mRNA_P-wetherbeei_contig136.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig136.5.1
Unique NamemRNA_P-wetherbeei_contig136.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A6H5JHW0_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW0_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 1.860e-76
Identity = 120/271 (44.28%), Postives = 170/271 (62.73%), Query Frame = 1
Query:  484 KPFYNFLYLIFTGDTPASLRRREELRRIYGDYNGVATATDGAGAQHPYTFRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKP--IAGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRPETANMTFYHNCKHMDQLRKCSLS 1290
            +P++++L ++F+GD   +L +R+ +R +YG Y G    TD  G    YTF+VL++   PGA   G+L  D+L++ VE GY +IAAKT  M+  V H  F Y++K D+DT+VC    AS +H VPA ++ +VY G+PTAC++ P  P    G+VI     +WYD  ++ HT+NGLDCYPVYMQGAFY+L+ PLV+ L++    L+ F NED TIG WL G +R + PL  +   +VW C C     + P      F+HNCK MD LR C  S
Sbjct:  142 RPYFDYLLVVFSGDDTDALAKRDYMREMYGTYGGQILITDERGQAFIYTFKVLYVVGHPGAVDMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKTDDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHL-PNNPNDAVGKVIVDMDDKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARVWECSCKRP-NFNPGGDANVFFHNCKSMDDLRGCKAS 410          
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A835YWI3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI3_9STRA)

HSP 1 Score: 253 bits (647), Expect = 9.000e-76
Identity = 119/305 (39.02%), Postives = 188/305 (61.64%), Query Frame = 1
Query:  391 ASSSTVLRTQHGEAASRSLQVVEGELVSAAPKPFYNFLYLIFTGDTPASLRRREELRRIYGDYNGVATATDGAGAQHPYTFRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPIAGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCS-----HGMEWRPETANMTFYHNCKHMDQLRKCSLS 1290
            AS++  L+ Q  + +SR++     E+V+ +  P Y+ L ++F+GD+    +RR+ +RRIYG Y G      G  ++  Y F+++F+  +  AP DG L GD L ++  DGY +I  KT GM+ ++ H NF Y+MK D+DT+VC   +   LH +P E + +VYAGVPT CN+ P   + GRV     H+WYDE ++ HT+  ++CYP Y QGA Y+L++ LV+ L++ RDHL+ F NED T+G+WL+G +R ++ L  +D  ++W C C+     H   +     N  F+HNCK   Q+ KC+++
Sbjct:   83 ASAAVALQQQQAKNSSRAI----AEVVNDSSLPTYDMLLVVFSGDSEDDAKRRDLMRRIYGRYRGRVVLNRGKKSRKKYKFKLVFVRGRSDAPEDGVLNGDTLLINAPDGYRNIVHKTKGMVSLLKHVNFKYLMKSDDDTFVCVQQVFHRLHNLPEETKKKVYAGVPTHCNM-PGHQMVGRVFSDPTHKWYDERYVEHTMGSMECYPPYHQGAGYILSRSLVEFLYKGRDHLLTFINEDVTMGTWLMGVDRSVVSLRDLDGARLWECTCASYRFAHDAAFHKNHQNNAFFHNCKQAWQMLKCAIA 382          
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: D7FQB9_ECTSI (Hexosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB9_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 6.600e-74
Identity = 117/271 (43.17%), Postives = 169/271 (62.36%), Query Frame = 1
Query:  484 KPFYNFLYLIFTGDTPASLRRREELRRIYGDYNGVATATDGAGAQHPYTFRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPI--AGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRPETANMTFYHNCKHMDQLRKCSLS 1290
