mRNA_P-wetherbeei_contig13742.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13742.1.1
Unique NamemRNA_P-wetherbeei_contig13742.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13742.1.1 vs. uniprot
Match: A0A3A5KWE3_9HYPH (Stf0 sulfotransferase n=1 Tax=Mesorhizobium waimense TaxID=1300307 RepID=A0A3A5KWE3_9HYPH)

HSP 1 Score: 413 bits (1062), Expect = 2.160e-144
Identity = 197/248 (79.44%), Postives = 221/248 (89.11%), Query Frame = 1
Query:    7 MFDGYIICGTPRTGSTLLCNLLASTKRAGNPDSFYGRKFMPAWAEEWRLPGRDTMSERDFNIAYLNAAVAAGKGETGIFGLRLMRENLDELSADLDRVFPQLPSDKARLEKAFGRVLYIHLSRQDKLAQAISLVKAEQTGLWHIAPDGTEIERLAPPEEPQYDFARIHREVLELESYERAWNSWFGAQDIEPLRIGYEALSANPAAVLIGICEALGIQPPNARDIKPGVAKLADETSLDWTRRYRSDA 750
            MFDGYIICGTPRTGSTLLCNLLAST+ AGNP SFY R+ + AWAE+W+LPGRDTMSE +FN AYL+AA+AAGK  TGIFGLRLMRENLDELSA LD++FPQLPSDKAR E+AFG +LYIHLSR++KLAQAISLVKAEQTGLWHIAPDGTEIER+APP+EPQYDF RI R V ELE+Y+ AWN+WF  Q + PLR GYE LSA+PAA L+GICEALGIQPPNA  ++PGVAKLADETSLDW RRYRSDA
Sbjct:   16 MFDGYIICGTPRTGSTLLCNLLASTRTAGNPHSFYRRQDISAWAEDWKLPGRDTMSELEFNAAYLDAAIAAGKDGTGIFGLRLMRENLDELSAILDQIFPQLPSDKARFERAFGHILYIHLSRENKLAQAISLVKAEQTGLWHIAPDGTEIERVAPPKEPQYDFERIKRAVAELEAYDAAWNTWFAEQGVGPLRQGYERLSADPAATLLGICEALGIQPPNAEGVRPGVAKLADETSLDWMRRYRSDA 263          
BLAST of mRNA_P-wetherbeei_contig13742.1.1 vs. uniprot
Match: A0A434UJJ2_9HYPH (Stf0 sulfotransferase n=4 Tax=Phyllobacteriaceae TaxID=69277 RepID=A0A434UJJ2_9HYPH)

HSP 1 Score: 413 bits (1061), Expect = 3.810e-144
Identity = 195/250 (78.00%), Postives = 222/250 (88.80%), Query Frame = 1
Query:    1 HRMFDGYIICGTPRTGSTLLCNLLASTKRAGNPDSFYGRKFMPAWAEEWRLPGRDTMSERDFNIAYLNAAVAAGKGETGIFGLRLMRENLDELSADLDRVFPQLPSDKARLEKAFGRVLYIHLSRQDKLAQAISLVKAEQTGLWHIAPDGTEIERLAPPEEPQYDFARIHREVLELESYERAWNSWFGAQDIEPLRIGYEALSANPAAVLIGICEALGIQPPNARDIKPGVAKLADETSLDWTRRYRSDA 750
            H MFDGYIICGTPRTGSTLLC LLASTK AG+P SFY R+ +  WAEEW+LP RDTMSE DFN+AYLNAA+AAGKG TG+FGLRLMRENLDELSA LDR+FP+LPSD+ARLEKAFGR+LYIHLSR+DKLAQA+SLVKAEQTGLWHIAPDGTEIER+APP+EPQYDF RI REV ELE+Y+ AWN WF AQDI PLR+ YE L+ANPAA L+ IC+ALGI+ P+A+D+ PGVAKL+D+TSLDW RRY  DA
Sbjct:   20 HNMFDGYIICGTPRTGSTLLCKLLASTKTAGDPHSFYRRQDVLEWAEEWQLPDRDTMSELDFNVAYLNAAIAAGKGGTGLFGLRLMRENLDELSAILDRIFPKLPSDRARLEKAFGRILYIHLSREDKLAQAVSLVKAEQTGLWHIAPDGTEIERVAPPKEPQYDFERIRREVAELETYDAAWNIWFAAQDIFPLRVDYERLAANPAATLLDICKALGIRAPDAKDVSPGVAKLSDDTSLDWMRRYHLDA 269          
