mRNA_P-wetherbeei_contig13621.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13621.1.1
Unique NamemRNA_P-wetherbeei_contig13621.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13621.1.1 vs. uniprot
Match: A0A7X9AE49_9BURK (Signal recognition particle protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AE49_9BURK)

HSP 1 Score: 580 bits (1494), Expect = 4.780e-204
Identity = 289/444 (65.09%), Postives = 368/444 (82.88%), Query Frame = 1
Query:    1 MFEALTDRIGGVLGKLRGRGKLTEADVTEALREVRRALLEADVSLAVVKDFIAMVRERAVGEELWKSLTPGQLVVKHVRDCLIELIGGEASELIMAEEGPTIILMCGLNGAGKTTTSGKLGLYLKNKAHKPLLVATDVYRPAAIKQLETLGNQLHLPVFQMGDGVTPLEIAKGALEQAKANGNDVVIIDSAGRLHIDEALMSELKKTREEINPHEVLLVVDSMTGQDAVNIAQQFNEQIGITGVVMTKLDGDTRGGAALSVRHVTGRPIKFAGVGEKSTALELFHPDRMAGRILGMGDVMGLIEKAEQAISQEQAMDLEKKIREDNFTLEDFLAQMQQIKKLGSIKDLLGMLPGIGSAMKDLPVDEKQFRHLEAIIQSMTRKERRKPDLLNASRRKRIAKGSGTEVSDVNRLLKQFEMMRNMMRMIAGPKAKKGKLGLPFRLPF 1332
            MFE+L+DR+G +  KLRGRG+LTE DV EALREVRRALLEADVSL+VVKDF+A V+ERA+GEEL+KS+TPGQ VVK+VRD L+EL+GGEA+ L  +   PT+I++CGL+GAGKTT++ KL LYLK     P+LVATDVYRPAAI+QLE LG Q+ +PVFQ+G    P+EI++ A+ QA+  G DVV+ID+AGRLHID+ LM EL++ + E+ P E+LLVVD+MTGQDAV+IA+ FN+ +G+TGVVMTKLDGD RGGAALSVRHVTG P+KF GVGEK +ALE FHPDRMAGRILGMGD++ LIEKAEQA+ +E+A +LE+K+R     L D L QMQQI+K+G +KD+L M+PG+G+ +KDLPVDE Q + +EAIIQSMT  ER+ P +LNASR++R+A+GSG++VSD+NRLLKQFEMMR MM+ +     K+GK  +PFRLPF
Sbjct:    1 MFESLSDRLGAIFKKLRGRGRLTEEDVNEALREVRRALLEADVSLSVVKDFVARVKERALGEELFKSMTPGQQVVKYVRDALVELMGGEAARLSFSSRPPTVIMLCGLHGAGKTTSAAKLALYLKGAGRHPMLVATDVYRPAAIQQLEVLGKQIGVPVFQLGADRDPVEISRQAIAQARDGGRDVVLIDTAGRLHIDQDLMDELRRQKAEVKPDEILLVVDAMTGQDAVHIARDFNQALGLTGVVMTKLDGDARGGAALSVRHVTGAPLKFVGVGEKLSALEPFHPDRMAGRILGMGDMLSLIEKAEQAMDEEKAAELEQKLRTSRLDLNDLLDQMQQIRKMGPLKDILKMIPGLGNQLKDLPVDESQIKRIEAIIQSMTPAERQDPGILNASRKRRVARGSGSDVSDINRLLKQFEMMRKMMKGMGDMGRKRGKK-IPFRLPF 443          
BLAST of mRNA_P-wetherbeei_contig13621.1.1 vs. uniprot
Match: A0A410X0D7_9BACL (Signal recognition particle protein n=7 Tax=Paenibacillus TaxID=44249 RepID=A0A410X0D7_9BACL)

HSP 1 Score: 534 bits (1376), Expect = 5.750e-186
Identity = 281/450 (62.44%), Postives = 348/450 (77.33%), Query Frame = 1
Query:    4 FEALTDRIGGVLGKLRGRGKLTEADVTEALREVRRALLEADVSLAVVKDFIAMVRERAVGEELWKSLTPGQLVVKHVRDCLIELIGGEASELIMAEEGPTIILMCGLNGAGKTTTSGKLGLYLKNKAHKPLLVATDVYRPAAIKQLETLGNQLHLPVFQMGDGVTPLEIAKGALEQAKANGNDVVIIDSAGRLHIDEALMSELKKTREEINPHEVLLVVDSMTGQDAVNIAQQFNEQIGITGVVMTKLDGDTRGGAALSVRHVTGRPIKFAGVGEKSTALELFHPDRMAGRILGMGDVMGLIEKAEQAISQEQAMDLEKKIREDNFTLEDFLAQMQQIKKLGSIKDLLGMLPGIGS--AMKDLPVDEKQFRHLEAIIQSMTRKERRKPDLLNASRRKRIAKGSGTEVSDVNRLLKQFEMMRNMMRMIAG---PKAKKG--KLGLPFRLPF 1332
            FE LT R+ GV  KLRG+GKLTE DV+EALREVR ALLEADV+  VVKDFIA V+ERAVG+++ KS TPG +V+  V   L +L+GG  ++L  A + PT+I+M GL GAGKTTTSGKL   L+ + HKPLLVA D+YRPAAIKQL+ LG QL +PVF MGD V+P+EIAK  L+ AK N ND VI+D+AGRLHIDE LM ELK  RE + PHE LLVVD+MTGQDAVN+A+ F++Q+ +TGVV+TKLDGDTRGGAALSV+ VTG PIKFA +GEK  ALE F+P+RMA RILGMGD++ LIEKA+  I  ++A ++E+K+R   FT +DFL QM+Q+KKLG +  LL MLPG G    MKDL VD+KQ   +EAI++SMT++E+RKP+++NA+RRKRIA GSG  V DVNRLLKQFE MR MM+  +G   PKA K   KLG  F+ PF
