mRNA_P-wetherbeei_contig1359.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1359.2.2
Unique NamemRNA_P-wetherbeei_contig1359.2.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1359.2.2 vs. uniprot
Match: D7G200_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G200_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 2.680e-92
Identity = 185/403 (45.91%), Postives = 232/403 (57.57%), Query Frame = 2
Query:    8 MKIVAGSYEGFCYGWDADMSGGTAVASXXXXXXXXXXER----------------------KPAASLSFGTHVHQGCVKAVAMATSGKLAGRLLVTGGADERIRIFDLDARSEVGELQHHSGTINCLEFVGSTHLLSGSDDGTLCIWRVYDWALLHMLGGHKAAVADLCAHPSGRMALSVARDRTLRLWNLVEGRAAYIKRLPGAAELVRWSPAGDRFVVVITDALHIYDAATCAPVATCRHPVRVGGACFVPGGGNGGXXXXDCGDLVVTTADDNMLRAFAAATGEAIWEVSAADDAG-GRVRALAFVPNAAAVVAAGVKGARTAEGGRDESTNGDGXXXXWIVTSSTAGVVRAWSVA---GVGAXXXXXXXXXTDSKAAPAVCVLR-RAVRGEPRFTSVAA 1135
            M+IVAG+YEGFCYGW+++ +   AV +           +                          SL FG +VH GC+K+VA+ATSG  AG+LLVTGGADER+RI+DL  R+E+GELQ H+GTI C+EF  STHLL+GS+D T+CIWRV+DWALLH+LGGHKAAV  L  HPSGRMALSV+RDRTLRLWNL+EGR AYIKRL G  ELV+WSPAGD ++VV+   + +Y AAT   V  CRH  RV  ACF   GG GG         V T ADD  +R F    G  + +V  +D    GR+R +  V        A            D + +G G     + T ++ G V  W V    GVGA           S A   V +L   +++GEPRFT V A
Sbjct:    1 MRIVAGTYEGFCYGWESNNTESAAVGAESLSGTTTTDTKGVKNXXXXXXXXXXXXXXXXTPPQPLSLVFGYNVHVGCMKSVAIATSGSRAGQLLVTGGADERVRIYDLRDRTELGELQQHNGTITCMEFYKSTHLLTGSEDHTVCIWRVHDWALLHVLGGHKAAVTSLSIHPSGRMALSVSRDRTLRLWNLLEGRCAYIKRLQGEGELVKWSPAGDSYLVVVGSTVSVYSAATSEAVGECRHDARVNSACFT--GGKGGKGAV----AVATCADDKTIRFFRTEGGTLLGKVDVSDVCPTGRIRDMCHV-------GADAXXXXXXXXXXDRACSGGGS----LATVTSTGGVHVWGVPTLEGVGAEG---------SGAELTVPLLSTHSLKGEPRFTCVTA 377          
BLAST of mRNA_P-wetherbeei_contig1359.2.2 vs. uniprot
Match: A0A836CGS2_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGS2_9STRA)

HSP 1 Score: 288 bits (736), Expect = 1.750e-85
Identity = 173/397 (43.58%), Postives = 220/397 (55.42%), Query Frame = 2
Query:    8 MKIVAGSYEGFCYGWDADMSGGTAVASXXXXXXXXXXERKPAASLSFGTHVHQGCVKAVAMATSGKLAGRLLVTGGADERIRIFDLDARSEVGELQHHSGTINCLEFVGSTHLLSGSDDGTLCIWRVYDWALLHMLGGHKAAVADLCAHPSGRMALSVARDRTLRLWNLVEGRAAYIKRLPGAAELVRWSPAGDRFVVVITDALHIYDAATCAPVATCRHPVRVGGACFVPGGGNGGXXXXDCGDLVVTTADDNMLRAFAAATGEAIWEVSAADDAGGRVRALAFVPN---------------------AAAVVAAGVKGARTAEGGRDESTNGDGXXXXWIVTSSTAGVVRAWSVAGVGAXXXXXXXXXTDSKAAPAVCVLRRAVRGEPRFTSVAA 1135
            MKIV G+ EGF YG+D      TA  +                S+++G  VH GCVK++A+A  G LAG++LVTGG DERIRI+DL  R+E GELQ HSGT+ CL F  STHLLSGS+D T+CIWRV+DWALLH+LGGHK AV DL  HPSGRMALSV+ DRTLRLWNLVEGRAAYIKRLPG  ++VRWSP G  F VV+   L +Y+AA   P  T   P+++    ++                V   ADD+++R ++A TG+ + E+ A    GGRVR +A+ P                      AAA VA G     T + GR             +VT ++ G V+ W +               D  +  A  V    V GEPRFT + A
