mRNA_P-wetherbeei_contig13672.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13672.1.1
Unique NamemRNA_P-wetherbeei_contig13672.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13672.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13672contigP-wetherbeei_contig13672:43..1787 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog45157.CMN328CT
Preferred nameSLC35E3
PFAMsTPT
Model size1301
Max annot lvl2759|Eukaryota
KEGG rclassRC00017
KEGG koko:K05287,ko:K06643,ko:K12823,ko:K15283,ko:K15285
KEGG TC2.A.7.9
KEGG ReactionR05923,R05924,R08107
KEGG Pathwayko00563,ko01100,ko01522,ko01524,ko03040,ko04068,ko04110,ko04115,ko04120,ko04144,ko04151,ko04218,ko04919,ko05165,ko05169,ko05200,ko05202,ko05203,ko05205,ko05206,ko05214,ko05215,ko05218,ko05219,ko05220,map00563,map01100,map01522,map01524,map03040,map04068,map04110,map04115,map04120,map04144,map04151,map04218,map04919,map05165,map05169,map05200,map05202,map05203,map05205,map05206,map05214,map05215,map05218,map05219,map05220
KEGG ModuleM00065
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006810,GO:0006811,GO:0006820,GO:0008028,GO:0008150,GO:0008509,GO:0008514,GO:0008643,GO:0009507,GO:0009526,GO:0009528,GO:0009536,GO:0009670,GO:0009941,GO:0015075,GO:0015120,GO:0015121,GO:0015144,GO:0015291,GO:0015297,GO:0015301,GO:0015318,GO:0015355,GO:0015605,GO:0015711,GO:0015713,GO:0015714,GO:0015717,GO:0015718,GO:0015748,GO:0015849,GO:0016020,GO:0019866,GO:0022804,GO:0022857,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0034219,GO:0034220,GO:0035436,GO:0042170,GO:0042873,GO:0042879,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071917,GO:0089721,GO:0089722,GO:0098656,GO:0099516,GO:1901264,GO:1901505,GO:1903825,GO:1905039
Exons2
Evalue8.37e-09
EggNOG OGsKOG1441@1|root,KOG1441@2759|Eukaryota
EC2.3.2.27,3.6.4.13
Descriptioncarbohydrate transport
Cds size1053
COG categoryZ
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03009,ko03041,ko04121,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185994.3543675-CDS-P-wetherbeei_contig13672:42..1281683185994.3543675-CDS-P-wetherbeei_contig13672:42..128Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13672 43..128 -
1683185994.3680208-CDS-P-wetherbeei_contig13672:573..15401683185994.3680208-CDS-P-wetherbeei_contig13672:573..1540Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13672 574..1540 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185994.375379-UTR-P-wetherbeei_contig13672:1540..17871683185994.375379-UTR-P-wetherbeei_contig13672:1540..1787Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13672 1541..1787 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13672.1.1prot_P-wetherbeei_contig13672.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13672 43..1540 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13672.1.1

>prot_P-wetherbeei_contig13672.1.1 ID=prot_P-wetherbeei_contig13672.1.1|Name=mRNA_P-wetherbeei_contig13672.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=351bp
MHTLLFSCGGRYCTAAAAAVLCKLALPSKGGAADPLDAVAAVVELTLSQC
LVGALILNVGLRLRNRSNGIKTATPFTDTSRQMVAVSLAHLVGNFCTNAM
YLLSSASITQVLKASEPVCTVLLMRWFVGTRYSHAVYLCIATIIVGVSMA
AAAGKGSAGGSVSLWPVVLLCLVSNTTIPVRNVLSKVILNGPAASPTLPI
MPAAQKTTKGVDIESMPAMTAVSSAPFPSGSVENGKATAAISFAGDSVAL
FAVVATQGAAMLLPVYLAIKAPAALPLLMGGGKHALLSTPNPRDLLLAGL
FHGWYNVFSFFCLDALGSAMSHAVANVFKRVFSITIALISFRELPTAPSP
V
