mRNA_P-wetherbeei_contig1373.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1373.4.2
Unique NamemRNA_P-wetherbeei_contig1373.4.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1373.4.2 vs. uniprot
Match: A0A6H5K0E1_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E1_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 1.160e-71
Identity = 149/302 (49.34%), Postives = 194/302 (64.24%), Query Frame = 1
Query:    4 CTRRCIKGARDRDVMLKEVHALAGLTDVCEADTKHVVRYHQAWIEGERLFIQTELCDTGAGAGGIGEGRFFRTAAEAWDFLRQVLLGLDMLHKHNMVHLDVKPGNIFLKGGLYKLGDFGLVTPANAAG--DVAEGDSRYMSRELLNESFSDLTKCDIFSLGITLYELLAGGGNXXXXXXXXXXXXXXXALPPNGQEWHRLRDGSVSLLPPPAVPRELADVVRRMMQPDAARRPSAAALLAQVPELRSDMERKLHEAQN-------MNKLLELQIAAGRRQQPAGASDGRRGRLKRNATWSDS 882
            C+RR  KG  DR  ML EV+ALA + D  + +T ++VRYHQAWIE ERL+IQTELC+T      +  G     +   + FLRQ LLGL++LH+H +VHLD+KPGNIF+K G YKLGDFGLVTP +     DV EGDSRYMS+ELLN+  S+LTKCD+FSLGITLYE+++G                  ALPPNG+EWHRLR G   +  P  +P EL+  +  MM PD ARRPSAA LL + P L+S+MER+L++ ++        N  L  +++A  ++Q       R GRL R  TW +S
Sbjct:  526 CSRRRFKGETDRQNMLMEVYALAAVCDSAQ-ETINIVRYHQAWIEEERLYIQTELCETSLEKQ-LESGHRLEISG-VYAFLRQTLLGLEILHQHKLVHLDIKPGNIFVKNGQYKLGDFGLVTPVHVRSGTDVVEGDSRYMSKELLNDDHSNLTKCDVFSLGITLYEIISG-----------------RALPPNGEEWHRLRSGKAGM--PMGLPAELSKTLHEMMDPDPARRPSAAELL-RYPCLQSEMERQLNDKKSELSKERTRNSGLLEEVSALIQKQSH-----RSGRLSRTITWDNS 799          
BLAST of mRNA_P-wetherbeei_contig1373.4.2 vs. uniprot
Match: A0A7S2SM20_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SM20_9STRA)

HSP 1 Score: 210 bits (534), Expect = 2.740e-63
Identity = 127/266 (47.74%), Postives = 167/266 (62.78%), Query Frame = 1
Query:    7 TRRCIKGARDRDVMLKEVHALAGLTDVCEADTKHVVRYHQAWIEGERLFIQTELCDTGAGAGGIGEGRFFRTAAEAWDFLRQVLLGLDMLHKHNMVHLDVKPGNIFLKGGLYKLGDFGLVTPANAAGDVAEGDSRYMSRELLNESFS-DLTKCDIFSLGITLYELLAGGGNXXXXXXXXXXXXXXXALPPNGQEWHRLRDGSVSLLPPPAVPRELADVVRRMMQPDAARRPSAAALLAQVPELRSDMERKLHEAQNMNKLLELQIA 801
            T++  KG  DR  ML+EV+AL+ L  V E  T H+VRYHQAWIE ERL+IQ ELC+       + E     +A E ++F RQ+ L LD+LH++N+VHLD+KPGNIF+K   YKLGDFGLV+PAN   +V EGDSRYMS+ELL+ +   DLTKCDIFSLG T+Y++                      LP NG++W  +R+G +   P    P  L  +VR MM+P+ A RPSA  LL   P L+SD+ER+L   Q+ NK L   +A
Sbjct:   22 TKQRFKGRSDRSRMLQEVYALSHLCAVEE--TPHIVRYHQAWIEDERLYIQMELCERTLEQA-LAENTIM-SATEMYNFARQMSLALDVLHRNNLVHLDIKPGNIFMKHEKYKLGDFGLVSPANTGDEVMEGDSRYMSKELLSMTVPRDLTKCDIFSLGCTMYQICR-----------------REQLPGNGEDWRAMREGQLQPFPA-TTPGSLELLVRFMMKPEPADRPSAEQLLHD-PNLQSDVERRLELEQHQNKRLRAALA 264          
