDPGEAAETLAQARKSAGGREVKGVLLIDSVTRPSLEQFRAAGFTSYLVRPVRPSALLARFGVEPASVAFDERAEAPADAEAVASGEFEGR-------HVLLAEDNAVNALLARRMLEKAGCTVVHAEDGEAAVVEVSRAMEPGGQPFDLVLMDLHMPRLDGLSAAARIRA-------IAGGMGRSAEL-PPIVALTANAFAEDRERCLAGGLDDYLAKPFHRNELRDLLARW 687
+ ++ D D A L AR+S G E +GV+L+ + R L++ R AGF +YLVRPVR +LLA+ EP AE PA A ASG G VLL EDN + ALLA RMLEKAGC V A DG A+ + R +EPG P DLVLMD+HMP ++GL A I+A + G G + + PIVALTANAFAEDR+RCL G+DD+L KPF R++L +L +W
Sbjct: 531 NVILTDLVLDTSAAKLLLTSARQSPGCGEARGVVLVAAAERQRLKELRKAGFEAYLVRPVRVRSLLAQL-CEPGQRPL---AEKPA---ASASGMLTGTTHAARKSRVLLVEDNEIGALLATRMLEKAGCEVRRARDGAEALRSIERGLEPGNTPTDLVLMDVHMPGMNGLDATRAIKAWLRAVADVDGAKGNARSVFVPIVALTANAFAEDRKRCLEAGMDDFLTKPFDRSQLEGILEKW 764
BLAST of mRNA_P-wetherbeei_contig13774.2.1 vs. uniprot
Match: A0A849TKL9_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A849TKL9_9HYPH) HSP 1 Score: 169 bits (429), Expect = 3.570e-46 Identity = 105/233 (45.06%), Postives = 134/233 (57.51%), Query Frame = 1
Query: 1 MPISFVVCDAQCDPGEAAETLAQARKSAGGREVKGVLLIDSVTRPSLEQFRAAGFTSYLVRPVRPSALLARFGVEPASVAFDERAEAPADAEAVASGEFEGRHVLLAEDNAVNALLARRMLEKAGCTVVHAEDGEAAVVEVSRAMEPGGQPFDLVLMDLHMPRLDGLSAAARIRAIAGGMGRSAELPPIVALTANAFAEDRERCLAGGLDDYLAKPFHRNELRDLLARWDRQR 699
+P + ++ P AA AR + + V+ ++++D+ R +E +R AG +YLVRPVRP++LL + V E A + + E VLL EDN +NALLARRMLEK GC V H DG AV V A +D+VLMDLHMP +DG+ A I A+ R A PPIVALTANAFAEDR RCLA G+DDYLAKPF +EL +L RW QR
Sbjct: 281 VPFNTLIFAGMTSPEVAASLCDVARNANQSQRVRPIVVVDAGGRALIEAYRNAGLDNYLVRPVRPTSLLRECANTGSCVTEFESAPVAPGPKPTPAHEKPKYRVLLVEDNDINALLARRMLEKTGCHVTHVRDGRVAVDTVIDAPR-----YDIVLMDLHMPVMDGIEATRAIHAL-----RLANRPPIVALTANAFAEDRARCLAAGMDDYLAKPFEPSELSGILVRWCAQR 503
BLAST of mRNA_P-wetherbeei_contig13774.2.1 vs. uniprot
Match: A0A6N6T0H5_9HYPH (Histidine kinase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T0H5_9HYPH) HSP 1 Score: 172 bits (436), Expect = 4.390e-46 Identity = 103/233 (44.21%), Postives = 135/233 (57.94%), Query Frame = 1
Query: 4 PISFVVCDAQCDPGEAAETLAQARKSAGGREVKGVLLIDSVTRPSLEQFRAAGFTSYLVRPVRPSALLARFGVEPASVAFDERAEAPADAEAVASGEFE----GRHVLLAEDNAVNALLARRMLEKAGCTVVHAEDGEAAVVEVSRAMEPGGQPFDLVLMDLHMPRLDGLSAAARIRAI-AGGMGRSAELPPIVALTANAFAEDRERCLAGGLDDYLAKPFHRNELRDLLARW 687
P + V+ D + A + LAQAR++A R+V+G++L+D+ + FRA GF +YLVRPVRP ++L G P E P + A + VLL EDN +NALLARRMLEK GC V + +G AV R + P DL+LMD+HMP LDGL A+ I + A + PPIVA+TANAF EDR RC+ G+DDYLAKPF R +L +L RW