            + ++++L ++F+GD   +L +R+ +R++YG Y G    TD  G    YTF+VL++   PGA   G+L  D+L++ VE GY +IAAKT  M+  V H  F Y++K D+DT+VC    AS +H VPA ++ +VY G+PTAC++ P  P    G+VI     +WYD  ++ HT+NGLDCYPVYMQGAFY+L+ PLV+ L++    L+ F NED TIG WL G +R + PL  +   ++W C C     + P      F+H CK MD LR C  S
Sbjct:  182 RAYFDYLLVVFSGDDTDALAKRDYMRKMYGTYGGQILITDERGQAFIYTFKVLYVVGHPGAADMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKADDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHL-PNNPDDEVGKVIVDMDEKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARMWECSCKRP-NFNPGGDANVFFHGCKGMDDLRGCKAS 450          
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: D8LT07_ECTSI (Beta-1,3-n-acetylglucosaminyltransferase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT07_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 1.360e-73
Identity = 125/288 (43.40%), Postives = 181/288 (62.85%), Query Frame = 1
Query:  451 VVEGELV---SAAPKPFYNFLYLIFTGDTPASLRRREELRRIYGDYNGVA------TATDGAGAQ-HPYTFRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPI-AGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRPETANMTFYHNCKHMDQLRKC 1281
            VV GEL    +A  +P  + L  IF+G T A   +RE LR+IY  Y G        + T+G   +   +T  V+F+  K  APP+GEL GD+LY+ V +GY +I  KT  M+ +V HF+FD+++K D+D++VC   +AS+LH +  E+RG+VY GVPTACN +       GRV++   HRW+D  +++HTL GLDC+P YMQGAFY+LA+PLV+ L+R  +HL  F NED TIGSWL+G +RE++ +  + +  +W C C+             F+HNCK + QL+ C
Sbjct:  339 VVMGELEPVGTAKTRPKVDLLLTIFSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEGKNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFDFLLKADDDSFVCLTRIASMLHDLDPEIRGKVYVGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLRTSHLWDCLCARTQITVKTRKKHMFFHNCKGLSQLKLC 626          
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A6H5KLW3_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW3_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 2.750e-72
Identity = 113/264 (42.80%), Postives = 167/264 (63.26%), Query Frame = 1
Query:  514 FTGDTPASLRRREELRRIYGDYNGVA------TATDGAGAQ-HPYTFRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPI-AGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRPETANMTFYHNCKHMDQLRKC 1281
            F   + A   +RE LR+IY  Y G        + T+G   +   +T  V+F+  K  APP+GEL GD+LY+ V +GY +I  KT  M+ +V HF+F++++K D+D++VC   +AS+LH +  E+ G+VYAGVPTACN +       GRV++   HRW+D  +++HTL GLDC+P YMQGAFY+LA+PLV+ L+R  +HL  F NED TIGSWL+G +RE++ +  + +  +W C C+             F+HNCK + QL+ C
Sbjct:   27 FPAASQADAAKRELLRQIYDKYEGWVKVGGPNSLTEGTNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEISGKVYAGVPTACNQSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLHTSHLWDCLCARTQITVKTRRKQMFFHNCKGLSQLKLC 290          