BLAST of mRNA_P-wetherbeei_contig1373.4.2 vs. uniprot
Match: W7TCU9_9STRA (Membrane-associated tyrosine-and threonine-specific cdc2-inhibitory kinase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCU9_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.640e-59
Identity = 123/233 (52.79%), Postives = 149/233 (63.95%), Query Frame = 1
Query:    4 CTRRCIKGARDRDVMLKEVHALAGLTDVCEADTK----HVVRYHQAWIEGERLFIQTELCDTGA-GAGGIGEGRFFRTAAEAWDFLRQVLLGLDMLHKHNMVHLDVKPGNIFLKGGLYKLGDFGLVTPANAA---GD-VAEGDSRYMSRELLNESFSDLTKCDIFSLGITLYELLAGGGNXXXXXXXXXXXXXXXALPPNGQEWHRLRDGSVSLLPPPAVPRELADVVRRMMQ 675
            CTRR  +G  DR+  L+EV ALA    VC AD+     HVVRYHQAWIE ERLF+QTELC+    GA   GE   F    E +DF+RQ+LL LD+LH+H +VHLDVKPGNIF+K G+YKLGDFGLV   N++   GD + EGDSRYMS ELL +   DLTKCDIFSLG T+YE+  G                  ALPPNG+EWH LR G      PP++  E A +V  +M+
Sbjct:  270 CTRRRFRGPADRNRYLQEVKALA---KVCAADSSEEVLHVVRYHQAWIEDERLFMQTELCEESLDGALRAGEKMGFE---EVFDFMRQMLLALDVLHRHGLVHLDVKPGNIFIKAGVYKLGDFGLVASVNSSDGLGDSLVEGDSRYMSAELLQDGPKDLTKCDIFSLGATVYEMGRG-----------------RALPPNGEEWHALRSGH-----PPSLKGEPAVLVSDLMR 474          
BLAST of mRNA_P-wetherbeei_contig1373.4.2 vs. uniprot
Match: A0A1E7FT83_9STRA (Kinase-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FT83_9STRA)

HSP 1 Score: 198 bits (503), Expect = 6.660e-59
Identity = 113/240 (47.08%), Postives = 148/240 (61.67%), Query Frame = 1
Query:   13 RCIKGARDRDVMLKEVHALAGLTDVCEADTKHVVRYHQAWIEGERLFIQTELCDTGAGAGGIGEGRFFRTAAEAWDFLRQVLLGLDMLHKHNMVHLDVKPGNIFLKGGLYKLGDFGLVTPANAAGDVAEGDSRYMSRELLNESFSDLTKCDIFSLGITLYELLAGGGNXXXXXXXXXXXXXXXALPPNGQEWHRLRDGSVSLLPPPAVPRELADVVRRMMQPDAARRPSAAALLAQVPEL 732
            R  +G  D+D MLKEV+ALA L+D  +  T H+VRYHQAW+E +RL+IQTELC T   A            +  +  +R++LL L+ +H++ MVHLD+KP NIFLK   +KLGDFGLV+  ++  DV EGDSRYMS+ELL+   +DLTK DIFSLGIT+YEL  G                  ALP NG EW  LR G +  +PP   P +L  +++ MM P    RP A+ LL + PEL
Sbjct:   39 RAARGESDKDRMLKEVYALAALSDQADTATFHIVRYHQAWMEEQRLYIQTELCTTTLQAEIEQVAPMQLPLSTRYKCMREILLALEFIHRNGMVHLDIKPENIFLKNDQFKLGDFGLVSKVSSH-DVEEGDSRYMSKELLSGDHADLTKSDIFSLGITMYELCLGRSK---------------ALPSNGPEWQSLRSGRI--IPPLNTPDDLLQIIKSMMNPTYQERPCASGLL-KFPEL 259          
BLAST of mRNA_P-wetherbeei_contig1373.4.2 vs. uniprot
Match: A0A8J2SHI0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHI0_9STRA)

HSP 1 Score: 205 bits (522), Expect = 6.590e-58
Identity = 124/262 (47.33%), Postives = 157/262 (59.92%), Query Frame = 1
