mRNA_P-wetherbeei_contig13575.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13575.1.1
Unique NamemRNA_P-wetherbeei_contig13575.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13575.1.1 vs. uniprot
Match: A0A2D8RV34_9HYPH (Ornithine decarboxylase n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2D8RV34_9HYPH)

HSP 1 Score: 385 bits (988), Expect = 3.550e-129
Identity = 193/371 (52.02%), Postives = 255/371 (68.73%), Query Frame = 1
Query:   10 PSFASVQDMLATLRPSYPVMCIWPERIAMTARRFLTGFPGKVLYAVKCNPHGIVLDAMHGAGIRDFDTASLNEIALVDERFDDANCYFNHPVKSRAAIDSAVRVYGVNDFVVDYPGELGKLIEVAGQGHIIQVRLRTPGGVATFDLSAKFGADEDMGVELLREVVAQKSRPAVSFHVGSQCRKASAYAKAFEIVARVLDRACVTPEYINVGGGFPVSDAEVKAPPLEEFFHQIRESAMQYGFLGKVPLLCEPGRGMVADAASLITQVHLRKDNQLYLNEGIFGSLSEIVYGDMRPTLQAIRLSGPLSNEMRPFTLFGPTCDSNDVVPHQFALPKDISEGDWIEVGGVGAYSNALQSSFNGFTTDTFVAIRG 1122
            PSF SV +++  L PSYPV C++P+ +   AR F+ GFPG VLYA KCNPH  VL A+H +GI  FDTAS++EIA V E+F DA+CYFNHPVK R A+++A  VYG+ D+VVD+P EL KL+ +AG    ++VR+ TP G A +DLSAKFGA  D  V LL++      R A++FHVGSQC    A+  A  +  +V D A V  EY++VGGGFP S  +  AP L+ +F  I ++  + G    VPL  EPGR +VA+  S++TQVHLRK + LY+N+GI+G LSEI  GD+ P ++A+R  GP+   +RPF LFGPTCDS DV+   F LP++I EGDWIE G +GAYS  +Q+ FNGF TDT V + G
Sbjct:    8 PSFPSVAEVIRRLEPSYPVFCVFPDILRERARTFVEGFPGTVLYATKCNPHPYVLRALHESGIDHFDTASISEIAKVTEQFPDAHCYFNHPVKGRGALEAAADVYGITDYVVDHPDELDKLVSIAGTDITVEVRIATPKGKAVYDLSAKFGASPDDAVALLKKAKDYGCRTAIAFHVGSQCLDPEAFRVAMGMAKKVADEAGVPLEYLDVGGGFPASYKQDVAP-LQTYFDVIADAKQKLGI--DVPLYGEPGRALVAEGCSVLTQVHLRKGDDLYINDGIYGCLSEIRDGDLDPPVRAVRKDGPVDGALRPFRLFGPTCDSLDVLKLPFYLPENIREGDWIEFGLMGAYSIGMQTGFNGFVTDTIVRVDG 375          
BLAST of mRNA_P-wetherbeei_contig13575.1.1 vs. uniprot
Match: A0A317EAU3_9PROT (Type III PLP-dependent enzyme n=1 Tax=Zavarzinia compransoris TaxID=1264899 RepID=A0A317EAU3_9PROT)

HSP 1 Score: 383 bits (983), Expect = 1.660e-128
Identity = 193/369 (52.30%), Postives = 252/369 (68.29%), Query Frame = 1
Query:   16 FASVQDMLATLRPSYPVMCIWPERIAMTARRFLTGFPGKVLYAVKCNPHGIVLDAMHGAGIRDFDTASLNEIALVDERFDDANCYFNHPVKSRAAIDSAVRVYGVNDFVVDYPGELGKLIEVAGQG-HIIQVRLRTPGGVATFDLSAKFGADEDMGVELLREVVAQKSRPAVSFHVGSQCRKASAYAKAFEIVARVLDRACVTPEYINVGGGFPVSDAEVKAPPLEEFFHQIRESAMQYGFLGKVPLLCEPGRGMVADAASLITQVHLRKDNQLYLNEGIFGSLSEIVYGDMRPTLQAIRLSG-PLSNEMRPFTLFGPTCDSNDVVPHQFALPKDISEGDWIEVGGVGAYSNALQSSFNGFTTDTFVAI 1116
            F+SV  ++  L PSYP++C+ P+R+A +A  FL GFPG+VLYAVKCNPH +VL+++  AGIR FDTASLNE+ALV E   +A CYFNHPVK  AAI++A  +YG+  +VVD   EL K+ E  G+   +IQVRL+T  G A FDLS KFGA +   VELLR+V  +   PA+SFHVGSQCR   AY++A      V+  A V   ++NVGGGFP      +  PL+ FF  IR++A +        L+CEPGR +V +  + I QVHLRK   LY+N+GI+G+LSE+  G + P ++ IR  G P+S +  PF +FGPTCDS DV+P  F LP D+++GDWIE+G VGAYSNAL S FNGF TDT V I
