mRNA_P-wetherbeei_contig13772.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13772.2.1 vs. uniprot
Match: A0A3D5DGP0_9GAMM (FAD-binding oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DGP0_9GAMM) HSP 1 Score: 361 bits (926), Expect = 2.390e-120 Identity = 182/263 (69.20%), Postives = 218/263 (82.89%), Query Frame = 1
Query: 1 MTFEARLADCLPPGALLTSDEAKRPYECDALSAYHAMPRVVVVPETRTQLEAVVKLCAEYDVPLVTRGAGTGLSGGALPLVDGCLLSLARFNRILDIDTANRTATVEPGVRNLAISEAVAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVIEVEILTIEGEWMTLGGRGLDAAGFDLLALIHGSEGLLGIIMKITVKLLPRPALARVVLAAFDSVEEAGSAVAAIIAAGLVPAGLEMMDKLAIEVAEAYCHA 789
M FE LA LP LLT+ E KRPYE D L+AY A+PRVVV+P TR +++A+VK+CA Y VP+V RGAGTGLSGGALPL +GCLLSLA+FNRI ID NR A VEPGVRNLAISEA A YGLYYAPDPSSQIAC+IGGNVAENSGGVHCLKYGLTV+NV+ V++LT EGEW+T+G LD+ G+DLLA+++GSEG+LGIIM+ITVKLLPRP +ARV+L AF +V++A VA +IAAG+ P+GLEMMD+LAI AE +C A
Sbjct: 1 MDFETELAAILPAEGLLTAVEEKRPYESDGLAAYRAVPRVVVLPRTRDEVQAIVKVCAAYGVPIVARGAGTGLSGGALPLEEGCLLSLAKFNRIKHIDPDNRIAVVEPGVRNLAISEAAAVYGLYYAPDPSSQIACSIGGNVAENSGGVHCLKYGLTVNNVLAVDVLTAEGEWLTVGCSALDSPGYDLLAMVNGSEGMLGIIMQITVKLLPRPPVARVMLGAFCAVQDAADTVADVIAAGITPSGLEMMDQLAIGAAEEFCRA 263
BLAST of mRNA_P-wetherbeei_contig13772.2.1 vs. uniprot
Match: A0A523P3G4_9PROT (FAD-binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P3G4_9PROT) HSP 1 Score: 360 bits (925), Expect = 4.760e-120 Identity = 178/263 (67.68%), Postives = 217/263 (82.51%), Query Frame = 1
Query: 1 MTFEARLADCLPPGALLTSDEAKRPYECDALSAYHAMPRVVVVPETRTQLEAVVKLCAEYDVPLVTRGAGTGLSGGALPLVDGCLLSLARFNRILDIDTANRTATVEPGVRNLAISEAVAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVIEVEILTIEGEWMTLGGRGLDAAGFDLLALIHGSEGLLGIIMKITVKLLPRPALARVVLAAFDSVEEAGSAVAAIIAAGLVPAGLEMMDKLAIEVAEAYCHA 789
+ FE LA+ L ALLT+ E KRPYECD LSAY +PRVVV+P++R Q+ VVK+CAE+ VP+V RGAGTGLSGGALPL +GCLL L +FNRI+ ID NR A VEPGVRN+AIS+A A YGLYYAPDPSSQIAC+IGGNVAENSGGVHCLKYGLTVHNV+ VEILT +GEW+T+G LD+ G+DLLA+++GSEG+LGIIM+IT+KLLP P +ARV+L FD VE A +A A +I AG++PAGLEMMD++A+ AE +CHA
Sbjct: 12 VNFEDALAEVLASDALLTTVEDKRPYECDGLSAYQQIPRVVVLPQSRRQVAEVVKICAEHAVPVVARGAGTGLSGGALPLEEGCLLCLTKFNRIISIDPDNRIAVVEPGVRNVAISDAAAAYGLYYAPDPSSQIACSIGGNVAENSGGVHCLKYGLTVHNVLAVEILTAQGEWLTVGAAALDSPGYDLLAVLNGSEGMLGIIMQITLKLLPCPPVARVLLGVFDDVEAAANAAAGVIGAGIIPAGLEMMDQMALRAAEDFCHA 274
BLAST of mRNA_P-wetherbeei_contig13772.2.1 vs. uniprot
