mRNA_P-wetherbeei_contig1362.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1362.2.1 vs. uniprot
Match: A0A836CKX9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKX9_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.110e-49 Identity = 80/118 (67.80%), Postives = 103/118 (87.29%), Query Frame = 1
Query: 4 FRATHRRENAHEDGVWSVFWTSRGQILSGSVDETARIWSDDLTPDAVLGGHRLSVVSVKATSSGTAAVTSSMDSCLRFWNLDTGARTATIEAKPVEAWTLDISPNDQLLAAGTERGAV 357
+RATHR+E AHE+G+WSV WT++ QILSGSVDE AR+WSD L+P VLGGHRL VVS+KA + G+ AVTSS+DSCLRFW+L++G +T TI+A PVEAW++D+SPN +LLAAGT++GAV
Sbjct: 2 YRATHRQEGAHEEGIWSVCWTAKDQILSGSVDERARVWSDTLSPGHVLGGHRLGVVSIKADAEGSVAVTSSVDSCLRFWDLESGTKTNTIDAGPVEAWSVDMSPNGKLLAAGTQQGAV 119
BLAST of mRNA_P-wetherbeei_contig1362.2.1 vs. uniprot
Match: D8LSR1_ECTSI (ANAPC4_WD40 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSR1_ECTSI) HSP 1 Score: 153 bits (386), Expect = 4.820e-41 Identity = 71/119 (59.66%), Postives = 93/119 (78.15%), Query Frame = 1
Query: 4 FRATHRRENAHEDGVWSVFWTSRGQILSGSVDETARIWSDDLTPDAVLGGHRLSVVSVKATSSGTAAVTSSMDSCLRFWNLDTGARTATIEAKPVEAWTLDISPNDQLLAAGTERGAVN 360
+RATHR ENAHE+G+WSV WT ILSGSVDE AR+W +L P L GHRL V+SV+A + G AV+SS+DSC+RFW+L++G +TA E PVEAWTL +S +D+LLA+GT++G+VN
Sbjct: 2 YRATHRSENAHEEGIWSVAWTEADNILSGSVDERARVWCSELAPVHSLNGHRLGVLSVRAFNHGKEAVSSSIDSCIRFWDLESGEQTAVEEPGPVEAWTLAVSTDDKLLASGTQKGSVN 120
BLAST of mRNA_P-wetherbeei_contig1362.2.1 vs. uniprot
Match: A0A6V1M8K3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M8K3_HETAK) HSP 1 Score: 143 bits (360), Expect = 2.620e-37 Identity = 67/111 (60.36%), Postives = 85/111 (76.58%), Query Frame = 1
Query: 31 AHEDGVWSVFWTSRGQILSGSVDETARIWSDDLTPDAVLGGHRLSVVSVKATSSGTAAVTSSMDSCLRFWNLDTGARTATIEAKPVEAWTLDISPNDQLLAAGTERGAVNL 363
AH DG+WSV WTS+ QIL+GSVDE A+ W+ DL GGHRL V+SV+ S+GT AVTSS+DS LRFW+LD G +I+A PVEAW+ +SP D+L+AAG++RGAVNL
Sbjct: 1 AHADGIWSVAWTSKNQILTGSVDENAKSWNTDLQALHTFGGHRLGVISVQTNSTGTGAVTSSIDSVLRFWDLDNGQEDGSIDAGPVEAWSCALSPTDELVAAGSQRGAVNL 111
BLAST of mRNA_P-wetherbeei_contig1362.2.1 vs. uniprot
Match: A0A7S2B7M3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7M3_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.790e-32 Identity = 61/123 (49.59%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 1 QFRATHRRENAHEDGVWSVFWTSRGQILSGSVDETARIWSDDLTPDA--VLGGHRLSVVSVKATSSGTAAVTSSMDSCLRFWNLDTGARTATIEAKPVEAWTLDISPNDQLLAAGTERGAVNL 363
QF+ H +E+AH+DG+WSV WT+ +I+SGSVDET ++W L D GHRL VVSV + GT SS+DS +RFW+L+TG +A+I+ +EAW+L +SP+D+ LA G +RGAVN+