Sbjct:    6 FSSVDQVVEVLNPSYPILCVHPDRLARSAETFLKGFPGRVLYAVKCNPHPLVLNSLWRAGIRHFDTASLNEVALVQELLPEAECYFNHPVKGTAAIEAADHIYGIEAWVVDSVDELDKIEENVGKHPDVIQVRLQTASGYAAFDLSLKFGATKAETVELLRDVERRGYVPAISFHVGSQCRTPEAYSRAIHEAGEVMREAGVKLRFLNVGGGFPAHYRGTQIAPLDIFFKTIRDAAAKLDLPPDCELMCEPGRALVVEGCTQIVQVHLRKGGSLYVNDGIYGNLSELNIGKLTPPVRLIRRGGKPMSRDFAPFRIFGPTCDSLDVLPEPFVLPDDVTDGDWIEIGQVGAYSNALASHFNGFYTDTVVEI 374          
BLAST of mRNA_P-wetherbeei_contig13575.1.1 vs. uniprot
Match: UPI001F285FF8 (type III PLP-dependent enzyme n=1 Tax=Zavarzinia compransoris TaxID=1264899 RepID=UPI001F285FF8)

HSP 1 Score: 383 bits (983), Expect = 2.650e-128
Identity = 196/374 (52.41%), Postives = 250/374 (66.84%), Query Frame = 1
Query:    1 MTNPSFASVQDMLATLRPSYPVMCIWPERIAMTARRFLTGFPGKVLYAVKCNPHGIVLDAMHGAGIRDFDTASLNEIALVDERFDDANCYFNHPVKSRAAIDSAVRVYGVNDFVVDYPGELGKLIEVAGQG-HIIQVRLRTPGGVATFDLSAKFGADEDMGVELLREVVAQKSRPAVSFHVGSQCRKASAYAKAFEIVARVLDRACVTPEYINVGGGFPVSDAEVKAPPLEEFFHQIRESAMQYGFLGKVPLLCEPGRGMVADAASLITQVHLRKDNQLYLNEGIFGSLSEIVYGDMRPTLQAIRLSG-PLSNEMRPFTLFGPTCDSNDVVPHQFALPKDISEGDWIEVGGVGAYSNALQSSFNGFTTDTFVAI 1116
            M +  FASV  ++  L PSYPV+C+ P+R+A +A  FL GFPG+VLYAVKCNPH +VL  +  AGIR FDTASLNE+ALV E   DA CYFNHPVK  AAI++A  +YG+  +VVD   EL K+ E  G+   ++QVRL+T  G A FDLS KFG      VELLR+V  +   PAVSFHVGSQCR   AYA+A      V+  A V   ++NVGGGFP      +  PL+ FF  IRE+A +        L+CEPGR +V +  +L+ Q+HLRK   LY+N+G++G+LSE+  G + P ++ IR  G P+S E  PF +FGPTCDS DV+P  F LP D ++GDWIE+G VGAYSNA+ SSFNGF TD  V I
Sbjct:    1 MKSRRFASVDRVVEVLDPSYPVLCVHPDRLARSAETFLKGFPGRVLYAVKCNPHPVVLRNLWQAGIRHFDTASLNEVALVHELLPDAECYFNHPVKGTAAIEAADHIYGIEAWVVDTVDELDKIEETVGKHPDVVQVRLQTASGYAAFDLSLKFGCTPVEAVELLRDVQRRGFVPAVSFHVGSQCRTPEAYARAIAEAGAVIREAGVPIRFLNVGGGFPAHYRGTQIAPLDTFFKVIREAAAKLDLPPDCELMCEPGRALVVEGCTLLVQIHLRKGASLYINDGVYGNLSELNVGKLTPPVRLIRKGGKPMSREFAPFRIFGPTCDSIDVLPEPFVLPDDATDGDWIEIGQVGAYSNAVASSFNGFQTDAVVEI 374          
BLAST of mRNA_P-wetherbeei_contig13575.1.1 vs. uniprot
Match: A0A2E1Q761_9PROT (Ornithine decarboxylase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A2E1Q761_9PROT)

HSP 1 Score: 379 bits (974), Expect = 4.680e-127
Identity = 192/369 (52.03%), Postives = 254/369 (68.83%), Query Frame = 1
Query:   16 FASVQDMLATLRPSYPVMCIWPERIAMTARRFLTGFPGKVLYAVKCNPHGIVLDAMHGAGIRDFDTASLNEIALVDERFDDANCYFNHPVKSRAAIDSAVRVYGVNDFVVDYPGELGKLIEVAGQGHIIQVRLRTPGGVATFDLSAKFGADEDMGVELLREVVAQKSRPAVSFHVGSQCRKASAYAKAFEIVARVLDRACVTPEYINVGGGFPVSDAEVKAPPLEEFFHQIRESAMQYGFLGKVPLLCEPGRGMVADAASLITQVHLRKDNQLYLNEGIFGSLSEIVYGDMRPTLQAIRLSGPLSNEMRPFTLFGPTCDSNDVVPHQFALPKDISEGDWIEVGGVGAYSNALQSSFNGFTTDTFVAIRG 1122