Match: A0A6N0HSH0_9GAMM (FAD-binding protein n=2 Tax=Gammaproteobacteria incertae sedis TaxID=118884 RepID=A0A6N0HSH0_9GAMM) HSP 1 Score: 357 bits (917), Expect = 8.990e-119 Identity = 177/253 (69.96%), Postives = 215/253 (84.98%), Query Frame = 1
Query: 31 LPPGALLTSDEAKRPYECDALSAYHAMPRVVVVPETRTQLEAVVKLCAEYDVPLVTRGAGTGLSGGALPLVDGCLLSLARFNRILDIDTANRTATVEPGVRNLAISEAVAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVIEVEILTIEGEWMTLGGRGLDAAGFDLLALIHGSEGLLGIIMKITVKLLPRPALARVVLAAFDSVEEAGSAVAAIIAAGLVPAGLEMMDKLAIEVAEAYCHA 789
+P LLT +E+ PYECD LSAY +P +VV+P TQ+EA++KLC E DVP+V RGAGTGLSGGALP +G LLSLARFN+ILDID RTA V+PGVRNLAISEAVAP+GLYYAPDPSSQIACTIGGNVAEN+GGVHCLKYGLTVHN+ +++++TIEGE + +GG GLD+AG+DLLAL+ GSEG+LG+I+++TVKLLPRP A+VVLAAFD + +AG AV AIIAAG++P GLEMMDKLAI+ AE + HA
Sbjct: 27 VPADGLLTDEESLHPYECDGLSAYRRLPLLVVLPTEVTQVEAILKLCNELDVPVVARGAGTGLSGGALPFEEGILLSLARFNQILDIDPQRRTARVQPGVRNLAISEAVAPHGLYYAPDPSSQIACTIGGNVAENAGGVHCLKYGLTVHNIQQIKVITIEGELLEIGGNGLDSAGYDLLALMTGSEGMLGVIVEVTVKLLPRPERAQVVLAAFDDIAKAGGAVGAIIAAGIIPGGLEMMDKLAIQAAEDFVHA 279
BLAST of mRNA_P-wetherbeei_contig13772.2.1 vs. uniprot
Match: UPI00098A3442 (FAD-binding protein n=1 Tax=unclassified Methylocaldum TaxID=2622260 RepID=UPI00098A3442) HSP 1 Score: 355 bits (910), Expect = 1.060e-117 Identity = 180/261 (68.97%), Postives = 216/261 (82.76%), Query Frame = 1
Query: 7 FEARLADCLPPGALLTSDEAKRPYECDALSAYHAMPRVVVVPETRTQLEAVVKLCAEYDVPLVTRGAGTGLSGGALPLVDGCLLSLARFNRILDIDTANRTATVEPGVRNLAISEAVAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVIEVEILTIEGEWMTLGGRGLDAAGFDLLALIHGSEGLLGIIMKITVKLLPRPALARVVLAAFDSVEEAGSAVAAIIAAGLVPAGLEMMDKLAIEVAEAYCHA 789
F L++ + G LL E RPYECD LSAY +P +V +PET +++AVV+LC E+ VP+V RGAGTGLSGGALP+ +G LLSLA+FNRI++ID ANRTA V+PGVRNLAISEA APYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNV++V ++T++GE + LGG G D+ G+DLLALI GSEGLLG+I++ITVKLLP P A+V+LA+FDSVEEAG AVAAII AGL+PAGLEMMD + I V E + HA
Sbjct: 20 FLCLLSEHIERGRLLFDTEDLRPYECDGLSAYRELPWIVALPETIEEVQAVVRLCREHGVPVVARGAGTGLSGGALPIANGVLLSLAKFNRIIEIDRANRTARVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVLQVRVVTMDGELVVLGGSGYDSPGYDLLALITGSEGLLGVIVEITVKLLPIPPCAQVLLASFDSVEEAGGAVAAIIGAGLLPAGLEMMDNITIRVVEDFVHA 280
BLAST of mRNA_P-wetherbeei_contig13772.2.1 vs. uniprot
Match: A0A7C7UHG4_9GAMM (FAD-binding protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C7UHG4_9GAMM) HSP 1 Score: 353 bits (905), Expect = 4.870e-117 Identity = 176/249 (70.68%), Postives = 215/249 (86.35%), Query Frame = 1