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: D7G6P0_ECTSI (Hexosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P0_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 1.740e-68
Identity = 116/252 (46.03%), Postives = 161/252 (63.89%), Query Frame = 1
Query:  487 PFYNFLYLIFTGDTPASLRRREELRRIYGDYNG-VATATDGAGAQHPYT----FRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPIA--GRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRP 1221
            P  + L  I +GD  A+  +R+ +R +Y  Y G V    + +  Q+  T    F+V+F+  +  APPDGEL GD+LY++  DGY +I  K   MMG+V H +F +++K D+DT+VC   LA+ LH  P E + ++YAGVPTACN +P  P    GRVI+  + +WYD+ F+ HTL GLDCYPVYMQGAFYVLA+PLV+ L+R R+H   F NED T+GSWLLG +R L  +   +S ++W C C      RP
Sbjct:  179 PRTDLLLAILSGDDKAARLKRDTIRELYDKYGGWVTVGGERSQEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACN-SPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSNFVLRP 429          
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A835YNB7_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB7_9STRA)

HSP 1 Score: 228 bits (582), Expect = 2.480e-68
Identity = 100/218 (45.87%), Postives = 142/218 (65.14%), Query Frame = 1
Query:  631 FRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPIAGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRPETANMTFYHNCKHMDQLRKCS 1284
             +VLF+     A  +G+L GD+LY+    GY +I  KT  M+ +VTHFN  Y+MK D+DT+VC N +A  +  +P  V+ +VYAG+PTAC +    P  GRVI+   H+W+D  F+ HTL GLDCYP Y QGAFY+L++PLV  LH+ R  L+ F NED T+GSWL+G +RE++    +   ++W C C+   +W     N  F+HNCK +DQL+KC+
Sbjct:    1 MQVLFLVSHIDASEEGDLVGDILYVQCPAGYRNIVQKTKAMLSIVTHFNHKYLMKSDDDTFVCLNRVAKRMFTLPPAVKEKVYAGIPTACGLE-SNPHIGRVIKDPNHKWHDAKFVSHTLGGLDCYPAYHQGAFYLLSEPLVQYLHQGRSKLLTFTNEDVTMGSWLMGVDREMIAFNSISEARLWECTCAKYTKWLKYDTN-AFFHNCKSLDQLQKCA 216          
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A835YTA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA1_9STRA)

HSP 1 Score: 174 bits (441), Expect = 4.250e-44
Identity = 95/259 (36.68%), Postives = 135/259 (52.12%), Query Frame = 1
Query:  664 APPDGELAGDLLYLDVEDGYYHIAAKTLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILH---------------------------------------------------AVPAEVRGRVYAGVPTACNIAPRKPIAGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRCPCSHGMEWRPETANMT--FYHNCKHMDQLRKC 1281
            AP DG L GD+ ++    GY +IA  T  MM +  HF F ++ K + DT+VC   L ++L                                                    A     + R+YAGVPTAC +    P  GRVI  K +RWYD  F+ HT+ GL CYPVYMQGAFYVLA+PLV+ L+  R H V F NED T+GSWLLG +R+++ +  + + ++W C CS  ++  P+ A  +  F+H+CK +++LR+C
Sbjct:  311 APDDGRLDGDVFWVRAPPGYNNIAEMTKQMMAL--HFLFRFLSKINGDTFVCLRRLVTLLAVQXXXXXXXXXXXXXXXXXXXRLVQXXXXXXXXXXXXXXXXXXXXXVTLLAAQTQATQRRLYAGVPTACGVHRNNPNVGRVIMDKTNRWYDPKFVTHTMGGLPCYPVYMQGAFYVLAQPLVEFLNLGRPHWVTFQNEDVTVGSWLLGVDRDIVTIDDITTARLWGCQCS--LDTMPQWARKSSVFFHDCKALEKLRRC 565          