            FASV D++  L PSYPV CI+P+ +   AR F+ GFPG VLYAVKCNPH  VL A++  GI  FDTAS++EIA V E+  +A+CYFNHPVK R A+++A  VYG+ D+VVD+P EL KL+ +AG    ++VR+ TP G A +DLSAKFGA  D   ELL+       R A++FHVGSQC   +A+  A E+  +V D+A V  EY++VGGGFP S  +   PPL+ +F  I ++  +      +PLL EPGR +VA+  S++TQVHLRK + LY+N+GI+G LSEI  GD+ P ++AIR  G +   +RPF +FGPTCDS DV+   F LP++I EGDWIE G +GAYS  +Q+ FNGF TDT V I G
Sbjct:   10 FASVGDVIRRLDPSYPVFCIFPDLLKERARTFVEGFPGTVLYAVKCNPHPYVLKALNEGGIEHFDTASISEIAKVTEQLPEAHCYFNHPVKGRGALEAAADVYGIKDYVVDHPDELEKLVAIAGTDITVEVRIATPKGKAVYDLSAKFGAAPDDAAELLKRAQGHGCRTALAFHVGSQCLDPAAFRVAMEMARKVADKAGVALEYLDVGGGFPASYKQ-DVPPLQSYFDTIADAKEK--LWAGMPLLGEPGRALVAEGCSVLTQVHLRKGDDLYINDGIYGCLSEIRDGDLDPPVRAIRKQGNVEGPLRPFRVFGPTCDSLDVLKLPFYLPENIREGDWIEFGLMGAYSIGMQTGFNGFITDTIVRIDG 375          
BLAST of mRNA_P-wetherbeei_contig13575.1.1 vs. uniprot
Match: A0A2D4VIS8_9HYPH (Ornithine decarboxylase n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VIS8_9HYPH)

HSP 1 Score: 379 bits (973), Expect = 9.590e-127
Identity = 201/375 (53.60%), Postives = 256/375 (68.27%), Query Frame = 1
Query:   16 FASVQDMLATLRPSYPVMCIWPERIAMTARRFLTGFPGKVLYAVKCNPHGIVLDAMHGAGIRDFDTASLNEIALVDERFDDANCYFNHPVKSRAAIDSAVRVYGVNDFVVDYPGELGKLIEVAGQGHIIQVRLRTPGGVATFDLSAKFGADEDMGVELLREVVAQKSRPAVSFHVGSQCRKASAYAKAFEIVARVLDRACVTPEYINVGGGFPVSDAEVKAPPLEEFFHQIRESAMQYGFLGKVPLLCEPGRGMVADAASLITQVHLRKDNQLYLNEGIFGSLSEIVYGDMRPTLQAIRLSG-----PLSNEMRPFTLFGPTCDSNDVVPHQFALPKDISEGDWIEVGGVGAYSNALQSSFNGFTTDTFVAIRGT 1125
            FASV D++  L PSYPV C++P+ +   AR F+ GFPG VLYAVKCNPH  VL A+   GI  FDTAS+ EIA V E+F DA+CYFNHPVK R A+DSAV VYG+ DFVVD   EL K+I+ AG    I+VRL TP G A ++LSAKFGA  D GV LL+E   +  R A++FHVGSQC    A+  A E+   V  +A V  EY++VGGGFP    ++  PPL+++F  +RE+  + G    VPL+ EPGR +VA+  S++TQVHLRK N LY+N+GI+G LSEI  GD+ P ++AIR        PL+  ++PF +FGPTCDS DV+   F LP +I EGDWIE G +GAYS  +Q+ FNGF TDT V I GT
Sbjct:   16 FASVDDVIDRLNPSYPVFCVFPDILRERARTFVEGFPGTVLYAVKCNPHHYVLRALSEGGIDHFDTASIFEIARVTEQFPDAHCYFNHPVKGRGALDSAVDVYGLKDFVVDDMHELDKVIQYAGTDVTIEVRLSTPKGRAVYNLSAKFGAPPDDGVALLKEANRRGCRTALAFHVGSQCLDPDAFRIAMELAMDVAGKAGVPLEYLDVGGGFPAR-YKMDVPPLQDYFDVVRETKDRLGIT--VPLMGEPGRALVANGCSVLTQVHLRKGNDLYINDGIYGCLSEIRDGDLDPPVRAIRRKKGGGGEPLAGHLQPFRIFGPTCDSLDVLKLPFHLPDNIQEGDWIEFGLMGAYSIGMQTGFNGFVTDTIVRIDGT 387          
BLAST of mRNA_P-wetherbeei_contig13575.1.1 vs. uniprot
Match: A0A317EGI6_9PROT (Uncharacterized protein n=2 Tax=Zavarzinia aquatilis TaxID=2211142 RepID=A0A317EGI6_9PROT)

HSP 1 Score: 381 bits (978), Expect = 1.420e-126