Sbjct:    1 MKIVGGTLEGFLYGFDHPDDEATAPDTL---------------SMAYGYKVHAGCVKSLAIAEKGTLAGKMLVTGGTDERIRIYDLGQRTEKGELQQHSGTVTCLAFHDSTHLLSGSEDKTICIWRVHDWALLHVLGGHKGAVTDLSIHPSGRMALSVSTDRTLRLWNLVEGRAAYIKRLPGGGDMVRWSPQGTHFAVVVGKQLILYEAAASEPACTRSCPLKINAMAWLND------------TTVAAAADDHVIRVYSA-TGDVLAELPAEAACGGRVRDMAYTPTLTLALGLGDSGGAAAHDPEETAAAEVAVGASALGTEQRGR-------------LVTVTSTGTVQVWELK-------------LDGGSCSATVVAHTRVLGEPRFTCLVA 343          
BLAST of mRNA_P-wetherbeei_contig1359.2.2 vs. uniprot
Match: A0A7R9Y9Y4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9Y4_9STRA)

HSP 1 Score: 216 bits (550), Expect = 4.950e-62
Identity = 111/257 (43.19%), Postives = 153/257 (59.53%), Query Frame = 2
Query:   14 IVAGSYEGFCYGWDADMSGGTAVASXXXXXXXXXXERKPAASLSFGTHVHQGCVKAVAMATSGKLAGRLLVTGGADERIRIFDLDARSEVGELQHHSGTINCLEFVGSTHLLSGSDDGTLCIWRVYDWALLHMLGGHKAAVADLCAHPSGRMALSVARDRTLRLWNLVEGRAAYIKRLPGAAELVRWSPAGDRFVVVITDALHIYDAATCAPVATCRHPVRVGGACFVPGGGNGGXXXXDCGDLVVTTADDNMLRAF 784
            +VAG+Y G   G   +   G+              ++     LSF    H GC+K++A+ T+ K  G LLV+GG DERIRI+DL  ++EVGELQ H+G + CL FVGSTHLLSGS D T+CIWRV+DW  L +LG H   V DL  HPSGR+ALSVA+DRT+RLW+L++GR A+ +R+ G AE V+W   G  + ++I   + +++AA  + V    H  R     F+PG G            ++T  DD +LR F
Sbjct:    7 VVAGTYYGDLIGLSTEKPEGSEAKESAP-------DQPSPLQLSFAYRAHIGCIKSLALCTTQKRGGALLVSGGTDERIRIYDLALKAEVGELQQHNGAVTCLAFVGSTHLLSGSTDSTICIWRVHDWNCLQILGDHSGEVLDLAVHPSGRVALSVAKDRTIRLWDLIKGRCAFTRRVRGIAEQVQWDEEGSMYAILIGRDVQVHNAADNSVVCKLEHEKRTNAFKFLPGIGT-----------ILTAGDDRLLRFF 245          
BLAST of mRNA_P-wetherbeei_contig1359.2.2 vs. uniprot
Match: A0A7R9U2R5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2R5_9STRA)

HSP 1 Score: 218 bits (554), Expect = 2.080e-61
Identity = 117/288 (40.62%), Postives = 165/288 (57.29%), Query Frame = 2
Query:   14 IVAGSYEGFCYGWDADMSGGTAVASXXXXXXXXXXERKPAASLSFGTHVHQGCVKAVAMATSGKLAGRLLVTGGADERIRIFDLDARSEVGELQHHSGTINCLEFVGSTHLLSGSDDGTLCIWRVYDWALLHMLGGHKAAVADLCAHPSGRMALSVARDRTLRLWNLVEGRAAYIKRLPGAAELVRWSPAGDRFVVVITDALHIYDAATCAPVATCRHPVRVGGACFVPGGGNGGXXXXDCGDLVVTTADDNMLRAFAAATGEAIWEVSAADDAGGRVRALAFVPNAA 877
            +VAG+Y G   G   +   G+              ++     LSF    H GC+K++A+ T+ K  G LLV+GG DERIRI+DL  ++EVGELQ H+G + CL FVGSTHLLSGS D T+CIWRV+DW  L +LG H   V DL  HPSGR+ALSVA+DRT+RLW+L++GR A+ +R+ G AE V+W   G  + ++I   + +++AA  + V    H  R     F+PG G            ++T  DD +LR F  + G  + ++  +     R+R L    N A
Sbjct:    7 VVAGTYYGDLIGLSTEKPEGSEAKESAP-------DQPSPLQLSFAYRAHIGCIKSLALCTTQKRGGALLVSGGTDERIRIYDLALKAEVGELQQHNGAVTCLAFVGSTHLLSGSTDSTICIWRVHDWNCLQILGDHSGEVLDLAVHPSGRVALSVAKDRTIRLWDLIKGRCAFTRRVRGIAEQVQWDEEGSMYAILIGRDVQVHNAADNSVVCKLEHEKRTNAFKFLPGIGT-----------ILTAGDDRLLRFFRVSDGSLVRQLDLSTVFPFRIRDLCLHENQA 276          
