mRNA_P-wetherbeei_contig1376.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1376.4.1 vs. uniprot
Match: A0A835ZF34_9STRA (Snare associated Golgi protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF34_9STRA) HSP 1 Score: 256 bits (653), Expect = 4.510e-79 Identity = 130/200 (65.00%), Postives = 160/200 (80.00%), Query Frame = 1
Query: 676 IRSMGPLGYLYFGALYVVAEILAIPAIPLAASSGYLFGLAGGTSIVIASATVAAGISFQLGRTFLRSWVLEVLGDNPKFRAIDAAIGKEGFRIILLLRLSPIFPFALSNYLYGLTAVDFWPYLFGTMLGFLPGTLCYVYTG-EVGQALLGGGDGGFPWWAYAGAAGFLAFLGKTVSDVASTAIAEMDPSLKPDSDSEQDW 1272
I+S GP+GYLYFGALYV+AE+LAIPA+PL ASSGYLFGL GGT++VI SAT+AAGISF LGRTFLR WV E+LGDN KF+AID+AIG+EGF+IILLLRLSPIFPFA+SNYLYG+T+V FW YL +MLGFLPGT+ YVY G ++G + GG GG PW+ YA +A K V D+A+ A+AE++P + EQ+W
Sbjct: 2 IQSAGPMGYLYFGALYVIAEVLAIPALPLTASSGYLFGLVGGTTVVICSATIAAGISFLLGRTFLRKWVEELLGDNAKFKAIDSAIGREGFKIILLLRLSPIFPFAISNYLYGITSVPFWEYLGASMLGFLPGTIAYVYGGGQLGSLVDGGDGGGLPWYGYALGLVAVAATIKLVGDIATKAVAEIEPGIM----EEQEW 197
BLAST of mRNA_P-wetherbeei_contig1376.4.1 vs. uniprot
Match: A0A6H5L0C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C0_9PHAE) HSP 1 Score: 240 bits (612), Expect = 5.540e-70 Identity = 118/194 (60.82%), Postives = 149/194 (76.80%), Query Frame = 1
Query: 652 FLQESVDSIRSMGPLGYLYFGALYVVAEILAIPAIPLAASSGYLFGLAGGTSIVIASATVAAGISFQLGRTFLRSWVLEVLGDNPKFRAIDAAIGKEGFRIILLLRLSPIFPFALSNYLYGLTAVDFWPYLFGTMLGFLPGTLCYVYTGEVGQALLGGGDGGFPWWAYAGAAGFLAFLGKTVSDVASTAIAEMD 1233
FL SV + +GPLG +YFG LYV+AE+L IPAIPL A++G+LFG AGGT++V+ SAT+AA ISFQLGRT LR V +L +NPKFRA+D AI KEGF++ILLLRLSPIFPFALSNYLYG+T+VDF Y+ GT+LGF PGTL YVY G +G+ + GG G PW+ Y A A+L KTV ++A+ A+ EM+
Sbjct: 225 FLSSSVTKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLLEENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGGTGLPWYGYVAGAALTAYLLKTVGEIATAAVEEME 418
BLAST of mRNA_P-wetherbeei_contig1376.4.1 vs. uniprot
Match: A0A7S4I716_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I716_9STRA) HSP 1 Score: 234 bits (598), Expect = 1.980e-68 Identity = 119/193 (61.66%), Postives = 148/193 (76.68%), Query Frame = 1
Query: 655 LQESVDSIRSMGPLGYLYFGALYVVAEILAIPAIPLAASSGYLFGLAGGTSIVIASATVAAGISFQLGRTFLRSWVLEVLGDNPKFRAIDAAIGKEGFRIILLLRLSPIFPFALSNYLYGLTAVDFWPYLFGTMLGFLPGTLCYVYTGEVGQALLGGGDGGFPWWAYAGAAGFLAFLGKTVSDVASTAIAEMD 1233
L+ V S+ +MGP G+LYFG +Y VAEILAIPAIPL AS+GYLFG+ GT++V+ASA++AA ISF +GRT LR++V VL D PKF+ ID AIG+EGF+++LLLRLSPIFPFALSNYLYG T++ FWPY FGTMLGF PGT+ YVYTGE+G+AL PW+ YAG LA K V+DVA+ I +D
