mRNA_P-wetherbeei_contig13635.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13635.1.1
Unique NamemRNA_P-wetherbeei_contig13635.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: A0A836CHJ0_9STRA (DNA_mis_repair domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHJ0_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.020e-40
Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = 1 
Query:   19 LAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGVHFTHT 378
             +F+ARG VSNANYSTKRA F+LFIN RLV+S ++R+  ES Y+ VLP+G H F YLAL++PA H+DVNVHPTK+EVHFLHEEALLE L +ALE  L  AN SRTFYSQ  LPG+HF  T
Sbjct:  272 FSFRARGFVSNANYSTKRAVFILFINHRLVDSTSIRRTLESVYSSVLPKGTHAFIYLALSMPAPHLDVNVHPTKQEVHFLHEEALLERLRKALEDTLGSANRSRTFYSQSTLPGIHFDAT 391
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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: D8LIJ0_ECTSI (MutL protein homolog 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ0_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.320e-39
Identity = 76/118 (64.41%), Postives = 97/118 (82.20%), Query Frame = 1 
Query:   16 RLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGVHF 369
            + AF+A+GLVS A+YS KR+ F+LFINDRLVES +++K  ESAY DVLP+  HPF YL +T+P+ H+DVNVHPTKREVHFLH+E LLE L +A+E++L GAN SRTFYSQ +LP + F
Sbjct:  265 KFAFKAKGLVSGADYSAKRSDFILFINDRLVESPSIKKTVESAYKDVLPKNTHPFVYLGITMPSHHLDVNVHPTKREVHFLHQEELLECLRQAVEQKLAGANQSRTFYSQVILPDMDF 382
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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: A0A7S2RJJ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJJ5_9STRA)

HSP 1 Score: 151 bits (382), Expect = 8.040e-36
Identity = 72/115 (62.61%), Postives = 87/115 (75.65%), Query Frame = 1 
Query:   13 GRLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLP 357
            G  AF+ +G VSN NYS KR  F+LFIN RLVES A++K+ ES Y D+LP G+HPF YL+L LP RHVDVNV PTKREVHF+HE+ LL ALF  L+ +L  +N SRTFY Q +LP
Sbjct:  268 GGFAFRVKGYVSNGNYSAKRPAFILFINHRLVESPAIKKSVESVYKDILPSGSHPFVYLSLELPGRHVDVNVSPTKREVHFMHEDELLRALFEMLQAKLESSNQSRTFYCQTLLP 382
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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: A0A0G2JDY9_MOUSE (DNA mismatch repair protein Mlh1 (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=A0A0G2JDY9_MOUSE)

HSP 1 Score: 137 bits (346), Expect = 3.430e-35
Identity = 65/115 (56.52%), Postives = 89/115 (77.39%), Query Frame = 1 
Query:   19 LAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGV 363
            LAF+  G +SNANYS K+  F+LFIN RLVESAA+RKA E+ YA  LP+  HPF YL+L +  ++VDVNVHPTK EVHFLHEE++L+ + + +E +L G+N SR +++Q +LPG+
Sbjct:   33 LAFKMNGYISNANYSVKKCIFLLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQTLLPGL 147
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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: A0A3M6U441_POCDA (DNA_mis_repair domain-containing protein n=4 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6U441_POCDA)