Sbjct:    3 FEGLTGRLQGVFDKLRGKGKLTEEDVSEALREVRLALLEADVNFKVVKDFIAKVKERAVGQDVMKSFTPGMVVIDIVNKELTDLMGGTHTKLAKANKPPTVIMMVGLQGAGKTTTSGKLAKMLQKQNHKPLLVAGDIYRPAAIKQLQVLGEQLKVPVFSMGDQVSPVEIAKNGLQFAKDNNNDYVIVDTAGRLHIDETLMDELKNVREAVGPHETLLVVDAMTGQDAVNVAESFHKQLELTGVVLTKLDGDTRGGAALSVKAVTGCPIKFAAMGEKMDALEPFYPERMASRILGMGDMLTLIEKAQAGIDADKAKEMERKMRNAEFTFDDFLEQMEQVKKLGPLDQLLDMLPGAGKMKGMKDLKVDDKQMGRVEAIVKSMTKEEKRKPEIINANRRKRIALGSGNSVQDVNRLLKQFEDMRKMMKQFSGMMNPKAMKNMKKLGKGFKFPF 452          
BLAST of mRNA_P-wetherbeei_contig13621.1.1 vs. uniprot
Match: A0A3M8DWL6_9BACL (Signal recognition particle protein n=1 Tax=Brevibacillus fluminis TaxID=511487 RepID=A0A3M8DWL6_9BACL)

HSP 1 Score: 531 bits (1368), Expect = 2.510e-184
Identity = 271/434 (62.44%), Postives = 342/434 (78.80%), Query Frame = 1
Query:    4 FEALTDRIGGVLGKLRGRGKLTEADVTEALREVRRALLEADVSLAVVKDFIAMVRERAVGEELWKSLTPGQLVVKHVRDCLIELIGGEASELIMAEEGPTIILMCGLNGAGKTTTSGKLGLYLKNKAHKPLLVATDVYRPAAIKQLETLGNQLHLPVFQMGDGVTPLEIAKGALEQAKANGNDVVIIDSAGRLHIDEALMSELKKTREEINPHEVLLVVDSMTGQDAVNIAQQFNEQIGITGVVMTKLDGDTRGGAALSVRHVTGRPIKFAGVGEKSTALELFHPDRMAGRILGMGDVMGLIEKAEQAISQEQAMDLEKKIREDNFTLEDFLAQMQQIKKLGSIKDLLGMLPGIGSAMKDLPVDEKQFRHLEAIIQSMTRKERRKPDLLNASRRKRIAKGSGTEVSDVNRLLKQFEMMRNMMRMIAGPKAKKGK 1305
            FE+L  R+     KLRGRGK+ EA V EA+REVR ALLEADV+  VVKDF+A V+ERA+G+++ KSLTPGQ+V+K V + L EL+GG  +++ +A + PT+++M GL GAGKTTT+GKL  YL+ +  KPLLVA D+YRPAAIKQL+ LG Q+  PVF +GD V+P+EIAK ALE AKAN  D V++D+AGRLHIDEALM ELK+ RE   P E+LLVVD+MTGQDAVN+A  FN+Q+ +TGV++TKLDGDTRGGAALSV+ VTG+PIKFAG+GEK  ALE FHPDRMA RILGMGDV+ LIEKA++A+ +E+A  +EK++R+  FT + FL  MQQ++KLG ++DLLGMLPG+   MKDL VDEKQ    EAI+QSMT+ ER  PDLLNA+RRKRIA GSGT V +VNR +KQFE M+ MM+  +G   K  K
Sbjct:    3 FESLASRLQSAFDKLRGRGKIDEASVNEAMREVRLALLEADVNFKVVKDFVARVKERAIGQDVLKSLTPGQMVIKVVNEELTELMGGNVAKIAVAPKAPTVVMMVGLQGAGKTTTTGKLAKYLQKQNRKPLLVACDIYRPAAIKQLQVLGGQVGAPVFALGDKVSPVEIAKQALEHAKANHLDYVLLDTAGRLHIDEALMDELKQVREVAKPDEILLVVDAMTGQDAVNVADSFNQQLELTGVILTKLDGDTRGGAALSVKAVTGKPIKFAGMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQEAVDEEKAKQMEKQMRQGEFTFDMFLDSMQQMRKLGPLEDLLGMLPGMNK-MKDLKVDEKQLGRTEAIVQSMTKAERANPDLLNANRRKRIAAGSGTTVQEVNRFIKQFEEMKKMMKQFSGMSDKMNK 435          
BLAST of mRNA_P-wetherbeei_contig13621.1.1 vs. uniprot
Match: UPI0004062617 (signal recognition particle protein n=1 Tax=Fictibacillus gelatini TaxID=225985 RepID=UPI0004062617)

HSP 1 Score: 529 bits (1362), Expect = 6.000e-184
Identity = 276/443 (62.30%), Postives = 346/443 (78.10%), Query Frame = 1
Query:    4 FEALTDRIGGVLGKLRGRGKLTEADVTEALREVRRALLEADVSLAVVKDFIAMVRERAVGEELWKSLTPGQLVVKHVRDCLIELIGGEASELIMAEEGPTIILMCGLNGAGKTTTSGKLGLYLKNKAH-KPLLVATDVYRPAAIKQLETLGNQLHLPVFQMGDGVTPLEIAKGALEQAKANGNDVVIIDSAGRLHIDEALMSELKKTREEINPHEVLLVVDSMTGQDAVNIAQQFNEQIGITGVVMTKLDGDTRGGAALSVRHVTGRPIKFAGVGEKSTALELFHPDRMAGRILGMGDVMGLIEKAEQAISQEQAMDLEKKIREDNFTLEDFLAQMQQIKKLGSIKDLLGMLPGIGS--AMKDLPVDEKQFRHLEAIIQSMTRKERRKPDLLNASRRKRIAKGSGTEVSDVNRLLKQFEMMRNMMRMIAG-PKAKKGKLGLPF 1320