Sbjct: 12 QFQTIHGKEHAHQDGIWSVVWTTNNKIISGSVDETVKVWDTALNSDQGKSFEGHRLGVVSVAVNTEGTWCACSSIDSVIRFWDLETGETSASIDEGALEAWSLALSPHDKFLATGAQRGAVNI 134
BLAST of mRNA_P-wetherbeei_contig1362.2.1 vs. uniprot
Match: A0A7S2FTM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FTM4_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.190e-31 Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 19 RRENAHEDGVWSVFWTSRGQILSGSVDETARIWSDDLTPD-AVLGGHRLSVVSVKATSSGTAAVTSSMDSCLRFWNLDTGARTATIEAKPVEAWTLDISPNDQLLAAGTERGAVNL 363
R + HEDGVWSV WTS G+++SGSVDET ++W DL + A +GGHRL V+S S+G SS+D+ +R W+L++ T TI+A P+EAW+L +S ND ++A GT GAVN+
Sbjct: 1 RHDTCHEDGVWSVAWTSAGKLVSGSVDETVKVWDGDLKAEGAPMGGHRLGVISAVPNSTGQWCACSSIDNTIRLWDLESRQLTRTIDAGPLEAWSLALSSNDAMVATGTHYGAVNV 116
BLAST of mRNA_P-wetherbeei_contig1362.2.1 vs. uniprot
Match: A0A7S0TNL6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TNL6_HEMAN) HSP 1 Score: 112 bits (281), Expect = 1.450e-26 Identity = 55/125 (44.00%), Postives = 79/125 (63.20%), Query Frame = 1
Query: 13 THRRENAHEDGVWSVFWTSRGQILSGSVDETARIWSDDLTPDAV--------LGGHRLSVVSVKATSSGTAAVTSSMDSCLRFWNLDTGARTATIEAKPVEAWTLDISPNDQLLAAGTERGAVNL 363
T+R+ENAHED VWSV WT+ +I++GS+DET ++W+ +V GH L VVS+ A++ G SS+D LR WNLD + I+ PVEAWT+ + P QL+AAG++ G+VN+
Sbjct: 18 TNRKENAHEDSVWSVLWTNDDKIVTGSIDETVKVWTPKTETSSVPKLEEASTFTGHFLGVVSLSASADGRLCACSSLDGRLRIWNLDEKSLVKLIDPGPVEAWTVAVHPQGQLVAAGSQTGSVNV 142
BLAST of mRNA_P-wetherbeei_contig1362.2.1 vs. uniprot
Match: A0A3R7W5G8_9STRA (eIF2A domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7W5G8_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.380e-23 Identity = 57/124 (45.97%), Postives = 80/124 (64.52%), Query Frame = 1
Query: 4 FRATHRRENAHEDGVWSVFWTSRGQILSGSVDETARIWSDDLTPDAV-----LGGHRLSVVSVKATSSGTAAVTSSMDSCLRFWNLDTGARTATIEAKPVEAWTLDISPNDQLLAAGTERGAVN 360
+RA+ + NAH DG+WS FWTS +IL+GSVDE A++W D+T DAV GH L +S+ +GT AVTSS+D +R NL +GA TI+A P E W L SP++ L +G+++G +N
Sbjct: 154 YRASIQFPNAHSDGIWSTFWTSNDKILTGSVDEVAKVW--DVTEDAVSISQQYPGHVLGTISIVGNKAGTHAVTSSLDCQIRVLNLSSGAVEKTIDAGPGELWQLAYSPDETKLVSGSQQGKIN 275
BLAST of mRNA_P-wetherbeei_contig1362.2.1 vs. uniprot
Match: A0A7S0YHF0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YHF0_9CRYP) HSP 1 Score: 107 bits (266), Expect = 2.090e-23 Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query: 13 THRRENAHEDGVWSVFWTSRGQILSGSVDETARIWSDDLTPDAV--------LGGHRLSVVSVKATSSGTAAVTSSMDSCLRFWNLDTGARTATIEAKPVEAWTLDISPNDQLLAAGTERGAVNL 363
T R+E AHED W+V WT+ +I+SGS+DET ++W+ V GH L VVS+ A+S G SS+D LR WNLD + I+ PVEAWT+ + P QL+AAG++ G VN+