Identity = 191/369 (51.76%), Postives = 251/369 (68.02%), Query Frame = 1
Query:   16 FASVQDMLATLRPSYPVMCIWPERIAMTARRFLTGFPGKVLYAVKCNPHGIVLDAMHGAGIRDFDTASLNEIALVDERFDDANCYFNHPVKSRAAIDSAVRVYGVNDFVVDYPGELGKLIEVAGQ-GHIIQVRLRTPGGVATFDLSAKFGADEDMGVELLREVVAQKSRPAVSFHVGSQCRKASAYAKAFEIVARVLDRACVTPEYINVGGGFPVSDAEVKAPPLEEFFHQIRESAMQYGFLGKVPLLCEPGRGMVADAASLITQVHLRKDNQLYLNEGIFGSLSEIVYGDMRPTLQAIRLSG-PLSNEMRPFTLFGPTCDSNDVVPHQFALPKDISEGDWIEVGGVGAYSNALQSSFNGFTTDTFVAI 1116
            F SV  ++ TL PSYP++C+ P+R+A +A  FL GFPG+VLYAVKCNPH +V+ ++  AGIR FDTASLNEIALV E   +A CYFNHPVK  AAI++A R+Y +  +VVD   EL K+ E  G+   ++QVRL+T  G A FDLS KFGA  D  V LL++V A+   PA+SFHVGSQCR   A+++A      V+ RA V   ++NVGGGFP      + PPL+ FF  I+++  +        L+CEPGR +V +  +L+ QVHLRK   LY+N+GI+G+LSE+  G + P ++ IR    P S +  PF +FGPTCDS DV+P  F LP D+++GDWIE+G VGAYSNAL S FNGF TDT V I
Sbjct:   85 FTSVDQVIETLHPSYPILCVHPDRLARSANVFLKGFPGRVLYAVKCNPHPLVIQSLWRAGIRHFDTASLNEIALVKELLPEAECYFNHPVKGMAAIEAADRIYEMGAWVVDTVDELDKIEEEVGKFPDVVQVRLQTASGYAAFDLSLKFGATRDEAVALLQDVAARGYVPAISFHVGSQCRTPEAWSRAIHDAREVMQRAGVPIRFLNVGGGFPAHYRGTQIPPLDAFFAAIKQAVAKLDLPEGCELMCEPGRALVVEGCTLLVQVHLRKGASLYINDGIYGNLSELNIGKLTPPVRLIRRGDRPSSRDFAPFRIFGPTCDSLDVLPEPFVLPDDVTDGDWIEIGQVGAYSNALASPFNGFYTDTVVEI 453          
BLAST of mRNA_P-wetherbeei_contig13575.1.1 vs. uniprot
Match: A7HX69_PARL1 (Orn/DAP/Arg decarboxylase 2 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HX69_PARL1)

HSP 1 Score: 377 bits (969), Expect = 2.680e-126
Identity = 191/369 (51.76%), Postives = 251/369 (68.02%), Query Frame = 1
Query:   16 FASVQDMLATLRPSYPVMCIWPERIAMTARRFLTGFPGKVLYAVKCNPHGIVLDAMHGAGIRDFDTASLNEIALVDERFDDANCYFNHPVKSRAAIDSAVRVYGVNDFVVDYPGELGKLIEVAGQGHIIQVRLRTPGGVATFDLSAKFGADEDMGVELLREVVAQKSRPAVSFHVGSQCRKASAYAKAFEIVARVLDRACVTPEYINVGGGFPVSDAEVKAPPLEEFFHQIRESAMQYGFLGKVPLLCEPGRGMVADAASLITQVHLRKDNQLYLNEGIFGSLSEIVYGDMRPTLQAIRLSGPLSNEMRPFTLFGPTCDSNDVVPHQFALPKDISEGDWIEVGGVGAYSNALQSSFNGFTTDTFVAIRG 1122
            FASV D++  L PSYPV CI+P+ +   AR F+ GFPG VLYA KCNPH  VL A+  AGI  FDTAS++EIA V E   +A+CYFNHPVK R A+++A  VYG+ D+VVD+P EL K+I +AG    I+VR+ TP G   +DLSAKFGA  +  V LL+E   +  R A++FHVGSQC    A+  A E+  RV + A V  EY++VGGGFP    +   PPL+ +F  I  +  + G   +VPL  EPGR +VA+A S++TQVHLRK + LY+N+GI+G LSEI  GD+ P ++A+   G +  E+RPF +FGPTCDS DV+   F LP++I EGDW+E G +GAYS  +Q+ FNGF TDT V I G
Sbjct:   10 FASVTDVIQRLDPSYPVFCIFPDILKTRARSFVEGFPGTVLYATKCNPHPYVLKALSDAGIHHFDTASISEIAKVTELLPEAHCYFNHPVKGRGALEAAADVYGITDYVVDHPDELDKVISIAGTDITIEVRIATPKGKVVYDLSAKFGAAPEGAVTLLKEASRRGCRTAIAFHVGSQCLDPDAFRVAMEMAMRVAEEAGVKLEYLDVGGGFPAI-YKSNVPPLQTYFDTIAAARERLGI--EVPLFAEPGRALVAEACSVLTQVHLRKGDDLYINDGIYGCLSEIRDGDLDPPVRALTKDGKVEGELRPFRIFGPTCDSLDVLKLPFYLPENIREGDWVEFGLMGAYSIGMQTGFNGFITDTIVRIDG 375          
