mRNA_P-wetherbeei_contig13566.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13566.1.1
Unique NamemRNA_P-wetherbeei_contig13566.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13566.1.1 vs. uniprot
Match: A0A6H5KUT1_9PHAE (Aldo_ket_red domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUT1_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 8.570e-41
Identity = 81/151 (53.64%), Postives = 96/151 (63.58%), Query Frame = 1
Query:    4 GNNKTSPTDWMAAWRTLERLYREDSAICAIGVSNFEAWRLRELLDLAEEAPHVVQNWMDPFHQDRSTREVCAENGIHYTAYSLLGSQWAYRTLPDRSRLPPGSNPVLSDPAVAGIAAAQGVSAAAVVLSWALQRGVSVLPRSGDLAHIREN 456
            G+   +P  W  AWR LE +Y +  A+ AIGVSNF    LRELL +A  AP  VQNWMDPFHQDR  R +CAE+GI Y AYS LG QWA+R  P  S  P   NPV +DP +  IA+A G S   V LSWALQ G  +LPRS +L  I+ N
Sbjct:  180 GSCPVNPAPWQDAWRQLEDMYSK-GAVRAIGVSNFSESLLRELLGMATVAPAAVQNWMDPFHQDREVRALCAEHGIAYIAYSTLGGQWAHR--PSSSMSP---NPVSTDPTLIAIASAHGTSVQTVALSWALQSGAIILPRSSNLDRIKGN 324          
BLAST of mRNA_P-wetherbeei_contig13566.1.1 vs. uniprot
Match: A0A7S2SM38_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SM38_9STRA)

HSP 1 Score: 124 bits (312), Expect = 6.940e-32
Identity = 66/142 (46.48%), Postives = 85/142 (59.86%), Query Frame = 1
Query:   31 WMAAWRTLERLYREDSAICAIGVSNFEAWRLRELLDLAEEAPHVVQNWMDPFHQDRSTREVCAENGIHYTAYSLLGSQWAYRTLPDRSRLPPGSNPVLSDPAVAGIAAAQGVSAAAVVLSWALQRGVSVLPRSGDLAHIREN 456
            W  +WR LE  Y +   I AIGVSNFE  +++ELL+ A   PH+VQNWMDPF+QD   R +C EN + YT+YS LG QW +           G N V + P +  IA     S   +VL WALQ+GV V+PRS  L +IR+N
Sbjct:  156 WKDSWRVLEDYYNK-GIIKAIGVSNFEYDQMQELLEFANVKPHMVQNWMDPFNQDTDVRRLCDENDVLYTSYSTLGGQWEHIK---------GENLVKTSPTIQKIAKKYNTSVQQLVLKWALQKGVIVIPRSSTLKNIRKN 287          
BLAST of mRNA_P-wetherbeei_contig13566.1.1 vs. uniprot
Match: A0A7R9U0E2_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9U0E2_9VIRI)

HSP 1 Score: 123 bits (309), Expect = 2.450e-31
Identity = 71/150 (47.33%), Postives = 88/150 (58.67%), Query Frame = 1
Query:    4 GNNKTSPTDWMAAWRTLERLYREDSAICAIGVSNFEAWRLRELLDLAEEAPHVVQNWMDPFHQDRSTREVCAENGIHYTAYSLLGSQWAYRTLPDRSRLPPGSNPVLSDPAVAGIAAAQG-VSAAAVVLSWALQRGVSVLPRSGDLAHIR 450
            G +      W  +WR LE  Y +   + AIGVSNF    L EL + A E PHVVQNW DP HQDRSTR      G  Y AYS+LG+Q  ++          GSNPVL+ P +  I  A G V AA V L+WALQRG++V+PRS + AH+R
Sbjct:  162 GRDHVEQGTWRDSWRALEEAYAQGK-LRAIGVSNFWPSDLEELGNFAREGPHVVQNWADPLHQDRSTRAATERIGAVYQAYSVLGTQHIHKR---------GSNPVLAHPTLVRIGKAHGDVGAAEVTLAWALQRGMAVIPRSTNPAHMR 301          
BLAST of mRNA_P-wetherbeei_contig13566.1.1 vs. uniprot
Match: A0A7S2UWQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWQ9_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.640e-31
Identity = 69/146 (47.26%), Postives = 83/146 (56.85%), Query Frame = 1
Query:   31 WMAAWRTLERLYREDSAICAIGVSNFEAWRLRELLDLAE----EAPHVVQNWMDPFHQDRSTREVCAENGIHYTAYSLLGSQWAYRTLPDRSRLPPGSNPVLSDPAVAGIAAAQGVSAAAVVLSWALQRGVSVLPRSGDLAHIREN 456
            W  AW  L+  Y     + AIGVSNF   +LREL  +        PHVVQNWMDP+HQDR+ R  C ENG+ YTAYS  G+QW Y  +          N  L+DP +  IA    V  A VVLSWALQ G+SV+PRS    +IR N
Sbjct:  138 WKDAWEVLQEWYLAGK-VRAIGVSNFNTAQLRELWVMGGLPGGVRPHVVQNWMDPYHQDRAVRRWCKENGVLYTAYSQFGAQWQYMGVGVEG------NVALADPVIVEIAEKHQVHPAMVVLSWALQEGISVIPRSSKQENIRAN 276          
BLAST of mRNA_P-wetherbeei_contig13566.1.1 vs. uniprot
Match: A0A7S2DDL7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDL7_9STRA)

