mRNA_P-wetherbeei_contig13756.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13756.3.1
Unique NamemRNA_P-wetherbeei_contig13756.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13756.3.1 vs. uniprot
Match: A0A537AJ46_9PROT (DUF58 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537AJ46_9PROT)

HSP 1 Score: 178 bits (452), Expect = 9.060e-53
Identity = 93/136 (68.38%), Postives = 109/136 (80.15%), Query Frame = 1
Query:   37 RLSAWFYGRRPPERGPIALGHRRVYIVPTRLGVMFGVTLVIMLVGSINYVLSLGFMLTFLLAGMALAGMVHTVRNLARMVIVTGRAEAVFAGESAQFRLFLENTAPWDRPAVMVRHEASGAQSVTDVPAAGIAEVV 444
            R++ W YG  PPERG + L HRRVYIVPT+LG +F +TL I+LVGSINY LSLGF LTFLLAGM LAGMVHT RNLARM +  GRAE VFAGE+AQFRL+L+  A +DRPA++ RH  S +Q V DVPAAG+AEVV
Sbjct:   11 RIANWIYGFTPPERGTVTLVHRRVYIVPTQLGWLFALTLAILLVGSINYALSLGFALTFLLAGMGLAGMVHTARNLARMAVSVGRAEPVFAGEAAQFRLYLDARAAFDRPAILARHLRSRSQMVLDVPAAGLAEVV 146          
BLAST of mRNA_P-wetherbeei_contig13756.3.1 vs. uniprot
Match: A0A1F4EYY6_9PROT (DUF58 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4EYY6_9PROT)

HSP 1 Score: 174 bits (440), Expect = 5.760e-51
Identity = 92/136 (67.65%), Postives = 106/136 (77.94%), Query Frame = 1
Query:   37 RLSAWFYGRRPPERGPIALGHRRVYIVPTRLGVMFGVTLVIMLVGSINYVLSLGFMLTFLLAGMALAGMVHTVRNLARMVIVTGRAEAVFAGESAQFRLFLENTAPWDRPAVMVRHEASGAQSVTDVPAAGIAEVV 444
            R + W YG  PPERG + L HRRVYIVPTRLG +F  TL+I+L+GSINY L+LGF LTFLL GMALA MVHT RNLAR+ I TGRAE VFAGESAQFRL L+  A +DRPA++ RH A GAQ V D+PA  +AEVV
Sbjct:   11 RFANWLYGFTPPERGTVVLVHRRVYIVPTRLGWLFAATLLILLIGSINYALALGFALTFLLGGMALAAMVHTARNLARIGISTGRAEPVFAGESAQFRLHLDGRARFDRPAILARHLACGAQFVVDIPAHAMAEVV 146          
BLAST of mRNA_P-wetherbeei_contig13756.3.1 vs. uniprot
Match: A0A537FMM0_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537FMM0_9PROT)

HSP 1 Score: 169 bits (427), Expect = 2.110e-50
Identity = 90/136 (66.18%), Postives = 104/136 (76.47%), Query Frame = 1
Query:   37 RLSAWFYGRRPPERGPIALGHRRVYIVPTRLGVMFGVTLVIMLVGSINYVLSLGFMLTFLLAGMALAGMVHTVRNLARMVIVTGRAEAVFAGESAQFRLFLENTAPWDRPAVMVRHEASGAQSVTDVPAAGIAEVV 444
            R +   YG  PPE G + L HRRVYIVP RLG +F  TL I+L+GSINY LSLGF LTFLLAG+ LAGMVHT RNLARM I  GRAE VFAGESAQFRL+L+    +DRPA++ RH A+G+Q V DVPA G+AEVV
Sbjct:   11 RFANRLYGFTPPEHGTVVLVHRRVYIVPARLGWLFAATLGILLIGSINYALSLGFALTFLLAGLGLAGMVHTARNLARMAISVGRAEPVFAGESAQFRLYLDGGPGFDRPAILARHLAAGSQLVVDVPAGGLAEVV 146          
BLAST of mRNA_P-wetherbeei_contig13756.3.1 vs. uniprot
Match: A0A1F4E154_9PROT (DUF58 domain-containing protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4E154_9PROT)