Query: 43 ALLTSDEAKRPYECDALSAYHAMPRVVVVPETRTQLEAVVKLCAEYDVPLVTRGAGTGLSGGALPLVDGCLLSLARFNRILDIDTANRTATVEPGVRNLAISEAVAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVIEVEILTIEGEWMTLGGRGLDAAGFDLLALIHGSEGLLGIIMKITVKLLPRPALARVVLAAFDSVEEAGSAVAAIIAAGLVPAGLEMMDKLAIEVAEAYCHA 789
A+L S+E RPYECD LSAY A+P +VV+P T Q++A+++LC E VP+V RGAGTGLSGGALP D LLSLARFNRILDID NRTATVEPGVRNLAISEAVA +GL+YAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHN++++++LTIEGE +TLG GLD+ G+DLLAL++GSEG+LG+++++TV+LLPRP RV+LAAF+++ +AG AV AIIAAG++PAGLEMMD LAI AEA+ HA
Sbjct: 25 AVLISEEDLRPYECDGLSAYRALPLLVVLPVTVEQVQAILRLCHERGVPVVARGAGTGLSGGALPDPDAILLSLARFNRILDIDPQNRTATVEPGVRNLAISEAVAQHGLFYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNILQLKLLTIEGELLTLGSHGLDSPGYDLLALLNGSEGMLGVVVEVTVRLLPRPERTRVLLAAFETIAQAGDAVGAIIAAGIIPAGLEMMDNLAIRAAEAFVHA 273
BLAST of mRNA_P-wetherbeei_contig13772.2.1 vs. uniprot
Match: A0A1B4XED9_9GAMM (FAD-binding protein n=1 Tax=Sulfuricaulis limicola TaxID=1620215 RepID=A0A1B4XED9_9GAMM) HSP 1 Score: 353 bits (905), Expect = 5.500e-117 Identity = 174/262 (66.41%), Postives = 217/262 (82.82%), Query Frame = 1
Query: 4 TFEARLADCLPPGALLTSDEAKRPYECDALSAYHAMPRVVVVPETRTQLEAVVKLCAEYDVPLVTRGAGTGLSGGALPLVDGCLLSLARFNRILDIDTANRTATVEPGVRNLAISEAVAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVIEVEILTIEGEWMTLGGRGLDAAGFDLLALIHGSEGLLGIIMKITVKLLPRPALARVVLAAFDSVEEAGSAVAAIIAAGLVPAGLEMMDKLAIEVAEAYCHA 789
+ ARL + +P ++LT +E RPYECD LSAY +P +V +PET Q+ +++LC+E D+P+V RGAGTGLSGGALPL DG LLSLA+FNRIL++D ANRTATV+PGVRNLAISEA APYGLYYAPDPSSQ+AC+IGGNVAEN+GGVHCLKYGLTVHNV ++ +T++GE +TLGG+ LD G+DLLAL+ GSEG+LG++++ TVKLLP+P A+V+LA FD +E AG AVAAIIA+G +PAGLEMMD LAI AEAY A
Sbjct: 16 SLAARLREFMPRSSVLTEEEDLRPYECDGLSAYRRLPWIVALPETVEQVGRLLRLCSEQDIPVVARGAGTGLSGGALPLEDGVLLSLAKFNRILEVDPANRTATVQPGVRNLAISEAAAPYGLYYAPDPSSQLACSIGGNVAENAGGVHCLKYGLTVHNVTGIKFMTMDGELITLGGKALDIPGYDLLALMTGSEGMLGVMVEFTVKLLPKPERAQVMLAVFDEIETAGDAVAAIIASGFLPAGLEMMDNLAIRAAEAYAKA 277
BLAST of mRNA_P-wetherbeei_contig13772.2.1 vs. uniprot
Match: A0A1F6U3Y2_9PROT (Glycolate oxidase subunit GlcD n=1 Tax=Candidatus Muproteobacteria bacterium RIFCSPLOWO2_01_FULL_60_18 TaxID=1817768 RepID=A0A1F6U3Y2_9PROT) HSP 1 Score: 351 bits (900), Expect = 3.330e-116 Identity = 174/259 (67.18%), Postives = 215/259 (83.01%), Query Frame = 1
Query: 13 ARLADCLPPGALLTSDEAKRPYECDALSAYHAMPRVVVVPETRTQLEAVVKLCAEYDVPLVTRGAGTGLSGGALPLVDGCLLSLARFNRILDIDTANRTATVEPGVRNLAISEAVAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVIEVEILTIEGEWMTLGGRGLDAAGFDLLALIHGSEGLLGIIMKITVKLLPRPALARVVLAAFDSVEEAGSAVAAIIAAGLVPAGLEMMDKLAIEVAEAYCHA 789