HSP 1 Score: 120 bits (301), Expect = 4.800e-31
Identity = 65/127 (51.18%), Postives = 80/127 (62.99%), Query Frame = 1
Query:   88 AIGVSNFEAWRLRELLDLAEEAPHVVQNWMDPFHQDRSTREVCAENGIHYTAYSLLGSQWAYRTLPDRSRLPPGSNPVLSDPAVAGIAAAQ----GVSAAAVVLSWALQRGVSVLPRSGDLAHIREN 456
            A+GVSN + W    +L+  +  PHVVQNW DPFHQDR  R+ CA  G+ YT+YS LG QW +R L         SNPVL+ P +  IA+A     G+S   VVLSWALQR V+VLPRS D  H+R N
Sbjct:   14 AVGVSNADLW----VLETMDPPPHVVQNWFDPFHQDRQVRDWCASRGVAYTSYSTLGGQWEHRPLQGGGGR--RSNPVLTSPVLRDIASAHADIPGMSVPLVVLSWALQRNVAVLPRSTDEDHLRAN 134          
BLAST of mRNA_P-wetherbeei_contig13566.1.1 vs. uniprot
Match: T0RA73_SAPDV (Aldo_ket_red domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RA73_SAPDV)

HSP 1 Score: 122 bits (306), Expect = 7.050e-31
Identity = 68/143 (47.55%), Postives = 85/143 (59.44%), Query Frame = 1
Query:   28 DWMAAWRTLERLYREDSAICAIGVSNFEAWRLRELLDLAEEAPHVVQNWMDPFHQDRSTREVCAENGIHYTAYSLLGSQWAYRTLPDRSRLPPGSNPVLSDPAVAGIAAAQGVSAAAVVLSWALQRGVSVLPRSGDLAHIREN 456
            DW  AWR LERLY +D  I A+G SNF+A +L EL  +A   PHVVQ W+DPFHQ R  R     +G     YS LG+QW              +NPV S P +  IAA    S A+VVLS+ LQRGV+++PRS  LAH++ N
Sbjct:  163 DWRPAWRALERLY-DDGKIRALGASNFDATQLHELWVMATTPPHVVQMWVDPFHQARGDRAFVIGHGGVVVGYSSLGTQWP-------------TNPVWSSPVLQAIAAKHATSVASVVLSYFLQRGVAMIPRSTKLAHVQAN 291          
BLAST of mRNA_P-wetherbeei_contig13566.1.1 vs. uniprot
Match: A0A836CIZ5_9STRA (Aldo/Keto reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ5_9STRA)

HSP 1 Score: 120 bits (301), Expect = 4.540e-30
Identity = 69/149 (46.31%), Postives = 84/149 (56.38%), Query Frame = 1
Query:   22 PTDWMAAWRTLERLYREDSAICAIGVSNFEAWRLRELLDLAEEA----PHVVQNWMDPFHQDRSTREVCAENGIHYTAYSLLGSQWAYRTLPDRSRLPPGSNPVLSDPAVAGIAAAQGVSAAAVVLSWALQRGVSVLPRSGDLAHIREN 456
            P  W  AW  L  L  E   I ++GVSNF    LR L+  A+      P VVQNW DP H+D   R +CA + I Y +YS LG+Q   R          G NPVL++P +  IAA QG S A VVLSWALQ GV VLPR+G  AH+ +N
Sbjct:  170 PGTWQEAWAALGALQAEGK-IRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQHPGR----------GGNPVLTNPVIKAIAARQGTSPARVVLSWALQSGVGVLPRAGRAAHVEDN 307          
BLAST of mRNA_P-wetherbeei_contig13566.1.1 vs. uniprot
Match: A0A7S3JU92_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU92_9STRA)

