mRNA_P-wetherbeei_contig136.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig136.4.1 vs. uniprot
Match: D8LT07_ECTSI (Beta-1,3-n-acetylglucosaminyltransferase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT07_ECTSI) HSP 1 Score: 261 bits (667), Expect = 3.990e-76 Identity = 125/288 (43.40%), Postives = 179/288 (62.15%), Query Frame = 2
Query: 344 LMASVRSSGTIVAKPFYNFVYLIFTGDTEADAESREELRRIYGDYRGVA------TATDGAGTR-HSYTLRVLFVARKAGAPRNGEVAGDVLYVDVESGYSHIAAKTRSMMAVVTHFDFDYLMKGDEDTFVCFNLLASVLHAVPPAARGRVYAGVPTACKLEPTKP--LTGSVIRVKRHKWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRGRDHLVVFGNEDTTLGSWLLGTNRELLPLGRIDSEQVWHCPCSHGMEWRPETANMTFYHKCKNIDQLRKC 1180
+M + GT +P + + IF+G TEADA RE LR+IY Y G + T+G +T+ V+FV K AP GE+ GD+LYV V GY +I KT++M+ +V HFDFD+L+K D+D+FVC +AS+LH + P RG+VY GVPTAC + T P G V++ H+W+D +++HTL GLDC+P YMQGAFY+LA+PLV+ L+RG +HL F NED T+GSWL+G +RE++ + + + +W C C+ F+H CK + QL+ C
Sbjct: 340 VMGELEPVGTAKTRPKVDLLLTIFSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEGKNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFDFLLKADDDSFVCLTRIASMLHDLDPEIRGKVYVGVPTACN-QSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLRTSHLWDCLCARTQITVKTRKKHMFFHNCKGLSQLKLC 626
BLAST of mRNA_P-wetherbeei_contig136.4.1 vs. uniprot
Match: A0A835YWI3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI3_9STRA) HSP 1 Score: 253 bits (646), Expect = 8.040e-76 Identity = 128/359 (35.65%), Postives = 203/359 (56.55%), Query Frame = 2
Query: 146 KRLCCEALVFAFVGALMTAIILELRSAGRDLFAGWFTKPEVLQTVSFVEGLSTIWSAPHEAATARSLMASVRSSGTIV------AKPFYNFVYLIFTGDTEADAESREELRRIYGDYRGVATATDGAGTRHSYTLRVLFVARKAGAPRNGEVAGDVLYVDVESGYSHIAAKTRSMMAVVTHFDFDYLMKGDEDTFVCFNLLASVLHAVPPAARGRVYAGVPTACKLEPTKPLTGSVIRVKRHKWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRGRDHLVVFGNEDTTLGSWLLGTNRELLPLGRIDSEQVWHCPCS-----HGMEWRPETANMTFYHKCKNIDQLRKCSLS 1189
+R+C E + +M ++ S G D + +LQ V+ ++ TI+ A AA A + SS I + P Y+ + ++F+GD+E DA+ R+ +RRIYG YRG G +R Y +++FV ++ AP +G + GD L ++ GY +I KT+ M++++ H +F YLMK D+DTFVC + LH +P + +VYAGVPT C + P + G V HKWYDE ++ HT+ ++CYP Y QGA Y+L++ LV+ L++GRDHL+ F NED T+G+WL+G +R ++ L +D ++W C C+ H + N F+H CK Q+ KC+++
Sbjct: 34 QRMCSETNPMYMMAPIMPGRTVQ--SLGED-------EQTLLQRVNLLQDQVTIFKAKASAAVALQQQQAKNSSRAIAEVVNDSSLPTYDMLLVVFSGDSEDDAKRRDLMRRIYGRYRGRVVLNRGKKSRKKYKFKLVFVRGRSDAPEDGVLNGDTLLINAPDGYRNIVHKTKGMVSLLKHVNFKYLMKSDDDTFVCVQQVFHRLHNLPEETKKKVYAGVPTHCNM-PGHQMVGRVFSDPTHKWYDERYVEHTMGSMECYPPYHQGAGYILSRSLVEFLYKGRDHLLTFINEDVTMGTWLMGVDRSVVSLRDLDGARLWECTCASYRFAHDAAFHKNHQNNAFFHNCKQAWQMLKCAIA 382
BLAST of mRNA_P-wetherbeei_contig136.4.1 vs. uniprot
Match: A0A6H5KLW3_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW3_9PHAE) HSP 1 Score: 246 bits (628), Expect = 2.910e-74 Identity = 116/265 (43.77%), Postives = 167/265 (63.02%), Query Frame = 2
