mRNA_P-wetherbeei_contig136.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A6H5JHW0_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW0_9PHAE) HSP 1 Score: 256 bits (654), Expect = 1.860e-76 Identity = 120/271 (44.28%), Postives = 170/271 (62.73%), Query Frame = 1
Query: 484 KPFYNFLYLIFTGDTPASLRRREELRRIYGDYNGVATATDGAGAQHPYTFRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKP--IAGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRPETANMTFYHNCKHMDQLRKCSLS 1290
+P++++L ++F+GD +L +R+ +R +YG Y G TD G YTF+VL++ PGA G+L D+L++ VE GY +IAAKT M+ V H F Y++K D+DT+VC AS +H VPA ++ +VY G+PTAC++ P P G+VI +WYD ++ HT+NGLDCYPVYMQGAFY+L+ PLV+ L++ L+ F NED TIG WL G +R + PL + +VW C C + P F+HNCK MD LR C S
Sbjct: 142 RPYFDYLLVVFSGDDTDALAKRDYMREMYGTYGGQILITDERGQAFIYTFKVLYVVGHPGAVDMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKTDDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHL-PNNPNDAVGKVIVDMDDKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARVWECSCKRP-NFNPGGDANVFFHNCKSMDDLRGCKAS 410
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A835YWI3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI3_9STRA) HSP 1 Score: 253 bits (647), Expect = 9.000e-76 Identity = 119/305 (39.02%), Postives = 188/305 (61.64%), Query Frame = 1
Query: 391 ASSSTVLRTQHGEAASRSLQVVEGELVSAAPKPFYNFLYLIFTGDTPASLRRREELRRIYGDYNGVATATDGAGAQHPYTFRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPIAGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCS-----HGMEWRPETANMTFYHNCKHMDQLRKCSLS 1290
AS++ L+ Q + +SR++ E+V+ + P Y+ L ++F+GD+ +RR+ +RRIYG Y G G ++ Y F+++F+ + AP DG L GD L ++ DGY +I KT GM+ ++ H NF Y+MK D+DT+VC + LH +P E + +VYAGVPT CN+ P + GRV H+WYDE ++ HT+ ++CYP Y QGA Y+L++ LV+ L++ RDHL+ F NED T+G+WL+G +R ++ L +D ++W C C+ H + N F+HNCK Q+ KC+++
Sbjct: 83 ASAAVALQQQQAKNSSRAI----AEVVNDSSLPTYDMLLVVFSGDSEDDAKRRDLMRRIYGRYRGRVVLNRGKKSRKKYKFKLVFVRGRSDAPEDGVLNGDTLLINAPDGYRNIVHKTKGMVSLLKHVNFKYLMKSDDDTFVCVQQVFHRLHNLPEETKKKVYAGVPTHCNM-PGHQMVGRVFSDPTHKWYDERYVEHTMGSMECYPPYHQGAGYILSRSLVEFLYKGRDHLLTFINEDVTMGTWLMGVDRSVVSLRDLDGARLWECTCASYRFAHDAAFHKNHQNNAFFHNCKQAWQMLKCAIA 382
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: D7FQB9_ECTSI (Hexosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB9_ECTSI) HSP 1 Score: 251 bits (640), Expect = 6.600e-74 Identity = 117/271 (43.17%), Postives = 169/271 (62.36%), Query Frame = 1
Query: 484 KPFYNFLYLIFTGDTPASLRRREELRRIYGDYNGVATATDGAGAQHPYTFRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPI--AGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRPETANMTFYHNCKHMDQLRKCSLS 1290
+ ++++L ++F+GD +L +R+ +R++YG Y G TD G YTF+VL++ PGA G+L D+L++ VE GY +IAAKT M+ V H F Y++K D+DT+VC AS +H VPA ++ +VY G+PTAC++ P P G+VI +WYD ++ HT+NGLDCYPVYMQGAFY+L+ PLV+ L++ L+ F NED TIG WL G +R + PL + ++W C C + P F+H CK MD LR C S
Sbjct: 182 RAYFDYLLVVFSGDDTDALAKRDYMRKMYGTYGGQILITDERGQAFIYTFKVLYVVGHPGAADMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKADDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHL-PNNPDDEVGKVIVDMDEKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARMWECSCKRP-NFNPGGDANVFFHGCKGMDDLRGCKAS 450
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: D8LT07_ECTSI (Beta-1,3-n-acetylglucosaminyltransferase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT07_ECTSI) HSP 1 Score: 255 bits (651), Expect = 1.360e-73 Identity = 125/288 (43.40%), Postives = 181/288 (62.85%), Query Frame = 1