HSP 1 Score: 145 bits (365), Expect = 1.060e-33
Identity = 68/123 (55.28%), Postives = 93/123 (75.61%), Query Frame = 1 
Query:   16 RLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGVHFTHTAA 384
            R AF+  G +SNANYS K+  F+LFIN RLV+S+A+RKA ES Y   LP+ +HPF YL+L +   +VDVNVHPTK EVHFLHE++++EA+ +  E +L GAN SRT+++Q +LPG+  T T+A
Sbjct:  243 RFAFKMHGYISNANYSVKKLQFLLFINHRLVDSSAMRKAIESLYEAYLPKNSHPFVYLSLEISPSNVDVNVHPTKHEVHFLHEDSIIEAIQQTFEEKLLGANSSRTYFTQTLLPGISVTDTSA 365
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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: A0A8B7XIU5_ACAPL (DNA mismatch repair protein Mlh1-like isoform X1 n=3 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XIU5_ACAPL)

HSP 1 Score: 144 bits (362), Expect = 2.600e-33
Identity = 67/114 (58.77%), Postives = 92/114 (80.70%), Query Frame = 1 
Query:   16 RLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLP 357
            +LAF+ RG +SNANYS K+  F+LFIN RLVES+++RKA ES YA  LP+G HPF YL+L +   +VDVNVHPTK+EVHFLHEEA++E + +++E++L G N SRT+++Q +LP
Sbjct:  235 KLAFKLRGFISNANYSVKKCIFLLFINHRLVESSSLRKAIESVYATYLPKGTHPFLYLSLEISPNNVDVNVHPTKQEVHFLHEEAIIEDIQQSIEQKLLGCNFSRTYFTQALLP 348
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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: UPI00145898EE (DNA mismatch repair protein Mlh1-like n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI00145898EE)

HSP 1 Score: 143 bits (361), Expect = 3.030e-33
Identity = 66/119 (55.46%), Postives = 94/119 (78.99%), Query Frame = 1 
Query:   16 RLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGVHFT 372
            +L+F+  G V+NANYS K+ T +LFIN RLV+S+A+RK+ +S Y   LP+ +HPF YL+L +  ++VDVNVHPTK EVHFLHE+A++E++ +A+E +L G+N SRTFY+Q +LPG  FT
Sbjct:  241 KLSFKVHGFVTNANYSMKKCTMLLFINHRLVDSSALRKSLDSVYQAYLPKNSHPFMYLSLEIAPQNVDVNVHPTKHEVHFLHEDAIIESVQQAVEAKLLGSNSSRTFYTQALLPGASFT 359
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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: K8YSR7_NANGC (DNA mismatch repair protein MLH1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSR7_NANGC)

HSP 1 Score: 141 bits (355), Expect = 3.460e-33
Identity = 69/115 (60.00%), Postives = 85/115 (73.91%), Query Frame = 1 
Query:   19 LAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGV 363
            L+F+A G VSNAN++ K+  F+LFIN+R+VES A+++  ES YA +LP   HPF YLAL LP  HVDVNVHPTKREVHFLHE+ LL  L   LE  LRGAN SRTFY + +  G+
Sbjct:  235 LSFKAHGYVSNANFNMKKGVFMLFINNRMVESTAIKRIMESVYAPILPTHTHPFLYLALDLPPAHVDVNVHPTKREVHFLHEDELLSKLAAGLEALLRGANTSRTFYGKSLAHGL 349
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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: UPI0009E65599 (DNA mismatch repair protein Mlh1-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E65599)