BLAST of mRNA_P-wetherbeei_contig1359.2.2 vs. uniprot
Match: K8ZAK0_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAK0_NANGC)

HSP 1 Score: 210 bits (535), Expect = 9.960e-58
Identity = 119/283 (42.05%), Postives = 151/283 (53.36%), Query Frame = 2
Query:   17 VAGSYEGFCYGWDADMSGGTAVASXXXXXXXXXXERKPAASLSFGTHVHQGCVKAVAMATSGKLAGRLLVTGGADERIRIFDLDARSEVGELQHHSGTINCLEFVGSTHLLSGSDDGTLCIWRVYDWALLHMLGGHKAAVADLCAHPSGRMALSVARDRTLRLWNLVEGRAAYIKRLPGAAELVRWSPAGDRFVVVITDA-LHIYDAATCAPVATCRHPVRVGGACFVPGGGNGGXXXXDCGDL------------------VVTTADDNMLRAFAAATGEAI 808
            VAG+Y+G   GW+    G                       + F    HQG V+++A+   G  AG LLV+GG DE IR++DL  R+EVGEL HH GTI  L FVGS+HLLSGS+DG +CIWRVYDW+LLH+LGGHK A+  +  HPSG++ALS  RDR+LRLW+LV GR AYI +L    E V+WS  G  + + + D  L +  A+   P A   HP RV    F+P           C D                   VVT  DD MLR     TG  +
Sbjct:   29 VAGTYDGGIAGWELQREGQNQTTGL---------------KMIFAYTPHQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAA-----AAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVL 291          
BLAST of mRNA_P-wetherbeei_contig1359.2.2 vs. uniprot
Match: W7TL70_9STRA (Pak1ip1 protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TL70_9STRA)

HSP 1 Score: 205 bits (522), Expect = 4.840e-56
Identity = 110/235 (46.81%), Postives = 138/235 (58.72%), Query Frame = 2
Query:  161 HQGCVKAVAMATSGKLAGRLLVTGGADERIRIFDLDARSEVGELQHHSGTINCLEFVGSTHLLSGSDDGTLCIWRVYDWALLHMLGGHKAAVADLCAHPSGRMALSVARDRTLRLWNLVEGRAAYIKRLPGAAELVRWSPAGDRFVVVITDA-LHIYDAATCAPVATCRHPVRVGGACFVPGGGNGGXXXXDCGDL------------------VVTTADDNMLRAFAAATGEAI 808
            HQG V+++A+   G  AG LLV+GG DE IR++DL  R+EVGEL HH GTI  L FVGS+HLLSGS+DG +CIWRVYDW+LLH+LGGHK A+  +  HPSG++ALS  RDR+LRLW+LV GR AYI +L    E V+WS  G  + + + D  L +  A+   P A   HP RV    F+P           C D                   VVT  DD MLR     TG  +
Sbjct:   45 HQGSVRSLAIPQGGVKAGSLLVSGGVDEHIRMYDLRKRAEVGELLHHKGTITALGFVGSSHLLSGSEDGAVCIWRVYDWSLLHILGGHKGAITAVAIHPSGKLALSSGRDRSLRLWDLVRGRCAYITKLEAVVETVKWSGDGSVYALQVGDRRLEVRRASDNKPTAIATHPARVTAIAFLPAAA-----AAPCADEAKSLEISAAIEQQAPMHHVVTACDDGMLRVVDGDTGSVL 274          
BLAST of mRNA_P-wetherbeei_contig1359.2.2 vs. uniprot
Match: A0A8K1FGB7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGB7_PYTOL)

HSP 1 Score: 198 bits (504), Expect = 7.950e-54
Identity = 120/338 (35.50%), Postives = 178/338 (52.66%), Query Frame = 2
Query:    5 VMKIVAGSYEGFCYGWDADMSGGTAVASXXXXXXXXXXERKPAA-SLSFGTHVHQGCVKAVAMATSGKLAGRLLVTGGADERIRIFDLDARSEVGELQHHSGTINCLEFVGSTHLLSGSDDGTLCIWRVYDWALLHMLGGHKAAVADLCAHPSGRMALSVARDRTLRLWNLVEGRAAYIKRLPGAAELVRWSPAGDRFVVVITDALHIYDAATCAPVATCRHPVRVGGACFVPGGGNGGXXXXDCGDLVVTTADDNMLRAFAAATGEAIWEVSAADDAGGRVRALAFVPNAAAVVAAGVKGARTAEGGRDESTNGDGXXXXWIVTSSTAGVVRAWSVA 1015
