mRNA_P-wetherbeei_contig13602.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A6N7GUW2_9HYPH (Transporter substrate-binding domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GUW2_9HYPH) HSP 1 Score: 300 bits (768), Expect = 1.430e-99 Identity = 164/247 (66.40%), Postives = 194/247 (78.54%), Query Frame = 1
Query: 67 AADPAVMKELAPTGKLRVAIAVGPAPSAMYSLQNP-DGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMK 804
A + A MKELAPTGKLRVAIAVGP+ SA++++++P GK +GV +DL A+ +KLGVPVE V Y +GEI S G WDVTF PVD++RK +DFG YHLLQSTYLVAPGS I LAEAN AGVRIA V TAT RAS+ +PNAT + + D A+ L+KEGK DAI LSRES+GG+ LPGSRVL+ FLNSTTA+AVP+NKPAA A+V+EFIEEAKASGLVRRALD +GLK SQVAPAGMK
Sbjct: 2 AVNDAAMKELAPTGKLRVAIAVGPSASALWTVRDPATGKPKGVPVDLGTAMAQKLGVPVELVEYASSGEIVASRDKGAWDVTFVPVDDDRKAAIDFGAPYHLLQSTYLVAPGSTIKTLAEANRAGVRIAIVDGTATGRASISASPNATTVKVKNPDEAVGLMKEGKLDAIALSRESVGGLVDALPGSRVLEEAFLNSTTAVAVPQNKPAARAFVTEFIEEAKASGLVRRALDAMGLKTSQVAPAGMK 248
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A327L5E8_9HYPH (PBPb domain-containing protein n=1 Tax=Rhodoplanes roseus TaxID=29409 RepID=A0A327L5E8_9HYPH) HSP 1 Score: 276 bits (707), Expect = 4.570e-90 Identity = 144/248 (58.06%), Postives = 188/248 (75.81%), Query Frame = 1
Query: 67 AADPAVMKELAPTGKLRVAIAVGPAPSAMYSLQNPDGKR-RGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMKP 807
AADP V+ ELAPTG+LRVA+ VGP PSA+Y++++ G RGVT+ LA L ++ GVP+ FVP TGEIQ SAA GVWDV+F PVD+ER+ VDFG+AYH+L+STYLV GS+I VLA+A+A G RI GV+DTATLRASMR +P ATH+A+ + + ++ G ADAI + RESLGG+A ++ GSR+LDG FL ++TA+AVP+ +P A A+ + +EEAKASGLVR A D +GL + VAPAG P
Sbjct: 19 AADPRVLAELAPTGRLRVAVVVGPTPSAIYAVRDRAGDSLRGVTVTLAQMLAERAGVPLWFVPLRSTGEIQASAAGGVWDVSFLPVDDERRALVDFGSAYHVLRSTYLVPAGSRIRVLADADAPGTRITGVRDTATLRASMRASPRATHLAVESPEDLVAMMHGGNADAIAMGRESLGGIAGEIEGSRILDGAFLTTSTAVAVPQGRPRARAFAAAVVEEAKASGLVREAFDRLGLTTAVVAPAGTWP 266
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A1W6ZP97_9HYPH (PBPb domain-containing protein n=2 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZP97_9HYPH) HSP 1 Score: 272 bits (696), Expect = 3.260e-88 Identity = 151/269 (56.13%), Postives = 187/269 (69.52%), Query Frame = 1
Query: 1 IMKFSAVAGALCAVFVTVASAQAADPAVMKELAPTGKLRVAIAVGPAPSAMYSLQNPDGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMKP 807
+M+ V G + A F A+A D A+ K+LAP LRVAIAVGPAPSA+Y++++ G RGV +DL AL KK+G PV+FV YL +G I A G+WDVTF PVD R K V FG AYH+L STYLV + + +AEA+ GVRIA V TAT RA+M + NAT I + GVD + L+K+ KADAI LSRESL G+ KLPGSR+LDGG LNS TA AVP KP ALAY++ F+EE KASG VR++ DD+GLK + VAPAG KP