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mRNA from alignment at P-wetherbeei_contig13672:43..1787-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13672.1.1 ID=mRNA_P-wetherbeei_contig13672.1.1|Name=mRNA_P-wetherbeei_contig13672.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1745bp|location=Sequence derived from alignment at P-wetherbeei_contig13672:43..1787- (Phaeothamnion wetherbeei SAG_119_79)
AGATGCACCAAAATATCTTGATGCACCAAAACAAAAAATTCTGTGTTAAC
GAGCAGCTTGCGCTTTGCCACCCCAGCTAGTTTGAAGGCAGCGAGTACTT
CTTCTTTCCACTTTCGCACAAGCAGCCAATCCTGGCCTCCTTTCTTTCCC
AAGCGAATCCTGGCCTCCTTTCTTTCCAAAGCAACAGGGGGACGACCCGA
CTACTCGTACGGGCCCTTCTTTTCTTTCCCTTCTTCTCCCAAACTCTATG
CACACCCTTCTCTTCTCCTGCGGCGGCAGGTACTGCACGGCGGCCGCGGC
AGCCGTGCTGTGCAAGCTGGCGCTCCCGTCGAAAGGCGGCGCCGCAGATC
CGCTCGATGCCGTCGCTGCTGTCGTGGAGCTGACGTTGTCGCAGTGCCTC
GTCGGCGCCCTTATTCTCAACGTCGGCCTCCGGCTGCGCAACCGGTCCAA
CGGCATAAAAACGGCCACTCCGTTCACTGACACCTCGCGGCAGATGGTGG
CGGTGAGTCTCGCCCACCTCGTTGGCAACTTCTGCACAAACGCCATGTAC
CTGCTGTCGTCGGCGAGCATCACACAGGTGCTGAAGGCCTCGGAGCCCGT
CTGCACGGTGCTGCTGATGCGGTGGTTCGTCGGCACTCGGTACTCGCACG
CCGTTTACCTCTGCATCGCGACCATCATCGTGGGCGTCTCGATGGCGGCT
GCCGCCGGCAAGGGGTCTGCTGGGGGCAGTGTGTCGCTGTGGCCGGTCGT
TCTCCTCTGCCTCGTGTCCAACACGACCATCCCCGTGCGCAACGTGCTCA
GCAAGGTCATCCTCAACGGCCCGGCTGCTTCGCCGACCTTGCCCATCATG
CCTGCGGCCCAAAAGACAACAAAAGGGGTCGACATCGAATCGATGCCGGC
GATGACCGCGGTGAGCTCTGCGCCATTCCCGTCTGGTTCTGTGGAAAATG
GCAAGGCGACTGCTGCCATCTCGTTTGCCGGCGACAGCGTGGCGCTTTTC
GCCGTGGTGGCCACCCAGGGCGCGGCGATGCTGCTTCCCGTGTACCTGGC
GATCAAGGCGCCGGCGGCATTGCCCCTACTGATGGGCGGTGGGAAGCACG
CGCTTCTGTCGACGCCGAATCCGCGGGACTTGCTGCTGGCTGGGCTATTC
CACGGGTGGTACAACGTCTTCTCGTTCTTCTGCCTCGATGCCCTCGGCTC
GGCGATGTCGCACGGTGAGTCGGTTTCTGTCTCACTATTTTTTACTACCA
TTTTTGGGTGGGGGGAGGGGGGTATTACAACTTCAAGGTGGCTCGGATGA
GGTGCCCGGCTCTGTCCCGTGTCTTTTCTTCTTTGGCATCGTGGCGAGCG
CCCGCAGACACAGTCTGTCTATGTCCCATTTCCTTTCTTCCTTAGCATCG
ACCTGAGCGACCGAAGACACAGTCCGTTCCACTGCTGTGCCGTTGTCTAT
CATAGCGATGCTGCTGAACCGGCTATGAATACAATACCACCATACATTTA
CAAGCCCGTTTCGGCTGCTGTGTTATGCACCTCCTATGCTTTGCAAGGAG
CCTTGACGCGGCGCGCCGTTCGGCAGCTCAACCGCCAAGCGCTTTTCTCA
AAGAAACGTGGGGCATTGCTTGTCATCTTGCCTCTTTTCACCTCCATTCC
TTGGTGCAGCCGTAGCGAATGTCTTCAAGCGGGTCTTCTCCATCACGATC
GCGCTGATCTCCTTCCGGGAGTTGCCGACGGCCCCCTCGCCGGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13672:43..1787-

>mRNA_P-wetherbeei_contig13672.1.1 ID=mRNA_P-wetherbeei_contig13672.1.1|Name=mRNA_P-wetherbeei_contig13672.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1053bp|location=Sequence derived from alignment at P-wetherbeei_contig13672:43..1787- (Phaeothamnion wetherbeei SAG_119_79)
ATGCACACCCTTCTCTTCTCCTGCGGCGGCAGGTACTGCACGGCGGCCGC
GGCAGCCGTGCTGTGCAAGCTGGCGCTCCCGTCGAAAGGCGGCGCCGCAG
ATCCGCTCGATGCCGTCGCTGCTGTCGTGGAGCTGACGTTGTCGCAGTGC
CTCGTCGGCGCCCTTATTCTCAACGTCGGCCTCCGGCTGCGCAACCGGTC
CAACGGCATAAAAACGGCCACTCCGTTCACTGACACCTCGCGGCAGATGG
TGGCGGTGAGTCTCGCCCACCTCGTTGGCAACTTCTGCACAAACGCCATG
TACCTGCTGTCGTCGGCGAGCATCACACAGGTGCTGAAGGCCTCGGAGCC
CGTCTGCACGGTGCTGCTGATGCGGTGGTTCGTCGGCACTCGGTACTCGC
ACGCCGTTTACCTCTGCATCGCGACCATCATCGTGGGCGTCTCGATGGCG
GCTGCCGCCGGCAAGGGGTCTGCTGGGGGCAGTGTGTCGCTGTGGCCGGT
CGTTCTCCTCTGCCTCGTGTCCAACACGACCATCCCCGTGCGCAACGTGC
TCAGCAAGGTCATCCTCAACGGCCCGGCTGCTTCGCCGACCTTGCCCATC
ATGCCTGCGGCCCAAAAGACAACAAAAGGGGTCGACATCGAATCGATGCC
GGCGATGACCGCGGTGAGCTCTGCGCCATTCCCGTCTGGTTCTGTGGAAA
ATGGCAAGGCGACTGCTGCCATCTCGTTTGCCGGCGACAGCGTGGCGCTT
TTCGCCGTGGTGGCCACCCAGGGCGCGGCGATGCTGCTTCCCGTGTACCT
GGCGATCAAGGCGCCGGCGGCATTGCCCCTACTGATGGGCGGTGGGAAGC
ACGCGCTTCTGTCGACGCCGAATCCGCGGGACTTGCTGCTGGCTGGGCTA
TTCCACGGGTGGTACAACGTCTTCTCGTTCTTCTGCCTCGATGCCCTCGG
CTCGGCGATGTCGCACGCCGTAGCGAATGTCTTCAAGCGGGTCTTCTCCA
TCACGATCGCGCTGATCTCCTTCCGGGAGTTGCCGACGGCCCCCTCGCCG
GTC
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