BLAST of mRNA_P-wetherbeei_contig13575.1.1 vs. uniprot
Match: A0A2N3E1C8_9PROT (Type III PLP-dependent enzyme n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3E1C8_9PROT)

HSP 1 Score: 375 bits (963), Expect = 2.100e-125
Identity = 191/369 (51.76%), Postives = 251/369 (68.02%), Query Frame = 1
Query:   16 FASVQDMLATLRPSYPVMCIWPERIAMTARRFLTGFPGKVLYAVKCNPHGIVLDAMHGAGIRDFDTASLNEIALVDERFDDANCYFNHPVKSRAAIDSAVRVYGVNDFVVDYPGELGKLIEVAGQGHIIQVRLRTPGGVATFDLSAKFGADEDMGVELLREVVAQKSRPAVSFHVGSQCRKASAYAKAFEIVARVLDRACVTPEYINVGGGFPVSDAEVKAPPLEEFFHQIRESAMQYGFLGKVPLLCEPGRGMVADAASLITQVHLRKDNQLYLNEGIFGSLSEIVYGDMRPTLQAIRLSGPLSNEMRPFTLFGPTCDSNDVVPHQFALPKDISEGDWIEVGGVGAYSNALQSSFNGFTTDTFVAIRG 1122
            F+SV D++  L PSYPV C++P+ +   A+ F+ GFPG VLYA KCNPH  VL+A+   GI  FDTAS++EIA+V E    A+CYFNHPVK R A+++A  VYG+ D+VVD   EL K+I +AG    I+VR+ TP G A +DLSAKFGA  +  V LL+E  A+  R A++FHVGSQC    A+  A E+  +V+  A    EY++VGGGFP    +   PPL+++F  I  S    G   +VPLL EPGR +VAD  +L+TQVHLRK + LY+N+GI+G LSEI  GD+ P ++AI   GP++ + RPF +FGPTCDS DV+   F LP+DI EGDWIE G +GAYS  +Q+ FNGF TDT V I G
Sbjct:    9 FSSVADVIERLNPSYPVFCVFPDILKARAQGFIEGFPGTVLYATKCNPHPFVLNALVEGGILHFDTASISEIAMVTEMIPGAHCYFNHPVKGRGALEAAADVYGITDYVVDDMHELEKVIGIAGTDITIEVRIATPKGKAVYDLSAKFGARPEAAVALLKEAQARGCRTALAFHVGSQCLDPDAFRVAMEMAMKVVGEAGTPLEYLDVGGGFPAL-YKANVPPLQDYFDVIGNSRKALGI--EVPLLAEPGRALVADGCTLLTQVHLRKGDDLYINDGIYGCLSEIRDGDLDPPVRAISRDGPVTGKSRPFRIFGPTCDSLDVLKLPFHLPEDIEEGDWIEFGLMGAYSIGMQTGFNGFITDTIVRIDG 374          
BLAST of mRNA_P-wetherbeei_contig13575.1.1 vs. uniprot
Match: A0A2N3E8S1_9PROT (Type III PLP-dependent enzyme n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3E8S1_9PROT)

HSP 1 Score: 375 bits (962), Expect = 3.070e-125
Identity = 194/369 (52.57%), Postives = 252/369 (68.29%), Query Frame = 1
Query:   16 FASVQDMLATLRPSYPVMCIWPERIAMTARRFLTGFPGKVLYAVKCNPHGIVLDAMHGAGIRDFDTASLNEIALVDERFDDANCYFNHPVKSRAAIDSAVRVYGVNDFVVDYPGELGKLIEVAGQGHIIQVRLRTPGGVATFDLSAKFGADEDMGVELLREVVAQKSRPAVSFHVGSQCRKASAYAKAFEIVARVLDRACVTPEYINVGGGFPVSDAEVKAPPLEEFFHQIRESAMQYGFLGKVPLLCEPGRGMVADAASLITQVHLRKDNQLYLNEGIFGSLSEIVYGDMRPTLQAIRLSGPLSNEMRPFTLFGPTCDSNDVVPHQFALPKDISEGDWIEVGGVGAYSNALQSSFNGFTTDTFVAIRG 1122
            FASV D++A L PSYPV C++P+ +   AR F+ GFPG VLYAVKCNPH  VL A+   GIR FDTAS++EIA V+E+  +A+CYFNHPVK R A+++A  VYG+ D+VVD   ELGK+I +AG    I+VR+ TP   A +DLS+KFGA  D  V LLRE   +  R A++FHVGSQC    AY  A E+ A V  RA V  EY+++GGGFP     V    L+ +F  I  +  + G LG +PL  EPGR +VA+  S++TQVHLRK + LY+N+GI+G LSEI  GD  P ++A   +GP++  +RPF +FGPTCDS DV+  +F LP+ I EGDWIE G +GAYS  +Q+ FNGF TDT V I G