            FE L DR+   L K+RG+GK++EADV E +REVR ALLEADV+  VVKDFI  V ERAVG+E+  SLTPGQ VVK V D L  L+GGE S++ ++   PTII+M GL GAGKTT SGKL  +L+ + + KPLLVA D+YRPAAI QLETLG QL +PVF +GD V+P+EIA+ A+ +AK + ND VIID+AGRLHIDE LM EL + +E  NPHE+ LVVD+MTGQDAVN+AQ FNEQ+ +TG ++TKLDGDTRGGAALS++ VTG PIKF G+GEK  ALE FHPDRMA RILGMGDV+ LIEKA+ ++ +E+A +LEKK+R+ +FT +DFL QM Q+KKLG + +LLGMLPG      +K++ +DEKQ  H+EAIIQSMT+ ER +P+++NASRRKRIAKGSG  V +VNRL+KQFE M+ MM+ +AG  K KK    LPF
Sbjct:    3 FEGLADRLQNTLKKIRGKGKVSEADVKEMMREVRLALLEADVNFKVVKDFIKRVTERAVGQEVLSSLTPGQQVVKVVHDELTSLMGGEQSKIAVSNRPPTIIMMVGLQGAGKTTMSGKLANHLRKRHNRKPLLVAADIYRPAAINQLETLGKQLDIPVFSLGDKVSPVEIARQAIMKAKEDHNDYVIIDTAGRLHIDEELMDELSQVKEMANPHEIFLVVDAMTGQDAVNVAQSFNEQLALTGAILTKLDGDTRGGAALSIKAVTGLPIKFVGMGEKMDALEPFHPDRMASRILGMGDVLTLIEKAQTSVDEEKAKELEKKMRDMSFTFDDFLEQMGQVKKLGPLDELLGMLPGAAKMKGLKNIQIDEKQLSHVEAIIQSMTKHEREQPEIINASRRKRIAKGSGRTVQEVNRLIKQFEDMKKMMKQMAGMTKGKKKGFKLPF 445          
BLAST of mRNA_P-wetherbeei_contig13621.1.1 vs. uniprot
Match: A0A498R939_9FIRM (Signal recognition particle protein n=1 Tax=Lucifera butyrica TaxID=1351585 RepID=A0A498R939_9FIRM)

HSP 1 Score: 528 bits (1359), Expect = 1.840e-183
Identity = 269/446 (60.31%), Postives = 347/446 (77.80%), Query Frame = 1
Query:    1 MFEALTDRIGGVLGKLRGRGKLTEADVTEALREVRRALLEADVSLAVVKDFIAMVRERAVGEELWKSLTPGQLVVKHVRDCLIELIGGEASELIMAEEGPTIILMCGLNGAGKTTTSGKLGLYLKNKAHKPLLVATDVYRPAAIKQLETLGNQLHLPVFQMGDGVTPLEIAKGALEQAKANGNDVVIIDSAGRLHIDEALMSELKKTREEINPHEVLLVVDSMTGQDAVNIAQQFNEQIGITGVVMTKLDGDTRGGAALSVRHVTGRPIKFAGVGEKSTALELFHPDRMAGRILGMGDVMGLIEKAEQAISQEQAMDLEKKIREDNFTLEDFLAQMQQIKKLGSIKDLLGMLPGIGSAMK--DLPVDEKQFRHLEAIIQSMTRKERRKPDLLNASRRKRIAKGSGTEVSDVNRLLKQFEMMRNMMRMIAGPKAKKGKLGLPFRLPF 1332
            +FE L D++     KLRGRGKL+EADV EA+REVR ALLEADV+  VVKDFI+ ++ERAVG+E+ +SLTPGQ VVK V D L  L+GG  S + ++ + PT++++ GL GAGKTTT+GKL  YLK +  +PLLVA D+YRPAAIKQLE LG QL +PVF +GD   P+ IA+ A+++A A  ND+VIID+AGRLHI+E LM ELK  ++ + PHE+LLVVDSMTGQDAV +A+ FN+Q+G+ GV++TKLDGD RGGAALS++ VTG PIKFAG+GEK  ALE FHPDRMA RILGMGDV+ LIEKA+ AI  E+A ++EKK R++ FTL+DFL QM+Q++KLG +  +LGMLPG+G+  K  D+ +DEK+ + +EAII+SMT+KER+ P ++N SRRKRIA GSGT V +VN+LLKQF   R MM+ +   K K GK    FRLPF
Sbjct:    2 VFEGLADKLQQTFKKLRGRGKLSEADVNEAMREVRMALLEADVNFKVVKDFISRIKERAVGQEVMESLTPGQYVVKIVNDELTNLMGGTQSRITISSKPPTVVMLVGLQGAGKTTTAGKLAHYLKKQNKRPLLVAADIYRPAAIKQLEVLGEQLEIPVFSLGDRENPVTIAQKAIQRALAYANDIVIIDTAGRLHINEELMQELKSVKQAVKPHEILLVVDSMTGQDAVTVAENFNQQLGLDGVILTKLDGDARGGAALSIKAVTGCPIKFAGMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQTAIDLEKAQEMEKKFRKEEFTLDDFLDQMEQVRKLGPLDQILGMLPGMGNLKKLQDVKIDEKEIKRIEAIIRSMTKKERKDPAIINGSRRKRIALGSGTRVQEVNKLLKQFTEARKMMKKLQEMK-KSGKKNSGFRLPF 446          
BLAST of mRNA_P-wetherbeei_contig13621.1.1 vs. uniprot
Match: F5L7S4_CALTT (Signal recognition particle protein n=2 Tax=Caldalkalibacillus TaxID=379065 RepID=F5L7S4_CALTT)