Query: 413 FTGDTEADAESREELRRIYGDYRGVA------TATDGAGTR-HSYTLRVLFVARKAGAPRNGEVAGDVLYVDVESGYSHIAAKTRSMMAVVTHFDFDYLMKGDEDTFVCFNLLASVLHAVPPAARGRVYAGVPTACKLEPTKP--LTGSVIRVKRHKWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRGRDHLVVFGNEDTTLGSWLLGTNRELLPLGRIDSEQVWHCPCSHGMEWRPETANMTFYHKCKNIDQLRKC 1180
F ++ADA RE LR+IY Y G + T+G +T+ V+FV K AP GE+ GD+LYV V GY +I KT++M+ +V HFDF++L+K D+D+FVC +AS+LH + P G+VYAGVPTAC + T P G V++ H+W+D +++HTL GLDC+P YMQGAFY+LA+PLV+ L+RG +HL F NED T+GSWL+G +RE++ + + + +W C C+ F+H CK + QL+ C
Sbjct: 27 FPAASQADAAKRELLRQIYDKYEGWVKVGGPNSLTEGTNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEISGKVYAGVPTACN-QSTNPDYWNGRVMKNPDHRWFDSKYVQHTLGGLDCFPAYMQGAFYILAQPLVEHLYRGHEHLECFTNEDVTIGSWLMGVDREMVEMYNLHTSHLWDCLCARTQITVKTRRKQMFFHNCKGLSQLKLC 290
BLAST of mRNA_P-wetherbeei_contig136.4.1 vs. uniprot
Match: A0A6H5JHW0_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW0_9PHAE) HSP 1 Score: 247 bits (631), Expect = 2.990e-73 Identity = 119/271 (43.91%), Postives = 163/271 (60.15%), Query Frame = 2
Query: 383 KPFYNFVYLIFTGDTEADAESREELRRIYGDYRGVATATDGAGTRHSYTLRVLFVARKAGAPRNGEVAGDVLYVDVESGYSHIAAKTRSMMAVVTHFDFDYLMKGDEDTFVCFNLLASVLHAVPPAARGRVYAGVPTACKLEPTKP--LTGSVIRVKRHKWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRGRDHLVVFGNEDTTLGSWLLGTNRELLPLGRIDSEQVWHCPCSHGMEWRPETANMTFYHKCKNIDQLRKCSLS 1189
+P+++++ ++F+GD R+ +R +YG Y G TD G YT +VL+V GA G++ DVL+V VE GY +IAAKT+ M+ V H F YL+K D+DTFVC AS +H VP + +VY G+PTAC L P P G VI KWYD ++ HT+NGLDCYPVYMQGAFY+L+ PLV+ L++G L+ F NED T+G WL G +R + PL + +VW C C + P F+H CK++D LR C S
Sbjct: 142 RPYFDYLLVVFSGDDTDALAKRDYMREMYGTYGGQILITDERGQAFIYTFKVLYVVGHPGAVDMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKTDDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHL-PNNPNDAVGKVIVDMDDKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARVWECSCKRP-NFNPGGDANVFFHNCKSMDDLRGCKAS 410
BLAST of mRNA_P-wetherbeei_contig136.4.1 vs. uniprot
Match: A0A835YNB7_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB7_9STRA) HSP 1 Score: 240 bits (613), Expect = 3.940e-73 Identity = 105/218 (48.17%), Postives = 149/218 (68.35%), Query Frame = 2
Query: 530 LRVLFVARKAGAPRNGEVAGDVLYVDVESGYSHIAAKTRSMMAVVTHFDFDYLMKGDEDTFVCFNLLASVLHAVPPAARGRVYAGVPTACKLEPTKPLTGSVIRVKRHKWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRGRDHLVVFGNEDTTLGSWLLGTNRELLPLGRIDSEQVWHCPCSHGMEWRPETANMTFYHKCKNIDQLRKCS 1183
++VLF+ A G++ GD+LYV +GY +I KT++M+++VTHF+ YLMK D+DTFVC N +A + +PPA + +VYAG+PTAC LE + P G VI+ HKW+D F+ HTL GLDCYP Y QGAFY+L++PLV LH+GR L+ F NED T+GSWL+G +RE++ I ++W C C+ +W N F+H CK++DQL+KC+
Sbjct: 1 MQVLFLVSHIDASEEGDLVGDILYVQCPAGYRNIVQKTKAMLSIVTHFNHKYLMKSDDDTFVCLNRVAKRMFTLPPAVKEKVYAGIPTACGLE-SNPHIGRVIKDPNHKWHDAKFVSHTLGGLDCYPAYHQGAFYLLSEPLVQYLHQGRSKLLTFTNEDVTMGSWLMGVDREMIAFNSISEARLWECTCAKYTKWLKYDTN-AFFHNCKSLDQLQKCA 216