            +++IVAG+YEG  YGW+  ++                  +KP    L+FG   H  C+K+V++ T+ +  G+ L++GG DE I+I++++ R EVG L  H G + CLEF G +H+LSGS D ++CIWR  DW  LH+LGGHKA +  +  HPSG++A SVARDRTLR+WNLV+GR AYI+RL   A  V  S +G R+ +     + ++ +A    V    H  +V  A F               + VV   +D  +  + A TG  + +V+ AD    R+R +  V             AR AE               WIV +S++G V+ W +A
Sbjct:    1 MIRIVAGTYEGLLYGWELPVTA-----------------KKPTKMKLTFGYSAHAECIKSVSLMTAKE--GKTLISGGNDEMIKIYNVNKRVEVGTLMEHKGAVTCLEFFGQSHMLSGSADNSICIWRTSDWNCLHILGGHKAEITSMAVHPSGKLAFSVARDRTLRMWNLVKGRIAYIRRLEKEASSVVMSQSGSRYALSFGSDVSVFSSANAEVVGMLEHSDKVHAAVFATD------------EYVVCGGEDKCIYVWKA-TGSLVAKVTHADIIS-RIRCMEVVY------------ARGAE------------ELPWIVVASSSGAVQVWDLA 281          
BLAST of mRNA_P-wetherbeei_contig1359.2.2 vs. uniprot
Match: A0A6G0XFJ4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFJ4_9STRA)

HSP 1 Score: 197 bits (500), Expect = 3.620e-53
Identity = 123/336 (36.61%), Postives = 178/336 (52.98%), Query Frame = 2
Query:    8 MKIVAGSYEGFCYGWDADMSGGTAVASXXXXXXXXXXERKPAASLSFGTHVHQGCVKAVAMATSGKLAGRLLVTGGADERIRIFDLDARSEVGELQHHSGTINCLEFVGSTHLLSGSDDGTLCIWRVYDWALLHMLGGHKAAVADLCAHPSGRMALSVARDRTLRLWNLVEGRAAYIKRLPGAAELVRWSPAGDRFVVVITDALHIYDAATCAPVATCRHPVRVGGACFVPGGGNGGXXXXDCGDLVVTTADDNMLRAFAAATGEAIWEVSAADDAGGRVRALAFVPNAAAVVAAGVKGARTAEGGRDESTNGDGXXXXWIVTSSTAGVVRAWSVA 1015
            ++IVAG+YEG  YGW+A M   T              E K A  + +G   H  C+KAVA  T  +  G+ L+TGG DE I+I+++  + EVG L  H G I CLE+ G +H+LSGS D T+CIWR  DW  +H+LGGHK  V  +  HPSG++A SVARD+TLR+WNLV+GR+AYI+RL   A  V  S  G+R+ +V+   + I+ +     + +  H  +V  A F               DLVV   DD +L  + A  G+ + ++S  D    R+R +  V                    ++ES    G    ++V +ST GVV+ + +A
Sbjct:    6 LQIVAGTYEGMLYGWEAPMDSLTEK------------EPKSALKMIYGYPAHTECIKAVA--TMMETDGKTLLTGGNDEMIKIYNVKKKVEVGILMQHKGAITCLEYYGKSHVLSGSADNTICIWRTSDWNCIHILGGHKGPVNSIAVHPSGKLAFSVARDKTLRMWNLVKGRSAYIRRLDQEATCVFLSQDGNRYGLVMGSDVSIFGSTNAELIGSLEHKKKVHTAAFATN------------DLVVLGTDDGILFLYRA-EGQLLAKISHPDITA-RIRCIKVVQ-------------------KEES----GVSLPFVVLASTNGVVQVYDLA 290          
BLAST of mRNA_P-wetherbeei_contig1359.2.2 vs. uniprot
Match: A0A024GIW4_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GIW4_9STRA)

HSP 1 Score: 194 bits (492), Expect = 3.750e-52
Identity = 105/257 (40.86%), Postives = 140/257 (54.47%), Query Frame = 2
Query:    5 VMKIVAGSYEGFCYGWDADMSGGTAVASXXXXXXXXXXERKPAASLSFGTHVHQGCVKAVAMATSGKLAGRLLVTGGADERIRIFDLDARSEVGELQHHSGTINCLEFVGSTHLLSGSDDGTLCIWRVYDWALLHMLGGHKAAVADLCAHPSGRMALSVARDRTLRLWNLVEGRAAYIKRLPGAAELVRWSPAGDRFVVVITDALHIYDAATCAPVATCRHPVRVGGACFVPGGGNGGXXXXDCGDLVVTTADDNML 775
            +++I AG+Y+G  YGWDA                      K    L FG   H  CVK+     S    G++L++G +DE I+I+D+D R EVG L   SG+I CLEF   TH+LS S D T+CIWRV DW  LH+LGGHK  +  +  HPSG++A SVARD+TLR+WNLV GR AYI+RL   AE+V+ S  G R+++     + I+  +    V T +HP RV    F               DLVV   +D  L