BLAST of mRNA_P-wetherbeei_contig13742.1.1 vs. uniprot
Match: A0A527E023_9HYPH (Stf0 sulfotransferase n=4 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A527E023_9HYPH)

HSP 1 Score: 404 bits (1038), Expect = 6.610e-141
Identity = 190/250 (76.00%), Postives = 216/250 (86.40%), Query Frame = 1
Query:    1 HRMFDGYIICGTPRTGSTLLCNLLASTKRAGNPDSFYGRKFMPAWAEEWRLPGRDTMSERDFNIAYLNAAVAAGKGETGIFGLRLMRENLDELSADLDRVFPQLPSDKARLEKAFGRVLYIHLSRQDKLAQAISLVKAEQTGLWHIAPDGTEIERLAPPEEPQYDFARIHREVLELESYERAWNSWFGAQDIEPLRIGYEALSANPAAVLIGICEALGIQPPNARDIKPGVAKLADETSLDWTRRYRSDA 750
              MFDGYIICGTPRTGSTLLC LLASTK AG+P SFY ++ +  WAEEW LP RDTM E +FN+AYLNAA+AAGKG TGIFGLRLM ENLDELSA LDR+FPQLPSD+ARLEKAFG +LYIHLSR+DKLAQA+SL+KAEQTGLWHIAPDGTEIER+APP+EPQYDF RI REV ELE+Y+ AWN WF  Q I PLR+GYE LS+NPA  L+GICEALG+Q P+A D++ GVAKL+D+TSLDW RRYR DA
Sbjct:    3 RNMFDGYIICGTPRTGSTLLCKLLASTKTAGDPHSFYRQQDVWEWAEEWNLPDRDTMGELEFNVAYLNAAIAAGKGGTGIFGLRLMHENLDELSAILDRIFPQLPSDRARLEKAFGHILYIHLSREDKLAQAVSLIKAEQTGLWHIAPDGTEIERVAPPKEPQYDFERIQREVTELEAYDAAWNIWFAEQGITPLRVGYERLSSNPATTLLGICEALGVQAPDAEDVRLGVAKLSDDTSLDWVRRYRRDA 252          
BLAST of mRNA_P-wetherbeei_contig13742.1.1 vs. uniprot
Match: A0A0Q6NTD9_9HYPH (Stf0 sulfotransferase n=5 Tax=Mesorhizobium TaxID=68287 RepID=A0A0Q6NTD9_9HYPH)

HSP 1 Score: 402 bits (1033), Expect = 3.310e-140
Identity = 188/248 (75.81%), Postives = 216/248 (87.10%), Query Frame = 1
Query:    7 MFDGYIICGTPRTGSTLLCNLLASTKRAGNPDSFYGRKFMPAWAEEWRLPGRDTMSERDFNIAYLNAAVAAGKGETGIFGLRLMRENLDELSADLDRVFPQLPSDKARLEKAFGRVLYIHLSRQDKLAQAISLVKAEQTGLWHIAPDGTEIERLAPPEEPQYDFARIHREVLELESYERAWNSWFGAQDIEPLRIGYEALSANPAAVLIGICEALGIQPPNARDIKPGVAKLADETSLDWTRRYRSDA 750
            MFDGYI+CGTPRTGSTLLC LL STK AG P SFY R+ +  WAEEW+LP RDTMSE DFN+AYLNAA+AAGKG TG+FGLRLMRENLDELSA LD++FP+LPSD+ARLEKAFGR++YIHLSR+DKLAQA+SL+KAEQTGLWHIAPDGTEIER APP+ PQYDF RI REV ELE+Y+ AWN WF  Q I PLR+GYE L+ANPAA L+GICEALG++ P+A D+ PGVAKL+D+TSLDW RRY  DA
Sbjct:    1 MFDGYIVCGTPRTGSTLLCKLLESTKTAGTPHSFYRRQDVSEWAEEWKLPDRDTMSELDFNVAYLNAAIAAGKGGTGLFGLRLMRENLDELSAILDQIFPELPSDRARLEKAFGRIVYIHLSREDKLAQAVSLIKAEQTGLWHIAPDGTEIERAAPPKAPQYDFKRIRREVTELETYDAAWNIWFTEQGISPLRVGYERLAANPAATLLGICEALGVRAPDAGDVSPGVAKLSDDTSLDWMRRYLLDA 248          
BLAST of mRNA_P-wetherbeei_contig13742.1.1 vs. uniprot