HSP 1 Score: 528 bits (1359), Expect = 1.900e-183
Identity = 269/445 (60.45%), Postives = 352/445 (79.10%), Query Frame = 1
Query:    4 FEALTDRIGGVLGKLRGRGKLTEADVTEALREVRRALLEADVSLAVVKDFIAMVRERAVGEELWKSLTPGQLVVKHVRDCLIELIGGEASELIMAEEGPTIILMCGLNGAGKTTTSGKLGLYLKNKAHKPLLVATDVYRPAAIKQLETLGNQLHLPVFQMGDGVTPLEIAKGALEQAKANGNDVVIIDSAGRLHIDEALMSELKKTREEINPHEVLLVVDSMTGQDAVNIAQQFNEQIGITGVVMTKLDGDTRGGAALSVRHVTGRPIKFAGVGEKSTALELFHPDRMAGRILGMGDVMGLIEKAEQAISQEQAMDLEKKIREDNFTLEDFLAQMQQIKKLGSIKDLLGMLPGIGS--AMKDLPVDEKQFRHLEAIIQSMTRKERRKPDLLNASRRKRIAKGSGTEVSDVNRLLKQFEMMRNMMRMIAGPKAKKGKLGLPFRLPF 1332
            FE L DR+   L K+RG+GK+TEADV E +REVR ALLEADV+  VV+DF+  V+ERAVG+E+ KSLTPGQ V+K V + L  L+GGE ++L +++  PT+I+M GL GAGKTTT+GKL  YL+ +   PLLVA D+YRPAAIKQL+ LG Q+++PVF +GD  +P+ IAK A+EQAK   ND V+ID+AGRLHIDE LM+EL + +EE+ P E+LLVVD+MTGQDAVN+AQ FNEQ+ ITGV++TKLDGDTRGGAALSV+ VTG+PIKF G+GEK  ALE FHPDRMA RILGMGDV+ LIEKA++ + QE+A +LE+KIR+  FT +DFL Q++Q++ +G + +LL MLPG G    +KDL VDEK+ + +EAII+SMT++E++ P+++NASRRKRIA+GSGT V DVNRLLKQF+ M+ MM+ ++    KK K    F+ PF
Sbjct:    3 FEGLADRLQETLRKIRGKGKVTEADVKEMMREVRLALLEADVNFKVVRDFVNRVKERAVGQEVLKSLTPGQQVIKVVNEELTALMGGENAKLAVSQRPPTVIMMVGLQGAGKTTTTGKLAKYLQKQNRNPLLVAADIYRPAAIKQLQVLGEQINVPVFSLGDKESPVVIAKKAIEQAKEQHNDYVLIDTAGRLHIDETLMNELNQIKEEVRPDEILLVVDAMTGQDAVNVAQSFNEQLNITGVILTKLDGDTRGGAALSVKAVTGQPIKFVGMGEKLDALEPFHPDRMASRILGMGDVLTLIEKAQREVDQEKAKELERKIRKMEFTFDDFLEQLEQVRNMGPLDELLSMLPGAGKMKGLKDLKVDEKKLKQVEAIIRSMTKEEKQNPEIINASRRKRIAQGSGTSVQDVNRLLKQFQDMKKMMKQMSTMAGKKKKRK-GFKFPF 446          
BLAST of mRNA_P-wetherbeei_contig13621.1.1 vs. uniprot
Match: M8EFP7_9BACL (Signal recognition particle protein n=4 Tax=Brevibacillus borstelensis TaxID=45462 RepID=M8EFP7_9BACL)

HSP 1 Score: 528 bits (1360), Expect = 2.610e-183
Identity = 270/445 (60.67%), Postives = 346/445 (77.75%), Query Frame = 1
Query:    4 FEALTDRIGGVLGKLRGRGKLTEADVTEALREVRRALLEADVSLAVVKDFIAMVRERAVGEELWKSLTPGQLVVKHVRDCLIELIGGEASELIMAEEGPTIILMCGLNGAGKTTTSGKLGLYLKNKAHKPLLVATDVYRPAAIKQLETLGNQLHLPVFQMGDGVTPLEIAKGALEQAKANGNDVVIIDSAGRLHIDEALMSELKKTREEINPHEVLLVVDSMTGQDAVNIAQQFNEQIGITGVVMTKLDGDTRGGAALSVRHVTGRPIKFAGVGEKSTALELFHPDRMAGRILGMGDVMGLIEKAEQAISQEQAMDLEKKIREDNFTLEDFLAQMQQIKKLGSIKDLLGMLPGIGSAMKDLPVDEKQFRHLEAIIQSMTRKERRKPDLLNASRRKRIAKGSGTEVSDVNRLLKQFEMMRNMMRMIAG------PKAKKGKLGLPF 1320
            FE+L  R+     KLRGRGK+ EA V+EA+REVR ALLEADV+  VVKDF+A V+ERAVG+E+ KSLTPGQ+V+K V + LIEL+GG  ++L  +   PT+++M GL GAGKTTT+GKL  YL+ +  KPLLVA D+YRPAAIKQL+ LG+QL++PVF +GD V+P+EIAK A++ AKAN  D VIID+AGRLHIDEALM ELK+ RE   P E+LLVVD+MTGQDAVN+A+ FN Q+ +TGV++TKLDGDTRGGAALSV+ VTG+PIKFA +GEK  ALE FHPDRMA RILGMGDV+ LIEKA++A+ +E+A ++E+++R+  FT + FL  MQQ++ LG  +DLLGM+PG+      + VDEKQ   +EAI +SMT++ER  P+LLNASRRKRIA GSGT + +VNR +KQF+ M+ MM+   G       KAKK   GLPF