HSP 1 Score: 172 bits (436), Expect = 2.240e-50
Identity = 92/144 (63.89%), Postives = 108/144 (75.00%), Query Frame = 1
Query:   13 LRASPAGARLSAWFYGRRPPERGPIALGHRRVYIVPTRLGVMFGVTLVIMLVGSINYVLSLGFMLTFLLAGMALAGMVHTVRNLARMVIVTGRAEAVFAGESAQFRLFLENTAPWDRPAVMVRHEASGAQSVTDVPAAGIAEVV 444
            LRA     RL  WFYG  PPERG + L HRRVYIVPTRLG MF  TL ++L+GSINY L+LGF+L F LAG+ LAGMVHT RNLA + +  GRAE VFAGE+AQFRL+LEN A +DRPA+++RH ASGAQ V  VPA  + E V
Sbjct:    2 LRAPRPNPRLLNWFYGFTPPERGAVLLRHRRVYIVPTRLGWMFAATLGLLLLGSINYALALGFVLAFALAGIGLAGMVHTARNLALLSVSAGRAEPVFAGEAAQFRLYLENRARFDRPAILLRHLASGAQLVVHVPAGALTEAV 145          
BLAST of mRNA_P-wetherbeei_contig13756.3.1 vs. uniprot
Match: A0A536Y5U9_9PROT (DUF58 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Y5U9_9PROT)

HSP 1 Score: 170 bits (431), Expect = 1.290e-49
Identity = 88/136 (64.71%), Postives = 105/136 (77.21%), Query Frame = 1
Query:   37 RLSAWFYGRRPPERGPIALGHRRVYIVPTRLGVMFGVTLVIMLVGSINYVLSLGFMLTFLLAGMALAGMVHTVRNLARMVIVTGRAEAVFAGESAQFRLFLENTAPWDRPAVMVRHEASGAQSVTDVPAAGIAEVV 444
            R + W YG  PPERG + L HRRVYIVPT LG ++ +TL+I+L+GSINY LSLGF LTFLLAGM L GMVHT RNLARM +  GRAE +FAGE+AQFRL+LE    +DRPA++VRH  S +Q V DVP  G+AEVV
Sbjct:   11 RFANWVYGFTPPERGTVVLVHRRVYIVPTALGWLYALTLLILLIGSINYALSLGFALTFLLAGMGLVGMVHTARNLARMAVSVGRAEPLFAGETAQFRLYLEARGDFDRPAILVRHVHSRSQMVVDVPPLGLAEVV 146          
BLAST of mRNA_P-wetherbeei_contig13756.3.1 vs. uniprot
Match: A0A537DRG5_9PROT (DUF58 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537DRG5_9PROT)

HSP 1 Score: 169 bits (427), Expect = 5.160e-49
Identity = 90/136 (66.18%), Postives = 104/136 (76.47%), Query Frame = 1
Query:   37 RLSAWFYGRRPPERGPIALGHRRVYIVPTRLGVMFGVTLVIMLVGSINYVLSLGFMLTFLLAGMALAGMVHTVRNLARMVIVTGRAEAVFAGESAQFRLFLENTAPWDRPAVMVRHEASGAQSVTDVPAAGIAEVV 444
            R +   YG  PPE G + L HRRVYIVP RLG +F  TL I+L+GSINY LSLGF LTFLLAG+ LAGMVHT RNLARM I  GRAE VFAGESAQFRL+L+    +DRPA++ RH A+G+Q V DVPA G+AEVV
Sbjct:   11 RFANRLYGFTPPEHGTVVLVHRRVYIVPARLGWLFAATLGILLIGSINYALSLGFALTFLLAGLGLAGMVHTARNLARMAISVGRAEPVFAGESAQFRLYLDGGPGFDRPAILARHLAAGSQLVVDVPAGGLAEVV 146          
BLAST of mRNA_P-wetherbeei_contig13756.3.1 vs. uniprot
Match: A0A521YJJ2_9PROT (DUF58 domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YJJ2_9PROT)

HSP 1 Score: 165 bits (417), Expect = 1.630e-47
Identity = 85/136 (62.50%), Postives = 102/136 (75.00%), Query Frame = 1
Query:   37 RLSAWFYGRRPPERGPIALGHRRVYIVPTRLGVMFGVTLVIMLVGSINYVLSLGFMLTFLLAGMALAGMVHTVRNLARMVIVTGRAEAVFAGESAQFRLFLENTAPWDRPAVMVRHEASGAQSVTDVPAAGIAEVV 444
            R + W YG  PPERG + L HRRVYIVP+RLG +FG TL I+L+GSINY L+LGF LTF LAGM  A M HT RNLAR+ +  GRAE VFAGESAQ+RL L+  A +DRPA++ RH  SG+Q V D+PA G+ EVV
Sbjct:   11 RFANWLYGFTPPERGTVVLVHRRVYIVPSRLGWLFGATLGILLIGSINYALALGFALTFFLAGMGFAAMAHTARNLARIGVSVGRAEPVFAGESAQYRLHLDGRAGFDRPAILARHIGSGSQLVVDIPAHGMGEVV 146          
BLAST of mRNA_P-wetherbeei_contig13756.3.1 vs. uniprot
Match: A0A1F4B1N1_9PROT (DUF58 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B1N1_9PROT)