Match: E8T7C1_MESCW (Sulphotransf domain-containing protein n=42 Tax=Mesorhizobium TaxID=68287 RepID=E8T7C1_MESCW)

HSP 1 Score: 400 bits (1028), Expect = 4.040e-139
Identity = 188/250 (75.20%), Postives = 216/250 (86.40%), Query Frame = 1
Query:    1 HRMFDGYIICGTPRTGSTLLCNLLASTKRAGNPDSFYGRKFMPAWAEEWRLPGRDTMSERDFNIAYLNAAVAAGKGETGIFGLRLMRENLDELSADLDRVFPQLPSDKARLEKAFGRVLYIHLSRQDKLAQAISLVKAEQTGLWHIAPDGTEIERLAPPEEPQYDFARIHREVLELESYERAWNSWFGAQDIEPLRIGYEALSANPAAVLIGICEALGIQPPNARDIKPGVAKLADETSLDWTRRYRSDA 750
            H MFDGYIICGTPRTGSTLLC LLASTK AG+P SFY R+ +  WAEEW+LP R  MSE +F+ AYL+AA+AAGKG TG+FGLRLMRENLDELSA LDR+FP+ PSD+AR E+AFG VLYIHLSR+DKLAQA+SL+KAEQTGLWHIAPDGTEIER+APP+EPQYDF RI REV ELE+Y+ AWN WF AQ I P R+GYE LS+NPAA L+GICE LG+Q PNA D++PGVAKL+D+TSLDW RRYR DA
Sbjct:   20 HNMFDGYIICGTPRTGSTLLCKLLASTKTAGDPHSFYRRQDVVEWAEEWKLPDRAAMSELEFDAAYLDAAIAAGKGGTGLFGLRLMRENLDELSAILDRIFPKRPSDRARFERAFGNVLYIHLSREDKLAQAVSLIKAEQTGLWHIAPDGTEIERVAPPKEPQYDFERIRREVAELETYDAAWNIWFAAQGISPHRVGYERLSSNPAATLLGICEVLGVQAPNADDVRPGVAKLSDDTSLDWMRRYRLDA 269          
BLAST of mRNA_P-wetherbeei_contig13742.1.1 vs. uniprot
Match: X6H265_9HYPH (Stf0 sulfotransferase n=24 Tax=Phyllobacteriaceae TaxID=69277 RepID=X6H265_9HYPH)

HSP 1 Score: 399 bits (1025), Expect = 5.670e-139
Identity = 188/248 (75.81%), Postives = 213/248 (85.89%), Query Frame = 1
Query:    7 MFDGYIICGTPRTGSTLLCNLLASTKRAGNPDSFYGRKFMPAWAEEWRLPGRDTMSERDFNIAYLNAAVAAGKGETGIFGLRLMRENLDELSADLDRVFPQLPSDKARLEKAFGRVLYIHLSRQDKLAQAISLVKAEQTGLWHIAPDGTEIERLAPPEEPQYDFARIHREVLELESYERAWNSWFGAQDIEPLRIGYEALSANPAAVLIGICEALGIQPPNARDIKPGVAKLADETSLDWTRRYRSDA 750
            MFDGYIICGTPRTGSTLLC LLASTK  G+P SFY R+ +  WAEEW+LP RDTMSE DFN+AYLNAA+AAGKG TG+FGLRLMRENLDELS  LDR+FP+LPSD+AR E+AFG VLYIHLSR+DKLAQA+SL+KAEQTGLWHIAPDGTEIER+APP+EPQYDF RI REV ELE+Y+ AWN WF  Q I PLR+GYE LS NPAA L+GICEAL ++ P+  D+ PGVAKLAD TSLDW RRYR +A
Sbjct:    1 MFDGYIICGTPRTGSTLLCKLLASTKTTGDPHSFYRRQDVLEWAEEWKLPDRDTMSELDFNVAYLNAAIAAGKGGTGLFGLRLMRENLDELSTILDRIFPKLPSDRARFERAFGNVLYIHLSREDKLAQAVSLIKAEQTGLWHIAPDGTEIERVAPPKEPQYDFERIKREVTELETYDAAWNIWFAEQGISPLRVGYERLSGNPAATLLGICEALRVRAPDEEDVSPGVAKLADATSLDWMRRYRLEA 248          
BLAST of mRNA_P-wetherbeei_contig13742.1.1 vs. uniprot
Match: UPI0017857D7E (Stf0 family sulphotransferase n=1 Tax=Mesorhizobium amorphae TaxID=71433 RepID=UPI0017857D7E)