Sbjct: 12 VMRLVLVCGLVVASFAIAKDARANDDAI-KQLAPADTLRVAIAVGPAPSALYTVKDASGTPRGVAVDLGAALAKKIGKPVQFVEYLASGAITNDADKGIWDVTFMPVDAARAKRVSFGAAYHVLSSTYLVTEKAPVKTVAEADKPGVRIAIVDGTATSRAAMAASKNATFITIGGVDEGVSLLKDNKADAIALSRESLTGLIGKLPGSRILDGGILNSYTAAAVPNGKPEALAYLTAFVEEMKASGAVRKSFDDIGLKTAVVAPAGAKP 279
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A516H2L2_9PROT (Transporter substrate-binding domain-containing protein n=1 Tax=Ferrovibrio terrae TaxID=2594003 RepID=A0A516H2L2_9PROT) HSP 1 Score: 260 bits (665), Expect = 1.100e-83 Identity = 143/246 (58.13%), Postives = 175/246 (71.14%), Query Frame = 1
Query: 70 ADPAVMKELAPTGKLRVAIAVGPAPSAMYSLQNPDGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMKP 807
A A + ELAP G +RVAIA+ PAPSA+Y++++ +G+ RGVT+DL HAL KLG PV+FV Y TGEI + + WDVTF P D R K VDFG YHLLQST LV+ LAE + +RIAGV+ TAT RA+ A + GVD A+ LVK G A+AI LSRESL G+ KLPGSRVLDGGFLNSTT++AVP+ K AALA+VS F+EE KA+G +RR+LD +GL ASQVAP GMKP
Sbjct: 22 AQTAPLNELAPKGSVRVAIAISPAPSALYAVKDSNGQYRGVTVDLGHALAAKLGKPVQFVAYASTGEITAAGDNDAWDVTFMPHDAARAKLVDFGTPYHLLQSTLLVSDKVSAKTLAEVDRPDIRIAGVEGTATARAAAAHFKQAKITHVRGVDDAVALVKAGNAEAIGLSRESLLGLRDKLPGSRVLDGGFLNSTTSVAVPRGKAAALAWVSAFVEEQKANGSIRRSLDAMGLTASQVAPPGMKP 267
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: UPI0017D7CDAC (Transporter substrate-binding domain-containing protein n=1 Tax=Rhodoplanes sp. TaxID=1968906 RepID=UPI0017D7CDAC) HSP 1 Score: 257 bits (657), Expect = 1.620e-82 Identity = 143/257 (55.64%), Postives = 185/257 (71.98%), Query Frame = 1
Query: 52 VASAQAAD----PAVMKELAPTGKLRVAIAVGPAPSAMYSLQN-PDGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMKP 807
V SA A D PAV++ELAPT +LRVA+ + PSA+Y++++ P G RGVT+ LA AL G+P++ V + GTGEIQ +A SG WDV F P DEER+ VDFG+AYH+LQSTYLV GS+I +A+A+A GVRI V+D+ATLRASMR AP ATH+A+ D A+ ++ G ADAI + RESL G+A ++ GSR+LD FL +TTA+AVPK +P A A V+ F+EEAKASGLVRR D GL ++ VAP G P
Sbjct: 8 VTSAAAEDIPISPAVLEELAPTRRLRVAVPISLTPSAVYAVRDYPTGPLRGVTVALAEALAAATGLPLDLVAFRGTGEIQMTAESGRWDVAFLPADEERRALVDFGSAYHILQSTYLVPVGSRIKCVADADAPGVRITAVRDSATLRASMRAAPRATHLAVDSPDDAVAMMHGGNADAIAMGRESLLGMAPEIAGSRILDEYFLTTTTAVAVPKGRPRARALVAAFVEEAKASGLVRRVFDRFGLVSALVAPPGAAP 264
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A0S3PP21_9BRAD (ABC transporter glutamine-binding protein GlnH n=1 Tax=Variibacter gotjawalensis TaxID=1333996 RepID=A0A0S3PP21_9BRAD) HSP 1 Score: 252 bits (644), Expect = 1.710e-80 Identity = 143/251 (56.97%), Postives = 180/251 (71.71%), Query Frame = 1
Query: 58 SAQAAD-PAVMKELAPTGKLRVAIAVGPAPSAMYSLQNPD-GKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMK 804
