mRNA_P-wetherbeei_contig1376.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1376.1.3 vs. uniprot
Match: A0A6H5JIK4_9PHAE (Peptidase_M23 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIK4_9PHAE) HSP 1 Score: 292 bits (748), Expect = 5.560e-93 Identity = 152/322 (47.20%), Postives = 201/322 (62.42%), Query Frame = 1
Query: 73 NCVSDAAPGCHIANEDGAGWIVGIEAFDREEYGLSA--DDPVPDISLDPNTGMLSVINDHSTLSRSYFLTTTHPVLDSDGRVLPAGTGRDEDGQDAAMTTLILVVRPLCIMEVGRVVVPQGKAVLQARYGEQVQLHSDVKEIRPHLRPQQPVPPTRAFPFPLGGQGPFLCTQGFGGALTHFFGATWHAVDLECPVGTPILAVADGVVVEVRDGNAVGGIATRNLFLWNSVTIRTDGGVIVEYVHVAAGGAAVARGDRVAAGQVVAASGDVGFCPRPHLHIQVHESAEADAETVPFVLLAADGSPYVPKAGAWYGPSGPAPPP 1032
N V+ + PGCHIA+ D A WI+ FD E+YGL ++ VPD+ +DP+T LSVIN +S+F+TT H D R + AG R+ +G + +TTL+LVV+P ++E + V +G+A + E + L SD+K ++ H P +RA+PFPLGG PFLC+QG GG+ THFF T HA+D ECP GTPIL++A G V EVR GG+ R LF WNSVT+ + G++ EYVH+ AG A V GDRV AGQ + SG GFCP PHLH+Q+ E A TV F +L +G+ Y P AG WYGP G PPP
Sbjct: 13 NYVASSQPGCHIAHHD-AEWIIEAADFDLEDYGLEPGEEEGVPDMIVDPDTRSLSVINTGYDTDKSFFITTKHAAFDGQRRPMAAGLTRNSEGLEDLVTTLVLVVKPRGVIEACYLDVTEGQACGE----EAIDLFSDIKNVKQHPNPAA-WESSRAYPFPLGGNAPFLCSQGVGGSFTHFFPGTHHALDFECPEGTPILSLASGTVKEVRQSETAGGVHARGLFHWNSVTVLQEDGLLAEYVHILAGSALVNPGDRVEAGQPLCLSGGAGFCPTPHLHLQLQEGEGDTAPTVQFAMLDCEGNSYFPVAGKWYGPQGEVPPP 328
BLAST of mRNA_P-wetherbeei_contig1376.1.3 vs. uniprot
Match: A0A7S4DR05_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DR05_9EUKA) HSP 1 Score: 244 bits (624), Expect = 3.050e-74 Identity = 137/336 (40.77%), Postives = 195/336 (58.04%), Query Frame = 1
Query: 73 NCVSDAAPGCHIANEDGAGWIVGIEAFDREEYGLSADDPVPDISLDPNTGMLSVINDHSTLSRSYFLTTTHP---VLDSDGRVLPAGTGRDEDGQDAAMTTLILVVRPLCIMEVGRVVVP-QGKAVLQARYGEQVQLHSDVKEIR--PHLRPQQPV-------PPTRAFPFPLGGQGPFLCTQGFGGALTHFFGATWHAVDLECPVGTPILAVADGVVVEVRDGNAVGGIATRNLFLWNSVTIRTDGGVIVEYVHVAAGGAAVARGDRVAAGQVVAASGDVGFCPRPHLHIQVHESAEADAETVPFVLLAADGSP--------YVPKAGAWYGPSG 1017
N ++ + PGC++A+ + W + + FDREE+GLS D VPD+S+DP G+L+VIN S +R+Y+++ D GR L G RD GQ TL++ + P+ +++V R+ +P +G + V+L SD+ ++ PH + PP FPLGG+GP+LC+QG GG THF+ AT HA+DLECPVGTP+L++A G VV+V+D N GGI L+ WNS+++ +V+YVH+ G A V GD + AG + SGDVGFCPRPHLH+Q+ S DA TVPF + P +VP AG WY G