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A2P6TC16_CHLSO (Putative beta-1,3-galactosyltransferase 12 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TC16_CHLSO)

HSP 1 Score: 66.2 bits (160), Expect = 8.350e-8
Identity = 57/153 (37.25%), Postives = 80/153 (52.29%), Query Frame = 1
Query:  688 GDLLYLDVEDGYYHIAAKTLGMM-GVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPIAGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRSRDH-LVVFGNEDATIGSWLLGTN 1140
            GD+L LD+ +GY  + AKT+  +  V+  +N  Y++K D+D Y+  + L    HA       R +A V  A  I   K   G VI+  ++RW+ EP  +H L G + Y  +  G  YVL+  +   L   RD  L  F NED TIGSWLL  N
Sbjct:  108 GDMLRLDLVEGYAGLPAKTIAFLRAVMQRWNPQYIVKADDDVYLRLDRLP---HAA------RQWAAVH-ADYIGCMK--TGPVIKSDKYRWF-EP--QHALIGSE-YFAHAWGTIYVLSGRVAADLGAMRDGALRHFANEDVTIGSWLLAFN 244          
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Match: A0A7S4B0K0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B0K0_CHRCT)

HSP 1 Score: 65.1 bits (157), Expect = 1.860e-7
Identity = 61/205 (29.76%), Postives = 95/205 (46.34%), Query Frame = 1
Query:  541 RRREELRRIYGDYNGVATATDG---AGAQHPYTFRVLFIARKPGAPPDGELAGD-LLYLDVEDGYYHIAAKTLGMMGVVT-HFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVPTACNIAPRKPIAGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVD-LLHRSRDHLVVFGNEDATIGSWLLGT 1137
            RRR  +RR +  Y+    A +G   +  +   + R LF+    G      L GD LL L VEDGY  I+ K +  +     +F+F Y++K D+D++VC + L   L   P   R  +Y GV    +     P      R  R   Y E F R        Y  YMQGA Y+L++ + + ++ ++ +   +   EDA +G+ L  T
Sbjct:  247 RRRVAVRRSWARYSPHIGAEEGPSLSNREAQCSIRFLFVM---GGAKAARLGGDDLLLLPVEDGYREISQKVIAAIRFANENFDFKYLLKTDDDSFVCLSRLMESLRLQP---RSGLYMGVLNKNHSIVLDPWQAHYPRW-RDAEYAEIFKRRV------YLPYMQGAGYILSRDMAERVVSKAAELPKIPPIEDALVGALLADT 438          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig136.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5JHW0_9PHAE1.860e-7644.28Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0A835YWI3_9STRA9.000e-7639.02Hexosyltransferase n=1 Tax=Tribonema minus TaxID=3... [more]
D7FQB9_ECTSI6.600e-7443.17Hexosyltransferase n=1 Tax=Ectocarpus siliculosus ... [more]
D8LT07_ECTSI1.360e-7343.40Beta-1,3-n-acetylglucosaminyltransferase, putative... [more]
A0A6H5KLW3_9PHAE2.750e-7242.80Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 131... [more]
D7G6P0_ECTSI1.740e-6846.03Hexosyltransferase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A835YNB7_9STRA2.480e-6845.87Hexosyltransferase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A835YTA1_9STRA4.250e-4436.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2P6TC16_CHLSO8.350e-837.25Putative beta-1,3-galactosyltransferase 12 n=1 Tax... [more]
A0A7S4B0K0_CHRCT1.860e-729.76Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig136contigP-wetherbeei_contig136:6242..7847 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LT07