HSP 1 Score: 159 bits (401), Expect = 3.970e-45
Identity = 87/143 (60.84%), Postives = 102/143 (71.33%), Query Frame = 1
Query:   13 LRASPAGARLSAWFYGRRPPERGPIALGHRRVYIVPTRLGVMFGVTLVIMLVGSINYVLSLGFMLTFLLAGMALAGMVHTVRNLARMVIVTGRAEAVFAGESAQFRLFLENTAPWDRPAVMVRHEASGAQSVTDVPAAGIAEV 441
            LRA   G RL  W YG  PPE G + L HRRVYIVPTR G     T+ ++LVGSINY L LG++LTF L G+ L GMV T RNLA + +  GRA+AVFAGESAQFRLFL+N AP++RPAV+VRH ASG QSV  V A  + EV
Sbjct:    2 LRAWFRGPRLLNWLYGFVPPEHGVVLLRHRRVYIVPTRAGWYCAATVALLLVGSINYALPLGYVLTFTLVGLGLVGMVQTARNLALVSVSVGRADAVFAGESAQFRLFLDNRAPFERPAVLVRHVASGVQSVVHVTARSVTEV 144          
BLAST of mRNA_P-wetherbeei_contig13756.3.1 vs. uniprot
Match: A0A1F4BA26_9PROT (DUF58 domain-containing protein n=4 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4BA26_9PROT)

HSP 1 Score: 157 bits (396), Expect = 1.740e-44
Identity = 83/130 (63.85%), Postives = 96/130 (73.85%), Query Frame = 1
Query:   49 WFYGRRPPERGPIALGHRRVYIVPTRLGVMFGVTLVIMLVGSINYVLSLGFMLTFLLAGMALAGMVHTVRNLARMVIVTGRAEAVFAGESAQFRLFLENTAPWDRPAVMVRHEASGAQSVTDVPAAGIAE 438
            WFYG  PPERG I L  RRVYIVPTRLG MF  TL ++L+GSINY L+LGF+LTF LAG   AGMVHT RNLA + +   RAEAVFAGE AQFRL L+N AP+DRPA++ RH ASG Q V  + A   A+
Sbjct:    4 WFYGFTPPERGAILLRQRRVYIVPTRLGWMFAATLGLLLLGSINYSLALGFVLTFALAGTGFAGMVHTARNLALLTVTARRAEAVFAGERAQFRLELDNRAPFDRPAILARHVASGTQMVVHIAARSFAD 133          
BLAST of mRNA_P-wetherbeei_contig13756.3.1 vs. uniprot
Match: A0A1F4FBF3_9PROT (DUF58 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4FBF3_9PROT)

HSP 1 Score: 150 bits (378), Expect = 7.800e-42
Identity = 82/129 (63.57%), Postives = 93/129 (72.09%), Query Frame = 1
Query:   55 YGRRPPERGPIALGHRRVYIVPTRLGVMFGVTLVIMLVGSINYVLSLGFMLTFLLAGMALAGMVHTVRNLARMVIVTGRAEAVFAGESAQFRLFLENTAPWDRPAVMVRHEASGAQSVTDVPAAGIAEV 441
            +G  PPE G I L HRRVYI+PTRLG MF  TL I+L GSINY LSLGF LTF L G+ LA MVHT RNLARM + +GRAE VFAGESAQFRL L+  A +DRPA++ RH   GAQ V  + A  I EV
Sbjct:    2 WGFTPPEHGVIVLVHRRVYILPTRLGWMFAATLGILLAGSINYALSLGFALTFTLGGLGLAAMVHTARNLARMAVSSGRAEPVFAGESAQFRLHLDGRARFDRPAILARHLGCGAQLVVSIAAHAIGEV 130          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13756.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537AJ46_9PROT9.060e-5368.38DUF58 domain-containing protein n=1 Tax=Betaproteo... [more]
A0A1F4EYY6_9PROT5.760e-5167.65DUF58 domain-containing protein n=1 Tax=Betaproteo... [more]
A0A537FMM0_9PROT2.110e-5066.18Uncharacterized protein (Fragment) n=1 Tax=Betapro... [more]
A0A1F4E154_9PROT2.240e-5063.89DUF58 domain-containing protein n=2 Tax=unclassifi... [more]
A0A536Y5U9_9PROT1.290e-4964.71DUF58 domain-containing protein n=1 Tax=Betaproteo... [more]
A0A537DRG5_9PROT5.160e-4966.18DUF58 domain-containing protein n=1 Tax=Betaproteo... [more]
A0A521YJJ2_9PROT1.630e-4762.50DUF58 domain-containing protein n=1 Tax=Betaproteo... [more]
A0A1F4B1N1_9PROT3.970e-4560.84DUF58 domain-containing protein n=1 Tax=Betaproteo... [more]
A0A1F4BA26_9PROT1.740e-4463.85DUF58 domain-containing protein n=4 Tax=unclassifi... [more]
A0A1F4FBF3_9PROT7.800e-4263.57DUF58 domain-containing protein n=1 Tax=Betaproteo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13756contigP-wetherbeei_contig13756:1353..1796 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog62928.azo1093
PFAMsDUF58
Model size444
Max annot lvl206389|Rhodocyclales
Hectar predicted targeting categorysignal anchor
Exons1
Evalue1.3e-27
EggNOG OGsCOG1721@1|root,COG1721@2|Bacteria,1R3QD@1224|Proteobacteria,2VN9P@28216|Betaproteobacteria,2KW8Q@206389|Rhodocyclales
Descriptionconserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Cds size444
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185996.392135-CDS-P-wetherbeei_contig13756:1352..17961683185996.392135-CDS-P-wetherbeei_contig13756:1352..1796Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13756 1353..1796 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13756.3.1prot_P-wetherbeei_contig13756.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13756 1353..1796 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13756.3.1

