mRNA_P-wetherbeei_contig13703.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13703.1.1
Unique NamemRNA_P-wetherbeei_contig13703.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig13703.1.1 vs. uniprot
Match: A0A350W4E9_9BACT (Uncharacterized protein n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A350W4E9_9BACT)

HSP 1 Score: 77.0 bits (188), Expect = 5.590e-12
Identity = 53/196 (27.04%), Postives = 88/196 (44.90%), Query Frame = 1 
Query:   10 LPVNFQSDQNYDCVRCGRGCEGHWNISVTEDKVQALRPTALVQKVIKEDGDPFTPVEGTKYHLRKKNGHCVFLEPGAGEFQGCQVCGIHAHIGYEAKPTTCKNFPFIVVETPEEVRVGASFYCTAVQQNVGRPLSVHTDAVEAFGT--SERMHVGKKPIQVYEGLTTDWAGYKKVVEF-LEHPASGESYESRLVRA 588
            +P NF     Y C+     C  +W+I + E+  + L      +   K  G      E  + +    +  C+FL+         + C IH  +G++AK +TCK +PF  ++T + + V  SF C ++ +N G PL      +E   +   E+M    + + V E     W  YKK+  F L+   +G +YES L  A
Sbjct:   10 IPENFC----YTCLPNCAVCCKNWSIDIDEETYKNLSKVEWEKISEKFVGRKKFIEENNRKYFELIDDKCIFLDDD-------KYCLIHKKLGFDAKTSTCKIYPFKFIKTADGIIVRLSFVCPSIIKNTGIPLEEQIAEIEKIASLKPEQMRRINETVAVNEDFKISWPDYKKLENFILDLLKTGNNYESSLKSA 194
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BLAST of mRNA_P-wetherbeei_contig13703.1.1 vs. uniprot
Match: A0A356TEY1_9DELT (Uncharacterized protein n=2 Tax=Myxococcales TaxID=29 RepID=A0A356TEY1_9DELT)

HSP 1 Score: 57.8 bits (138), Expect = 9.810e-6
Identity = 44/152 (28.95%), Postives = 66/152 (43.42%), Query Frame = 1 
Query:   13 PVNFQSDQNYDCVRCGRGCEG-HWNISVTEDKVQALRPTALVQKVIKEDGDPFTPVEGTKYHLRKKNGHCVFLEPGAGEFQGCQVCGIHAHIGYEAKPTTCKNFPFIVVETPEEVRVGASFYCTAVQQNVGRPLSVHTDAVEAFGTSERMHV 465
            P+  +    + C   G  C   H    VT D+ + L   A+ ++++   GD        +  +   +G C+F   GAG      VC +HA +G E KP +CK FPF++V TP   RV     C         PL+  +DA  A  T    H+
Sbjct:    9 PLRVRPGARFTCHGDGLCCSDVHLLGPVTGDEARVLN--AIDERILAWSGDD-------RVLVTTVDGRCMFA--GAG------VCELHARLGPEVKPASCKQFPFMLVTTPTGGRVTTEHRCPCRSMGERAPLT--SDAALASTTHATRHI 141
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13703.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A350W4E9_9BACT5.590e-1227.04Uncharacterized protein n=1 Tax=Elusimicrobia bact... [more]
A0A356TEY1_9DELT9.810e-628.95Uncharacterized protein n=2 Tax=Myxococcales TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13703contigP-wetherbeei_contig13703:682..1707 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1210884.HG799462_gene8930
Model size1026
Max annot lvl203682|Planctomycetes
KEGG koko:K18475
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.13e-05
EggNOG OGs2DX1R@1|root,34301@2|Bacteria,2J54M@203682|Planctomycetes
Cds size1026
BRITEko00000,ko01000,ko02035
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185995.1196082-CDS-P-wetherbeei_contig13703:681..17071683185995.1196082-CDS-P-wetherbeei_contig13703:681..1707Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13703 682..1707 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13703.1.1prot_P-wetherbeei_contig13703.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13703 682..1707 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13703.1.1