Sbjct: 17 NFLTASMPGCYVAHTSSS-WAIQADRFDREEFGLSPSDHVPDVSIDPEEGILTVINATSDKTRAYYVSIEGDDVAAYDRQGRRLQPGVTRDSLGQPVGCLTLVMTLPPMRMLDVCRLELPPEGPSG--------VKLSSDISDLEAGPHGQGGGSHGTHGTCDPPPLVVGFPLGGKGPYLCSQGRGGEFTHFYSATRHAIDLECPVGTPVLSIAPGEVVDVKDSNVAGGIHVSLLYAWNSISVEQKDKKVVDYVHIRQGSARVKIGDIINAGDWLCDSGDVGFCPRPHLHLQITASPAKDAPTVPFSFRCSPPPPAASKPPLSFVPFAGLWYNKDG 343
BLAST of mRNA_P-wetherbeei_contig1376.1.3 vs. uniprot
Match: A0A7S3PQW0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PQW0_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.290e-68 Identity = 146/341 (42.82%), Postives = 191/341 (56.01%), Query Frame = 1
Query: 88 AAPGCHIANEDGAGWIVGIEAFDREEYGLSADDP------VPDISLDPNTGMLSVINDHSTLSRSYFLTTTHPVLDSDGRVLPAGT-------GRD--EDGQDAAMTTLILVVRPLCIMEVGRV-VVPQGKAVLQ----ARYGEQVQLHSDVKEIRPHLRPQQPVPPTR---------AFPFPLGG-QGPFLCTQGFGGALTHFFGATWHAVDLECPVGTPILAVADGVVVEVRDGNAVGGIATRNLFLWNSVTIRTDGGVIVEYVHVAAGGAAVARGDRVAAGQVVAASGDVGFCPRPHLHIQVHESAEADAETVPFVLLAA-----DGSPYVPKAGAWY 1005
+APGC++A D A W+VG + FD E++G+ ++ +PDIS+DP T ML+VIN S+ SY ++ T GR LPA GR DGQ+ T +L+VRP+ IM+V V +P G A ++ + G+ L SD+KE PH P V + + FPL +GPFLC+QGFGG THFF T HAVD ECPVGTP++A+ DGVV VRD N V GI NLF WNSVT++ G EYVH+ G V G V+ GQ++ SG VGF PRPHLH+QV A A T+PF + + + Y PKAG Y
Sbjct: 1 SAPGCYVARFD-ADWLVGSDVFDPEDFGIGCNERDDIQEYIPDISIDPETKMLTVINSKSSTYMSYTISLT-------GRCLPARNEKYNFVPGRTIVADGQELECVTFLLLVRPMHIMDVCFVNELPCGDAGIEDDNDSIAGKSKGLFSDIKEWTPH--PNMDVAQKQNLTQNDDVNIYEFPLDPCRGPFLCSQGFGGHFTHFFAGTHHAVDFECPVGTPVVAIGDGVVTNVRDVNVVTGIHGSNLFKWNSVTVKMHDGNYAEYVHIQRGSVCVEVGQAVSTGQLLCLSGSVGFSPRPHLHLQVTRDATDSAPTIPFRIKRSSEHVNETGSYEPKAGFLY 331
BLAST of mRNA_P-wetherbeei_contig1376.1.3 vs. uniprot
Match: A0A7S0DT78_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DT78_9EUKA) HSP 1 Score: 228 bits (580), Expect = 2.180e-68 Identity = 122/302 (40.40%), Postives = 177/302 (58.61%), Query Frame = 1
Query: 142 IEAFDREEYGLSADDPVPDISLDPNTGMLSVINDHSTLSRSYFLTTTH--PVLDSDGRVLPAGTGRDEDGQDAAMTTLILVVRPLCIMEVGRVVVPQGKAVLQARYGEQVQLHSDVKEIR--------PHLRPQQPVPPTRAFPFPLGGQGPFLCTQGFGGALTHFFGATWHAVDLECPVGTPILAVADGVVVEVRDGNAVGGIATRNLFLWNSVTIRTDGGVIVEYVHVAAGGAAVARGDRVAAGQVVAASGDVGFCPRPHLHIQVHESAEADAETVPFVLLAADGSPYVPKAGAWYGPSG 1017