Sbjct:   10 FASVADVIARLNPSYPVFCVFPDVLRARARAFVEGFPGTVLYAVKCNPHPFVLKALWEGGIRHFDTASISEIAKVNEQLPEAHCYFNHPVKGRGALEAAADVYGLRDYVVDTLSELGKVIGIAGTDITIEVRIATPKSKAVYDLSSKFGATPDEAVALLREASRRGCRTAIAFHVGSQCLDPDAYRVAMEMSADVAARAGVKLEYLDIGGGFPAIHG-VDVASLQGYFDVIATTNERLG-LG-IPLFAEPGRALVAEGGSVLTQVHLRKGDSLYINDGIYGCLSEIRDGDFDPPVRANSKAGPIAGPLRPFRIFGPTCDSLDVLKQKFDLPESIGEGDWIEFGLMGAYSIGMQTGFNGFVTDTIVRIDG 375          
BLAST of mRNA_P-wetherbeei_contig13575.1.1 vs. uniprot
Match: A0A0F3ISU0_9PROT (Uncharacterized protein n=3 Tax=Elstera TaxID=1091044 RepID=A0A0F3ISU0_9PROT)

HSP 1 Score: 370 bits (949), Expect = 3.730e-123
Identity = 190/372 (51.08%), Postives = 243/372 (65.32%), Query Frame = 1
Query:    4 TNPSFASVQDMLATLRPSYPVMCIWPERIAMTARRFLTGFPGKVLYAVKCNPHGIVLDAMHGAGIRDFDTASLNEIALVDERFDDANCYFNHPVKSRAAIDSAVRVYGVNDFVVDYPGELGKLIEVAGQ-GHIIQVRLRTPGGVATFDLSAKFGADEDMGVELLREVVAQKSRPAVSFHVGSQCRKASAYAKAFEIVARVLDRACVTPEYINVGGGFPVSDAEVKAPPLEEFFHQIRESAMQYGFLGKVPLLCEPGRGMVADAASLITQVHLRKDNQLYLNEGIFGSLSEIVYGDMRPTLQAIRLSGPLSNEMRPFTLFGPTCDSNDVVPHQFALPKDISEGDWIEVGGVGAYSNALQSSFNGFTTDTFVAI 1116
            T P +A+ + M+A L+P +PV C+ P  +   AR FL  F G+VLYA KCNPH ++L A++  GIR FDTASLNE+A V E F DA CYF HPVKSR+AI  A  VY V  FV+D   EL K+++ A + G  I VRL TP   A +DLSAKFG      VELL+E+ A+  R  + FHVGSQC    A+  A +IV  VLD A V   Y++VGGGFP S    + PPL EFF +I     +        L+CEPGR +VAD  SL+TQ+HLRK +QLY+N+GI+GSLSE V   +R  ++ IRL+G  S EM  +T++GPTCDS DV+P    LP D+ EGDWIE G +GAYSNAL + FNGF  D +V +
Sbjct:    9 TQPRYANAEAMVAALKPGHPVYCVRPHVVKRAARDFLDAFDGRVLYATKCNPHPLILRALYEEGIRHFDTASLNEVAQVRELFRDAECYFMHPVKSRSAIRIADEVYNVEHFVIDTRDELHKVLDEAREEGLAIIVRLATPSAGAAYDLSAKFGTKPAEAVELLQEIKAEGYRAGIGFHVGSQCANPRAFRTALKIVGEVLDAAKVDIAYLDVGGGFPTSYQGAQVPPLSEFFAEIEAGLREIKLRRDCVLMCEPGRALVADGMSLVTQIHLRKGDQLYINDGIYGSLSETVTARLRFPVRPIRLTGGFSEEMIEYTIYGPTCDSTDVLPVSIRLPADMKEGDWIEFGRIGAYSNALATRFNGFFPDAYVVV 380          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13575.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8RV34_9HYPH3.550e-12952.02Ornithine decarboxylase n=1 Tax=Parvibaculum sp. T... [more]
A0A317EAU3_9PROT1.660e-12852.30Type III PLP-dependent enzyme n=1 Tax=Zavarzinia c... [more]
UPI001F285FF82.650e-12852.41type III PLP-dependent enzyme n=1 Tax=Zavarzinia c... [more]
A0A2E1Q761_9PROT4.680e-12752.03Ornithine decarboxylase n=3 Tax=Proteobacteria Tax... [more]
A0A2D4VIS8_9HYPH9.590e-12753.60Ornithine decarboxylase n=2 Tax=Parvibaculum TaxID... [more]
A0A317EGI6_9PROT1.420e-12651.76Uncharacterized protein n=2 Tax=Zavarzinia aquatil... [more]
