mRNA_P-wetherbeei_contig13757.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13757.3.1 vs. uniprot
Match: A0A3C0TZ14_9PROT (Exodeoxyribonuclease 7 small subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TZ14_9PROT) HSP 1 Score: 121 bits (304), Expect = 2.550e-34 Identity = 66/87 (75.86%), Postives = 73/87 (83.91%), Query Frame = 1
Query: 1 MSEKKKTASLESVTGLSFEAALRELESIVARLESGQVDLEESISIYERGSQLKAHCDAKLKDAQAKVEKIVVSGDGSISAAPENGAG 261
MSEKKK A V+GLSFE AL ELESIVARLE GQVDLEESI IYERGS LKAHC+AKLK+A AKVEKIVVS DG++SA P++ AG
Sbjct: 1 MSEKKKNAPPSEVSGLSFEQALAELESIVARLEGGQVDLEESIGIYERGSLLKAHCEAKLKEAHAKVEKIVVSADGAVSAVPQDSAG 87
BLAST of mRNA_P-wetherbeei_contig13757.3.1 vs. uniprot
Match: A0A7Y8MU32_9PROT (Exodeoxyribonuclease 7 small subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8MU32_9PROT) HSP 1 Score: 103 bits (257), Expect = 3.500e-27 Identity = 53/70 (75.71%), Postives = 60/70 (85.71%), Query Frame = 1
Query: 37 VTGLSFEAALRELESIVARLESGQVDLEESISIYERGSQLKAHCDAKLKDAQAKVEKIVVSGDGSISAAP 246
+ LSFEAALRELE IV RLE GQVDLEESI+IYERG+ LKAHC+ KLKDAQA+VEKIVV DG+I+ AP
Sbjct: 12 IAALSFEAALRELEEIVTRLERGQVDLEESIAIYERGALLKAHCEKKLKDAQARVEKIVVGSDGAITTAP 81
BLAST of mRNA_P-wetherbeei_contig13757.3.1 vs. uniprot
Match: A0A351T0Y7_9PROT (Exodeoxyribonuclease 7 small subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T0Y7_9PROT) HSP 1 Score: 99.4 bits (246), Expect = 1.700e-25 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 1 MSEKKKTASLESVTGLSFEAALRELESIVARLESGQVDLEESISIYERGSQLKAHCDAKLKDAQAKVEKIVVSGDGSISAAP 246
M+ +KKTA + + LSFE AL ELE+IVARLE GQVDLEESI IYERG+ LKAHC+AKL+ AQAKV++IVV DG + P
Sbjct: 1 MAAEKKTAIPKDIAALSFEQALAELEAIVARLEGGQVDLEESIGIYERGAFLKAHCEAKLQAAQAKVDRIVVGADGGLKTEP 82
BLAST of mRNA_P-wetherbeei_contig13757.3.1 vs. uniprot
Match: A0A1F3A2J9_9PROT (Exodeoxyribonuclease 7 small subunit n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3A2J9_9PROT) HSP 1 Score: 95.5 bits (236), Expect = 4.810e-24 Identity = 47/68 (69.12%), Postives = 58/68 (85.29%), Query Frame = 1
Query: 43 GLSFEAALRELESIVARLESGQVDLEESISIYERGSQLKAHCDAKLKDAQAKVEKIVVSGDGSISAAP 246
G+SFE AL ELE+IV +LESG VDLEESI++YERG+ LKAHC+AKLK AQ ++EKIVVSGDG++ P
Sbjct: 9 GVSFEKALAELEAIVQKLESGSVDLEESIALYERGAALKAHCEAKLKAAQERIEKIVVSGDGAVKTEP 76
BLAST of mRNA_P-wetherbeei_contig13757.3.1 vs. uniprot
Match: UPI00036C5A23 (exodeoxyribonuclease VII small subunit n=1 Tax=Woodsholea maritima TaxID=240237 RepID=UPI00036C5A23) HSP 1 Score: 95.5 bits (236), Expect = 5.370e-24 Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 31 ESVTGLSFEAALRELESIVARLESGQVDLEESISIYERGSQLKAHCDAKLKDAQAKVEKIVVSGDGSISAAP 246
+ +T + FEAAL ELE IV +LESG V LEESISIYERG+ L+AHC+ KLKDAQAKVEKI++ DG IS AP
Sbjct: 7 QEITNMPFEAALAELERIVQKLESGDVALEESISIYERGAALRAHCETKLKDAQAKVEKIMLGEDGKISTAP 78
BLAST of mRNA_P-wetherbeei_contig13757.3.1 vs. uniprot
Match: A0A7C2T2Z8_9PROT (Exodeoxyribonuclease 7 small subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C2T2Z8_9PROT) HSP 1 Score: 92.4 bits (228), Expect = 8.170e-23 Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 1
Query: 46 LSFEAALRELESIVARLESGQVDLEESISIYERGSQLKAHCDAKLKDAQAKVEKIVVSGDGSISAAP 246
LSFE AL ELE IV +LESGQVDLEESI++YERG+ LKAHC+AKLK AQ ++EKIV GDG++ A P