Sbjct: 183 LEAVVKSVEAMGPSGFLYFGIIYTVAEILAIPAIPLTASAGYLFGVTEGTAVVLASASIAAAISFIIGRTLLRTYVESVLEDYPKFKKIDKAIGREGFKLMLLLRLSPIFPFALSNYLYGATSIGFWPYFFGTMLGFTPGTIAYVYTGEIGKALTLDSATAEPWYVYAGGMTLLAGCLKVVADVATGIIENLD 375
BLAST of mRNA_P-wetherbeei_contig1376.4.1 vs. uniprot
Match: A0A7S1FUG6_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUG6_9STRA) HSP 1 Score: 227 bits (579), Expect = 1.360e-67 Identity = 116/198 (58.59%), Postives = 149/198 (75.25%), Query Frame = 1
Query: 640 DVGQFLQESVDSIRSMGPLGYLYFGALYVVAEILAIPAIPLAASSGYLFGLAGGTSIVIASATVAAGISFQLGRTFLRSWVLEVLGDNPKFRAIDAAIGKEGFRIILLLRLSPIFPFALSNYLYGLTAVDFWPYLFGTMLGFLPGTLCYVYTGEVGQALLGGGDGGFPWWAYAGAAGFLAFLGKTVSDVASTAIAEMD 1233
D Q L ++V I + G +GYLYFG +Y +AEILAIPAIPL AS+GYLFG+ GT++V+ +A+VAA +SF LGR LR V ++L DNP+F+A+DAAIGKEGF+++LLLRLSPIFPFALSNYLYG+T+V FWPY +GTMLGF PGTL YVYTGE G+AL PW+ YAG A K ++D+A+ I +M+
Sbjct: 23 DPQQLLTDAVVQIEAAGAMGYLYFGVIYTIAEILAIPAIPLTASAGYLFGVLPGTAVVLVAASVAASVSFLLGRYALRGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAGMAAPWYIYAGGLALGACGIKIIADIATRTIEDME 220
BLAST of mRNA_P-wetherbeei_contig1376.4.1 vs. uniprot
Match: A0A7S4KLV6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KLV6_GUITH) HSP 1 Score: 229 bits (585), Expect = 8.400e-67 Identity = 114/203 (56.16%), Postives = 154/203 (75.86%), Query Frame = 1
Query: 625 SLLNVDVGQFLQESVDSIRSMGPLGYLYFGALYVVAEILAIPAIPLAASSGYLFGLAGGTSIVIASATVAAGISFQLGRTFLRSWVLEVLGDNPKFRAIDAAIGKEGFRIILLLRLSPIFPFALSNYLYGLTAVDFWPYLFGTMLGFLPGTLCYVYTGEVGQALLGGGDGGFPWWAYAGAAGFLAFLGKTVSDVASTAIAEMD 1233
S+ +D + LQ+SVD I +GP GYLYF +YVVAE+LAIPAIPL AS+GYLFG+ GT +V+ SAT+AAG +F +GR FLR WV ++ + KF AID AI ++GF+++LLLRLSP+ PFALSNYLYG+T V+F YL GT++GF PGTL +V TG+VG+ ++G G+GG PW+AYAG + +GK V+ +AS AI E++
Sbjct: 128 SISTIDPQKLLQDSVDYIDQLGPTGYLYFSLIYVVAEMLAIPAIPLTASAGYLFGVVPGTCVVLVSATIAAGGAFLIGRVFLREWVEGLISKSRKFAAIDEAISRKGFQLVLLLRLSPLLPFALSNYLYGMTKVNFVEYLLGTIIGFAPGTLGFVLTGQVGREIVGVGEGGLPWYAYAGGLAAVLAIGKVVTGIASKAIEEVE 330
BLAST of mRNA_P-wetherbeei_contig1376.4.1 vs. uniprot
Match: A0A7S1FUT1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUT1_9STRA) HSP 1 Score: 228 bits (581), Expect = 4.590e-66 Identity = 123/226 (54.42%), Postives = 158/226 (69.91%), Query Frame = 1
Query: 556 VLVCAAYGINHGGDMSGIGARAASLLNVDVGQFLQESVDSIRSMGPLGYLYFGALYVVAEILAIPAIPLAASSGYLFGLAGGTSIVIASATVAAGISFQLGRTFLRSWVLEVLGDNPKFRAIDAAIGKEGFRIILLLRLSPIFPFALSNYLYGLTAVDFWPYLFGTMLGFLPGTLCYVYTGEVGQALLGGGDGGFPWWAYAGAAGFLAFLGKTVSDVASTAIAEMD 1233