HSP 1 Score: 397 bits (1019), Expect = 4.330e-138
Identity = 188/248 (75.81%), Postives = 218/248 (87.90%), Query Frame = 1
Query:    7 MFDGYIICGTPRTGSTLLCNLLASTKRAGNPDSFYGRKFMPAWAEEWRLPGRDTMSERDFNIAYLNAAVAAGKGETGIFGLRLMRENLDELSADLDRVFPQLPSDKARLEKAFGRVLYIHLSRQDKLAQAISLVKAEQTGLWHIAPDGTEIERLAPPEEPQYDFARIHREVLELESYERAWNSWFGAQDIEPLRIGYEALSANPAAVLIGICEALGIQPPNARDIKPGVAKLADETSLDWTRRYRSDA 750
            MFDGYIICGTPRTGSTLLCNLLASTK AG+P SFY R+ +  WAE+W+LP RDTMSE +FN+AYL+AA+ AGKG TGIFGLRLMRENLDELSA LD++F +LPSDKAR E+AFGR+LYIHLSR++KLAQAISLVKAEQTGLWHIAPDGTEIER+APP+EP+YDF RI +EV +LE+Y+ AWN WF  Q+I PLR+GYE LS+NPAA L  IC+ALGIQPPNA D++PGVAK +DETSLDW RRY  DA
Sbjct:    1 MFDGYIICGTPRTGSTLLCNLLASTKTAGDPHSFYRRQNVSEWAEDWKLPNRDTMSELEFNVAYLDAAITAGKGGTGIFGLRLMRENLDELSAILDQIFSKLPSDKARFERAFGRILYIHLSRENKLAQAISLVKAEQTGLWHIAPDGTEIERIAPPKEPRYDFERIKQEVSKLEAYDAAWNMWFAEQEINPLRVGYERLSSNPAATLASICKALGIQPPNA-DVRPGVAKFSDETSLDWMRRYHLDA 247          
BLAST of mRNA_P-wetherbeei_contig13742.1.1 vs. uniprot
Match: UPI000518037C (Stf0 family sulphotransferase n=1 Tax=Mesorhizobium ciceri TaxID=39645 RepID=UPI000518037C)

HSP 1 Score: 394 bits (1012), Expect = 5.230e-137
Identity = 187/248 (75.40%), Postives = 213/248 (85.89%), Query Frame = 1
Query:    7 MFDGYIICGTPRTGSTLLCNLLASTKRAGNPDSFYGRKFMPAWAEEWRLPGRDTMSERDFNIAYLNAAVAAGKGETGIFGLRLMRENLDELSADLDRVFPQLPSDKARLEKAFGRVLYIHLSRQDKLAQAISLVKAEQTGLWHIAPDGTEIERLAPPEEPQYDFARIHREVLELESYERAWNSWFGAQDIEPLRIGYEALSANPAAVLIGICEALGIQPPNARDIKPGVAKLADETSLDWTRRYRSDA 750
            MFDGYIICGTPRTGSTLLC LLASTK AG+P SFY R+ +  WAEEW L  RD MSE +FN+AYLNAA+ AGKG TGIFGLRLMRENLDELSA LDR+FP+  SD+ARLEKAFGR+LYIHLSR+DKL+QA+SL+KAEQTGLWHIAPDGTEIER+AP +EPQYDF RI REV ELE+Y+  WN WF AQ I PLR+GYE L+ANPAA L+GICEALG+Q P+A +++PGVAKLAD TSLDW RRY  DA
Sbjct:    1 MFDGYIICGTPRTGSTLLCKLLASTKTAGDPHSFYRRQDVAEWAEEWNLADRDAMSELEFNVAYLNAAITAGKGGTGIFGLRLMRENLDELSAILDRIFPKFASDRARLEKAFGRILYIHLSREDKLSQAVSLIKAEQTGLWHIAPDGTEIERVAPAKEPQYDFERIRREVTELENYDAVWNIWFEAQGIIPLRVGYERLAANPAATLLGICEALGVQAPDADEVRPGVAKLADATSLDWMRRYHLDA 248          
BLAST of mRNA_P-wetherbeei_contig13742.1.1 vs. uniprot
Match: A0A841PBM6_9HYPH (LPS sulfotransferase NodH n=1 Tax=Mesorhizobium sangaii TaxID=505389 RepID=A0A841PBM6_9HYPH)

HSP 1 Score: 394 bits (1011), Expect = 7.420e-137