Sbjct:    1 MLRIAAGTYDGILYGWDA----------IPMAEEKHSDATKWTLKLRFGYSAHSECVKSAVFMKSRN--GKILLSGSSDETIKIYDVDKRVEVGTLMEQSGSITCLEFFQQTHVLSASTDKTVCIWRVSDWNCLHILGGHKEEINSITIHPSGKLAFSVARDQTLRMWNLVNGRCAYIRRLEKEAEIVKISTLGKRYLLTFGSVVSIFSTSDAELVGTLKHPKRVHACVFATD------------DLVVCAGEDKHL 233          
BLAST of mRNA_P-wetherbeei_contig1359.2.2 vs. uniprot
Match: F0WFN4_9STRA (p21activated protein kinaseinteracting protein putat n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WFN4_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.170e-51
Identity = 105/257 (40.86%), Postives = 143/257 (55.64%), Query Frame = 2
Query:    5 VMKIVAGSYEGFCYGWDADMSGGTAVASXXXXXXXXXXERKPAASLSFGTHVHQGCVKAVAMATSGKLAGRLLVTGGADERIRIFDLDARSEVGELQHHSGTINCLEFVGSTHLLSGSDDGTLCIWRVYDWALLHMLGGHKAAVADLCAHPSGRMALSVARDRTLRLWNLVEGRAAYIKRLPGAAELVRWSPAGDRFVVVITDALHIYDAATCAPVATCRHPVRVGGACFVPGGGNGGXXXXDCGDLVVTTADDNML 775
            +++I AG+Y G  YGWDA      +  S           +K    L FG   H  C+K+ A   S    G++L++G +DE I+I+D D R EVG L   SG+I CLEF   THLLS S D T+CIWRV DW  LH+LGGHK  ++ +  HPSG++A SVARD+TLR+WNLV GR AYI+RL   AE+VR S  G R+++   + + I+  +    + T  HP R+    F               DLVV   +D  +
Sbjct:    1 MLRIAAGTYGGILYGWDAIPVDDKSNTS----------SKKWQLKLRFGYSAHSECIKSAAFMKSRN--GKILLSGSSDETIKIYDADKRIEVGTLMEQSGSITCLEFFQHTHLLSASTDKTVCIWRVSDWNCLHVLGGHKEEISAIAIHPSGKLAFSVARDQTLRMWNLVNGRCAYIRRLEKEAEIVRISTLGKRYLLTFGNVVSIFCTSDAELIGTLTHPKRMHACVFATD------------DLVVCAGEDRHI 233          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1359.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G200_ECTSI2.680e-9245.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CGS2_9STRA1.750e-8543.58WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7R9Y9Y4_9STRA4.950e-6243.19Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9U2R5_9STRA2.080e-6140.63Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
K8ZAK0_NANGC9.960e-5842.05Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
W7TL70_9STRA4.840e-5646.81Pak1ip1 protein n=1 Tax=Nannochloropsis gaditana T... [more]
A0A8K1FGB7_PYTOL7.950e-5435.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0XFJ4_9STRA3.620e-5336.61Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024GIW4_9STRA3.750e-5240.86Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]
F0WFN4_9STRA1.170e-5140.86p21activated protein kinaseinteracting protein put... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1359contigP-wetherbeei_contig1359:2590..4759 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G200
Preferred namePAK1IP1
PFAMsWD40
Model size1879
Max annot lvl2759|Eukaryota
KEGG koko:K11684,ko:K14830,ko:K18272