HSP 1 Score: 143 bits (361), Expect = 3.940e-33
Identity = 67/123 (54.47%), Postives = 94/123 (76.42%), Query Frame = 1 
Query:   16 RLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGVHFTHTAA 384
            R AF+  G +SNANYS K+  F+LFIN RLV+S+++RK+ ES Y   +P+ +HPF YL+L +   +VDVNVHPTK EVHFLHE++++EA+ +A E +L GAN SRT+++Q +LPGV  T T+A
Sbjct:  266 RYAFKMHGYISNANYSVKKLQFLLFINHRLVDSSSMRKSIESLYEAYIPKNSHPFVYLSLEIAPSNVDVNVHPTKHEVHFLHEDSIIEAIQKAFEEKLLGANSSRTYFTQTLLPGVAVTDTSA 388
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BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Match: A0A8J9ZMZ4_BRALA (MLH1 protein n=2 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZMZ4_BRALA)

HSP 1 Score: 141 bits (355), Expect = 4.080e-33
Identity = 66/116 (56.90%), Postives = 88/116 (75.86%), Query Frame = 1 
Query:   16 RLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYADVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALERRLRGANDSRTFYSQPVLPGV 363
            RLAF  +G +SNANYSTK+  F+LFIN RLV+S A+RKA E+ Y+  LP+  HPF Y+++ +   HVDVNVHPTK EVHFLHE+ ++EA+ + +E  L G N SRTF++Q +LPGV
Sbjct:  234 RLAFSMKGHISNANYSTKKFIFLLFINHRLVDSTALRKALEAVYSTYLPKNMHPFVYMSVEIMPSHVDVNVHPTKHEVHFLHEDVIIEAIQKQVETSLLGCNSSRTFFTQALLPGV 349
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13635.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CHJ0_9STRA1.020e-4067.50DNA_mis_repair domain-containing protein n=1 Tax=T... [more]
D8LIJ0_ECTSI1.320e-3964.41MutL protein homolog 1 n=1 Tax=Ectocarpus siliculo... [more]
A0A7S2RJJ5_9STRA8.040e-3662.61Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G2JDY9_MOUSE3.430e-3556.52DNA mismatch repair protein Mlh1 (Fragment) n=1 Ta... [more]
A0A3M6U441_POCDA1.060e-3355.28DNA_mis_repair domain-containing protein n=4 Tax=P... [more]
A0A8B7XIU5_ACAPL2.600e-3358.77DNA mismatch repair protein Mlh1-like isoform X1 n... [more]
UPI00145898EE3.030e-3355.46DNA mismatch repair protein Mlh1-like n=2 Tax=Pect... [more]
K8YSR7_NANGC3.460e-3360.00DNA mismatch repair protein MLH1 (Fragment) n=1 Ta... [more]
UPI0009E655993.940e-3354.47DNA mismatch repair protein Mlh1-like n=1 Tax=Orbi... [more]
A0A8J9ZMZ4_BRALA4.080e-3356.90MLH1 protein n=2 Tax=Branchiostoma lanceolatum Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13635contigP-wetherbeei_contig13635:115..1815 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LIJ0
Preferred nameMLH1
PFAMsDNA_mis_repair,HATPase_c_3,Mlh1_C
Model size1403
Max annot lvl2759|Eukaryota
KEGG koko:K04371,ko:K08734
KEGG Pathwayko01521,ko01522,ko01524,ko03430,ko03460,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map01524,map03430,map03460,map04010,map04011,map04012,map04013,map04014,map04015,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00295,M00687
Hectar predicted targeting categorymitochondrion