Sbjct: 465 PFTTVLVDGRVGRETAGQLLAQARQAAPERQVQGIILLDTAAKADFADFRAVGFDAYLVRPVRPQSVLTHVGAVPVHAG-----EMPVPTKPKAQPRWRTGGAAPVVLLVEDNDINALLARRMLEKTGCEVRVSLNGRDAVEACRRVLAGLDTPIDLILMDVHMPVLDGLDASRIITELFAARTNEALHRPPIVAVTANAFEEDRRRCMEAGMDDYLAKPFDREDLLQVLQRW 692
BLAST of mRNA_P-wetherbeei_contig13774.2.1 vs. uniprot
Match: A0A7C0WEA9_9HYPH (Response regulator n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C0WEA9_9HYPH) HSP 1 Score: 162 bits (409), Expect = 6.790e-46 Identity = 104/214 (48.60%), Postives = 127/214 (59.35%), Query Frame = 1
Query: 70 ARKSAGGREVKGVLLIDSVTRPSLEQFRAAGFTSYLVRPVRPSALLARFGVEPAS--VAFDERAEAPADAEAVASGEFEGR--HVLLAEDNAVNALLARRMLEKAGCTVVHAEDGEAAVVEVSRAMEPGGQPFDLVLMDLHMPRLDGLSAAARIRAI----AGGMGRSAELPPIVALTANAFAEDRERCLAGGLDDYLAKPFHRNELRDLLARW 687
AR AG +VK +++ID R + + + GF +YLVRP RP++L A+ E S + A A E A G E R VLLAEDN +NALLAR+MLE+ GC VVHA +GE A A FDL+LMD+HMP +DGL A I + + G GR PPIVALTANAF EDRE+ L GLDDYLAKPF R EL LL +W
Sbjct: 8 ARGDAG--DVKSIVMIDPHQRGEISRLKELGFDAYLVRPARPASLFAQLSTEGQSEYAGLHDAARQLAALEGGAKGADEPRPRRVLLAEDNDINALLARKMLERVGCDVVHARNGEEACKAARAAYLSKQGHFDLILMDIHMPEMDGLDATREICELYADASPGAGRR---PPIVALTANAFPEDREQYLEAGLDDYLAKPFEREELDTLLEKW 216 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13774.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13774.2.1 >prot_P-wetherbeei_contig13774.2.1 ID=prot_P-wetherbeei_contig13774.2.1|Name=mRNA_P-wetherbeei_contig13774.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=239bp MPISFVVCDAQCDPGEAAETLAQARKSAGGREVKGVLLIDSVTRPSLEQFback to top mRNA from alignment at P-wetherbeei_contig13774:905..1621- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13774.2.1 ID=mRNA_P-wetherbeei_contig13774.2.1|Name=mRNA_P-wetherbeei_contig13774.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=717bp|location=Sequence derived from alignment at P-wetherbeei_contig13774:905..1621- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13774:905..1621- >mRNA_P-wetherbeei_contig13774.2.1 ID=mRNA_P-wetherbeei_contig13774.2.1|Name=mRNA_P-wetherbeei_contig13774.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=717bp|location=Sequence derived from alignment at P-wetherbeei_contig13774:905..1621- (Phaeothamnion wetherbeei SAG_119_79)back to top |