BLAST of mRNA_P-wetherbeei_contig136.4.1 vs. uniprot
Match: D7FQB9_ECTSI (Hexosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB9_ECTSI) HSP 1 Score: 246 bits (627), Expect = 3.480e-72 Identity = 121/282 (42.91%), Postives = 168/282 (59.57%), Query Frame = 2
Query: 356 VRSSGTIVA--KPFYNFVYLIFTGDTEADAESREELRRIYGDYRGVATATDGAGTRHSYTLRVLFVARKAGAPRNGEVAGDVLYVDVESGYSHIAAKTRSMMAVVTHFDFDYLMKGDEDTFVCFNLLASVLHAVPPAARGRVYAGVPTACKLEPTKP--LTGSVIRVKRHKWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRGRDHLVVFGNEDTTLGSWLLGTNRELLPLGRIDSEQVWHCPCSHGMEWRPETANMTFYHKCKNIDQLRKCSLS 1189
VRS G++ + +++++ ++F+GD R+ +R++YG Y G TD G YT +VL+V GA G++ DVL+V VE GY +IAAKT+ M+ V H F YL+K D+DTFVC AS +H VP + +VY G+PTAC L P P G VI KWYD ++ HT+NGLDCYPVYMQGAFY+L+ PLV+ L++G L+ F NED T+G WL G +R + PL + ++W C C + P F+H CK +D LR C S
Sbjct: 171 VRSQGSLGGDTRAYFDYLLVVFSGDDTDALAKRDYMRKMYGTYGGQILITDERGQAFIYTFKVLYVVGHPGAADMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKADDDTFVCLRRTASQMHLVPAHIKPKVYGGIPTACHL-PNNPDDEVGKVIVDMDEKWYDGKYLNHTMNGLDCYPVYMQGAFYILSYPLVEFLNQGSSKLLTFDNEDVTIGLWLHGVDRAIFPLNDLRDARMWECSCKRP-NFNPGGDANVFFHGCKGMDDLRGCKAS 450
BLAST of mRNA_P-wetherbeei_contig136.4.1 vs. uniprot
Match: D7G6P0_ECTSI (Hexosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P0_ECTSI) HSP 1 Score: 226 bits (576), Expect = 1.440e-64 Identity = 113/252 (44.84%), Postives = 158/252 (62.70%), Query Frame = 2
Query: 386 PFYNFVYLIFTGDTEADAESREELRRIYGDYRG-VATATDGAGTRHSYTL----RVLFVARKAGAPRNGEVAGDVLYVDVESGYSHIAAKTRSMMAVVTHFDFDYLMKGDEDTFVCFNLLASVLHAVPPAARGRVYAGVPTACKLEPTKPLT--GSVIRVKRHKWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRGRDHLVVFGNEDTTLGSWLLGTNRELLPLGRIDSEQVWHCPCSHGMEWRP 1120
P + + I +GD +A R+ +R +Y Y G V + + ++ T+ +V+FV ++ AP +GE+ GDVLYV+ GY +I K + MM +V H DF +L+K D+DTFVC LA+ LH P ++ ++YAGVPTAC P P G VI+ + KWYD+ F+ HTL GLDCYPVYMQGAFYVLA+PLV+ L+RGR+H F NED T+GSWLLG +R L + +S ++W+C C RP
Sbjct: 179 PRTDLLLAILSGDDKAARLKRDTIRELYDKYGGWVTVGGERSQEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIYAGVPTACN-SPANPSVKVGRVIKDHKDKWYDQKFVHHTLAGLDCYPVYMQGAFYVLAQPLVEHLYRGREHYDTFINEDVTVGSWLLGVDRALGTIHDFESSRLWNCVCGSNFVLRP 429
BLAST of mRNA_P-wetherbeei_contig136.4.1 vs. uniprot
Match: A0A835YTA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA1_9STRA) HSP 1 Score: 179 bits (453), Expect = 6.480e-46 Identity = 99/259 (38.22%), Postives = 138/259 (53.28%), Query Frame = 2
Query: 563 APRNGEVAGDVLYVDVESGYSHIAAKTRSMMAVVTHFDFDYLMKGDEDTFVCFNLLASVLH---------------------------------------------------AVPPAARGRVYAGVPTACKLEPTKPLTGSVIRVKRHKWYDEPFIRHTLNGLDCYPVYMQGAFYVLAKPLVDLLHRGRDHLVVFGNEDTTLGSWLLGTNRELLPLGRIDSEQVWHCPCSHGMEWRPETANMT--FYHKCKNIDQLRKC 1180
AP +G + GDV +V GY++IA T+ MMA+ HF F +L K + DTFVC L ++L A A + R+YAGVPTAC + P G VI K ++WYD F+ HT+ GL CYPVYMQGAFYVLA+PLV+ L+ GR H V F NED T+GSWLLG +R+++ + I + ++W C CS ++ P+ A + F+H CK +++LR+C