GOsGO:0000003,GO:0000018,GO:0000019,GO:0000166,GO:0000226,GO:0000228,GO:0000280,GO:0000288,GO:0000289,GO:0000710,GO:0000712,GO:0000713,GO:0000726,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0000795,GO:0000956,GO:0001666,GO:0001673,GO:0001775,GO:0002200,GO:0002204,GO:0002208,GO:0002250,GO:0002252,GO:0002263,GO:0002285,GO:0002312,GO:0002366,GO:0002376,GO:0002377,GO:0002381,GO:0002440,GO:0002443,GO:0002449,GO:0002460,GO:0002520,GO:0002562,GO:0002566,GO:0002637,GO:0002639,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0002700,GO:0002702,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002712,GO:0002714,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0002889,GO:0002891,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003697,GO:0003824,GO:0004518,GO:0004519,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005712,GO:0005713,GO:0005715,GO:0005737,GO:0005739,GO:0005829,GO:0005856,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006302,GO:0006303,GO:0006310,GO:0006312,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006955,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0007060,GO:0007127,GO:0007129,GO:0007131,GO:0007140,GO:0007143,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008630,GO:0009056,GO:0009057,GO:0009555,GO:0009628,GO:0009636,GO:0009791,GO:0009845,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010154,GO:0010468,GO:0010604,GO:0010605,GO:0010629,GO:0012501,GO:0014070,GO:0015630,GO:0016020,GO:0016043,GO:0016064,GO:0016070,GO:0016071,GO:0016321,GO:0016444,GO:0016445,GO:0016446,GO:0016447,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0019439,GO:0019724,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030554,GO:0030983,GO:0031323,GO:0031324,GO:0031325,GO:0031974,GO:0031981,GO:0032135,GO:0032137,GO:0032138,GO:0032300,GO:0032389,GO:0032501,GO:0032502,GO:0032504,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034397,GO:0034641,GO:0034655,GO:0035556,GO:0035639,GO:0035770,GO:0035825,GO:0036094,GO:0036293,GO:0036464,GO:0042113,GO:0042221,GO:0042493,GO:0043060,GO:0043073,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0045132,GO:0045141,GO:0045143,GO:0045190,GO:0045191,GO:0045321,GO:0045830,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046649,GO:0046700,GO:0048229,GO:0048232,GO:0048285,GO:0048296,GO:0048298,GO:0048302,GO:0048304,GO:0048316,GO:0048468,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050000,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050864,GO:0050865,GO:0050867,GO:0050871,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051094,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051225,GO:0051234,GO:0051239,GO:0051240,GO:0051249,GO:0051251,GO:0051255,GO:0051257,GO:0051276,GO:0051303,GO:0051304,GO:0051307,GO:0051310,GO:0051311,GO:0051321,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051716,GO:0060255,GO:0061458,GO:0061982,GO:0065007,GO:0070013,GO:0070192,GO:0070482,GO:0070887,GO:0070925,GO:0071310,GO:0071407,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090220,GO:0090304,GO:0090305,GO:0090351,GO:0097159,GO:0097190,GO:0097193,GO:0097367,GO:0097587,GO:0098813,GO:0099086,GO:0140013,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1903046,GO:1990391,GO:1990904,GO:2000026