Query: 451 VVEGELV---SAAPKPFYNFLYLIFTGDTPASLRRREELRRIYGDYNGVA------TATDGAGAQ-HPYTFRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPI-AGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRPETANMTFYHNCKHMDQLRKC 1281
VV GEL +A +P + L IF+G T A +RE LR+IY Y G + T+G + +T V+F+ K APP+GEL GD+LY+ V +GY +I KT M+ +V HF+FD+++K D+D++VC +AS+LH + E+RG+VY GVPTACN + GRV++ HRW+D +++HTL GLDC+P YMQGAFY+LA+PLV+ L+R +HL F NED TIGSWL+G +RE++ + + + +W C C+ F+HNCK + QL+ C
Sbjct: 339 VVMGELEPVGTAKTRPKVDLLLTIFSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEGKNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFDFLLKADDDSFVCLTRIASMLHDLDPEIRGKVYVGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLRTSHLWDCLCARTQITVKTRKKHMFFHNCKGLSQLKLC 626
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A6H5KLW3_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW3_9PHAE) HSP 1 Score: 241 bits (616), Expect = 2.750e-72 Identity = 113/264 (42.80%), Postives = 167/264 (63.26%), Query Frame = 1
Query: 514 FTGDTPASLRRREELRRIYGDYNGVA------TATDGAGAQ-HPYTFRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPI-AGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRPETANMTFYHNCKHMDQLRKC 1281
F + A +RE LR+IY Y G + T+G + +T V+F+ K APP+GEL GD+LY+ V +GY +I KT M+ +V HF+F++++K D+D++VC +AS+LH + E+ G+VYAGVPTACN + GRV++ HRW+D +++HTL GLDC+P YMQGAFY+LA+PLV+ L+R +HL F NED TIGSWL+G +RE++ + + + +W C C+ F+HNCK + QL+ C
Sbjct: 27 FPAASQADAAKRELLRQIYDKYEGWVKVGGPNSLTEGTNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEISGKVYAGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLHTSHLWDCLCARTQITVKTRRKQMFFHNCKGLSQLKLC 290
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: D7G6P0_ECTSI (Hexosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P0_ECTSI) HSP 1 Score: 237 bits (604), Expect = 1.740e-68 Identity = 116/252 (46.03%), Postives = 161/252 (63.89%), Query Frame = 1
Query: 487 PFYNFLYLIFTGDTPASLRRREELRRIYGDYNG-VATATDGAGAQHPYT----FRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPIA--GRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRP 1221
P + L I +GD A+ +R+ +R +Y Y G V + + Q+ T F+V+F+ + APPDGEL GD+LY++ DGY +I K MMG+V H +F +++K D+DT+VC LA+ LH P E + ++YAGVPTACN +P P GRVI+ + +WYD+ F+ HTL GLDCYPVYMQGAFYVLA+PLV+ L+R R+H F NED T+GSWLLG +R L + +S ++W C C RP
Sbjct: 179 PRTDLLLAILSGDDKAARLKRDTIRELYDKYGGWVTVGGERSQEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACN-SPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSNFVLRP 429
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A835YNB7_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB7_9STRA) HSP 1 Score: 228 bits (582), Expect = 2.480e-68 Identity = 100/218 (45.87%), Postives = 142/218 (65.14%), Query Frame = 1
Query: 631 FRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPIAGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRPETANMTFYHNCKHMDQLRKCS 1284
+VLF+ A +G+L GD+LY+ GY +I KT M+ +VTHFN Y+MK D+DT+VC N +A + +P V+ +VYAG+PTAC + P GRVI+ H+W+D F+ HTL GLDCYP Y QGAFY+L++PLV LH+ R L+ F NED T+GSWL+G +RE++ + ++W C C+ +W N F+HNCK +DQL+KC+
Sbjct: 1 MQVLFLVSHIDASEEGDLVGDILYVQCPAGYRNIVQKTKAMLSIVTHFNHKYLMKSDDDTFVCLNRVAKRMFTLPPAVKEKVYAGIPTACGLE-SNPHIGRVIKDPNHKWHDAKFVSHTLGGLDCYPAYHQGAFYLLSEPLVQYLHQGRSKLLTFTNEDVTMGSWLMGVDREMIAFNSISEARLWECTCAKYTKWLKYDTN-AFFHNCKSLDQLQKCA 216
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A835YTA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA1_9STRA) HSP 1 Score: 174 bits (441), Expect = 4.250e-44 Identity = 95/259 (36.68%), Postives = 135/259 (52.12%), Query Frame = 1