Identity = 189/248 (76.21%), Postives = 212/248 (85.48%), Query Frame = 1
Query:    7 MFDGYIICGTPRTGSTLLCNLLASTKRAGNPDSFYGRKFMPAWAEEWRLPGRDTMSERDFNIAYLNAAVAAGKGETGIFGLRLMRENLDELSADLDRVFPQLPSDKARLEKAFGRVLYIHLSRQDKLAQAISLVKAEQTGLWHIAPDGTEIERLAPPEEPQYDFARIHREVLELESYERAWNSWFGAQDIEPLRIGYEALSANPAAVLIGICEALGIQPPNARDIKPGVAKLADETSLDWTRRYRSDA 750
            MFDGYIICGTPRTGSTLLC LLASTK AGNP SFY R+ +  WAEEW LP RDTM + DFN AYL AA+A G+G TGIFGLRLMRENLDELSA LD+VFP+LPSD+AR EKAFG VLY+HLSR++KLAQA+SLVKAEQTGLWHIAPDGTEIER+AP +EPQYDF R+ REV ELE+Y+ AWN WF  Q I PLR+GYE L+ANPAA L+ ICEALG+Q PNA +I+PGVAKLADETSLDW RRY  DA
Sbjct:    1 MFDGYIICGTPRTGSTLLCKLLASTKTAGNPHSFYRRQDVSEWAEEWGLPHRDTMGDLDFNAAYLKAAIANGRGGTGIFGLRLMRENLDELSAILDQVFPKLPSDRARFEKAFGHVLYMHLSRENKLAQAVSLVKAEQTGLWHIAPDGTEIERVAPAKEPQYDFERLRREVTELEAYDAAWNLWFAKQGIIPLRVGYERLAANPAATLLDICEALGVQAPNADEIRPGVAKLADETSLDWMRRYHMDA 248          
BLAST of mRNA_P-wetherbeei_contig13742.1.1 vs. uniprot
Match: A0A7R6XAD5_9HYPH (Sulphotransf domain-containing protein n=7 Tax=Mesorhizobium TaxID=68287 RepID=A0A7R6XAD5_9HYPH)

HSP 1 Score: 393 bits (1010), Expect = 1.170e-136
Identity = 188/248 (75.81%), Postives = 214/248 (86.29%), Query Frame = 1
Query:    7 MFDGYIICGTPRTGSTLLCNLLASTKRAGNPDSFYGRKFMPAWAEEWRLPGRDTMSERDFNIAYLNAAVAAGKGETGIFGLRLMRENLDELSADLDRVFPQLPSDKARLEKAFGRVLYIHLSRQDKLAQAISLVKAEQTGLWHIAPDGTEIERLAPPEEPQYDFARIHREVLELESYERAWNSWFGAQDIEPLRIGYEALSANPAAVLIGICEALGIQPPNARDIKPGVAKLADETSLDWTRRYRSDA 750
            MFD YIICGTPRTGSTLLC LLAST  +G+P SFY R+ +P WAEEW+LP RDTM E +F++AYL+AA+ AGKG T IFGLRLMRENLDELSA LDR+FP L SD AR E+AFGR+LYIHLSR++KLAQAISL+KA+QTGLWHIAPDGTEIER+AP +EPQYDF RI  E+ ELESY+ AWN WF AQ I PLR+GYE LSA+PAA L+GICEALG+QPPNA DI+PGVAKLADETSLDW RRYR DA
Sbjct:    1 MFDAYIICGTPRTGSTLLCKLLASTGTSGDPHSFYRRQDVPEWAEEWKLPARDTMGELEFDVAYLDAAITAGKGGTEIFGLRLMRENLDELSAILDRIFPGLASDTARFERAFGRILYIHLSRENKLAQAISLIKAQQTGLWHIAPDGTEIERVAPAQEPQYDFERIKGELAELESYDAAWNIWFTAQGITPLRVGYEHLSADPAAALLGICEALGVQPPNADDIRPGVAKLADETSLDWMRRYRLDA 248          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13742.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3A5KWE3_9HYPH2.160e-14479.44Stf0 sulfotransferase n=1 Tax=Mesorhizobium waimen... [more]
A0A434UJJ2_9HYPH3.810e-14478.00Stf0 sulfotransferase n=4 Tax=Phyllobacteriaceae T... [more]