Sbjct:    3 FESLASRLQSAFDKLRGRGKIDEAVVSEAMREVRLALLEADVNFKVVKDFVARVKERAVGQEVLKSLTPGQMVIKIVNEELIELMGGNVAQLAASHRPPTVVMMAGLQGAGKTTTTGKLAKYLQKQNRKPLLVAADIYRPAAIKQLQVLGDQLNVPVFSLGDQVSPVEIAKQAIDHAKANHLDYVIIDTAGRLHIDEALMEELKQVREVAKPDEILLVVDAMTGQDAVNVAESFNSQLELTGVILTKLDGDTRGGAALSVKAVTGKPIKFAAMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQEAVDEEKAKEMERQMRQGEFTFDMFLDAMQQMRNLGPFEDLLGMMPGMNKMKGSVKVDEKQIARVEAIAKSMTKEERSNPELLNASRRKRIAAGSGTTIQEVNRFIKQFDEMKKMMKQFTGVADKMKKKAKKKGFGLPF 447          
BLAST of mRNA_P-wetherbeei_contig13621.1.1 vs. uniprot
Match: A0A1E5G5V1_9BACL (Signal recognition particle protein n=1 Tax=Desulfuribacillus alkaliarsenatis TaxID=766136 RepID=A0A1E5G5V1_9BACL)

HSP 1 Score: 526 bits (1355), Expect = 6.930e-183
Identity = 272/446 (60.99%), Postives = 347/446 (77.80%), Query Frame = 1
Query:    1 MFEALTDRIGGVLGKLRGRGKLTEADVTEALREVRRALLEADVSLAVVKDFIAMVRERAVGEELWKSLTPGQLVVKHVRDCLIELIGGEASELIMAEEGPTIILMCGLNGAGKTTTSGKLGLYLKNKAHKPLLVATDVYRPAAIKQLETLGNQLHLPVFQMGDGVTPLEIAKGALEQAKANGNDVVIIDSAGRLHIDEALMSELKKTREEINPHEVLLVVDSMTGQDAVNIAQQFNEQIGITGVVMTKLDGDTRGGAALSVRHVTGRPIKFAGVGEKSTALELFHPDRMAGRILGMGDVMGLIEKAEQAISQEQAMDLEKKIREDNFTLEDFLAQMQQIKKLGSIKDLLGMLPGIGS--AMKDLPVDEKQFRHLEAIIQSMTRKERRKPDLLNASRRKRIAKGSGTEVSDVNRLLKQFEMMRNMMRMIAGPKAKKGKLGLPFRLPF 1332
            +F+ L DR+     KL+ +GKLTEADV EA+REVR ALLEADV+  +VK FI  V+ERAVG+E+  SLTPGQ V+K V + L EL+GG  S+L ++   PTII+M GL GAGKTTTSGKL  +LK +  +PLLVA D+YRPAAIKQL+ LG QL +PVF MGD  +P+ IAK A+E AK +GND VIID+AGRLHIDE LM EL   R+ ++P E+LLVVD+MTGQDAVN+A+ FNEQ+ ++GVV+TKLDGDTRGGAALSV+ VTG PIKFAG+GEK  ALE FHPDRMA RILGMGDV+ LIEKA+  I +E+A +LEKK+R  +FT +DFL QM+Q++ +G +  +LGM+PG      +K++ VDEKQ  H+EAII+SMT++E++KP+++NASRRKRIA GSGT+V +VNRLLKQF  M+ MM+   G +  KGK    F+LPF
Sbjct:    2 VFQGLADRLQQTFSKLKRKGKLTEADVKEAMREVRLALLEADVNFKIVKQFIDKVKERAVGQEVLNSLTPGQQVIKLVNEELTELMGGTQSKLAISSSPPTIIMMVGLQGAGKTTTSGKLANHLKKQNRRPLLVACDIYRPAAIKQLQVLGEQLDIPVFNMGDKNSPVNIAKAAVEHAKHHGNDYVIIDTAGRLHIDEKLMDELVAVRDNVSPDEILLVVDAMTGQDAVNVAESFNEQLSLSGVVLTKLDGDTRGGAALSVKSVTGCPIKFAGMGEKLDALEPFHPDRMASRILGMGDVLSLIEKAQTNIDEEKAKELEKKMRNADFTFDDFLDQMEQVRNMGPLDQVLGMMPGANKIKGLKNMQVDEKQLTHVEAIIKSMTKEEKQKPEIINASRRKRIAAGSGTQVQEVNRLLKQFSDMKKMMKQFTGSQKGKGKK--KFKLPF 445          
BLAST of mRNA_P-wetherbeei_contig13621.1.1 vs. uniprot
Match: A0A4Q1TAE6_9BACL (Signal recognition particle protein n=2 Tax=unclassified Ammoniphilus TaxID=2618262 RepID=A0A4Q1TAE6_9BACL)

HSP 1 Score: 526 bits (1354), Expect = 1.210e-182
Identity = 272/450 (60.44%), Postives = 355/450 (78.89%), Query Frame = 1
Query:    4 FEALTDRIGGVLGKLRGRGKLTEADVTEALREVRRALLEADVSLAVVKDFIAMVRERAVGEELWKSLTPGQLVVKHVRDCLIELIGGEASELIMAEEGPTIILMCGLNGAGKTTTSGKLGLYLKNKAHKPLLVATDVYRPAAIKQLETLGNQLHLPVFQMGDGVTPLEIAKGALEQAKANGNDVVIIDSAGRLHIDEALMSELKKTREEINPHEVLLVVDSMTGQDAVNIAQQFNEQIGITGVVMTKLDGDTRGGAALSVRHVTGRPIKFAGVGEKSTALELFHPDRMAGRILGMGDVMGLIEKAEQAISQEQAMDLEKKIREDNFTLEDFLAQMQQIKKLGSIKDLLGMLPGIGS--AMKDLPVDEKQFRHLEAIIQSMTRKERRKPDLL-NASRRKRIAKGSGTEVSDVNRLLKQFEMMRNMMR----MIAGPKAKKGKLGLPFRLPF 1332