SAQA D A MKELAPTG LRVA+AVGPA SA+++ ++ G+ RGVTIDL ALG KLG+PV FV +GEI SA+SG WDV F PVD+ERKK VDFG Y L +STY+VAPGSKI +AE + GVR+ GV++TAT+R + RT N I G+D A+ ++K+GKADAI L RESL + + PG+RVLDG F + TAIAVPK + AAL +++FIE AK G VRRA D GL+ ++VAPAG +
Sbjct: 17 SAQAQDREATMKELAPTGTLRVAVAVGPAASALWTTRDATTGRPRGVTIDLGTALGAKLGIPVTFVELKSSGEIIESASSGTWDVGFTPVDDERKKLVDFGPNYALGESTYMVAPGSKIQSIAEVDRPGVRVVGVENTATIRTARRTLKNTEAIGTKGLDEAVAMMKDGKADAIALGRESLESLVDQFPGARVLDGYFHATGTAIAVPKGRAAALKIMTDFIEAAKQDGTVRRAFDAAGLQKTKVAPAGSR 267
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A327KPH9_9HYPH (PBPb domain-containing protein n=2 Tax=Rhodoplanes elegans TaxID=29408 RepID=A0A327KPH9_9HYPH) HSP 1 Score: 249 bits (635), Expect = 3.590e-79 Identity = 131/243 (53.91%), Postives = 180/243 (74.07%), Query Frame = 1
Query: 70 ADPAVMKELAPTGKLRVAIAVGPAPSAMYSLQNP-DGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPA 795
AD + ELAPTG+LRVAIAVGP PSA+Y+++ +G+ RGVT+ LA AL G+P+E VP+ +GEIQ +A S +WDV+F PVD+ER++ VDFG AYH+LQS+YLV GS I LAEA+A V I GV+++ATLRAS+R +P A+H+ + + A+ ++ G ADAI + RESL G+ T++ GSR+L G FL +TTA+ +PK +PAALA V+ +EEAKA+GLV+RA + VGL + V PA
Sbjct: 18 ADRELSAELAPTGRLRVAIAVGPTPSAVYAVRGEAEGELRGVTVALAEALAAATGLPLEIVPFRSSGEIQATAGSDLWDVSFLPVDDERRRHVDFGAAYHILQSSYLVPAGSPIHRLAEADAPDVHIVGVRNSATLRASLRASPRASHVPVETPEDAVAMMHGGMADAIAMGRESLSGLVTQIEGSRILPGSFLTTTTAVVLPKGRPAALARVTALVEEAKAAGLVQRAFERVGLAGANVPPA 260
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A7C4XSA4_9HYPH (Transporter substrate-binding domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XSA4_9HYPH) HSP 1 Score: 247 bits (631), Expect = 1.120e-78 Identity = 133/244 (54.51%), Postives = 175/244 (71.72%), Query Frame = 1
Query: 79 AVMKELAPTGKLRVAIAVGPAPSA-MYSLQNPDGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMKP 807
A +KEL+P+G+LRV +AVGP A ++ GK RGV +DL L +LGVPVE+VPY +G + +AAS WDV F PVDEER+K VDFG A+ +LQSTYLVAPGS + A+ + G+R+AG+++TAT RA+ R+ + + + D + L++ G+ +A+ SRE+L G+A KLPG+RVLDG FLNS A+AVPK +PAALAYVS+FIEEAKASGLVRRALD+ GL S VAP G P
Sbjct: 14 AAIKELSPSGRLRVGVAVGPTVGAGNVAIDAATGKPRGVAVDLGKELADRLGVPVEYVPYPNSGALTDAAASNAWDVAFLPVDEERRKKVDFGPAHMVLQSTYLVAPGSAVKTHADVDRLGIRVAGIENTATTRAAQRSLKSVVIMNVKTADELLSLLRTGQVEAVVQSREALLGLAKKLPGARVLDGSFLNSFVAVAVPKGRPAALAYVSKFIEEAKASGLVRRALDNAGLTTSVVAPPGPMP 257
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: J6LHZ2_9RHOB (Putative periplasmic-binding protein n=2 Tax=Rhodovulum sp. PH10 TaxID=1187851 RepID=J6LHZ2_9RHOB) HSP 1 Score: 241 bits (615), Expect = 1.540e-76 Identity = 128/234 (54.70%), Postives = 169/234 (72.22%), Query Frame = 1