A0A527E023_9HYPH6.610e-14176.00Stf0 sulfotransferase n=4 Tax=Mesorhizobium sp. Ta... [more]
A0A0Q6NTD9_9HYPH3.310e-14075.81Stf0 sulfotransferase n=5 Tax=Mesorhizobium TaxID=... [more]
E8T7C1_MESCW4.040e-13975.20Sulphotransf domain-containing protein n=42 Tax=Me... [more]
X6H265_9HYPH5.670e-13975.81Stf0 sulfotransferase n=24 Tax=Phyllobacteriaceae ... [more]
UPI0017857D7E4.330e-13875.81Stf0 family sulphotransferase n=1 Tax=Mesorhizobiu... [more]
UPI000518037C5.230e-13775.40Stf0 family sulphotransferase n=1 Tax=Mesorhizobiu... [more]
A0A841PBM6_9HYPH7.420e-13776.21LPS sulfotransferase NodH n=1 Tax=Mesorhizobium sa... [more]
A0A7R6XAD5_9HYPH1.170e-13675.81Sulphotransf domain-containing protein n=7 Tax=Mes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13742contigP-wetherbeei_contig13742:463..1212 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1287116.X734_13420
PFAMsSulphotransf
Model size750
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K21014
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.05e-140
EggNOG OGsCOG4424@1|root,COG4424@2|Bacteria,1RBDG@1224|Proteobacteria,2U6M2@28211|Alphaproteobacteria
EC2.8.2.37
DescriptionStf0 sulphotransferase
Cds size744
COG categoryS
BRITEko00000,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185995.911585-UTR-P-wetherbeei_contig13742:462..4681683185995.911585-UTR-P-wetherbeei_contig13742:462..468Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13742 463..468 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185995.9253392-CDS-P-wetherbeei_contig13742:468..12121683185995.9253392-CDS-P-wetherbeei_contig13742:468..1212Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13742 469..1212 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13742.1.1prot_P-wetherbeei_contig13742.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13742 469..1212 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13742.1.1

>prot_P-wetherbeei_contig13742.1.1 ID=prot_P-wetherbeei_contig13742.1.1|Name=mRNA_P-wetherbeei_contig13742.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp
MFDGYIICGTPRTGSTLLCNLLASTKRAGNPDSFYGRKFMPAWAEEWRLP
GRDTMSERDFNIAYLNAAVAAGKGETGIFGLRLMRENLDELSADLDRVFP
QLPSDKARLEKAFGRVLYIHLSRQDKLAQAISLVKAEQTGLWHIAPDGTE
IERLAPPEEPQYDFARIHREVLELESYERAWNSWFGAQDIEPLRIGYEAL
SANPAAVLIGICEALGIQPPNARDIKPGVAKLADETSLDWTRRYRSDA