Sbjct: 311 APDDGRLDGDVFWVRAPPGYNNIAEMTKQMMAL--HFLFRFLSKINGDTFVCLRRLVTLLAVQXXXXXXXXXXXXXXXXXXXRLVQXXXXXXXXXXXXXXXXXXXXXVTLLAAQTQATQRRLYAGVPTACGVHRNNPNVGRVIMDKTNRWYDPKFVTHTMGGLPCYPVYMQGAFYVLAQPLVEFLNLGRPHWVTFQNEDVTVGSWLLGVDRDIVTIDDITTARLWGCQCS--LDTMPQWARKSSVFFHDCKALEKLRRC 565
BLAST of mRNA_P-wetherbeei_contig136.4.1 vs. uniprot
Match: A0A7S4FDN2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FDN2_CHRCT) HSP 1 Score: 80.9 bits (198), Expect = 3.040e-12 Identity = 48/152 (31.58%), Postives = 76/152 (50.00%), Query Frame = 2
Query: 596 LYVDVESGYSHIAAKTRSMMAVVTH--FDFDYLMKGDEDTFVCFNLLASVLHA--VPPAARGRVYAGVPTACKLEPTKPLTGSVIRVKRHKWYDEPFIRHTLNG--LDCYPVYMQGAFYVLAKPLVDLLHRGRDHLVVFGNEDTTLGSWLLG 1033
L ++ GY + K ++MM + FD+L+K D DTF+CF ++ ++ + R+Y G C V+ + K+YD+ ++ L +DCYP YMQG YVL++ LV L+ L V+ NED +G WL+G
Sbjct: 167 LKLNAADGYLQLGHKIKAMMQWIASRVIRFDFLLKADLDTFICFTMVTDLIDTMRIRFGTDQRIYLGHLETCSR---------VVHHPQDKFYDKHYLEDVLQSQNVDCYPPYMQGLGYVLSRDLVQLIGFMAPTLKVYTNEDMMVGIWLVG 309
BLAST of mRNA_P-wetherbeei_contig136.4.1 vs. uniprot
Match: A0A224XSV4_9HEMI (Hexosyltransferase n=3 Tax=Triatominae TaxID=70999 RepID=A0A224XSV4_9HEMI) HSP 1 Score: 68.9 bits (167), Expect = 3.730e-9 Identity = 50/165 (30.30%), Postives = 77/165 (46.67%), Query Frame = 2
Query: 587 GDVLYVDVESGYSHIAAKT-RSMMAVVTHFDFDYLMKGDEDTFVCFNLLASVLHAVPPAARGRVYAGVPTACKLEPTKPLTGSVIRVKRHKWYDEPFIRHTLNGLDC--YPVYMQGAFYVLAKPLVDLLHRGRDHLVVFGNEDTTLGSWLLGTNRELLPLGRIDS 1072
GD+L V V Y +++ K RS V + +DF YL+K D+DTF+ L + VP + +Y G +G+ +R KW + LN C Y Y G Y+L K LVD + + D+ ++ +ED T+G+WL N + R D+
Sbjct: 99 GDILLVPVVDTYGNLSLKVLRSFQEVNSVYDFTYLIKTDDDTFLHIQELKKAIRLVP---KQFLYWGY-----------FSGNARVYRRGKWKE-------LNWFLCDRYLPYALGGAYILTKDLVDFIAKNGDNFRLYRSEDVTVGTWLAPLNVYRMHDARFDT 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig136.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig136.4.1 >prot_P-wetherbeei_contig136.4.1 ID=prot_P-wetherbeei_contig136.4.1|Name=mRNA_P-wetherbeei_contig136.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=416bp HVLPTFQRNRLHRTSSSPPTACHCVDIGASCERRRRTLPGFREQENGQEKback to top mRNA from alignment at P-wetherbeei_contig136:4663..6217- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig136.4.1 ID=mRNA_P-wetherbeei_contig136.4.1|Name=mRNA_P-wetherbeei_contig136.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1555bp|location=Sequence derived from alignment at P-wetherbeei_contig136:4663..6217- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig136:4663..6217- >mRNA_P-wetherbeei_contig136.4.1 ID=mRNA_P-wetherbeei_contig136.4.1|Name=mRNA_P-wetherbeei_contig136.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1248bp|location=Sequence derived from alignment at P-wetherbeei_contig136:4663..6217- (Phaeothamnion wetherbeei SAG_119_79)back to top |