            FE+L +R+     +LRGRGK+TE DV E +REVR ALLEADV+  VVK+F+A V+ERA+G+E+ KSL+PGQ V+K V D L EL+GG  S++  A + PT+++M GL GAGKTTT+GKL  +L  +  KPLLVA D+YRPAAIKQL+ LG QL +PVF +GD V+P+EIAK A+E+AKA+ +D V+ID+AGRLHIDE LM ELK  R  +NPHE+LLVVD+MTGQDAVN+A+ FN Q+ +TGVV+TKLDGDTRGGAALSV+ VTG+PIKFAG+GEK  ALE FHPDRMA RILGMGDV+ LIEKA++A+ QE+A ++E+K+R+  FT EDFL QM Q++K+G ++DLLGM+PG+     M+DL +D+K    +EAI++SMT +E++ P+LL N++R+KRIAKGSGT V +VNR +KQFE MR MM+    M    K KKGK G+ F+ PF
Sbjct:    3 FESLANRLQATFDRLRGRGKVTEDDVNEMMREVRLALLEADVNFKVVKEFVAKVKERAIGQEVLKSLSPGQQVIKVVNDELTELMGGTQSKIAHANKPPTVVMMVGLQGAGKTTTTGKLAKHLLKQNRKPLLVAGDIYRPAAIKQLQVLGEQLKVPVFSLGDQVSPVEIAKQAIEKAKADHHDYVLIDTAGRLHIDETLMDELKDIRSSVNPHEILLVVDAMTGQDAVNVAESFNSQLELTGVVLTKLDGDTRGGAALSVKAVTGKPIKFAGMGEKMDALEPFHPDRMASRILGMGDVLSLIEKAQEAVDQEKAKEMERKLRKAEFTFEDFLEQMAQVRKMGPLEDLLGMIPGMNKMKGMQDLKIDDKAINRVEAIVKSMTTEEKQNPELLKNSNRKKRIAKGSGTTVQEVNRFIKQFEDMRKMMKQFGKMADQAKKKKGK-GM-FKFPF 450          
BLAST of mRNA_P-wetherbeei_contig13621.1.1 vs. uniprot
Match: UPI001AE4B75E (signal recognition particle protein n=1 Tax=Ammoniphilus resinae TaxID=861532 RepID=UPI001AE4B75E)

HSP 1 Score: 526 bits (1354), Expect = 1.260e-182
Identity = 273/450 (60.67%), Postives = 351/450 (78.00%), Query Frame = 1
Query:    4 FEALTDRIGGVLGKLRGRGKLTEADVTEALREVRRALLEADVSLAVVKDFIAMVRERAVGEELWKSLTPGQLVVKHVRDCLIELIGGEASELIMAEEGPTIILMCGLNGAGKTTTSGKLGLYLKNKAHKPLLVATDVYRPAAIKQLETLGNQLHLPVFQMGDGVTPLEIAKGALEQAKANGNDVVIIDSAGRLHIDEALMSELKKTREEINPHEVLLVVDSMTGQDAVNIAQQFNEQIGITGVVMTKLDGDTRGGAALSVRHVTGRPIKFAGVGEKSTALELFHPDRMAGRILGMGDVMGLIEKAEQAISQEQAMDLEKKIREDNFTLEDFLAQMQQIKKLGSIKDLLGMLPGIGSA--MKDLPVDEKQFRHLEAIIQSMTRKERRKPDLLNA-SRRKRIAKGSGTEVSDVNRLLKQFEMMRNMMR----MIAGPKAKKGKLGLPFRLPF 1332
            FE+L +R+     +LRG+GK+TE DV E +REVR ALLEADV+  VVK+FIA V+ERA+G+E+ KSLTPGQ V+K V D L +L+GGE S++ +A + PT+++M GL GAGKTTT+GKL  YL+ +  +PLLVA D+YRPAAIKQL+ LG QL +PVF +GD V+P+EIA  A+EQAKA  ND V+ID+AGRLHIDE LM ELK  R  +NPHE+LLVVD+MTGQDAVN+A+ FN+Q+ ++GVV+TKLDGDTRGGAALSV+ VTG+PIKFAG+GEK  ALE FHP+RMA RILGMGDV+ LIEKA+  + Q++A +LE+K+R+  FT EDFL QM Q++KLG + DLLGMLPG+     MKDL VDEK    +EAI++SMT++E++ P+LL   SR++RIA GSGT + +VNR +KQFE MR MM+    M    K KKGK GL  + PF
Sbjct:    3 FESLANRLQATFDRLRGKGKVTEDDVNEMMREVRLALLEADVNFKVVKEFIAKVKERAIGQEVLKSLTPGQQVIKVVNDELTQLMGGEQSKIALASKAPTVVMMVGLQGAGKTTTTGKLAKYLQKQNRRPLLVACDIYRPAAIKQLQVLGEQLKVPVFSLGDQVSPVEIANQAIEQAKAEHNDYVLIDTAGRLHIDEKLMDELKDIRATVNPHEILLVVDAMTGQDAVNVAESFNQQLELSGVVLTKLDGDTRGGAALSVKAVTGKPIKFAGMGEKMDALEPFHPERMASRILGMGDVLTLIEKAQANVDQDKAKELERKMRKAEFTFEDFLEQMAQVRKLGPLDDLLGMLPGMNKVKGMKDLKVDEKALNRVEAIVKSMTKEEKQNPELLKTTSRKRRIAHGSGTSIQEVNRFIKQFEEMRKMMKQFTKMTDQAKKKKGK-GLFGKFPF 451          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13621.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9AE49_9BURK4.780e-20465.09Signal recognition particle protein n=1 Tax=Burkho... [more]
A0A410X0D7_9BACL5.750e-18662.44Signal recognition particle protein n=7 Tax=Paenib... [more]
A0A3M8DWL6_9BACL2.510e-18462.44Signal recognition particle protein n=1 Tax=Brevib... [more]