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0000460,GO:0000463,GO:0000466,GO:0000470,GO:0001932,GO:0001933,GO:0003674,GO:0004857,GO:0004860,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006469,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008283,GO:0009892,GO:0009966,GO:0009987,GO:0010467,GO:0010563,GO:0010605,GO:0010646,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019207,GO:0019210,GO:0019220,GO:0019222,GO:0019887,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0030234,GO:0030684,GO:0030685,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032502,GO:0032886,GO:0032956,GO:0032970,GO:0032991,GO:0033043,GO:0033673,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0042325,GO:0042326,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0045859,GO:0045936,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0051493,GO:0060021,GO:0060255,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070507,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0098772,GO:1901360,GO:1901796,GO:1902531,GO:1990904
Exons3
Evalue1.93e-93
EggNOG OGsKOG0294@1|root,KOG0294@2759|Eukaryota
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-07_003530.1
Descriptionribosomal large subunit biogenesis
Cds size1824
COG categoryO
BRITEko00000,ko03009,ko03036,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185991.3390827-UTR-P-wetherbeei_contig1359:2589..26371683185991.3390827-UTR-P-wetherbeei_contig1359:2589..2637Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1359 2590..2637 -
1683185991.3918643-UTR-P-wetherbeei_contig1359:4752..47591683185991.3918643-UTR-P-wetherbeei_contig1359:4752..4759Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1359 4753..4759 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185991.3565207-CDS-P-wetherbeei_contig1359:2637..38951683185991.3565207-CDS-P-wetherbeei_contig1359:2637..3895Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1359 2638..3895 -
1683185991.371393-CDS-P-wetherbeei_contig1359:4035..42571683185991.371393-CDS-P-wetherbeei_contig1359:4035..4257Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1359 4036..4257 -
1683185991.3809292-CDS-P-wetherbeei_contig1359:4408..47521683185991.3809292-CDS-P-wetherbeei_contig1359:4408..4752Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1359 4409..4752 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1359.2.2prot_P-wetherbeei_contig1359.2.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1359 2638..4752 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1359.2.2

>prot_P-wetherbeei_contig1359.2.2 ID=prot_P-wetherbeei_contig1359.2.2|Name=mRNA_P-wetherbeei_contig1359.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=608bp
MKIVAGSYEGFCYGWDADMSGGTAVASSSGAAAAAGEERKPAASLSFGTH