V+ AA + G D IG D Q L ++V I + G +GYLYFG +Y +AEILAIPAIPL AS+GYLFG+ GT++V+ +A+VAA +SF LGR LR V ++L DNP+F+A+DAAIGKEGF+++LLLRLSPIFPFALSNYLYG+T+V FWPY +GTMLGF PGTL YVYTGE G+AL PW+ YAG A K ++D+A+ I +M+
Sbjct: 136 VITLAAVSVFLGQD---IGVVTTFAEEFDPQQLLTDAVVQIEAAGAMGYLYFGVIYTIAEILAIPAIPLTASAGYLFGVLPGTAVVLVAASVAASVSFLLGRYALRGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAGMAAPWYIYAGGLALGACGIKIIADIATRTIEDME 358
BLAST of mRNA_P-wetherbeei_contig1376.4.1 vs. uniprot
Match: A0A7S0CCP1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCP1_9STRA) HSP 1 Score: 213 bits (543), Expect = 9.880e-63 Identity = 108/186 (58.06%), Postives = 137/186 (73.66%), Query Frame = 1
Query: 661 ESVDSIRSMGPLGYLYFGALYVVAEILAIPAIPLAASSGYLFGLAGGTSIVIASATVAAGISFQLGRTFLRSWVLEVLGDNPKFRAIDAAIGKEGFRIILLLRLSPIFPFALSNYLYGLTAVDFWPYLFGTMLGFLPGTLCYVYTGEVGQALLGGGDGGFPWWAYAGA----AGFLAFLGKTVSDV 1206
E+V I+ MGP G YFG +Y +AEILAIPAIPL AS+GYLFG+ GT IV+ SA++AA ISF +GRT LRS+V +LG+ PK + +D AI +GF+I+LL+R++PIFPFALSNYLYG+T+V FWPY +GTMLGF PGT YVY+G VG+ L G D PW+ YAG +GFL G SD+
Sbjct: 2 ETVTQIQDMGPSGVAYFGFIYTIAEILAIPAIPLTASAGYLFGVRDGTLIVLLSASIAASISFFIGRTLLRSYVEGILGEYPKLQKLDRAISSQGFKIMLLVRIAPIFPFALSNYLYGVTSVKFWPYFWGTMLGFAPGTFAYVYSGVVGKILTSGDDAAQPWYVYAGGLALFSGFLKIGGDIASDI 187
BLAST of mRNA_P-wetherbeei_contig1376.4.1 vs. uniprot
Match: A0A7R9WRQ5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRQ5_9STRA) HSP 1 Score: 215 bits (548), Expect = 1.880e-62 Identity = 109/193 (56.48%), Postives = 142/193 (73.58%), Query Frame = 1
Query: 655 LQESVDSIRSMGPLGYLYFGALYVVAEILAIPAIPLAASSGYLFGLAGGTSIVIASATVAAGISFQLGRTFLRSWVLEVLGDNPKFRAIDAAIGKEGFRIILLLRLSPIFPFALSNYLYGLTAVDFWPYLFGTMLGFLPGTLCYVYTGEVGQALLGGGDGGFPWWAYAGAAGFLAFLGKTVSDVASTAIAEMD 1233
L+ VD++ SMGPLG +YFG Y +AEILAIPAIPL AS+GYLFG GT +V+ SA++AA ISF +GRT LR +V VL D PKF ID AIGKEGF+++ LLRLSP+FPFALSNYLYG ++++F + +GT+LGF PGT+ YVYTG VG+AL G +PW+ Y G L+ L K ++D A+ + E+D
Sbjct: 73 LERVVDAVASMGPLGAVYFGVAYTIAEILAIPAIPLTASAGYLFGPVQGTGVVLVSASIAAAISFLIGRTLLRDYVEGVLQDFPKFAKIDKAIGKEGFKLMFLLRLSPVFPFALSNYLYGASSINFSAFFWGTLLGFAPGTMAYVYTGYVGKALTTEGSEVYPWYFYVGGLALLSGLIKVLADTATRIVDELD 265
BLAST of mRNA_P-wetherbeei_contig1376.4.1 vs. uniprot
Match: A0A7S4A122_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A122_9STRA) HSP 1 Score: 217 bits (553), Expect = 4.870e-62 Identity = 110/186 (59.14%), Postives = 139/186 (74.73%), Query Frame = 1