Query: 100 PTGKLRVAIAVGPAPSAMYSLQNPDGKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGM 801
PTG+LRVAIAVG PSA +++++ G GVT+DLA AL +LGVPVE++ Y +GEIQ +AA G WD+ F PVD +R++ V FG AYHL++++YLV GS I +A+A+A VRIAGV+DTATLRAS +P A H+AL + A+ L+ G ADAI L RESL + ++ G+RVLDG FL + TA+AVP+ +P ALA VS F+E+AKA+G VRR LD GL + VAP GM
Sbjct: 2 PTGRLRVAIAVGATPSAAFAVRDAAGALHGVTVDLAAALADELGVPVEWLAYRSSGEIQNAAARGAWDLAFMPVDAQRRQVVAFGAAYHLMRASYLVPAGSPIKRIADADAPWVRIAGVRDTATLRASALASPRAVHLALDSSEDAVTLMTSGGADAIALGRESLAATSARIAGARVLDGAFLEARTAVAVPRGRPVALALVSGFVEQAKATGRVRRWLDAAGLTEASVAPPGM 235
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Match: A0A327K1Y2_9HYPH (PBPb domain-containing protein n=4 Tax=Rhodoplanes piscinae TaxID=444923 RepID=A0A327K1Y2_9HYPH) HSP 1 Score: 230 bits (586), Expect = 1.350e-71 Identity = 126/248 (50.81%), Postives = 168/248 (67.74%), Query Frame = 1
Query: 67 AADPAVMKELAPTGKLRVAIAVGPAPSAMYSLQNPD-GKRRGVTIDLAHALGKKLGVPVEFVPYLGTGEIQGSAASGVWDVTFAPVDEERKKFVDFGNAYHLLQSTYLVAPGSKIMVLAEANAAGVRIAGVKDTATLRASMRTAPNATHIALPGVDAAIELVKEGKADAIPLSRESLGGVATKLPGSRVLDGGFLNSTTAIAVPKNKPAALAYVSEFIEEAKASGLVRRALDDVGLKASQVAPAGMKP 807
A +P + ELAPTG+LR A+ VG APSA ++++P+ G RGV + L AL L +P++ VP+LG GEI+ +A +WDV+ P D+ER+K V FG AYH+L YLV GS I L +A+A GVRI G+ A LR S+R +P ATHI + D A+ L+ G AD I L RESL VA+ + GSR+LDG F +TTA+AVP+ + A+ VS F+E+AKASGLVRRALD++GL + VAPAG P
Sbjct: 30 AGEPTAVDELAPTGRLRAAMVVGLAPSAFAAVRDPESGGLRGVPVVLFQALADSLALPLDIVPFLGVGEIELTAGCDMWDVSLLPADDERRKAVTFGAAYHILNCAYLVPAGSPIKRLGDADAPGVRIVGLAGGAALRGSLRASPRATHITVASPDDAVALMHGGSADVIALGRESLRAVASLIEGSRILDGTFFTTTTAVAVPRGRLRAVGLVSAFVEDAKASGLVRRALDELGLPDAPVAPAGAYP 277 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13602.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13602.1.1 >prot_P-wetherbeei_contig13602.1.1 ID=prot_P-wetherbeei_contig13602.1.1|Name=mRNA_P-wetherbeei_contig13602.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp MKFSAVAGALCAVFVTVASAQAADPAVMKELAPTGKLRVAIAVGPAPSAMback to top mRNA from alignment at P-wetherbeei_contig13602:319..1128- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13602.1.1 ID=mRNA_P-wetherbeei_contig13602.1.1|Name=mRNA_P-wetherbeei_contig13602.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig13602:319..1128- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13602:319..1128- >mRNA_P-wetherbeei_contig13602.1.1 ID=mRNA_P-wetherbeei_contig13602.1.1|Name=mRNA_P-wetherbeei_contig13602.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig13602:319..1128- (Phaeothamnion wetherbeei SAG_119_79)back to top |