Sbjct: 11 LSFEKALAELEQIVQKLESGQVDLEESIALYERGAALKAHCEAKLKAAQERIEKIVDLGDGTVKAEP 77
BLAST of mRNA_P-wetherbeei_contig13757.3.1 vs. uniprot
Match: A0A420WIM0_9PROT (Exodeoxyribonuclease 7 small subunit n=1 Tax=Litorimonas taeanensis TaxID=568099 RepID=A0A420WIM0_9PROT) HSP 1 Score: 91.7 bits (226), Expect = 1.520e-22 Identity = 48/67 (71.64%), Postives = 53/67 (79.10%), Query Frame = 1
Query: 46 LSFEAALRELESIVARLESGQVDLEESISIYERGSQLKAHCDAKLKDAQAKVEKIVVSGDGSISAAP 246
LSFE AL+ELE IVARLE G LEESI+IY+RG+ LKAHCDAKLKDAQ KVEKIV+ G GS P
Sbjct: 9 LSFEDALKELEDIVARLERGDAPLEESITIYQRGAALKAHCDAKLKDAQMKVEKIVLDGKGSAGTEP 75
BLAST of mRNA_P-wetherbeei_contig13757.3.1 vs. uniprot
Match: A0A5M6ZNE2_9PROT (Exodeoxyribonuclease 7 small subunit n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZNE2_9PROT) HSP 1 Score: 91.7 bits (226), Expect = 1.600e-22 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 1
Query: 37 VTGLSFEAALRELESIVARLESGQVDLEESISIYERGSQLKAHCDAKLKDAQAKVEKIVVSGDGSISAAP 246
+ LSFEAAL ELE IV +LESG+V+LE+SI++Y+RG+ LKAHC+A+LKDAQ KV+KIV+ DG SA P
Sbjct: 7 IAKLSFEAALAELEDIVHKLESGEVELEKSIALYQRGAALKAHCEARLKDAQLKVDKIVIGADGKASAEP 76
BLAST of mRNA_P-wetherbeei_contig13757.3.1 vs. uniprot
Match: A0A7Y1SL77_9PROT (Exodeoxyribonuclease 7 small subunit n=1 Tax=Hyphomonadaceae bacterium TaxID=2026748 RepID=A0A7Y1SL77_9PROT) HSP 1 Score: 91.3 bits (225), Expect = 2.280e-22 Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = 1
Query: 34 SVTGLSFEAALRELESIVARLESGQVDLEESISIYERGSQLKAHCDAKLKDAQAKVEKIVVSGDGSISAAP 246
++ +SFE AL ELESIVARLE G LEESI IYERG++LK HC++KLKDAQ KV+KIV+ DGS+S P
Sbjct: 5 AIKDMSFEDALSELESIVARLERGDAPLEESIDIYERGAKLKKHCESKLKDAQLKVDKIVLGADGSVSTEP 75
BLAST of mRNA_P-wetherbeei_contig13757.3.1 vs. uniprot
Match: A0A523FNI5_9PROT (Exodeoxyribonuclease 7 small subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523FNI5_9PROT) HSP 1 Score: 91.3 bits (225), Expect = 2.540e-22 Identity = 45/74 (60.81%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 31 ESVTGLSFEAALRELESIVARLESGQVDLEESISIYERGSQLKAHCDAKLKDAQAKVEKIVVSGDGSISAAPEN 252
E + +SFEA+L ELES+V +LESGQV LE+SI +Y RG+QLK HC+A+L DAQA++EK+V+SGD SI P N
Sbjct: 10 EDILAMSFEASLSELESVVQKLESGQVSLEDSIDMYTRGTQLKQHCEARLSDAQARIEKVVISGD-SIKTEPAN 82 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13757.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13757.3.1 >prot_P-wetherbeei_contig13757.3.1 ID=prot_P-wetherbeei_contig13757.3.1|Name=mRNA_P-wetherbeei_contig13757.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=88bp MSEKKKTASLESVTGLSFEAALRELESIVARLESGQVDLEESISIYERGSback to top mRNA from alignment at P-wetherbeei_contig13757:1361..1624+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13757.3.1 ID=mRNA_P-wetherbeei_contig13757.3.1|Name=mRNA_P-wetherbeei_contig13757.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=264bp|location=Sequence derived from alignment at P-wetherbeei_contig13757:1361..1624+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13757:1361..1624+ >mRNA_P-wetherbeei_contig13757.3.1 ID=mRNA_P-wetherbeei_contig13757.3.1|Name=mRNA_P-wetherbeei_contig13757.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=264bp|location=Sequence derived from alignment at P-wetherbeei_contig13757:1361..1624+ (Phaeothamnion wetherbeei SAG_119_79)back to top |