VHQGCVKAVAMATSGKLAGRLLVTGGADERIRIFDLDARSEVGELQHHSG
TINCLEFVGSTHLLSGSDDGTLCIWRVYDWALLHMLGGHKAAVADLCAHP
SGRMALSVARDRTLRLWNLVEGRAAYIKRLPGAAELVRWSPAGDRFVVVI
TDALHIYDAATCAPVATCRHPVRVGGACFVPGGGNGGDGGGDCGDLVVTT
ADDNMLRAFAAATGEAIWEVSAADDAGGRVRALAFVPNAAAVVAAGVKGA
RTAEGGRDESTNGDGGGGGWIVTSSTAGVVRAWSVAGVGAATAVAAAAAT
DSKAAPAVCVLRRAVRGEPRFTSVAAFAGVIGGGGGITGSASGRRGKKRE
RKREEHGARAVAASAAEETANGAEKGGVKASKAAAQPVTGPANSAAAVPA
PKKRKAEAPQKAMMEAPAAQKAKAVVSVTQTAKAAAPVAQKNAAVPAAQN
KGAEASGKDPSVTDSKGAVKKGKGKRPREESDAAASLASPKPAKGAKGSD
GAPNGTPTAGRESTSGGDKAHQPKKVKKKNGGGGGTAGGAVAGNVTINIK
KQRQRTA*
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mRNA from alignment at P-wetherbeei_contig1359:2590..4759-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1359.2.2 ID=mRNA_P-wetherbeei_contig1359.2.2|Name=mRNA_P-wetherbeei_contig1359.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2170bp|location=Sequence derived from alignment at P-wetherbeei_contig1359:2590..4759- (Phaeothamnion wetherbeei SAG_119_79)
GTGGGTTATGAAGATCGTAGCAGGCAGCTACGAGGGCTTCTGCTACGGCT GGGATGCCGACATGAGCGGCGGGACCGCCGTCGCTTCCTCTTCTGGCGCG GCAGCAGCAGCTGGGGAAGAAAGAAAGCCTGCGGCGAGCCTGAGCTTTGG GACGCACGTCCACCAGGGCTGCGTCAAGGCGGTCGCGATGGCGACATCCG GAAAGCTCGCCGGCCGGTTGCTCGTGACAGGCGGCGCCGACGAGCGCATC CGGATTTTCGACCTCGACGCGCGCAGCGAAGTCGGCGAACTGCAGCACCA CAGCGGCACCATCAACTGCCTTGAGTTCGTCGGCTCCACGCACCTCCTCA GGTTTCCTACGGCGTCGGCTGACTGGGCTTGCGCCTTGTTTTGTTCCTTG CAGGCCCGGACCCCTTTTCCCGCATCGCTTCTGGCGTGCGACTGACTATC ATCGTCGCCCCGGGTCTTTCCCCTCCTCCTCATCACACACCGAACCGAGC AGCGGCAGCGACGATGGCACACTCTGCATCTGGCGCGTCTACGACTGGGC GCTCCTGCACATGCTCGGCGGCCACAAGGCAGCCGTCGCCGACCTATGCG CCCACCCCTCCGGCCGCATGGCGCTCTCCGTCGCGCGCGACCGGACGCTG CGCCTCTGGAACCTCGTCGAGGGACGCGCCGCCTATATCAAGCGGCTTCC GGGCGCGGCGGAGCTCGTTCGCTGGTGAGAGCGAGAGAAGGTGGCGGAAT ATTTTCGTCCTTTCTTTCTCTGAAAAGAAAATGAAACTTTGCATCGCGTA CCGCTTGTTGGCAGTTCAAACGTCTGACTGTTGTGATTGCCGTTAATGTT TCTAATAATGACAGGTCTCCGGCCGGCGACCGCTTCGTCGTGGTCATCAC GGACGCGCTCCACATCTACGACGCCGCCACCTGCGCCCCCGTGGCGACCT GCCGCCACCCGGTGCGCGTCGGCGGCGCCTGCTTCGTCCCTGGCGGCGGC AATGGCGGCGACGGTGGCGGCGACTGCGGCGACCTTGTAGTCACCACGGC TGATGACAACATGCTTCGGGCGTTCGCGGCGGCTACGGGAGAGGCGATCT GGGAGGTTTCGGCGGCCGACGACGCCGGCGGCCGTGTCCGTGCGCTAGCC TTCGTTCCCAACGCCGCCGCCGTCGTCGCTGCAGGCGTGAAAGGAGCGCG AACGGCCGAAGGCGGCAGAGATGAAAGCACTAATGGCGATGGCGGCGGTG GCGGCTGGATCGTCACTTCGTCGACGGCGGGGGTAGTTCGGGCGTGGTCT GTGGCTGGTGTTGGCGCCGCTACCGCAGTCGCCGCCGCTGCTGCCACGGA TTCAAAGGCGGCGCCGGCCGTATGCGTCTTGCGGCGGGCCGTCCGCGGCG AGCCGCGTTTCACATCCGTGGCGGCCTTTGCTGGTGTCATCGGCGGCGGC GGCGGCATCACCGGGTCCGCCAGCGGACGGCGCGGCAAGAAGCGGGAGCG AAAGCGGGAGGAGCACGGCGCGCGGGCGGTCGCCGCTAGCGCGGCAGAGG AAACAGCGAACGGAGCGGAAAAGGGAGGGGTGAAGGCCTCAAAGGCGGCT GCGCAGCCTGTAACAGGGCCTGCAAACAGTGCGGCGGCGGTGCCAGCCCC CAAAAAGAGGAAGGCGGAAGCGCCGCAAAAGGCGATGATGGAAGCGCCGG