PFAMsEOS1,Galactosyl_T
Model size1606
Max annot lvl2759|Eukaryota
KEGG koko:K00734
KEGG ReactionR05927
KEGG Pathwayko00532,ko00534,ko01100,map00532,map00534,map01100
KEGG ModuleM00057
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.68e-76
EggNOG OGsKOG2288@1|root,KOG2288@2759|Eukaryota
EC2.4.1.134
Descriptiongalactosyltransferase activity
Cds size1182
COG categoryM
CAZyGT31
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185991.812409-UTR-P-wetherbeei_contig136:6241..63821683185991.812409-UTR-P-wetherbeei_contig136:6241..6382Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig136 6242..6382 +
1683185991.8341548-UTR-P-wetherbeei_contig136:7564..78471683185991.8341548-UTR-P-wetherbeei_contig136:7564..7847Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig136 7565..7847 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185991.8249528-CDS-P-wetherbeei_contig136:6382..75641683185991.8249528-CDS-P-wetherbeei_contig136:6382..7564Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig136 6383..7564 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig136.5.1prot_P-wetherbeei_contig136.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig136 6383..7564 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig136.5.1

>prot_P-wetherbeei_contig136.5.1 ID=prot_P-wetherbeei_contig136.5.1|Name=mRNA_P-wetherbeei_contig136.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=394bp
MGKQKASPWLCCYFMAFAIVGALITAIVLELQGAGRDFAIWLWTPQAPLG
LLVESSTKLWRAQHRIATARSFPVGGGQAASSAASSSTVLRTQHGEAASR
SLQVVEGELVSAAPKPFYNFLYLIFTGDTPASLRRREELRRIYGDYNGVA
TATDGAGAQHPYTFRVLFIARKPGAPPDGELAGDLLYLDVEDGYYHIAAK
TLGMMGVVTHFNFDYVMKGDEDTYVCFNLLASILHAVPAEVRGRVYAGVP
TACNIAPRKPIAGRVIRVKRHRWYDEPFIRHTLNGLDCYPVYMQGAFYVL
AKPLVDLLHRSRDHLVVFGNEDATIGSWLLGTNRELLPLGRVDSEQVWRC
PCSHGMEWRPETANMTFYHNCKHMDQLRKCSLSRDSGHERALC*
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mRNA from alignment at P-wetherbeei_contig136:6242..7847+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig136.5.1 ID=mRNA_P-wetherbeei_contig136.5.1|Name=mRNA_P-wetherbeei_contig136.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1606bp|location=Sequence derived from alignment at P-wetherbeei_contig136:6242..7847+ (Phaeothamnion wetherbeei SAG_119_79)
CTGCGATTGTCCGCCGTTTCCCTTTTCTTCGGGCTTAAACGGATGCGACC AGCTATTTGACCAGCTCGAGCAGCCCTGGGCTCTTGCAGACCTTAAAGCT ACCAGCATAAGTAGGCCAAAAACTGGAAACCTCCAACGAGAATGGGAAAG CAAAAGGCGTCCCCATGGCTGTGCTGTTACTTCATGGCCTTTGCCATCGT CGGCGCTCTCATTACTGCCATCGTCTTGGAACTCCAAGGTGCAGGGCGCG ATTTTGCCATTTGGTTATGGACACCTCAGGCCCCATTAGGTTTGTTAGTG GAAAGCTCGACCAAGCTCTGGCGCGCTCAACACAGAATAGCGACGGCGAG ATCGTTCCCAGTCGGAGGAGGACAGGCCGCATCCTCAGCGGCCAGTTCGA GCACGGTCTTGCGCACTCAACACGGAGAAGCGGCGTCACGATCGCTCCAA