A7HX69_PARL12.680e-12651.76Orn/DAP/Arg decarboxylase 2 n=1 Tax=Parvibaculum l... [more]
A0A2N3E1C8_9PROT2.100e-12551.76Type III PLP-dependent enzyme n=1 Tax=Alphaproteob... [more]
A0A2N3E8S1_9PROT3.070e-12552.57Type III PLP-dependent enzyme n=1 Tax=Alphaproteob... [more]
A0A0F3ISU0_9PROT3.730e-12351.08Uncharacterized protein n=3 Tax=Elstera TaxID=1091... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13575contigP-wetherbeei_contig13575:72..1220 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog402881.Plav_2895
Preferred nameldc
PFAMsOrn_Arg_deC_N,Orn_DAP_Arg_deC
Model size1149
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00299
KEGG koko:K01581
KEGG ReactionR00670
KEGG Pathwayko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130
KEGG ModuleM00134
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.39e-127
EggNOG OGsCOG0019@1|root,COG0019@2|Bacteria,1MZ7Y@1224|Proteobacteria,2TSKB@28211|Alphaproteobacteria,1JN0I@119043|Rhodobiaceae
EC4.1.1.17
DescriptionPyridoxal-dependent decarboxylase, pyridoxal binding domain
Cds size1149
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185990.9945204-CDS-P-wetherbeei_contig13575:71..12201683185990.9945204-CDS-P-wetherbeei_contig13575:71..1220Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13575 72..1220 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13575.1.1prot_P-wetherbeei_contig13575.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13575 72..1220 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13575.1.1

>prot_P-wetherbeei_contig13575.1.1 ID=prot_P-wetherbeei_contig13575.1.1|Name=mRNA_P-wetherbeei_contig13575.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=383bp
MTNPSFASVQDMLATLRPSYPVMCIWPERIAMTARRFLTGFPGKVLYAVK
CNPHGIVLDAMHGAGIRDFDTASLNEIALVDERFDDANCYFNHPVKSRAA
IDSAVRVYGVNDFVVDYPGELGKLIEVAGQGHIIQVRLRTPGGVATFDLS
AKFGADEDMGVELLREVVAQKSRPAVSFHVGSQCRKASAYAKAFEIVARV
LDRACVTPEYINVGGGFPVSDAEVKAPPLEEFFHQIRESAMQYGFLGKVP
LLCEPGRGMVADAASLITQVHLRKDNQLYLNEGIFGSLSEIVYGDMRPTL
QAIRLSGPLSNEMRPFTLFGPTCDSNDVVPHQFALPKDISEGDWIEVGGV
GAYSNALQSSFNGFTTDTFVAIRGTTPSALAA*
back to top

mRNA from alignment at P-wetherbeei_contig13575:72..1220-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13575.1.1 ID=mRNA_P-wetherbeei_contig13575.1.1|Name=mRNA_P-wetherbeei_contig13575.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1149bp|location=Sequence derived from alignment at P-wetherbeei_contig13575:72..1220- (Phaeothamnion wetherbeei SAG_119_79)