Exons2
Evalue2.16e-40
EggNOG OGsCOG0323@1|root,KOG1979@2759|Eukaryota
EC2.7.11.24
Descriptionmismatched DNA binding
Cds size1401
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko03400,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185993.5697134-CDS-P-wetherbeei_contig13635:114..9231683185993.5697134-CDS-P-wetherbeei_contig13635:114..923Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13635 115..923 +
1683185993.5803099-CDS-P-wetherbeei_contig13635:1222..18141683185993.5803099-CDS-P-wetherbeei_contig13635:1222..1814Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13635 1223..1814 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13635.1.1prot_P-wetherbeei_contig13635.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13635 115..1814 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13635.1.1

>prot_P-wetherbeei_contig13635.1.1 ID=prot_P-wetherbeei_contig13635.1.1|Name=mRNA_P-wetherbeei_contig13635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=467bp
GGAGGRLAFQARGLVSNANYSTKRATFVLFINDRLVESAAVRKAFESAYA
DVLPRGAHPFAYLALTLPARHVDVNVHPTKREVHFLHEEALLEALFRALE
RRLRGANDSRTFYSQPVLPGVHFTHTAAAASGATSTAAAAAMGAGAGASF
GGGGGGGGGGAGAVSAGSRGGGASSTGAAASGPSGGARTSQAAAVAAAAG
AGSDGEDDDGEESQEIGGRSELEGRPAGGASAGKRKALTAVPRQAARPLE
DLARGGDRSGGSSSMGNGSGPRKKPYAPNKLVRTDASAASIDSFFKPLRT
GEGFAAGAAGGEAGGHRGGGAGGSHGGSSRASRSGGSDDSAVFLAPDADG
TCACPEPMDEEEVIGLDVLSDDDDVLLVAGLNPMGEDARPEEGATTATVT
RPSSGSAAAAAAISAGAAATSAAPAQRPQTHRRRAAAMPFGFVGRCGCCG
KAARGGAGGTARTTPPD
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mRNA from alignment at P-wetherbeei_contig13635:115..1815+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13635.1.1 ID=mRNA_P-wetherbeei_contig13635.1.1|Name=mRNA_P-wetherbeei_contig13635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1701bp|location=Sequence derived from alignment at P-wetherbeei_contig13635:115..1815+ (Phaeothamnion wetherbeei SAG_119_79)
GGCGGCGCGGGCGGGCGGCTGGCCTTCCAGGCGCGCGGATTGGTGTCCAA
TGCCAACTACAGCACAAAGCGCGCAACCTTCGTGCTCTTCATCAACGACC
GCCTGGTGGAGAGCGCCGCCGTCCGCAAGGCCTTCGAATCGGCGTACGCC
GATGTACTGCCGCGGGGCGCCCACCCGTTCGCCTACCTGGCGCTGACACT
GCCGGCGCGCCACGTCGACGTCAACGTGCACCCGACCAAGCGGGAGGTCC
ACTTCCTGCACGAGGAAGCGCTGCTGGAGGCGCTCTTCCGGGCGCTGGAG
CGGCGGCTCCGGGGCGCCAACGACTCGCGCACCTTCTACAGCCAGCCGGT
CCTGCCGGGCGTCCACTTTACCCACACCGCCGCTGCTGCTTCAGGAGCCA
CGTCGACGGCGGCGGCGGCCGCGATGGGAGCGGGAGCGGGAGCGAGCTTC
GGTGGTGGCGGCGGCGGAGGTGGCGGCGGCGCTGGTGCGGTCTCTGCCGG
GAGCCGGGGTGGAGGGGCCAGCAGCACCGGAGCGGCCGCATCTGGGCCCA
GTGGCGGCGCGCGCACGTCTCAGGCAGCGGCGGTGGCGGCAGCAGCGGGG
GCGGGCAGCGACGGTGAGGACGACGATGGAGAGGAATCGCAAGAGATAGG
CGGACGCAGCGAGTTGGAGGGGCGGCCGGCGGGCGGAGCATCGGCCGGAA