GTCGTAGAGGGAGAGCTTGTTTCCGCGGCGCCCAAGCCGTTTTACAACTT TTTGTACCTGATTTTCACTGGAGACACGCCCGCATCGTTGAGACGTCGTG AGGAGCTGCGACGGATCTACGGGGACTACAATGGCGTCGCCACGGCAACT GATGGCGCCGGGGCGCAGCACCCTTACACGTTCCGGGTGCTCTTCATCGC GCGGAAGCCCGGCGCGCCGCCCGACGGAGAGCTCGCCGGCGACCTGCTCT ACCTGGACGTCGAGGACGGTTACTACCACATTGCCGCCAAGACGCTTGGG ATGATGGGTGTCGTGACGCACTTCAACTTCGACTACGTTATGAAGGGCGA CGAGGATACCTACGTCTGCTTCAACCTGCTGGCGTCGATCCTCCACGCCG TGCCGGCCGAAGTCCGCGGCCGGGTCTATGCTGGCGTGCCGACCGCCTGC AACATTGCGCCGCGCAAGCCCATCGCCGGTCGGGTCATCCGCGTCAAGCG GCACCGGTGGTACGACGAGCCCTTCATCCGGCATACGTTGAACGGCCTCG ACTGCTACCCGGTGTACATGCAAGGCGCCTTCTACGTGCTGGCCAAGCCG CTGGTGGACCTGCTCCACCGCAGCCGCGACCATCTGGTCGTCTTCGGGAA CGAGGACGCGACCATCGGCAGCTGGCTGCTGGGAACGAACCGGGAGCTGC TGCCGCTGGGGCGCGTTGACAGCGAGCAGGTGTGGCGCTGCCCGTGCTCG CACGGCATGGAGTGGCGGCCCGAGACGGCCAATATGACCTTCTACCACAA CTGCAAACACATGGACCAGCTGCGCAAGTGCTCGCTTTCCAGGGATTCGG GGCACGAGCGGGCCCTCTGCTGACACTGGCGGTTGCCGTCCTGTCTTTGC TTGGAGGGGCGGGGCGGCAACCGCGGGCATGGCGTTTGCTCGACCTTCGG TGCACAAGTGCGGGGGCGGCGGCGACCGCGACGGTGGTGGCAGCGACAGC AGCAGCGGCAGCGGCGAAGCAGGAGGCTGGATGGAACAATTTTGCTGGAA TGAGGTATGGCAGGTATGGCAGCGGACCCTCTTCCGTCTTACTTCTTTAA TGTAATTGAAACGAAGGTAGAAGAGGTGACCATATTTCACCTCAATTTTG TCTTGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig136:6242..7847+

>mRNA_P-wetherbeei_contig136.5.1 ID=mRNA_P-wetherbeei_contig136.5.1|Name=mRNA_P-wetherbeei_contig136.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1182bp|location=Sequence derived from alignment at P-wetherbeei_contig136:6242..7847+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGAAAGCAAAAGGCGTCCCCATGGCTGTGCTGTTACTTCATGGCCTT
TGCCATCGTCGGCGCTCTCATTACTGCCATCGTCTTGGAACTCCAAGGTG
CAGGGCGCGATTTTGCCATTTGGTTATGGACACCTCAGGCCCCATTAGGT
TTGTTAGTGGAAAGCTCGACCAAGCTCTGGCGCGCTCAACACAGAATAGC
GACGGCGAGATCGTTCCCAGTCGGAGGAGGACAGGCCGCATCCTCAGCGG
CCAGTTCGAGCACGGTCTTGCGCACTCAACACGGAGAAGCGGCGTCACGA
TCGCTCCAAGTCGTAGAGGGAGAGCTTGTTTCCGCGGCGCCCAAGCCGTT
TTACAACTTTTTGTACCTGATTTTCACTGGAGACACGCCCGCATCGTTGA
GACGTCGTGAGGAGCTGCGACGGATCTACGGGGACTACAATGGCGTCGCC
ACGGCAACTGATGGCGCCGGGGCGCAGCACCCTTACACGTTCCGGGTGCT
CTTCATCGCGCGGAAGCCCGGCGCGCCGCCCGACGGAGAGCTCGCCGGCG
ACCTGCTCTACCTGGACGTCGAGGACGGTTACTACCACATTGCCGCCAAG
ACGCTTGGGATGATGGGTGTCGTGACGCACTTCAACTTCGACTACGTTAT
GAAGGGCGACGAGGATACCTACGTCTGCTTCAACCTGCTGGCGTCGATCC
TCCACGCCGTGCCGGCCGAAGTCCGCGGCCGGGTCTATGCTGGCGTGCCG
ACCGCCTGCAACATTGCGCCGCGCAAGCCCATCGCCGGTCGGGTCATCCG
CGTCAAGCGGCACCGGTGGTACGACGAGCCCTTCATCCGGCATACGTTGA
ACGGCCTCGACTGCTACCCGGTGTACATGCAAGGCGCCTTCTACGTGCTG
GCCAAGCCGCTGGTGGACCTGCTCCACCGCAGCCGCGACCATCTGGTCGT
CTTCGGGAACGAGGACGCGACCATCGGCAGCTGGCTGCTGGGAACGAACC
GGGAGCTGCTGCCGCTGGGGCGCGTTGACAGCGAGCAGGTGTGGCGCTGC
CCGTGCTCGCACGGCATGGAGTGGCGGCCCGAGACGGCCAATATGACCTT
CTACCACAACTGCAAACACATGGACCAGCTGCGCAAGTGCTCGCTTTCCA
GGGATTCGGGGCACGAGCGGGCCCTCTGCTGA
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