Query:   22 KGARDRDVMLKEVHALAGLT--DVCEADTKHVVRYHQAWIEGERLFIQTELCDTGAGAGGIGEGRFFRTAAEAWDFLRQVLLGLDMLHKHNMVHLDVKPGNIFLKG--------GLYKLGDFGLVTPANAAGDVAEGDSRYMSRELLNESF---------SDLTKCDIFSLGITLYELLAGGGNXXXXXXXXXXXXXXXALPPNGQEWHRLRDGSVSLLPPPAVPRELADVVRRMMQPDAARRPSAAALLAQVPELRSDMER 750
            +G   RD  LKEV ALA L+  D      +H+VRY+QAWIE ERL+IQTELCD    +  +  GRF  T    W FLRQ+LL L++LH   +VHLD+KPGNIF+KG          YKLGDFGL T A A GDV EGD+RYMS+ELL++            DLTKCD+FSLG T +EL+                     L  NG  WH LRDG+ +   P  VPR+L DV+  ++ P+ A RP+AAA L Q PEL+S+++R
Sbjct:  222 RGQLHRDRTLKEVFALAALSARDEGAEGLRHIVRYYQAWIEDERLYIQTELCDASLESR-VRRGRFLPTPPAVWGFLRQMLLALELLHARGLVHLDLKPGNIFVKGEDPRGSREDCYKLGDFGLATTARARGDVVEGDARYMSKELLDDDDFMSGGRSGPRDLTKCDVFSLGATAFELVRRA-----------------PLAANGPAWHALRDGAAAF--PATVPRDLRDVIAGLVHPNPAWRPTAAAAL-QHPELQSEVQR 462          
BLAST of mRNA_P-wetherbeei_contig1373.4.2 vs. uniprot
Match: B8BZ60_THAPS (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ60_THAPS)

HSP 1 Score: 194 bits (493), Expect = 2.530e-57
Identity = 110/235 (46.81%), Postives = 140/235 (59.57%), Query Frame = 1
Query:   10 RRCIKGARDRDVMLKEVHALAGLTDVCEADTKHVVRYHQAWIEGERLFIQTELCDTGAGAGGIGEGRFFRTAAEAWDFLRQVLLGLDMLHKHNMVHLDVKPGNIFLKGGLYKLGDFGLVTPANAAGDVAEGDSRYMSRELLNESFSDLTKCDIFSLGITLYELLAGGGNXXXXXXXXXXXXXXXALPPNGQEWHRLRDGSVSLLPPPAVPRELADVVRRMMQPDAARRPSAAALL 714
            +R  +G  DRD ML+EV+ALA L+D    +  H+VRYHQAW+EG RL+IQTELCD   G+  +   +        +  LR++LL LD +HK  M+HLD+KP NIF+K   YKLGDFGLV+      DV EGDSRYMS ELL+    DLTK D+FSLG T+YE+                     +LP NGQEW  +R G   LLP P    +L  ++R MM P+   RPSA  LL
Sbjct:   46 KREARGISDRDRMLQEVYALAALSDQTSPEAMHIVRYHQAWMEGNRLYIQTELCD---GSLKMEMTQGVMEEKRRYKLLREMLLALDFVHKSGMIHLDIKPENIFIKKDQYKLGDFGLVSKIENRNDVEEGDSRYMSMELLSGDLDDLTKSDVFSLGTTMYEICL-----------------CRSLPENGQEWQDIRHGM--LLPMPNTAFDLQMIIREMMAPEKESRPSAMKLL 258          
BLAST of mRNA_P-wetherbeei_contig1373.4.2 vs. uniprot
Match: A0A7S1BXW1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BXW1_9STRA)

HSP 1 Score: 194 bits (492), Expect = 4.540e-57
Identity = 121/293 (41.30%), Postives = 170/293 (58.02%), Query Frame = 1
Query:    7 TRRCIKGARDRDVMLKEVHALAGLTDVCEADTKHVVRYHQAWIEGERLFIQTELCDTGAGAGGIGEGRFFRTAAEAWDFLRQVLLGLDMLHKHNMVHLDVKPGNIFLKGGLYKLGDFGLVTPANAAGDVAEGDSRYMSRELLNESFSDLTKCDIFSLGITLYELLAGGGNXXXXXXXXXXXXXXXALPPNGQEWHRLRDGSVSLLPPPAVPRELADVVRRMMQPDAARRPSAAALLAQVPELRSDMERKLHEAQNMNKL----LELQIAAGRRQQPAGASDGRRGRLKRNATW 873