AGCGAAAGGCCCTCACGGCGGTGCCGCGGCAGGCGGCGCGGCCGCTGGAA
GATTTGGCCAGAGGCGGTGACCGCAGCGGCGGCAGCAGCAGCATGGGCAA
CGGGAGCGGGTAAGCTGTGTTTTCTTTTGAGAGTGGTCATTACTCTACCC
TGTCTTCGTCACAAACTCTGTGGGTGCCACTCGCTGGTCTTAACGGGCGA
TCAGTATCGATCAAAATATGTTTGGGATTCGGCAGAGCAACTACTTATAT
GCCGCCGTTCATATTCCTAAATGGCCGTCACTTACAGACGTTTGTCATAT
AGGTTTTTTAAGTTGGGTCCGTTTCTTTCGGACAACTGGTATGTGTGTGC
TTTTGAGTATTGACCTCGTCACGATCCGTCAACATTAATTATTGCCTTCC
TGTGGCAGGCCGCGCAAGAAGCCTTACGCCCCGAACAAGCTAGTGCGTAC
TGACGCCTCTGCCGCAAGCATCGATTCCTTCTTCAAGCCGCTGCGCACCG
GTGAAGGCTTTGCAGCTGGAGCCGCCGGAGGTGAAGCGGGCGGTCATCGC
GGCGGCGGCGCTGGTGGCAGCCACGGCGGCAGCAGCAGGGCCTCCCGCTC
CGGCGGCTCGGATGATTCCGCGGTTTTTTTGGCTCCTGATGCCGACGGCA
CGTGCGCTTGCCCCGAACCGATGGACGAGGAAGAAGTGATCGGGCTGGAT
GTCCTTTCGGATGACGACGACGTCCTCCTCGTTGCCGGTTTGAATCCGAT
GGGGGAAGACGCACGGCCGGAGGAGGGCGCGACGACAGCCACGGTGACGC
GTCCTTCGAGTGGATCTGCCGCTGCTGCTGCTGCTATTAGTGCTGGCGCT
GCTGCAACTTCAGCAGCGCCCGCCCAGCGGCCGCAAACGCACCGGCGCCG
TGCCGCTGCCATGCCGTTCGGATTTGTCGGGCGTTGCGGATGCTGCGGCA
AGGCAGCGAGAGGCGGCGCAGGAGGAACGGCAAGGACTACGCCGCCGGAC
G
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13635:115..1815+

>mRNA_P-wetherbeei_contig13635.1.1 ID=mRNA_P-wetherbeei_contig13635.1.1|Name=mRNA_P-wetherbeei_contig13635.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1401bp|location=Sequence derived from alignment at P-wetherbeei_contig13635:115..1815+ (Phaeothamnion wetherbeei SAG_119_79)
GGCGGCGCGGGCGGGCGGCTGGCCTTCCAGGCGCGCGGATTGGTGTCCAA
TGCCAACTACAGCACAAAGCGCGCAACCTTCGTGCTCTTCATCAACGACC
GCCTGGTGGAGAGCGCCGCCGTCCGCAAGGCCTTCGAATCGGCGTACGCC
GATGTACTGCCGCGGGGCGCCCACCCGTTCGCCTACCTGGCGCTGACACT
GCCGGCGCGCCACGTCGACGTCAACGTGCACCCGACCAAGCGGGAGGTCC
ACTTCCTGCACGAGGAAGCGCTGCTGGAGGCGCTCTTCCGGGCGCTGGAG
CGGCGGCTCCGGGGCGCCAACGACTCGCGCACCTTCTACAGCCAGCCGGT
CCTGCCGGGCGTCCACTTTACCCACACCGCCGCTGCTGCTTCAGGAGCCA
CGTCGACGGCGGCGGCGGCCGCGATGGGAGCGGGAGCGGGAGCGAGCTTC
GGTGGTGGCGGCGGCGGAGGTGGCGGCGGCGCTGGTGCGGTCTCTGCCGG
GAGCCGGGGTGGAGGGGCCAGCAGCACCGGAGCGGCCGCATCTGGGCCCA
GTGGCGGCGCGCGCACGTCTCAGGCAGCGGCGGTGGCGGCAGCAGCGGGG
GCGGGCAGCGACGGTGAGGACGACGATGGAGAGGAATCGCAAGAGATAGG
CGGACGCAGCGAGTTGGAGGGGCGGCCGGCGGGCGGAGCATCGGCCGGAA
AGCGAAAGGCCCTCACGGCGGTGCCGCGGCAGGCGGCGCGGCCGCTGGAA
GATTTGGCCAGAGGCGGTGACCGCAGCGGCGGCAGCAGCAGCATGGGCAA
CGGGAGCGGGCCGCGCAAGAAGCCTTACGCCCCGAACAAGCTAGTGCGTA
CTGACGCCTCTGCCGCAAGCATCGATTCCTTCTTCAAGCCGCTGCGCACC
GGTGAAGGCTTTGCAGCTGGAGCCGCCGGAGGTGAAGCGGGCGGTCATCG
CGGCGGCGGCGCTGGTGGCAGCCACGGCGGCAGCAGCAGGGCCTCCCGCT
CCGGCGGCTCGGATGATTCCGCGGTTTTTTTGGCTCCTGATGCCGACGGC
ACGTGCGCTTGCCCCGAACCGATGGACGAGGAAGAAGTGATCGGGCTGGA
TGTCCTTTCGGATGACGACGACGTCCTCCTCGTTGCCGGTTTGAATCCGA
TGGGGGAAGACGCACGGCCGGAGGAGGGCGCGACGACAGCCACGGTGACG
CGTCCTTCGAGTGGATCTGCCGCTGCTGCTGCTGCTATTAGTGCTGGCGC
TGCTGCAACTTCAGCAGCGCCCGCCCAGCGGCCGCAAACGCACCGGCGCC
GTGCCGCTGCCATGCCGTTCGGATTTGTCGGGCGTTGCGGATGCTGCGGC
AAGGCAGCGAGAGGCGGCGCAGGAGGAACGGCAAGGACTACGCCGCCGGA
C
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