UPI00040626176.000e-18462.30signal recognition particle protein n=1 Tax=Fictib... [more]
A0A498R939_9FIRM1.840e-18360.31Signal recognition particle protein n=1 Tax=Lucife... [more]
F5L7S4_CALTT1.900e-18360.45Signal recognition particle protein n=2 Tax=Caldal... [more]
M8EFP7_9BACL2.610e-18360.67Signal recognition particle protein n=4 Tax=Brevib... [more]
A0A1E5G5V1_9BACL6.930e-18360.99Signal recognition particle protein n=1 Tax=Desulf... [more]
A0A4Q1TAE6_9BACL1.210e-18260.44Signal recognition particle protein n=2 Tax=unclas... [more]
UPI001AE4B75E1.260e-18260.67signal recognition particle protein n=1 Tax=Ammoni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13621contigP-wetherbeei_contig13621:282..1616 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121091.AUMP01000001_gene135
Preferred nameffh
PFAMsSRP54,SRP54_N,SRP_SPB
Model size1335
Max annot lvl91061|Bacilli
KEGG koko:K03106
KEGG TC3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.83e-185
EggNOG OGsCOG0541@1|root,COG0541@2|Bacteria,1TP06@1239|Firmicutes,4H9T4@91061|Bacilli
EC3.6.5.4
DescriptionInvolved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Cds size1335
COG categoryU
BRITEko00000,ko00001,ko00002,ko01000,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185993.1563385-CDS-P-wetherbeei_contig13621:281..16161683185993.1563385-CDS-P-wetherbeei_contig13621:281..1616Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13621 282..1616 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13621.1.1prot_P-wetherbeei_contig13621.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13621 282..1616 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13621.1.1

>prot_P-wetherbeei_contig13621.1.1 ID=prot_P-wetherbeei_contig13621.1.1|Name=mRNA_P-wetherbeei_contig13621.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=445bp
MFEALTDRIGGVLGKLRGRGKLTEADVTEALREVRRALLEADVSLAVVKD
FIAMVRERAVGEELWKSLTPGQLVVKHVRDCLIELIGGEASELIMAEEGP
TIILMCGLNGAGKTTTSGKLGLYLKNKAHKPLLVATDVYRPAAIKQLETL
GNQLHLPVFQMGDGVTPLEIAKGALEQAKANGNDVVIIDSAGRLHIDEAL
MSELKKTREEINPHEVLLVVDSMTGQDAVNIAQQFNEQIGITGVVMTKLD
GDTRGGAALSVRHVTGRPIKFAGVGEKSTALELFHPDRMAGRILGMGDVM
GLIEKAEQAISQEQAMDLEKKIREDNFTLEDFLAQMQQIKKLGSIKDLLG
MLPGIGSAMKDLPVDEKQFRHLEAIIQSMTRKERRKPDLLNASRRKRIAK
GSGTEVSDVNRLLKQFEMMRNMMRMIAGPKAKKGKLGLPFRLPF*
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mRNA from alignment at P-wetherbeei_contig13621:282..1616+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13621.1.1 ID=mRNA_P-wetherbeei_contig13621.1.1|Name=mRNA_P-wetherbeei_contig13621.