+E F R+E+GL PVPD+S+DP G+L++IN +T SR+Y++T + P+ D + R+L G R + TTLIL V P ++V R+ +P G + + +HSD+ ++ + Q+ FPLGG+GPF C+QG GG THF+ AT HA+D ECPVGTP+ A+A G V E+ D GGI L+ WNS+++ + G +V+YVH+ G A V +GD+V GQ + SGDVGFCP+PHLH+Q+ SA+ ++ T PF + +P AG WY P G
Sbjct: 1 MEKFHRKEFGLDPSTPVPDLSIDPEDGILTIINPSNT-SRAYYITVENDTPLYDRNDRLLSTGRHRLPNSTYINCTTLILTVPPNHTLDVCRIHLPPGGP-------QAIPIHSDISDLNLIKDSKRTKNEGKQRKAAGVSEVGFPLGGKGPFFCSQGVGGRFTHFYPATHHAIDFECPVGTPVFAIASGTVREIEDTRKAGGIHVSALYAWNSISVELEDGSLVDYVHIRTGSAKVKKGDKVTKGQHICDSGDVGFCPKPHLHLQITLSAQNNSPTTPFHFP----NRLLPTAGGWYLPDG 290
BLAST of mRNA_P-wetherbeei_contig1376.1.3 vs. uniprot
Match: A0A0G4HJ56_9ALVE (Peptidase_M23 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HJ56_9ALVE) HSP 1 Score: 226 bits (577), Expect = 5.270e-67 Identity = 135/321 (42.06%), Postives = 193/321 (60.12%), Query Frame = 1
Query: 31 SKSRREKKREKAPC-NCVSDAAPGCHIANEDGAGWIVGIEAFDREEYGLSADDPVPDISLDPNTGMLSVINDHSTLSRSYFLTTTHPVLDSDGRVLPAGTGRDEDGQDAAMTTLILVVRPLCIMEVGRVVVPQGKAVLQARYGEQVQLHSDVKEIRPHLRPQQPVPPTRAFPFPLGGQ-GPFLCTQGFGGALTHFFGATWHAVDLECPVGTPILAVADGVVVEVRDGNAVGGIATRNLFLWNSVTIR-TDGGVIVEYVHVAAGGAAVARGDRVAAGQVVAASGDVGFCPRPHLHIQVHESAEADAETVPFVLLAADGSPYV 984
SK++++K+ EK N A GCHI++ + A W++ FD +EY + +PD+S+DP++ +LS IN ++ ++++++H D +G GT RDE+G+ TT ILV+ P I+EV +V+ + + R GE + LHSDV+ ++ P P P FP + GP LCTQGFGG THFF T+HA+D CPVG P++AV +G V VRDG+ V GI NLF WNSV IR G++VEYVH+ G V G RV G+ +A +GDVGF P PHLH+QV ES DA +VPF+ G+P++
Sbjct: 10 SKNKKKKQTEKEEIFNFYPPAGKGCHISHGN-APWLISSLPFDPDEYECEPSE-LPDLSVDPDSRILSAINPTEE-TKVFYISSSHKTRDGEGNEFERGTYRDEEGEVHPCTTFILVLGPCTIVEVCEIVMSE-----EERDGE-LDLHSDVQVLKKRENPS-PSPSAAVIAFPFKVECGPLLCTQGFGGHFTHFFPNTFHAIDFRCPVGMPVVAVGNGQVTGVRDGSQVSGIHVSNLFKWNSVQIRLASSGLVVEYVHLRCGSVKVREGQRVEEGEEIAETGDVGFSPEPHLHLQVLESTADDALSVPFLF---QGTPFL 317
BLAST of mRNA_P-wetherbeei_contig1376.1.3 vs. uniprot
Match: A0A7S4HUH5_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HUH5_9EUKA) HSP 1 Score: 221 bits (564), Expect = 5.210e-66 Identity = 128/326 (39.26%), Postives = 189/326 (57.98%), Query Frame = 1
Query: 73 NCVSDAAPGCHIANEDGAGWIVGIEAFDREEYGLSADDPVPDISLDPNTGMLSVINDHSTLSRSYFLTTTHPVLDSDGRVLPAGTGRDEDGQDAAMTTLILVVRPLCIMEVGRVVVPQGKAVLQARYG-EQVQLHSDVKEI----------RP-HLRPQQPVPPTRAFPFPLGGQGPFLCTQGFGGALTHFFGATWHAVDLECPVGTPILAVADGVVVEVRDGNAVGGIATRNLFLWNSVTIRTDGGVIVEYVHVAAGGAAVARGDRVAAGQVVAASGDVGFCPRPHLHIQVHESAEADAETVPFVLLAADGSPYVPKAGAWYGPS 1014