Query: 664 APPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILH---------------------------------------------------AVPAEVRGRVYAGVPTACNIAPRKPIAGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRPETANMT--FYHNCKHMDQLRKC 1281
AP DG L GD+ ++ GY +IA T MM + HF F ++ K + DT+VC L ++L A + R+YAGVPTAC + P GRVI K +RWYD F+ HT+ GL CYPVYMQGAFYVLA+PLV+ L+ R H V F NED T+GSWLLG +R+++ + + + ++W C CS ++ P+ A + F+H+CK +++LR+C
Sbjct: 311 APDDGRLDGDVFWVRAPPGYNNIAEMTKQMMAL--HFLFRFLSKINGDTFVCLRRLVTLLAVQXXXXXXXXXXXXXXXXXXXRLVQXXXXXXXXXXXXXXXXXXXXXVTLLAAQTQATQRRLYAGVPTACGVHRNNPNVGRVIMDKTNRWYDPKFVTHTMGGLPCYPVYMQGAFYVLAQPLVEFLNLGRPHWVTFQNEDVTVGSWLLGVDRDIVTIDDITTARLWGCQCS--LDTMPQWARKSSVFFHDCKALEKLRRC 565
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A2P6TC16_CHLSO (Putative beta-1,3-galactosyltransferase 12 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TC16_CHLSO) HSP 1 Score: 66.2 bits (160), Expect = 8.350e-8 Identity = 57/153 (37.25%), Postives = 80/153 (52.29%), Query Frame = 1
Query: 688 GDLLYLDVEDGYYHIAAKTLGMM-GVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPIAGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDH-LVVFGNEDATIGSWLLGTN 1140
GD+L LD+ +GY + AKT+ + V+ +N Y++K D+D Y+ + L HA R +A V A I K G VI+ ++RW+ EP +H L G + Y + G YVL+ + L RD L F NED TIGSWLL N
Sbjct: 108 GDMLRLDLVEGYAGLPAKTIAFLRAVMQRWNPQYIVKADDDVYLRLDRLP---HAA------RQWAAVH-ADYIGCMK--TGPVIKSDKYRWF-EP--QHALIGSE-YFAHAWGTIYVLSGRVAADLGAMRDGALRHFANEDVTIGSWLLAFN 244
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A7S4B0K0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B0K0_CHRCT) HSP 1 Score: 65.1 bits (157), Expect = 1.860e-7 Identity = 61/205 (29.76%), Postives = 95/205 (46.34%), Query Frame = 1
Query: 541 RRREELRRIYGDYNGVATATDG---AGAQHPYTFRVLFIARKPGAPPDGELAGD-LLYLDVEDGYYHIAAKTLGMMGVVT-HFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPIAGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVD-LLHRSRDHLVVFGNEDATIGSWLLGT 1137
RRR +RR + Y+ A +G + + + R LF+ G L GD LL L VEDGY I+ K + + +F+F Y++K D+D++VC + L L P R +Y GV + P R R Y E F R Y YMQGA Y+L++ + + ++ ++ + + EDA +G+ L T
Sbjct: 247 RRRVAVRRSWARYSPHIGAEEGPSLSNREAQCSIRFLFVM---GGAKAARLGGDDLLLLPVEDGYREISQKVIAAIRFANENFDFKYLLKTDDDSFVCLSRLMESLRLQP---RSGLYMGVLNKNHSIVLDPWQAHYPRW-RDAEYAEIFKRRV------YLPYMQGAGYILSRDMAERVVSKAAELPKIPPIEDALVGALLADT 438 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig136.5.1 >prot_P-wetherbeei_contig136.5.1 ID=prot_P-wetherbeei_contig136.5.1|Name=mRNA_P-wetherbeei_contig136.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=394bp MGKQKASPWLCCYFMAFAIVGALITAIVLELQGAGRDFAIWLWTPQAPLGback to top mRNA from alignment at P-wetherbeei_contig136:6242..7847+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig136.5.1 ID=mRNA_P-wetherbeei_contig136.5.1|Name=mRNA_P-wetherbeei_contig136.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1606bp|location=Sequence derived from alignment at P-wetherbeei_contig136:6242..7847+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig136:6242..7847+ >mRNA_P-wetherbeei_contig136.5.1 ID=mRNA_P-wetherbeei_contig136.5.1|Name=mRNA_P-wetherbeei_contig136.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1182bp|location=Sequence derived from alignment at P-wetherbeei_contig136:6242..7847+ (Phaeothamnion wetherbeei SAG_119_79)back to top |