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1335bp|location=Sequence derived from alignment at P-wetherbeei_contig13621:282..1616+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTTTGAAGCATTAACCGATAGAATAGGCGGCGTCCTCGGAAAACTCCG GGGCCGCGGCAAGCTGACCGAAGCTGATGTCACCGAGGCTCTCCGCGAGG TCCGCCGTGCTTTGCTCGAGGCCGACGTAAGCCTGGCAGTCGTCAAAGAC TTCATCGCGATGGTGCGTGAGCGCGCCGTCGGTGAAGAGCTATGGAAGAG CCTGACGCCCGGCCAACTCGTGGTAAAGCATGTGCGCGACTGTCTGATCG AGCTCATCGGTGGCGAAGCCAGCGAGCTGATTATGGCCGAGGAAGGCCCG ACCATCATTTTGATGTGCGGCCTCAACGGCGCCGGTAAGACGACGACCAG CGGAAAACTGGGCCTCTACCTCAAGAATAAAGCTCATAAGCCGCTGCTGG TGGCCACCGACGTCTATCGTCCGGCCGCTATTAAGCAGCTGGAGACTCTC GGAAACCAGCTCCATCTTCCGGTCTTCCAGATGGGGGACGGAGTCACCCC GCTCGAAATCGCAAAGGGCGCGCTCGAGCAGGCCAAAGCCAACGGCAATG ACGTCGTCATCATCGACAGCGCGGGTCGTCTCCACATCGACGAAGCCCTG ATGAGCGAGCTTAAGAAGACGCGTGAGGAAATCAACCCTCACGAGGTACT GCTTGTCGTCGACTCGATGACCGGCCAGGACGCCGTCAATATCGCTCAGC AGTTCAACGAACAAATCGGTATCACCGGCGTCGTGATGACCAAGCTCGAC GGCGATACGCGCGGCGGCGCCGCTCTCTCCGTGCGCCACGTTACGGGCCG CCCCATCAAGTTTGCCGGTGTCGGCGAGAAGTCGACGGCGCTAGAACTCT TCCACCCCGATCGTATGGCCGGACGCATCCTCGGTATGGGCGACGTGATG GGCCTGATCGAGAAGGCCGAGCAGGCCATCTCCCAAGAGCAGGCGATGGA CCTCGAGAAAAAGATCCGAGAAGACAACTTTACTCTCGAAGATTTCCTGG CTCAGATGCAACAAATCAAAAAGCTGGGTTCAATTAAGGATCTTCTGGGA ATGCTGCCCGGAATAGGTTCTGCAATGAAAGACTTACCGGTTGACGAGAA GCAATTCCGCCACCTGGAGGCCATTATTCAGTCGATGACCCGAAAAGAAC GTAGAAAGCCGGATTTGCTCAATGCTTCGCGCCGAAAACGTATCGCTAAG GGTTCGGGTACTGAAGTGTCAGACGTGAACCGTCTGCTCAAACAGTTTGA GATGATGCGGAATATGATGCGAATGATCGCAGGCCCCAAAGCCAAGAAGG GGAAGCTCGGCCTCCCCTTCCGTCTTCCGTTTTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13621:282..1616+

>mRNA_P-wetherbeei_contig13621.1.1 ID=mRNA_P-wetherbeei_contig13621.1.1|Name=mRNA_P-wetherbeei_contig13621.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1335bp|location=Sequence derived from alignment at P-wetherbeei_contig13621:282..1616+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTTTGAAGCATTAACCGATAGAATAGGCGGCGTCCTCGGAAAACTCCG
GGGCCGCGGCAAGCTGACCGAAGCTGATGTCACCGAGGCTCTCCGCGAGG
TCCGCCGTGCTTTGCTCGAGGCCGACGTAAGCCTGGCAGTCGTCAAAGAC
TTCATCGCGATGGTGCGTGAGCGCGCCGTCGGTGAAGAGCTATGGAAGAG
CCTGACGCCCGGCCAACTCGTGGTAAAGCATGTGCGCGACTGTCTGATCG
AGCTCATCGGTGGCGAAGCCAGCGAGCTGATTATGGCCGAGGAAGGCCCG
ACCATCATTTTGATGTGCGGCCTCAACGGCGCCGGTAAGACGACGACCAG
CGGAAAACTGGGCCTCTACCTCAAGAATAAAGCTCATAAGCCGCTGCTGG
TGGCCACCGACGTCTATCGTCCGGCCGCTATTAAGCAGCTGGAGACTCTC
GGAAACCAGCTCCATCTTCCGGTCTTCCAGATGGGGGACGGAGTCACCCC
GCTCGAAATCGCAAAGGGCGCGCTCGAGCAGGCCAAAGCCAACGGCAATG
ACGTCGTCATCATCGACAGCGCGGGTCGTCTCCACATCGACGAAGCCCTG
ATGAGCGAGCTTAAGAAGACGCGTGAGGAAATCAACCCTCACGAGGTACT
GCTTGTCGTCGACTCGATGACCGGCCAGGACGCCGTCAATATCGCTCAGC
AGTTCAACGAACAAATCGGTATCACCGGCGTCGTGATGACCAAGCTCGAC
GGCGATACGCGCGGCGGCGCCGCTCTCTCCGTGCGCCACGTTACGGGCCG
CCCCATCAAGTTTGCCGGTGTCGGCGAGAAGTCGACGGCGCTAGAACTCT
TCCACCCCGATCGTATGGCCGGACGCATCCTCGGTATGGGCGACGTGATG
GGCCTGATCGAGAAGGCCGAGCAGGCCATCTCCCAAGAGCAGGCGATGGA
CCTCGAGAAAAAGATCCGAGAAGACAACTTTACTCTCGAAGATTTCCTGG
CTCAGATGCAACAAATCAAAAAGCTGGGTTCAATTAAGGATCTTCTGGGA
ATGCTGCCCGGAATAGGTTCTGCAATGAAAGACTTACCGGTTGACGAGAA
GCAATTCCGCCACCTGGAGGCCATTATTCAGTCGATGACCCGAAAAGAAC
GTAGAAAGCCGGATTTGCTCAATGCTTCGCGCCGAAAACGTATCGCTAAG
GGTTCGGGTACTGAAGTGTCAGACGTGAACCGTCTGCTCAAACAGTTTGA
GATGATGCGGAATATGATGCGAATGATCGCAGGCCCCAAAGCCAAGAAGG
GGAAGCTCGGCCTCCCCTTCCGTCTTCCGTTTTAA
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