Sbjct: 9 TSRKEQAHEDSAWAVLWTNDDKIVSGSIDETVKVWAPKTETSPVPKLEEVSTFTGHFLGVVSMSASSDGRLCACSSLDGRLRIWNLDDKSLVKLIDPGPVEAWTVAMHPQGQLVAAGSQTGNVNI 133
BLAST of mRNA_P-wetherbeei_contig1362.2.1 vs. uniprot
Match: A0A6J0JC84_9PASS (WD repeat-containing protein 61-like n=3 Tax=Neognathae TaxID=8825 RepID=A0A6J0JC84_9PASS) HSP 1 Score: 102 bits (253), Expect = 8.770e-23 Identity = 51/129 (39.53%), Postives = 79/129 (61.24%), Query Frame = 1
Query: 1 QFRATHRRENAHEDGVWSVFWTSRGQ-----ILSGSVDETARIWS---DDLTPDAVLGGHRLSVVSVKATSSGTAAVTSSMDSCLRFWNLDTGARTATIEAKPVEAWTLDISPNDQLLAAGTERGAVNL 363
Q+ ++E AH+D +WSV W ++SGS+D+ ++W + L L GH+L VVSV + +GT A +SS+D+ +R W+LDTG + +I+A PV+AW+L SP+ Q LA G+ G VN+
Sbjct: 4 QYGILFKQEQAHDDAIWSVAWGKNKNDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGTIAASSSLDAHIRLWDLDTGKQVKSIDAGPVDAWSLAFSPDSQYLATGSHVGKVNI 132
BLAST of mRNA_P-wetherbeei_contig1362.2.1 vs. uniprot
Match: A0A0L0HKJ6_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HKJ6_SPIPD) HSP 1 Score: 103 bits (257), Expect = 3.260e-22 Identity = 52/117 (44.44%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 25 ENAHEDGVWSVFWTSRG-QILSGSVDETARIWSDDL-TPDAVLGGHRLSVVSVKATSSGTAAVTSSMDSCLRFWNLDTGART--ATIEAKPVEAWTLDISPNDQLLAAGTERGAVNL 363
+NAH+DG+WSV W+ RG +I++GSVD+T ++W+ D P GH+L V+S+ + G+ A ++S+DS +RFW+L +T TIEA PVEAWT SP+ + +A G+ G VN+
Sbjct: 9 KNAHDDGIWSVGWSKRGNKIVTGSVDDTVKVWAGDTYVPLHTFEGHQLGVISIDISPDGSTAASTSLDSQIRFWDLIHHTKTDDKTIEAGPVEAWTAVYSPDGRHVATGSHNGNVNI 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1362.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1362.2.1 >prot_P-wetherbeei_contig1362.2.1 ID=prot_P-wetherbeei_contig1362.2.1|Name=mRNA_P-wetherbeei_contig1362.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=295bp QFRATHRRENAHEDGVWSVFWTSRGQILSGSVDETARIWSDDLTPDAVLGback to top mRNA from alignment at P-wetherbeei_contig1362:1047..2900+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1362.2.1 ID=mRNA_P-wetherbeei_contig1362.2.1|Name=mRNA_P-wetherbeei_contig1362.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1854bp|location=Sequence derived from alignment at P-wetherbeei_contig1362:1047..2900+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1362:1047..2900+ >mRNA_P-wetherbeei_contig1362.2.1 ID=mRNA_P-wetherbeei_contig1362.2.1|Name=mRNA_P-wetherbeei_contig1362.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=885bp|location=Sequence derived from alignment at P-wetherbeei_contig1362:1047..2900+ (Phaeothamnion wetherbeei SAG_119_79)back to top |