N V + GC++A+ + A W++ FD EE+ A D VPD+SLDP T +L+ IN ++ + +SYF++ + + L G +DG + TLIL++ P +M++ +L+A +++L SD+KE+ +P ++ ++PV P + FP+GG LC+QG G THF+ T +AVDLE P+GTPILAVADG VVE+ N V GI NLF WNS+ ++ D G VEYVH+ + V+ GD+V AGQ + +G+VGFCP PHLHIQ H + + DA T+PF G+ + P AG Y P+
Sbjct: 27 NFVLGSGSGCYVAHGE-ASWVIESTPFDPEEW--DAPDSVPDLSLDPETMLLTAIN-NTKVFKSYFISFPYGARAKRNQNLKMGETTRDDGTQYNVITLILILNPYQVMDL---------CILEATCDMSEIELFSDIKELPAGWSFEQLYKPDNIEEREPVGP---YVFPIGGNKEILCSQGNHGGFTHFYPQTRYAVDLEAPIGTPILAVADGEVVEIIQSNTVSGIHANNLFKWNSLVLKLDDGNFVEYVHIRTNSSLVSVGDQVTAGQQICETGNVGFCPTPHLHIQFHSTRDPDAPTIPFTFQDIHGNIFCPVAGKTYPPA 336
BLAST of mRNA_P-wetherbeei_contig1376.1.3 vs. uniprot
Match: A0A813FP66_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FP66_POLGL) HSP 1 Score: 218 bits (555), Expect = 2.620e-64 Identity = 134/314 (42.68%), Postives = 181/314 (57.64%), Query Frame = 1
Query: 94 PGCHIANEDGAGWIVGIEAFDREEYGLSA-DDPVPDISLDPNTGMLSVINDHSTLSRSYFLT--TTHPVLDSDGRVLPAGTGRDEDGQDAAMTTLILVVRPLCIMEVGRVVVPQGKAVLQARYGEQVQLHSDVKEIRPHLRPQQPVPPTRAFPFPLGGQGPFLCTQGFGGALTHF-FGATWHAVDLECPVGTPILAVADGVVVEVRDGNAVGGIATRNLFLWNSVTIRTDGGVIVEYVHVAAGGAA--VARGDRVAAGQVVAASGDVGFCPRPHLHIQVHESAEADAETVPFVLLAADGSPYVPKAGAWYGPSG 1017
PGCH+A+ A WI+G++ D E G+ A D+P+PDIS+DP +LSVIN S + R Y+L+ + GR L GT RD DG + T +LVV P +M+V + + L+ V++ SD+ + P R++ FPL G GPFLC+QG GG LTHF +T+HA+DL+CPVGT I+A+ DG V EVRD V GI RN F WN VT+ D G + EYVH+ AG A+ V GD V GQ + SGD GFCP PHLH+++H A ++PF A G P+ + G Y +G
Sbjct: 53 PGCHVAHRR-APWILGVQ--DLESAGIQAGDEPLPDISIDPEEKVLSVINT-SDVERCYYLSLPAESGCATASGRRLATGTARDADGTVREVITFVLVVGPKKVMDVCEL-----RGSLEPH---SVEVQSDIVTLLPPPETHPSQEELRSYGFPLLGPGPFLCSQGGGGRLTHFAHPSTYHAIDLDCPVGTVIVAIHDGRVNEVRDSEQVSGIDVRNFFRWNQVTVLQDDGALAEYVHIQAGSASARVKVGDAVRRGQPICCSGDAGFCPTPHLHLEIHLEEGEAAPSIPFRFQGASG-PFRCEEGERYTAAG 353
BLAST of mRNA_P-wetherbeei_contig1376.1.3 vs. uniprot
Match: A0A1Z5K2Q0_FISSO (Peptidase_M23 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2Q0_FISSO) HSP 1 Score: 218 bits (554), Expect = 4.010e-64 Identity = 138/345 (40.00%), Postives = 192/345 (55.65%), Query Frame = 1