A+L + +P A+LT E PYECD LSAY +P +V +P+T Q+ +++LC E+D+P+V RGAGTGLSGGALPL DG LLSL++FNRIL+IDTANRTATVEPGVRNLAI++A APYGLYYAPDPSSQ+AC+IGGNVAEN+GGVHCLKYGLTVHNV+ ++ +T++GE +TLGG+ LD G+DLLAL+ GSEG+LG+I++ITVKLLP+P A+VVLA FD +E+AG AVAAIIA G VPAGLEMMD LAI E Y A
Sbjct: 21 AQLREFMPRAAVLTDKEDLHPYECDGLSAYRRLPWIVALPDTVEQVGRILRLCHEHDIPVVARGAGTGLSGGALPLEDGVLLSLSKFNRILEIDTANRTATVEPGVRNLAITDAAAPYGLYYAPDPSSQLACSIGGNVAENAGGVHCLKYGLTVHNVLGLKFMTMDGELITLGGKALDIPGYDLLALMTGSEGMLGVIVEITVKLLPKPERAQVVLAVFDEIEKAGDAVAAIIAGGFVPAGLEMMDNLAIRATEEYVKA 279
BLAST of mRNA_P-wetherbeei_contig13772.2.1 vs. uniprot
Match: UPI000F84B450 (FAD-binding protein n=1 Tax=Sulfuriflexus mobilis TaxID=1811807 RepID=UPI000F84B450) HSP 1 Score: 350 bits (899), Expect = 4.440e-116 Identity = 177/257 (68.87%), Postives = 215/257 (83.66%), Query Frame = 1
Query: 19 LADCLPPGALLTSDEAKRPYECDALSAYHAMPRVVVVPETRTQLEAVVKLCAEYDVPLVTRGAGTGLSGGALPLVDGCLLSLARFNRILDIDTANRTATVEPGVRNLAISEAVAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVIEVEILTIEGEWMTLGGRGLDAAGFDLLALIHGSEGLLGIIMKITVKLLPRPALARVVLAAFDSVEEAGSAVAAIIAAGLVPAGLEMMDKLAIEVAEAYCHA 789
LA LP G++L+++E +PYECD LSAY A P VVV+PET +++ V+++C D P+V RGAGTGLSGGALP G LLSLA+FNRILDID NR A VEPGVRNLAISEAV +GLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNV++++ LT++GE T+G + LD GFDLLALIHGSEGLLG+I+++TVKLLPRP +V+LAA+D +E+AG+AVA IIAAG++PAGLEMMDKLAI+ AE + HA
Sbjct: 21 LAATLPAGSILSAEEDLKPYECDGLSAYRATPFVVVLPETVDEVQHVLRICQRLDTPVVVRGAGTGLSGGALPHERGVLLSLAKFNRILDIDPHNRCARVEPGVRNLAISEAVDNFGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVLQIKFLTMDGELHTVGSKALDGPGFDLLALIHGSEGLLGVIIEVTVKLLPRPQRVQVMLAAYDDIEKAGAAVADIIAAGIIPAGLEMMDKLAIQAAEDFVHA 277
BLAST of mRNA_P-wetherbeei_contig13772.2.1 vs. uniprot
Match: UPI0003F84E37 (FAD-binding protein n=1 Tax=Methylocaldum szegediense TaxID=73780 RepID=UPI0003F84E37) HSP 1 Score: 350 bits (898), Expect = 6.880e-116 Identity = 180/261 (68.97%), Postives = 212/261 (81.23%), Query Frame = 1
Query: 7 FEARLADCLPPGALLTSDEAKRPYECDALSAYHAMPRVVVVPETRTQLEAVVKLCAEYDVPLVTRGAGTGLSGGALPLVDGCLLSLARFNRILDIDTANRTATVEPGVRNLAISEAVAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVIEVEILTIEGEWMTLGGRGLDAAGFDLLALIHGSEGLLGIIMKITVKLLPRPALARVVLAAFDSVEEAGSAVAAIIAAGLVPAGLEMMDKLAIEVAEAYCHA 789
F L++ + LL E RPYECD LSAY +P +V +PET Q++AV++LC E+ VP+V RGAGTGLSGGALP+ +G LLSLA+FNRIL+ID NRTA V+PGVRNLAISEA APYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNV++V I+T++GE +TLGG G D G+DLLALI GSEGLLG+I++ITVKLLP P A+V+LA+FDSVE AG AVAAII AGLVPAGLEMMD + I E + HA