            ++R IKG+  R  ML+EV+ALA L+D     T H+VRY+QAW+E   L+IQTELCD       I E     T +  + FLRQ+LL L +LH +++VHLD+KP NIF+KG  YKLGDFGL         + EGDSRYM+ ELL E  S+LTKCDIFSLG T+YE+  G                  ALP  G++W ++R G +SL+P   + +EL  +  +M+ P+   RPSA  LL ++  L S  +++L   +  N +    L+LQ+     ++  G     R +L R +TW
Sbjct:    5 SKRKIKGSGSRSNMLREVYALAALSDQATEGTFHIVRYYQAWVEESTLYIQTELCDGNLRQ--IMEKNGLSTDSCRFSFLRQILLALALLHDNSIVHLDIKPENIFIKGDQYKLGDFGLAKNVTQTQFIEEGDSRYMAEELLLEDHSNLTKCDIFSLGATMYEICLG-----------------CALPSEGEDWKKIRAGELSLMP--YINKELQKITTKMLSPNPTIRPSAKVLL-KLHNLMSPEQQELVTERKKNAIANSALQLQVEMNSSRELKG-----RTKLARRSTW 270          
BLAST of mRNA_P-wetherbeei_contig1373.4.2 vs. uniprot
Match: A0A1Z5KQN8_FISSO (Wee1-like protein kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQN8_FISSO)

HSP 1 Score: 204 bits (519), Expect = 1.360e-56
Identity = 135/294 (45.92%), Postives = 175/294 (59.52%), Query Frame = 1
Query:   13 RCIKGARDRDVMLKEVHALAGLTDVCEADTKHVVRYHQAWIEGERLFIQTELC-----DTGAGAGGIGEGRFFRTAAEAWDFLRQVLLGLDMLHKHNMVHLDVKPGNIFLKGGLYKLGDFGLVTPANAAGDVAEGDSRYMSRELLNESFSDLTKCDIFSLGITLYELLAGGGNXXXXXXXXXXXXXXXALPPNGQEWHRLRDGSVSLLPPPAVPRELADVVRRMMQPDAARRPSAAALLAQVPELRSDMERKLHEAQNMNKLLELQIAAGRR--QQPAGASDGRRGRLKRNATW 873
            R  KG  DRD ML+EV+ALA L+D  +  T H+VRYHQAW+E +RL+IQTELC     D  A  GG+ E R ++        LR++LL L  +H++ M HLD+KP NIFLK   YKLGDFGLVT A+A+ +V EGDSRYMS ELL+   SDLTK DIFSLGI++YEL  G                   LP +G++W  LR G    LP  +V  EL  +++RMM P   +RPSA  LL   P+L SD E+ L   ++      LQ+ A ++  Q P  A   R+ +L R  TW
Sbjct:  511 RQAKGRADRDRMLQEVYALATLSDQADTATFHIVRYHQAWMEDDRLYIQTELCTGTLLDEIAHCGGLSEPRKYK-------LLREILLALAFIHRNKMCHLDIKPENIFLKNDQYKLGDFGLVTVASASQNVEEGDSRYMSMELLSGDRSDLTKSDIFSLGISVYELCLG-----------------QPLPTSGEKWQDLRAGRFDPLPGTSV--ELTMLIKRMMNPKPDQRPSATELLKH-PKLLSDEEKALIRERDKVAAANLQLQAAQQFHQFPPPAQQLRK-KLTRANTW 776          
BLAST of mRNA_P-wetherbeei_contig1373.4.2 vs. uniprot
Match: A0A7S1CTE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CTE8_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.670e-56
Identity = 116/253 (45.85%), Postives = 150/253 (59.29%), Query Frame = 1
Query:   10 RRCIKGARDRDVMLKEVHALAGLTDVCEADTKHVVRYHQAWIEGERLFIQTELCDTG----AGAGGIGEGRFFRTAAEAWDFLRQVLLGLDMLHKHNMVHLDVKPGNIFLKGGLYKLGDFGLVTPANAAGDVAEGDSRYMSRELLNESFSDLTKCDIFSLGITLYELLAGGGNXXXXXXXXXXXXXXXALPPNGQEWHRLRDGSVSLLPPPAVPRELADVVRRMMQPDAARRPSAAALLAQVPELRSDMERKL 756
            +R  +G  DRD ML+EV+ALA L+D   A   H+VRYHQAW+EG RL+IQTELC +        G + E R ++        LR++LL LD +H+  M+HLD+KP NIF+K   YKLGDFGLV+      DV EGDSRYMS ELL+    DLTK DIFSLG TLYE+  G G                 LP NGQEW  +R G   LLP      +   +V+ MM P+   RP+A+ LL +  +L S+ +R+L
