mRNA_P-wetherbeei_contig1375.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1375.1.1
Unique NamemRNA_P-wetherbeei_contig1375.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1375.1.1 vs. uniprot
Match: A0A836CJX9_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX9_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 4.590e-13
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = 1
Query:    1 DVLLCADCIYEPLYGQSWRALLRTICVAAGERTLVLVSVERRTADGVNNFL 153
            D +L ADCIYEPLYG+SW+AL+  +    G  T  LV VERRTADG+N FL
Sbjct:  151 DFILSADCIYEPLYGESWKALVTALRGLCGPHTRALVCVERRTADGINGFL 201          
BLAST of mRNA_P-wetherbeei_contig1375.1.1 vs. uniprot
Match: A0A067CCX4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCX4_SAPPC)

HSP 1 Score: 67.8 bits (164), Expect = 2.560e-12
Identity = 34/54 (62.96%), Postives = 40/54 (74.07%), Query Frame = 1
Query:    1 DVLLCADCIYEPLYGQSWRALLRTICV--AAGERTLVLVSVERRTADGVNNFLA 156
            D++LC DCIYEPLYGQSWRAL  ++ V  AA     VLVSVERR  DG++ FLA
Sbjct:  145 DLVLCCDCIYEPLYGQSWRALALSMDVLCAANPACRVLVSVERRHGDGIDAFLA 198          
BLAST of mRNA_P-wetherbeei_contig1375.1.1 vs. uniprot
Match: A0A7S3Y709_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y709_HETAK)

HSP 1 Score: 65.5 bits (158), Expect = 7.980e-12
Identity = 31/54 (57.41%), Postives = 39/54 (72.22%), Query Frame = 1
Query:    1 DVLLCADCIYEPLYGQSWRALLRTICVAAGERTL--VLVSVERRTADGVNNFLA 156
            D L+C DC+YEPLYG SW+AL+  +   A +RTL  VL + ERRTADG+  FLA
Sbjct:   77 DFLICCDCVYEPLYGDSWKALVHVVANIA-DRTLTKVLFTFERRTADGIEKFLA 129          
BLAST of mRNA_P-wetherbeei_contig1375.1.1 vs. uniprot
Match: A0A0P1B6G4_PLAHL (Putative N2,N2-dimethylguanosine tRNA methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B6G4_PLAHL)

HSP 1 Score: 65.5 bits (158), Expect = 2.070e-11
Identity = 32/54 (59.26%), Postives = 41/54 (75.93%), Query Frame = 1
Query:    1 DVLLCADCIYEPLYGQSWRALLRT---ICVAAGERTLVLVSVERRTADGVNNFL 153
            DV+L  DCIYEPLYG+SW+AL +T   +C+A    T+VL++VERR  DGV NFL
Sbjct:  163 DVVLSCDCIYEPLYGKSWQALAQTMEMLCLA-NHATVVLMAVERRNKDGVENFL 215          
BLAST of mRNA_P-wetherbeei_contig1375.1.1 vs. uniprot
Match: A0A7S0A0A7_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0A7_9DINO)

HSP 1 Score: 62.4 bits (150), Expect = 2.230e-11
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 1
Query:    1 DVLLCADCIYEPLYGQSWRALLRTICVAAGERTLVLVSVERRT-ADGVNNFL 153
            D++LC DC++EPLYGQSW +L + I V  G  T VL+SV+RR+  DGV  FL
Sbjct:   17 DLVLCCDCVFEPLYGQSWVSLAQCIEVFCGPNTTVLLSVQRRSDKDGVEGFL 68          
BLAST of mRNA_P-wetherbeei_contig1375.1.1 vs. uniprot
Match: A0A1V9YH22_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH22_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 2.490e-11
Identity = 32/54 (59.26%), Postives = 37/54 (68.52%), Query Frame = 1
Query:    1 DVLLCADCIYEPLYGQSWRALLRTI--CVAAGERTLVLVSVERRTADGVNNFLA 156
            DVLL  DC+YEPLYG+SWRAL  T+    AA      LVSVERR  DG++ FLA
Sbjct:  147 DVLLSCDCVYEPLYGESWRALAHTMDELCAANPACRALVSVERRHGDGIDRFLA 200          
BLAST of mRNA_P-wetherbeei_contig1375.1.1 vs. uniprot
Match: M4B7G5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B7G5_HYAAE)

HSP 1 Score: 64.7 bits (156), Expect = 4.760e-11
Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 1
Query:    1 DVLLCADCIYEPLYGQSWRALLRT--ICVAAGERTLVLVSVERRTADGVNNFL 153
            DV+L  DCIYEPLYG SWRAL +T  +   A    +VLV VERR  DGV+NFL
Sbjct:  185 DVVLSCDCIYEPLYGTSWRALAQTMELLCEANPECVVLVCVERRNQDGVDNFL 237          
BLAST of mRNA_P-wetherbeei_contig1375.1.1 vs. uniprot
Match: A0A0G4ERN5_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ERN5_VITBC)