>prot_P-wetherbeei_contig13703.1.1 ID=prot_P-wetherbeei_contig13703.1.1|Name=mRNA_P-wetherbeei_contig13703.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=342bp
MHQLPVNFQSDQNYDCVRCGRGCEGHWNISVTEDKVQALRPTALVQKVIK
EDGDPFTPVEGTKYHLRKKNGHCVFLEPGAGEFQGCQVCGIHAHIGYEAK
PTTCKNFPFIVVETPEEVRVGASFYCTAVQQNVGRPLSVHTDAVEAFGTS
ERMHVGKKPIQVYEGLTTDWAGYKKVVEFLEHPASGESYESRLVRALLGM
ARVILSAQEGVSISADDIEEALQSAQPSLDTAEWFQILKTSCLHGITLYI
ECDETEEVQTVMAALFGGTEVFLPNILWKGPVQALLEFRETALPPELQAE
ADRYYRSILFRHYLGTHGSFFESLITLYLNANLIRQYSHLVA
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mRNA from alignment at P-wetherbeei_contig13703:682..1707-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13703.1.1 ID=mRNA_P-wetherbeei_contig13703.1.1|Name=mRNA_P-wetherbeei_contig13703.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1026bp|location=Sequence derived from alignment at P-wetherbeei_contig13703:682..1707- (Phaeothamnion wetherbeei SAG_119_79)
ATGCATCAGCTTCCCGTCAACTTTCAGTCCGATCAAAACTACGACTGCGT
CCGATGTGGCCGGGGCTGTGAGGGCCACTGGAACATCAGCGTCACGGAAG
ACAAAGTCCAGGCGCTGCGCCCTACCGCACTCGTGCAAAAAGTCATAAAA
GAAGATGGAGACCCTTTCACTCCTGTCGAGGGCACTAAATACCACCTGCG
CAAAAAGAATGGGCACTGCGTGTTCCTGGAACCGGGCGCAGGGGAATTTC
AGGGCTGTCAGGTTTGCGGTATCCACGCTCACATCGGCTACGAAGCCAAG
CCGACCACTTGTAAGAATTTTCCCTTCATCGTCGTGGAGACTCCTGAGGA
AGTCCGGGTAGGCGCATCTTTTTACTGCACGGCAGTACAACAAAATGTAG
GCCGCCCGCTCTCGGTCCATACAGACGCTGTCGAGGCTTTTGGCACCAGC
GAACGGATGCATGTAGGGAAAAAGCCGATTCAGGTCTACGAAGGTCTGAC
CACCGATTGGGCAGGCTACAAAAAGGTGGTCGAATTCCTCGAGCACCCAG
CTTCCGGGGAGTCCTACGAATCTCGCCTGGTTCGGGCCCTCTTAGGGATG
GCGAGGGTCATCTTGAGCGCCCAAGAAGGCGTTTCCATTTCTGCAGACGA
TATCGAGGAAGCTCTGCAAAGTGCGCAACCGAGCCTGGATACGGCGGAGT
GGTTCCAAATCTTGAAAACCAGTTGCCTGCACGGAATCACGCTCTATATC
GAATGTGATGAAACCGAGGAGGTCCAGACCGTGATGGCGGCCCTCTTTGG
CGGGACCGAGGTCTTTCTCCCCAACATTCTTTGGAAGGGGCCCGTCCAGG
CGCTTCTCGAGTTCCGCGAAACGGCTCTCCCACCCGAACTGCAGGCCGAG
GCCGACCGCTATTACCGCTCTATCCTCTTTCGCCACTACCTGGGGACGCA
CGGCTCTTTCTTCGAGTCGCTGATCACTCTCTATCTCAACGCCAATCTAA
TCCGCCAGTATTCCCACCTGGTGGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13703:682..1707-

>mRNA_P-wetherbeei_contig13703.1.1 ID=mRNA_P-wetherbeei_contig13703.1.1|Name=mRNA_P-wetherbeei_contig13703.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1026bp|location=Sequence derived from alignment at P-wetherbeei_contig13703:682..1707- (Phaeothamnion wetherbeei SAG_119_79)
ATGCATCAGCTTCCCGTCAACTTTCAGTCCGATCAAAACTACGACTGCGT
CCGATGTGGCCGGGGCTGTGAGGGCCACTGGAACATCAGCGTCACGGAAG
ACAAAGTCCAGGCGCTGCGCCCTACCGCACTCGTGCAAAAAGTCATAAAA
GAAGATGGAGACCCTTTCACTCCTGTCGAGGGCACTAAATACCACCTGCG
CAAAAAGAATGGGCACTGCGTGTTCCTGGAACCGGGCGCAGGGGAATTTC
AGGGCTGTCAGGTTTGCGGTATCCACGCTCACATCGGCTACGAAGCCAAG
CCGACCACTTGTAAGAATTTTCCCTTCATCGTCGTGGAGACTCCTGAGGA
AGTCCGGGTAGGCGCATCTTTTTACTGCACGGCAGTACAACAAAATGTAG
GCCGCCCGCTCTCGGTCCATACAGACGCTGTCGAGGCTTTTGGCACCAGC
GAACGGATGCATGTAGGGAAAAAGCCGATTCAGGTCTACGAAGGTCTGAC
CACCGATTGGGCAGGCTACAAAAAGGTGGTCGAATTCCTCGAGCACCCAG
CTTCCGGGGAGTCCTACGAATCTCGCCTGGTTCGGGCCCTCTTAGGGATG
GCGAGGGTCATCTTGAGCGCCCAAGAAGGCGTTTCCATTTCTGCAGACGA
TATCGAGGAAGCTCTGCAAAGTGCGCAACCGAGCCTGGATACGGCGGAGT
GGTTCCAAATCTTGAAAACCAGTTGCCTGCACGGAATCACGCTCTATATC
GAATGTGATGAAACCGAGGAGGTCCAGACCGTGATGGCGGCCCTCTTTGG
CGGGACCGAGGTCTTTCTCCCCAACATTCTTTGGAAGGGGCCCGTCCAGG
CGCTTCTCGAGTTCCGCGAAACGGCTCTCCCACCCGAACTGCAGGCCGAG
GCCGACCGCTATTACCGCTCTATCCTCTTTCGCCACTACCTGGGGACGCA
CGGCTCTTTCTTCGAGTCGCTGATCACTCTCTATCTCAACGCCAATCTAA
TCCGCCAGTATTCCCACCTGGTGGCG
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