Sbjct:   48 KREARGKSDRDRMLQEVYALAALSDQTSAGAMHIVRYHQAWMEGNRLYIQTELCQSTLMDEVSEGAMNEKRLYK-------LLREILLALDYVHQSGMIHLDIKPDNIFIKNDQYKLGDFGLVSKIENHDDVEEGDSRYMSMELLSGDLEDLTKSDIFSLGATLYEICLGRG-----------------LPENGQEWQDIRKGV--LLPMGNNSFDFQMIVQTMMSPEKEDRPTASELLKK-RQLLSEEQRQL 273          
BLAST of mRNA_P-wetherbeei_contig1373.4.2 vs. uniprot
Match: A0A6T8GSH0_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8GSH0_9STRA)

HSP 1 Score: 198 bits (504), Expect = 2.120e-56
Identity = 121/272 (44.49%), Postives = 167/272 (61.40%), Query Frame = 1
Query:   10 RRCIKGARDRDVMLKEVHALAGLTDVCEADTKHVVRYHQAWIEGERLFIQTELCDTGAG---AGGIGEGRFFRTAAEAWDFLRQVLLGLDMLHKHNMVHLDVKPGNIFLKGGLYKLGDFGLVTPANAAGDVAEGDSRYMSRELLNESFSDLTKCDIFSLGITLYELLAGGGNXXXXXXXXXXXXXXXALPPNGQEWHRLRDGSVSLLPPPAVPRELADVVRRMMQPDAARRPSAAALLAQVPELRSDMERKLHEAQNMNKLLELQIAAGRRQ 816
            RR  KG  DRD MLKEV+ALA L+D  E+   H+VRYHQAW+E +RL+IQTELC +      +    E R F+        LR++LL L++LH+++MVHLD+KP NIF K   +KLGDFGLV+   +  DV EGDSRYMS ELL+   SDLTK D+FSLG +LYE+  G                   LP NG EW R+R G   L P P + ++L  ++  MM P+A++RP+A  LL Q  +L S+ +++L   +N  +   + +AA ++Q
Sbjct:  218 RREAKGVADRDRMLKEVYALAALSDRAESAAFHIVRYHQAWMEDDRLYIQTELCTSTLQEEKSTQFDEQRCFK-------LLREILLALELLHRNDMVHLDIKPENIFYKNNQWKLGDFGLVSKITSHNDVEEGDSRYMSMELLSGDHSDLTKSDVFSLGASLYEVCLG-----------------RPLPANGDEWQRIRAGI--LYPMPHISQDLRKLIIEMMNPEASQRPTAKHLL-QRRQLMSEEQQQLLTERNKAEKANMALAAHQKQ 462          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1373.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0E1_9PHAE1.160e-7149.34Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A7S2SM20_9STRA2.740e-6347.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TCU9_9STRA2.640e-5952.79Membrane-associated tyrosine-and threonine-specifi... [more]
A0A1E7FT83_9STRA6.660e-5947.08Kinase-like protein (Fragment) n=1 Tax=Fragilariop... [more]
A0A8J2SHI0_9STRA6.590e-5847.33Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
B8BZ60_THAPS2.530e-5746.81Protein kinase domain-containing protein (Fragment... [more]
A0A7S1BXW1_9STRA4.540e-5741.30Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A1Z5KQN8_FISSO1.360e-5645.92Wee1-like protein kinase n=2 Tax=Fistulifera solar... [more]
A0A7S1CTE8_9STRA1.670e-5645.85Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A6T8GSH0_9STRA2.120e-5644.49Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1373contigP-wetherbeei_contig1373:5905..7289 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G343