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mRNA from alignment at P-wetherbeei_contig13742:463..1212+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13742.1.1 ID=mRNA_P-wetherbeei_contig13742.1.1|Name=mRNA_P-wetherbeei_contig13742.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=750bp|location=Sequence derived from alignment at P-wetherbeei_contig13742:463..1212+ (Phaeothamnion wetherbeei SAG_119_79)
CATCGCATGTTTGACGGCTACATCATCTGCGGCACGCCGCGGACTGGAAG CACCCTGCTCTGCAATCTTCTGGCGTCAACGAAAAGAGCCGGCAATCCGG ACTCTTTCTATGGACGCAAGTTCATGCCTGCGTGGGCCGAGGAATGGCGC CTGCCAGGCCGCGACACGATGAGCGAAAGGGATTTCAACATTGCCTATCT GAATGCGGCGGTGGCGGCGGGAAAGGGTGAAACCGGGATTTTTGGCCTCC GCTTGATGCGGGAAAATCTGGATGAGCTTTCCGCAGACCTTGACCGGGTG TTTCCGCAACTTCCGTCGGACAAGGCGCGCTTGGAAAAGGCCTTTGGCCG CGTCCTCTACATTCACCTGTCCCGCCAAGACAAGCTTGCACAGGCTATTT CCCTGGTTAAGGCAGAACAAACCGGCCTTTGGCATATCGCGCCGGACGGA ACAGAGATCGAGCGGCTCGCGCCGCCGGAAGAACCGCAATATGACTTCGC GCGGATCCATCGTGAAGTTTTGGAACTGGAGAGCTACGAGAGGGCTTGGA ATTCCTGGTTCGGTGCGCAAGACATTGAACCGCTGCGCATCGGCTACGAG GCCCTTTCAGCCAATCCCGCAGCGGTATTGATCGGCATCTGCGAAGCCCT GGGAATTCAACCGCCAAATGCCCGCGATATAAAGCCCGGTGTTGCCAAGC TCGCGGATGAGACAAGTCTGGATTGGACACGCCGCTACCGTTCAGATGCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13742:463..1212+

>mRNA_P-wetherbeei_contig13742.1.1 ID=mRNA_P-wetherbeei_contig13742.1.1|Name=mRNA_P-wetherbeei_contig13742.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig13742:463..1212+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTTTGACGGCTACATCATCTGCGGCACGCCGCGGACTGGAAGCACCCT
GCTCTGCAATCTTCTGGCGTCAACGAAAAGAGCCGGCAATCCGGACTCTT
TCTATGGACGCAAGTTCATGCCTGCGTGGGCCGAGGAATGGCGCCTGCCA
GGCCGCGACACGATGAGCGAAAGGGATTTCAACATTGCCTATCTGAATGC
GGCGGTGGCGGCGGGAAAGGGTGAAACCGGGATTTTTGGCCTCCGCTTGA
TGCGGGAAAATCTGGATGAGCTTTCCGCAGACCTTGACCGGGTGTTTCCG
CAACTTCCGTCGGACAAGGCGCGCTTGGAAAAGGCCTTTGGCCGCGTCCT
CTACATTCACCTGTCCCGCCAAGACAAGCTTGCACAGGCTATTTCCCTGG
TTAAGGCAGAACAAACCGGCCTTTGGCATATCGCGCCGGACGGAACAGAG
ATCGAGCGGCTCGCGCCGCCGGAAGAACCGCAATATGACTTCGCGCGGAT
CCATCGTGAAGTTTTGGAACTGGAGAGCTACGAGAGGGCTTGGAATTCCT
GGTTCGGTGCGCAAGACATTGAACCGCTGCGCATCGGCTACGAGGCCCTT
TCAGCCAATCCCGCAGCGGTATTGATCGGCATCTGCGAAGCCCTGGGAAT
TCAACCGCCAAATGCCCGCGATATAAAGCCCGGTGTTGCCAAGCTCGCGG
ATGAGACAAGTCTGGATTGGACACGCCGCTACCGTTCAGATGCT
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