CGGCACAGAAGGCCAAGGCGGTGGTGTCGGTGACGCAAACGGCGAAAGCT GCAGCGCCGGTGGCGCAAAAGAATGCGGCGGTGCCGGCGGCGCAAAACAA GGGGGCAGAGGCGTCAGGAAAAGATCCCTCGGTAACAGACTCGAAGGGGG CGGTGAAGAAAGGCAAGGGAAAGCGGCCGCGAGAGGAAAGTGACGCGGCC GCATCCTTGGCGTCACCGAAGCCGGCCAAGGGCGCAAAAGGGTCCGATGG CGCACCAAACGGCACCCCGACGGCCGGACGGGAGAGCACCAGCGGCGGCG ACAAGGCGCATCAGCCCAAGAAGGTCAAAAAGAAGAACGGCGGTGGTGGA GGCACCGCGGGAGGAGCCGTCGCTGGAAATGTCACCATCAACATCAAAAA GCAGCGCCAACGTACCGCCTGACGAGTCAAGCAAGGGTTTGCTCTAAATA AATGACTCGATTCAATTCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1359:2590..4759-

>mRNA_P-wetherbeei_contig1359.2.2 ID=mRNA_P-wetherbeei_contig1359.2.2|Name=mRNA_P-wetherbeei_contig1359.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1824bp|location=Sequence derived from alignment at P-wetherbeei_contig1359:2590..4759- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGATCGTAGCAGGCAGCTACGAGGGCTTCTGCTACGGCTGGGATGC
CGACATGAGCGGCGGGACCGCCGTCGCTTCCTCTTCTGGCGCGGCAGCAG
CAGCTGGGGAAGAAAGAAAGCCTGCGGCGAGCCTGAGCTTTGGGACGCAC
GTCCACCAGGGCTGCGTCAAGGCGGTCGCGATGGCGACATCCGGAAAGCT
CGCCGGCCGGTTGCTCGTGACAGGCGGCGCCGACGAGCGCATCCGGATTT
TCGACCTCGACGCGCGCAGCGAAGTCGGCGAACTGCAGCACCACAGCGGC
ACCATCAACTGCCTTGAGTTCGTCGGCTCCACGCACCTCCTCAGCGGCAG
CGACGATGGCACACTCTGCATCTGGCGCGTCTACGACTGGGCGCTCCTGC
ACATGCTCGGCGGCCACAAGGCAGCCGTCGCCGACCTATGCGCCCACCCC
TCCGGCCGCATGGCGCTCTCCGTCGCGCGCGACCGGACGCTGCGCCTCTG
GAACCTCGTCGAGGGACGCGCCGCCTATATCAAGCGGCTTCCGGGCGCGG
CGGAGCTCGTTCGCTGGTCTCCGGCCGGCGACCGCTTCGTCGTGGTCATC
ACGGACGCGCTCCACATCTACGACGCCGCCACCTGCGCCCCCGTGGCGAC
CTGCCGCCACCCGGTGCGCGTCGGCGGCGCCTGCTTCGTCCCTGGCGGCG
GCAATGGCGGCGACGGTGGCGGCGACTGCGGCGACCTTGTAGTCACCACG
GCTGATGACAACATGCTTCGGGCGTTCGCGGCGGCTACGGGAGAGGCGAT
CTGGGAGGTTTCGGCGGCCGACGACGCCGGCGGCCGTGTCCGTGCGCTAG
CCTTCGTTCCCAACGCCGCCGCCGTCGTCGCTGCAGGCGTGAAAGGAGCG
CGAACGGCCGAAGGCGGCAGAGATGAAAGCACTAATGGCGATGGCGGCGG
TGGCGGCTGGATCGTCACTTCGTCGACGGCGGGGGTAGTTCGGGCGTGGT
CTGTGGCTGGTGTTGGCGCCGCTACCGCAGTCGCCGCCGCTGCTGCCACG
GATTCAAAGGCGGCGCCGGCCGTATGCGTCTTGCGGCGGGCCGTCCGCGG
CGAGCCGCGTTTCACATCCGTGGCGGCCTTTGCTGGTGTCATCGGCGGCG
GCGGCGGCATCACCGGGTCCGCCAGCGGACGGCGCGGCAAGAAGCGGGAG
CGAAAGCGGGAGGAGCACGGCGCGCGGGCGGTCGCCGCTAGCGCGGCAGA
GGAAACAGCGAACGGAGCGGAAAAGGGAGGGGTGAAGGCCTCAAAGGCGG
CTGCGCAGCCTGTAACAGGGCCTGCAAACAGTGCGGCGGCGGTGCCAGCC
CCCAAAAAGAGGAAGGCGGAAGCGCCGCAAAAGGCGATGATGGAAGCGCC
GGCGGCACAGAAGGCCAAGGCGGTGGTGTCGGTGACGCAAACGGCGAAAG
CTGCAGCGCCGGTGGCGCAAAAGAATGCGGCGGTGCCGGCGGCGCAAAAC
AAGGGGGCAGAGGCGTCAGGAAAAGATCCCTCGGTAACAGACTCGAAGGG
GGCGGTGAAGAAAGGCAAGGGAAAGCGGCCGCGAGAGGAAAGTGACGCGG
CCGCATCCTTGGCGTCACCGAAGCCGGCCAAGGGCGCAAAAGGGTCCGAT
GGCGCACCAAACGGCACCCCGACGGCCGGACGGGAGAGCACCAGCGGCGG
CGACAAGGCGCATCAGCCCAAGAAGGTCAAAAAGAAGAACGGCGGTGGTG
GAGGCACCGCGGGAGGAGCCGTCGCTGGAAATGTCACCATCAACATCAAA
AAGCAGCGCCAACGTACCGCCTGA
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