Sbjct: 20 FLRLLSEHIGNNGLLFDAEDLRPYECDGLSAYRELPWIVALPETIEQVQAVLRLCREHGVPVVARGAGTGLSGGALPVANGVLLSLAKFNRILEIDPVNRTARVQPGVRNLAISEAAAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVLQVRIVTMDGELLTLGGSGYDGPGYDLLALITGSEGLLGVIVEITVKLLPIPPCAQVLLASFDSVEAAGEAVAAIIGAGLVPAGLEMMDNMTIRAVEDFVHA 280
BLAST of mRNA_P-wetherbeei_contig13772.2.1 vs. uniprot
Match: A0A0S7ZY27_9GAMM (Glycolate oxidase subunit GlcD n=1 Tax=Gammaproteobacteria bacterium SG8_15 TaxID=1703403 RepID=A0A0S7ZY27_9GAMM) HSP 1 Score: 348 bits (893), Expect = 2.190e-115 Identity = 171/258 (66.28%), Postives = 216/258 (83.72%), Query Frame = 1
Query: 16 RLADCLPPGALLTSDEAKRPYECDALSAYHAMPRVVVVPETRTQLEAVVKLCAEYDVPLVTRGAGTGLSGGALPLVDGCLLSLARFNRILDIDTANRTATVEPGVRNLAISEAVAPYGLYYAPDPSSQIACTIGGNVAENSGGVHCLKYGLTVHNVIEVEILTIEGEWMTLGGRGLDAAGFDLLALIHGSEGLLGIIMKITVKLLPRPALARVVLAAFDSVEEAGSAVAAIIAAGLVPAGLEMMDKLAIEVAEAYCHA 789
+L LP A+L+S E RPYECD LSAY +P +VV+PET Q++A+++ C ++P+V RGAGTGLSGGALPL +G LL LA+FNRILDID NRTA V+PGVRNLAISEA APYGLYYAPDPSSQIAC+IGGNVAENSGGVHCLKYGLTVHN+++++I+TI+G +T+GG G DA G+D+LAL+ GSEG+LGII++ITVKLLP+P A+VV+AAFD +E+AG+AV +IAAG+VPAGLEMMD AI +E++ +A
Sbjct: 4 KLQSSLPASAILSSTEELRPYECDGLSAYRELPMLVVLPETIEQVQAIIRECVSLEIPVVARGAGTGLSGGALPLANGVLLGLAKFNRILDIDQLNRTARVQPGVRNLAISEAAAPYGLYYAPDPSSQIACSIGGNVAENSGGVHCLKYGLTVHNIMQIKIVTIDGALITIGGSGFDAPGYDVLALMTGSEGMLGIIVEITVKLLPKPEYAQVVMAAFDDLEKAGAAVGDVIAAGIVPAGLEMMDNPAIRASESFVNA 261 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13772.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13772.2.1 >prot_P-wetherbeei_contig13772.2.1 ID=prot_P-wetherbeei_contig13772.2.1|Name=mRNA_P-wetherbeei_contig13772.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp MTFEARLADCLPPGALLTSDEAKRPYECDALSAYHAMPRVVVVPETRTQLback to top mRNA from alignment at P-wetherbeei_contig13772:1008..1796+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13772.2.1 ID=mRNA_P-wetherbeei_contig13772.2.1|Name=mRNA_P-wetherbeei_contig13772.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig13772:1008..1796+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13772:1008..1796+ >mRNA_P-wetherbeei_contig13772.2.1 ID=mRNA_P-wetherbeei_contig13772.2.1|Name=mRNA_P-wetherbeei_contig13772.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig13772:1008..1796+ (Phaeothamnion wetherbeei SAG_119_79)back to top |