Query: 46 EKKREKAPC--NCVSDAAPGCHIANEDGAGWIVGIEAFDREEYGLSADDPVPDISLDPNTGMLSVINDHSTLSRSYFLTTTHPVLDSDGRVLPAGTGRDEDGQDAAMTTLILVVRP-----LCIMEVGRVVVPQ---GKAVLQARYGEQVQLHSDVKEIRPHLRPQQPVPPT-RAFPFPLGGQGP-FLCTQGFGGALTHFFGATWHAVDLECPVGTPILAVADGVVVEVRDGNAVGGIATRNLFLWNSVTIRT-----DGGVIVEYVHVAAGGAAVARGDRVAAGQVVAASGDVGFCPRPHLHIQVHESAEADAETVPFVLLAADGSPYVPKAGAWYGPSGPAPP 1029
EK + +PC N V+DA PGCHIA+ + + WI+ EA + +++ +PDI++DP +G L+V N + +Y + D+ GR+L G+ +++G+ +TTLI++ P LC++ +PQ K Q EQ++L SDV+ H P AFP P FLCTQG G LTHFF HA+D +CPVGTP+LAVAD VVV+V+D + GIA NLF WNS+ ++ D + VEYVH+ + A+V+ GD+V AGQV+ ASG VGF P PHLH + S A TV V A PY+P+A WY G A P
Sbjct: 35 EKPKVSSPCSDNFVADAGPGCHIAHPESSDWILEWEAVNADDFDADGLSDIPDIAIDPESGTLTVCNLNQYSLVAYITVYETRLRDAQGRLLEQGSTTNDEGETNQVTTLIVLCPPETFAHLCVL------LPQEETDKPTSQIDL-EQLRLESDVQPWNQHPDPSDVYHDLILAFPLRTDSTNPSFLCTQGIHGHLTHFFSGNLHAIDFQCPVGTPLLAVADAVVVQVQDHHECTGIAVTNLFHWNSILLQVKNTPPDKPLFVEYVHIQS--ASVSVGDQVQAGQVIGASGSVGFSPEPHLHFAAYRSDHPTAPTVQ-VSFAGKRGPYIPRAHEWYNDDGLAVP 369
BLAST of mRNA_P-wetherbeei_contig1376.1.3 vs. uniprot
Match: A0A6U6DJR3_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6DJR3_GUITH) HSP 1 Score: 221 bits (562), Expect = 9.880e-64 Identity = 133/330 (40.30%), Postives = 179/330 (54.24%), Query Frame = 1
Query: 73 NCVSDAAPGCHIANEDGAGWIVGIEAFDREEYGLSADDPVPDISLDPNTGMLSVINDHSTLSRSYFLTTTHPVLDSDGRVLPAGTGRDEDGQDAAMTTLILVVRPLCIMEV--------GRVVVPQGKAVLQARYGEQVQLHSDVKEIRPHLRPQQPVPPTRAFPFPLGGQGPFLCTQGFGGALTHFFGATWHAVDLECPVGTPILAVADGVVVEVRDGNAVGGIATRNLFLWNSVTIRTDGGVIVEYVHVAAGGAAVARGDRVAAGQVVAASGDVGFCPRPHLHIQVHESA---EADAETVPFVLLAADGSP----YVPKAGAWYGPSG 1017
N V D GC++A D A W+ + + RE G PD+ +DP+T +LS +N RS +++ V S G+ L R+E G++ +TT +LV++P+ +M++ GR V P + + G +Q D E P + V +F FPL G GPFLC+QGF G THFF T HAVDLECPVGT ++AVADG V + N V G +N WNSV ++ D G++VEYVH+ G GDRV G+V+ SGDVGFCP+PHLHIQ H++ A A T+PF DGS YVP AG Y G
Sbjct: 177 NFVPDFGRGCYVAYHD-AEWLEDMFKYSREILGQPKGCSPPDLIIDPDTHLLSAVNARKQ-RRSMYISVRRRVFSSMGKPLLTTPVREEGGEEHQVTTFVLVMKPMTVMDLCYVRPPRRGRRVAPSSGNLSELMNGRDIQSIIDDLEELPVEKSYASV---ASFRFPLAGDGPFLCSQGFNGHFTHFFLTTRHAVDLECPVGTEVVAVADGKVAVISQDNQVSGADCKNFLKWNSVLLQLDCGLLVEYVHIKKGSVRFKEGDRVKDGEVICESGDVGFCPKPHLHIQFHDAKLEDHAKAPTIPFKFRV-DGSTSKDDYVPVAGRMYNTRG 500
BLAST of mRNA_P-wetherbeei_contig1376.1.3 vs. uniprot