Query: 676 IRSMGPLGYLYFGALYVVAEILAIPAIPLAASSGYLFGLAGGTSIVIASATVAAGISFQLGRTFLRSWVLEVLGDNPKFRAIDAAIGKEGFRIILLLRLSPIFPFALSNYLYGLTAVDFWPYLFGTMLGFLPGTLCYVYTGEVGQALLG--GGDGGFPWWAYAGAAGFLAFLGKTVSDVASTAIAE 1227
+ +GPLG YF A+YVVAE+LA+PA+PL AS+GYLFG GT+IV+ SAT+AAG+SF +GR+ LRSWV V G++ +F+AID A+ EGF+IILLLRLSPIFPFALSNY YGLTAV+F PYL T+LGF PGT YVY+GEV G G D +PW+ YAG AF+ V++VA+ A+ E
Sbjct: 167 VERLGPLGAAYFAAVYVVAEVLALPAVPLTASAGYLFGAVEGTAIVLFSATIAAGVSFLIGRSLLRSWVERVAGESAQFQAIDRAVASEGFKIILLLRLSPIFPFALSNYFYGLTAVEFGPYLAATLLGFAPGTFLYVYSGEVASVAAGAAGDDAAYPWYVYAGFLSVGAFVAAKVTEVATRALEE 352
BLAST of mRNA_P-wetherbeei_contig1376.4.1 vs. uniprot
Match: A0A7R9U9H4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9H4_9STRA) HSP 1 Score: 213 bits (543), Expect = 8.570e-61 Identity = 109/207 (52.66%), Postives = 144/207 (69.57%), Query Frame = 1
Query: 628 LLNVDVGQFLQESVDSIRSMGPLGYLYFGALYVVAEILAIPAIPLAASSGYLFGLAGGTSIVIASATVAAGISFQLGRTFLRSWVLEVLGDNPKFRAIDAAIGKEGFRIILLLRLSPIFPFALSNYLYGLTAVDFWPYLFGTMLGFLPGTLCYVYTGEVGQALL-----GGGDGGFPWWAYAGAAGFLAFLGKTVSDVASTAIAEMD 1233
L N DV + L+ +V I GP+GY+YF +Y +AE++A+PA+PL ASSGYLFG GTS+V+ SATVAA ISF L RTFLR +V NPK+ A+D A+G+EGFR++LLLRLSP+ PFALSNYLYGL+AVDFW Y +GT GF+PGT+ YVY+G+VG+ + G PW+ Y A G L VS +A A+A+++
Sbjct: 130 LQNFDVRETLEATVKVIEDAGPMGYVYFALVYTLAELVALPAVPLTASSGYLFGTFRGTSVVLLSATVAASISFLLSRTFLRQYVKGFAASNPKWSAVDKAVGREGFRLVLLLRLSPLLPFALSNYLYGLSAVDFWGYFWGTFFGFMPGTVAYVYSGQVGREVSTAVANSSMSTGTPWYIYVAALGGLGVFINVVSKIAKDAVAQIE 336 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1376.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1376.4.1 >prot_P-wetherbeei_contig1376.4.1 ID=prot_P-wetherbeei_contig1376.4.1|Name=mRNA_P-wetherbeei_contig1376.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=389bp MKRWGSQRRASAVALSGLAIASSRGEMMWKIRTCAPSRSAAFVGAGFLPRback to top mRNA from alignment at P-wetherbeei_contig1376:3910..5937+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1376.4.1 ID=mRNA_P-wetherbeei_contig1376.4.1|Name=mRNA_P-wetherbeei_contig1376.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2028bp|location=Sequence derived from alignment at P-wetherbeei_contig1376:3910..5937+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1376:3910..5937+ >mRNA_P-wetherbeei_contig1376.4.1 ID=mRNA_P-wetherbeei_contig1376.4.1|Name=mRNA_P-wetherbeei_contig1376.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1167bp|location=Sequence derived from alignment at P-wetherbeei_contig1376:3910..5937+ (Phaeothamnion wetherbeei SAG_119_79)back to top |