PFAMsPkinase
Model size897
Max annot lvl2759|Eukaryota
KEGG koko:K06632,ko:K06633
KEGG Pathwayko04110,ko04114,ko04914,map04110,map04114,map04914
KEGG ModuleM00693
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.97e-71
EggNOG OGsKOG0601@1|root,KOG0601@2759|Eukaryota
EC2.7.11.1
Descriptionprotein kinase activity
Cds size897
COG categoryT
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko01009,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185995.659403-CDS-P-wetherbeei_contig1373:5904..65101683185995.659403-CDS-P-wetherbeei_contig1373:5904..6510Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1373 5905..6510 -
1683185995.668386-CDS-P-wetherbeei_contig1373:6713..68281683185995.668386-CDS-P-wetherbeei_contig1373:6713..6828Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1373 6714..6828 -
1683185995.6758814-CDS-P-wetherbeei_contig1373:7113..72891683185995.6758814-CDS-P-wetherbeei_contig1373:7113..7289Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1373 7114..7289 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1373.4.2prot_P-wetherbeei_contig1373.4.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1373 5905..7289 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1373.4.2

>prot_P-wetherbeei_contig1373.4.2 ID=prot_P-wetherbeei_contig1373.4.2|Name=mRNA_P-wetherbeei_contig1373.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=299bp
MCTRRCIKGARDRDVMLKEVHALAGLTDVCEADTKHVVRYHQAWIEGERL
FIQTELCDTGAGAGGIGEGRFFRTAAEAWDFLRQVLLGLDMLHKHNMVHL
DVKPGNIFLKGGLYKLGDFGLVTPANAAGDVAEGDSRYMSRELLNESFSD
LTKCDIFSLGITLYELLAGGGNGGGNGGSNGGGTGGGALPPNGQEWHRLR
DGSVSLLPPPAVPRELADVVRRMMQPDAARRPSAAALLAQVPELRSDMER
KLHEAQNMNKLLELQIAAGRRQQPAGASDGRRGRLKRNATWSDSSSSAS
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mRNA from alignment at P-wetherbeei_contig1373:5905..7289-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1373.4.2 ID=mRNA_P-wetherbeei_contig1373.4.2|Name=mRNA_P-wetherbeei_contig1373.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1385bp|location=Sequence derived from alignment at P-wetherbeei_contig1373:5905..7289- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGCACGCGGCGGTGCATCAAGGGCGCCCGGGACCGCGACGTCATGCT GAAAGAGGTGCACGCGCTGGCAGGGCTGACAGACGTGTGCGAGGCCGACA CCAAGCACGTGGTGCGTTACCACCAGGCATGGATCGAAGGGGAGCGCCTC TTCATCCAGACTGAGCTCTGCGACACGTCCCTCGACCAACAGCTGCTGCG CAGCGCCGCTGCCGCCAGTGCGACAGGCGCTGCGGCCGAGGCTGACACCG