Match: L1J7B1_GUITC (Peptidase_M23 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J7B1_GUITC) HSP 1 Score: 213 bits (542), Expect = 2.260e-62 Identity = 133/336 (39.58%), Postives = 179/336 (53.27%), Query Frame = 1
Query: 73 NCVSDAAPGCHIANEDGAGWIVGIEAFDREEYGLSADDPVPDISLDPNTGMLSVINDHSTLSRSYFLTTTHPVLDSDGRVLPAGTGRDEDGQDAAMTTLILVVRPLCIMEV----------GRVVVPQGKAVLQARYGEQVQLHSDVKEIRPHLRPQQPVPPTRA----FPFPLGGQGPFLCTQGFGGALTHFFGATWHAVDLECPVGTPILAVADGVVVEVRDGNAVGGIATRNLFLWNSVTIRTDGGVIVEYVHVAAGGAAVARGDRVAAGQVVAASGDVGFCPRPHLHIQVHESA---EADAETVPFVLLAADGSP----YVPKAGAWYGPSG 1017
N V D GC++A D A W+ + + RE G PD+ +DP+T +LS +N RS +++ V S G+ L R+E G++ +TT +LV++P+ +M++ P G L E + D++ I L + PV + A F FPL G GPFLC+QGF G THFF T HAVDLECPVGT ++AVADG V + N V G +N WNSV ++ D G++VEYVH+ G GDRV G+V+ SGDVGFCP+PHLHIQ H++ A A T+PF DGS YVP AG Y G
Sbjct: 23 NFVPDFGRGCYVAYHD-AEWLEDMFKYSREILGQPKGCSPPDLIIDPDTHLLSAVNARKQ-RRSMYISVRRRVFSSMGKPLLTTPVREEGGEEHQVTTFVLVMKPMTVMDLCYKSCPLLRRATCCPPVGSRPLAGNLSELMN-GRDIQSIIDDLE-ELPVEKSYASVASFRFPLAGDGPFLCSQGFNGHFTHFFLTTRHAVDLECPVGTEVVAVADGKVAVISQDNQVSGADCKNFLKWNSVLLQLDCGLLVEYVHIKKGSVRFKEGDRVKDGEVICESGDVGFCPKPHLHIQFHDAKLEDHAKAPTIPFKFRV-DGSTSKDDYVPVAGRMYNTRG 353 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1376.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1376.1.3 >prot_P-wetherbeei_contig1376.1.3 ID=prot_P-wetherbeei_contig1376.1.3|Name=mRNA_P-wetherbeei_contig1376.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=344bp MARRKQQRKSKSRREKKREKAPCNCVSDAAPGCHIANEDGAGWIVGIEAFback to top mRNA from alignment at P-wetherbeei_contig1376:337..1834+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1376.1.3 ID=mRNA_P-wetherbeei_contig1376.1.3|Name=mRNA_P-wetherbeei_contig1376.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1498bp|location=Sequence derived from alignment at P-wetherbeei_contig1376:337..1834+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1376:337..1834+ >mRNA_P-wetherbeei_contig1376.1.3 ID=mRNA_P-wetherbeei_contig1376.1.3|Name=mRNA_P-wetherbeei_contig1376.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1032bp|location=Sequence derived from alignment at P-wetherbeei_contig1376:337..1834+ (Phaeothamnion wetherbeei SAG_119_79)back to top |