HSP 1 Score: 64.3 bits (155), Expect = 8.390e-11
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 1
Query:    1 DVLLCADCIYEPLYGQSWRALLRTICVAAGERTLVLVSVERRTADGVNNFLA 156
            D++L  DC+YEPLYG SWR L   I   AG  T V ++VERR  DGV+NF+A
Sbjct:  204 DMILSCDCVYEPLYGDSWRDLSEAIDELAGPLTEVWIAVERRNNDGVDNFIA 255          
BLAST of mRNA_P-wetherbeei_contig1375.1.1 vs. uniprot
Match: A0A6A3UNC4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UNC4_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.160e-10
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 1
Query:    1 DVLLCADCIYEPLYGQSWRALLRT--ICVAAGERTLVLVSVERRTADGVNNFLA 156
            DV+L  DCIYEPLYG SWRAL +T  +   A  + +VL+ VERR  DG++ FLA
Sbjct:  171 DVVLSCDCIYEPLYGTSWRALAQTMELLCQANPKCVVLMGVERRNQDGIDKFLA 224          
BLAST of mRNA_P-wetherbeei_contig1375.1.1 vs. uniprot
Match: A0A7S3H2N5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H2N5_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.400e-10
Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 1
Query:    1 DVLLCADCIYEPLYGQSWRALLRTICVAAGERTLVLVSVERRTADGVNNFL 153
            D++LC+DC+ EPLYGQSW  L     V  G RT VL S++RR  DG + FL
Sbjct:   25 DIILCSDCVNEPLYGQSWVELADCFEVLCGPRTSVLFSLQRRLEDGFDGFL 75          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1375.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJX9_9STRA4.590e-1360.78Putative methyltransferase-domain-containing prote... [more]
A0A067CCX4_SAPPC2.560e-1262.96Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S3Y709_HETAK7.980e-1257.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0P1B6G4_PLAHL2.070e-1159.26Putative N2,N2-dimethylguanosine tRNA methyltransf... [more]
A0A7S0A0A7_9DINO2.230e-1155.77Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
A0A1V9YH22_9STRA2.490e-1159.26Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
M4B7G5_HYAAE4.760e-1160.38Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A0G4ERN5_VITBC8.390e-1155.77Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A6A3UNC4_9STRA1.160e-1055.56Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A7S3H2N5_9STRA1.400e-1052.94Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1375contigP-wetherbeei_contig1375:106..261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008620151.1
PFAMsMethyltransf_16
Model size156
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue4.15e-13
EggNOG OGsKOG2793@1|root,KOG2793@2759|Eukaryota
Descriptionlysine N-methyltransferase activity
Cds size156
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185995.9805727-CDS-P-wetherbeei_contig1375:105..2611683185995.9805727-CDS-P-wetherbeei_contig1375:105..261Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1375 106..261 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1375.1.1prot_P-wetherbeei_contig1375.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1375 106..261 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1375.1.1

>prot_P-wetherbeei_contig1375.1.1 ID=prot_P-wetherbeei_contig1375.1.1|Name=mRNA_P-wetherbeei_contig1375.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=52bp
DVLLCADCIYEPLYGQSWRALLRTICVAAGERTLVLVSVERRTADGVNNF
LA
back to top

mRNA from alignment at P-wetherbeei_contig1375:106..261+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1375.1.1 ID=mRNA_P-wetherbeei_contig1375.1.1|Name=mRNA_P-wetherbeei_contig1375.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=156bp|location=Sequence derived from alignment at P-wetherbeei_contig1375:106..261+ (Phaeothamnion wetherbeei SAG_119_79)
GACGTGTTGCTCTGCGCCGACTGCATCTACGAGCCGCTCTACGGGCAGTC GTGGCGCGCGCTGCTGAGGACTATTTGCGTGGCGGCCGGCGAGCGGACAC TGGTCCTCGTGTCGGTTGAACGGCGTACCGCGGACGGCGTCAACAACTTC TTGGCT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1375:106..261+

>mRNA_P-wetherbeei_contig1375.1.1 ID=mRNA_P-wetherbeei_contig1375.1.1|Name=mRNA_P-wetherbeei_contig1375.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=156bp|location=Sequence derived from alignment at P-wetherbeei_contig1375:106..261+ (Phaeothamnion wetherbeei SAG_119_79)
GACGTGTTGCTCTGCGCCGACTGCATCTACGAGCCGCTCTACGGGCAGTC
GTGGCGCGCGCTGCTGAGGACTATTTGCGTGGCGGCCGGCGAGCGGACAC
TGGTCCTCGTGTCGGTTGAACGGCGTACCGCGGACGGCGTCAACAACTTC
TTGGCT
back to top