CCGCTGGAGGGGGTGCGGCCGCCGCCGCCGGCGGCCGTGACGTTGCGTTT TCCGGCGGGAGCGGCAGCTCAGCGGCTAGCGAAAACGACGGCGCGGCGGA CTGCGAGAGCGGCGGCGCAGCGGACTGCGAGAGCGGCGGCGCAGCGGCTG GCAGGCATGCCGCTGGTGGCGCCGCTGACTGGAGCGATGCCTTTGGCGGC GGCATGGCAAGCGGCGCCGGCGCCGGCGGCATCGGCGAGGGCCGCTTCTT CCGTACGGCGGCTGAGGCGTGGGACTTCCTGCGACAGGTCCTGCTGGGGC TCGACATGCTTCACAAGCACAACATGGTGAGCACCGTTGTCTTTCTTGCA GCACGTCAGGAAGAATCTTCGCGGACCACTAAAGCGAGGCTGATGTCCCG GGTTTATCTCTCTAGTCTACTCTCTCTTCTCCACATTTCGCTCCTTAAGG TTTTCCCTCTCCTTTGCTTGATCCCCGAAATCTGGCCCTAAACTCTCTCC TTCGCCTGCTTCTCTTCCCAAATTTTCAGGTGCACCTCGATGTCAAGCCA GGCAACATCTTTCTGAAGGGCGGCCTTTACAAGCTGGGCGACTTCGGGCT GGTCACGCCGGCCAACGCCGCCGGTGACGTCGCCGAGGGGGACAGCCGGT ACATGTCCCGCGAGCTCCTCAACGAGTCCTTTTCCGACCTGACGAAGTGC GACATCTTCTCGCTCGGCATCACACTCTATGAGCTGCTGGCGGGCGGCGG CAACGGCGGCGGCAATGGCGGTAGCAACGGCGGCGGTACTGGCGGCGGGG CGCTCCCGCCGAATGGGCAAGAGTGGCACCGGCTCCGGGACGGATCGGTG TCGCTCCTGCCGCCGCCGGCGGTCCCGCGCGAGCTGGCGGATGTGGTCCG GCGGATGATGCAACCGGACGCGGCGCGGCGCCCCTCTGCGGCGGCGCTGC TGGCGCAGGTGCCGGAGCTACGGAGCGACATGGAGCGCAAATTGCACGAG GCGCAAAACATGAACAAGCTGCTGGAGCTGCAGATCGCGGCCGGGCGACG GCAGCAGCCGGCGGGGGCCAGCGACGGCCGCCGCGGCCGCCTCAAGCGCA ACGCCACATGGAGCGACTCGTCGTCATCCGCCTCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1373:5905..7289-

>mRNA_P-wetherbeei_contig1373.4.2 ID=mRNA_P-wetherbeei_contig1373.4.2|Name=mRNA_P-wetherbeei_contig1373.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=897bp|location=Sequence derived from alignment at P-wetherbeei_contig1373:5905..7289- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGCACGCGGCGGTGCATCAAGGGCGCCCGGGACCGCGACGTCATGCT
GAAAGAGGTGCACGCGCTGGCAGGGCTGACAGACGTGTGCGAGGCCGACA
CCAAGCACGTGGTGCGTTACCACCAGGCATGGATCGAAGGGGAGCGCCTC
TTCATCCAGACTGAGCTCTGCGACACCGGCGCCGGCGCCGGCGGCATCGG
CGAGGGCCGCTTCTTCCGTACGGCGGCTGAGGCGTGGGACTTCCTGCGAC
AGGTCCTGCTGGGGCTCGACATGCTTCACAAGCACAACATGGTGCACCTC
GATGTCAAGCCAGGCAACATCTTTCTGAAGGGCGGCCTTTACAAGCTGGG
CGACTTCGGGCTGGTCACGCCGGCCAACGCCGCCGGTGACGTCGCCGAGG
GGGACAGCCGGTACATGTCCCGCGAGCTCCTCAACGAGTCCTTTTCCGAC
CTGACGAAGTGCGACATCTTCTCGCTCGGCATCACACTCTATGAGCTGCT
GGCGGGCGGCGGCAACGGCGGCGGCAATGGCGGTAGCAACGGCGGCGGTA
CTGGCGGCGGGGCGCTCCCGCCGAATGGGCAAGAGTGGCACCGGCTCCGG
GACGGATCGGTGTCGCTCCTGCCGCCGCCGGCGGTCCCGCGCGAGCTGGC
GGATGTGGTCCGGCGGATGATGCAACCGGACGCGGCGCGGCGCCCCTCTG
CGGCGGCGCTGCTGGCGCAGGTGCCGGAGCTACGGAGCGACATGGAGCGC
AAATTGCACGAGGCGCAAAACATGAACAAGCTGCTGGAGCTGCAGATCGC
GGCCGGGCGACGGCAGCAGCCGGCGGGGGCCAGCGACGGCCGCCGCGGCC
GCCTCAAGCGCAACGCCACATGGAGCGACTCGTCGTCATCCGCCTCG
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