ATGACCAATCCCAGCTTTGCTTCGGTTCAGGATATGCTGGCCACCTTGCG GCCATCCTATCCGGTTATGTGCATCTGGCCGGAGCGCATTGCGATGACGG CGCGCCGTTTTCTGACTGGTTTTCCTGGCAAGGTTCTGTATGCGGTGAAA TGCAACCCGCATGGCATTGTGCTGGACGCCATGCACGGCGCAGGCATCCG TGACTTTGACACGGCCTCCCTCAACGAAATTGCGCTGGTCGATGAGCGTT TCGATGATGCGAACTGCTATTTTAACCATCCCGTAAAAAGCCGCGCCGCC ATAGATTCAGCAGTCCGTGTATATGGCGTGAACGATTTCGTGGTGGATTA TCCAGGCGAGCTTGGCAAGCTTATAGAGGTCGCCGGGCAGGGCCATATCA TTCAGGTGCGTCTGCGTACGCCGGGCGGTGTTGCTACATTTGACCTGTCG GCAAAGTTCGGTGCGGATGAAGATATGGGGGTGGAGCTTCTGCGTGAGGT TGTGGCGCAAAAATCCAGACCTGCGGTTTCGTTTCACGTCGGCAGCCAGT GCCGCAAGGCGTCTGCCTATGCCAAGGCGTTTGAAATTGTCGCTCGTGTG CTGGACCGCGCCTGTGTAACACCGGAATATATCAATGTCGGTGGCGGCTT TCCGGTTTCCGACGCCGAGGTCAAAGCCCCGCCCCTTGAAGAATTCTTTC ATCAGATTCGTGAATCAGCCATGCAATATGGGTTCCTGGGAAAAGTGCCT TTGCTGTGTGAGCCCGGGCGCGGGATGGTCGCCGATGCCGCATCGCTGAT TACACAGGTTCATCTGCGCAAGGACAATCAGCTATATCTGAACGAAGGTA TTTTCGGCAGCCTGTCCGAAATAGTTTATGGCGACATGCGGCCAACCCTA CAGGCGATCCGGTTAAGCGGGCCACTATCGAATGAGATGCGTCCTTTTAC TTTGTTTGGGCCAACCTGCGATTCAAACGATGTCGTGCCGCACCAATTTG CCCTGCCAAAGGATATTTCCGAAGGCGACTGGATTGAAGTGGGCGGCGTC GGCGCCTATTCCAATGCGCTGCAAAGCAGCTTTAACGGTTTCACCACCGA TACGTTCGTCGCCATTCGCGGCACAACGCCAAGCGCACTGGCGGCATAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig13575:72..1220-

>mRNA_P-wetherbeei_contig13575.1.1 ID=mRNA_P-wetherbeei_contig13575.1.1|Name=mRNA_P-wetherbeei_contig13575.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1149bp|location=Sequence derived from alignment at P-wetherbeei_contig13575:72..1220- (Phaeothamnion wetherbeei SAG_119_79)
ATGACCAATCCCAGCTTTGCTTCGGTTCAGGATATGCTGGCCACCTTGCG
GCCATCCTATCCGGTTATGTGCATCTGGCCGGAGCGCATTGCGATGACGG
CGCGCCGTTTTCTGACTGGTTTTCCTGGCAAGGTTCTGTATGCGGTGAAA
TGCAACCCGCATGGCATTGTGCTGGACGCCATGCACGGCGCAGGCATCCG
TGACTTTGACACGGCCTCCCTCAACGAAATTGCGCTGGTCGATGAGCGTT
TCGATGATGCGAACTGCTATTTTAACCATCCCGTAAAAAGCCGCGCCGCC
ATAGATTCAGCAGTCCGTGTATATGGCGTGAACGATTTCGTGGTGGATTA
TCCAGGCGAGCTTGGCAAGCTTATAGAGGTCGCCGGGCAGGGCCATATCA
TTCAGGTGCGTCTGCGTACGCCGGGCGGTGTTGCTACATTTGACCTGTCG
GCAAAGTTCGGTGCGGATGAAGATATGGGGGTGGAGCTTCTGCGTGAGGT
TGTGGCGCAAAAATCCAGACCTGCGGTTTCGTTTCACGTCGGCAGCCAGT
GCCGCAAGGCGTCTGCCTATGCCAAGGCGTTTGAAATTGTCGCTCGTGTG
CTGGACCGCGCCTGTGTAACACCGGAATATATCAATGTCGGTGGCGGCTT
TCCGGTTTCCGACGCCGAGGTCAAAGCCCCGCCCCTTGAAGAATTCTTTC
ATCAGATTCGTGAATCAGCCATGCAATATGGGTTCCTGGGAAAAGTGCCT
TTGCTGTGTGAGCCCGGGCGCGGGATGGTCGCCGATGCCGCATCGCTGAT
TACACAGGTTCATCTGCGCAAGGACAATCAGCTATATCTGAACGAAGGTA
TTTTCGGCAGCCTGTCCGAAATAGTTTATGGCGACATGCGGCCAACCCTA
CAGGCGATCCGGTTAAGCGGGCCACTATCGAATGAGATGCGTCCTTTTAC
TTTGTTTGGGCCAACCTGCGATTCAAACGATGTCGTGCCGCACCAATTTG
CCCTGCCAAAGGATATTTCCGAAGGCGACTGGATTGAAGTGGGCGGCGTC
GGCGCCTATTCCAATGCGCTGCAAAGCAGCTTTAACGGTTTCACCACCGA
TACGTTCGTCGCCATTCGCGGCACAACGCCAAGCGCACTGGCGGCATAG
back to top