>prot_P-wetherbeei_contig13756.3.1 ID=prot_P-wetherbeei_contig13756.3.1|Name=mRNA_P-wetherbeei_contig13756.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp
MLSGLRASPAGARLSAWFYGRRPPERGPIALGHRRVYIVPTRLGVMFGVT
LVIMLVGSINYVLSLGFMLTFLLAGMALAGMVHTVRNLARMVIVTGRAEA
VFAGESAQFRLFLENTAPWDRPAVMVRHEASGAQSVTDVPAAGIAEVV
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mRNA from alignment at P-wetherbeei_contig13756:1353..1796+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13756.3.1 ID=mRNA_P-wetherbeei_contig13756.3.1|Name=mRNA_P-wetherbeei_contig13756.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig13756:1353..1796+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGAGCGGGCTGCGCGCCTCGCCTGCCGGCGCGCGCCTCTCGGCGTG GTTCTACGGCCGCCGCCCGCCCGAGCGCGGCCCCATCGCCCTCGGCCACC GGCGCGTGTACATCGTGCCCACCCGCCTCGGAGTGATGTTCGGCGTGACG CTGGTCATCATGCTGGTGGGATCGATCAACTACGTGCTGTCGCTCGGCTT CATGCTGACCTTCCTGCTGGCCGGCATGGCGCTGGCGGGCATGGTCCACA CGGTGCGCAACCTCGCGCGCATGGTGATCGTGACCGGACGCGCCGAGGCG GTGTTCGCCGGCGAATCGGCGCAGTTCCGGCTGTTCCTCGAGAACACCGC CCCCTGGGACCGCCCAGCGGTGATGGTCCGCCACGAGGCCTCCGGTGCGC AGAGCGTCACCGACGTGCCGGCGGCGGGCATTGCCGAGGTGGTA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13756:1353..1796+

>mRNA_P-wetherbeei_contig13756.3.1 ID=mRNA_P-wetherbeei_contig13756.3.1|Name=mRNA_P-wetherbeei_contig13756.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig13756:1353..1796+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGAGCGGGCTGCGCGCCTCGCCTGCCGGCGCGCGCCTCTCGGCGTG
GTTCTACGGCCGCCGCCCGCCCGAGCGCGGCCCCATCGCCCTCGGCCACC
GGCGCGTGTACATCGTGCCCACCCGCCTCGGAGTGATGTTCGGCGTGACG
CTGGTCATCATGCTGGTGGGATCGATCAACTACGTGCTGTCGCTCGGCTT
CATGCTGACCTTCCTGCTGGCCGGCATGGCGCTGGCGGGCATGGTCCACA
CGGTGCGCAACCTCGCGCGCATGGTGATCGTGACCGGACGCGCCGAGGCG
GTGTTCGCCGGCGAATCGGCGCAGTTCCGGCTGTTCCTCGAGAACACCGC
CCCCTGGGACCGCCCAGCGGTGATGGTCCGCCACGAGGCCTCCGGTGCGC
AGAGCGTCACCGACGTGCCGGCGGCGGGCATTGCCGAGGTGGTA
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