HSP 1 Score: 121 bits (303), Expect = 7.210e-30
Identity = 66/143 (46.15%), Postives = 82/143 (57.34%), Query Frame = 1
Query:   31 WMAAWRTLERLYREDSAICAIGVSNFEAWRLRELLDLAEEAPHVVQNWMDPFHQDRSTREVCAENGIHYTAYSLLGSQWAYRTLPDRSRLPPGSNPVLSDPAVAGIAAA-QGVSAAAVVLSWALQRGVSVLPRSGDLAHIREN 456
            W  +WR +E  YR+   + AIG+SNF    LR L D A   PH+VQNWMDPFHQD + R  C +N I Y +YS LG+QW              +NPV + P +A IAA     +   V L+WALQRGV VLPRS    HI+ N
Sbjct:  144 WRDSWRAMETAYRQ-GLVRAIGISNFNLDELRHLQDFAAIKPHLVQNWMDPFHQDSAVRAFCQQNSIVYMSYSTLGTQWRQ-----------SANPVATSPVLAQIAATFDHATVQTVTLAWALQRGVVVLPRSFKSHHIKAN 274          
BLAST of mRNA_P-wetherbeei_contig13566.1.1 vs. uniprot
Match: A0A7S4B0V3_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B0V3_CHRCT)

HSP 1 Score: 119 bits (297), Expect = 1.230e-29
Identity = 65/142 (45.77%), Postives = 85/142 (59.86%), Query Frame = 1
Query:   31 WMAAWRTLERLYREDSAICAIGVSNFEAWRLRELLDLAEEAPHVVQNWMDPFHQDRSTREVCAENGIHYTAYSLLGSQWAYRTLPDRSRLPPGSNPVLSDPAVAGIAAAQGVSAAAVVLSWALQRGVSVLPRSGDLAHIREN 456
            W  +WR LE LY +   + AIGV NF    L EL+  A   PH+VQ+WMDP HQ+R  R++CA++G+ + AYS LG+Q        R+R+    NPVL  P +A I+   G S A +VL WALQ  VSV+PRS    HI  N
Sbjct:  111 WRESWRALETLY-DRGLVRAIGVCNFSPAELNELIGFARIKPHLVQSWMDPLHQERPLRKMCAQHGVRFQAYSSLGTQ-------HRTRI----NPVLHHPVLARISHELGRSVAQIVLRWALQHNVSVIPRSTKRKHIESN 240          
BLAST of mRNA_P-wetherbeei_contig13566.1.1 vs. uniprot
Match: A0A4D9D7R8_9STRA (Aldo_ket_red domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7R8_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.040e-29
Identity = 67/138 (48.55%), Postives = 79/138 (57.25%), Query Frame = 1
Query:   40 AWRTLERLYREDSAICAIGVSNFEAWRLRELLDLAEEAPHVVQNWMDPFHQDRSTREVCAENGIHYTAYSLLGSQWAYRTLPDRSRLPPGSNPVLSDPAVAGIAAAQGVSAAAVVLSWALQRGVSVLPRSGDLAHIRE 453
            AWR LE LY +   + AIGVSNF   +L  L   A    HVVQN MDPF QDR  R  C   G+ YT YS LG+QW         R P G NPVL+ P +  +A   GVS A +VL WA Q GV+V+PRS +  HI E
Sbjct:  160 AWRALESLYHKGQ-VKAIGVSNFNVEQLEALSSTAVVPIHVVQNHMDPFKQDREVRAWCQARGVLYTGYSTLGTQW---------RPPGGQNPVLNHPVIQTLAQRHGVSPALLVLVWARQEGVAVIPRSSEAKHIDE 287          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13566.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUT1_9PHAE8.570e-4153.64Aldo_ket_red domain-containing protein n=2 Tax=Ect... [more]
A0A7S2SM38_9STRA6.940e-3246.48Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7R9U0E2_9VIRI2.450e-3147.33Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S2UWQ9_9STRA4.640e-3147.26Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2DDL7_9STRA4.800e-3151.18Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
T0RA73_SAPDV7.050e-3147.55Aldo_ket_red domain-containing protein n=1 Tax=Sap... [more]
A0A836CIZ5_9STRA4.540e-3046.31Aldo/Keto reductase n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S3JU92_9STRA7.210e-3046.15Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S4B0V3_CHRCT1.230e-2945.77Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A4D9D7R8_9STRA4.040e-2948.55Aldo_ket_red domain-containing protein n=2 Tax=Mon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13566contigP-wetherbeei_contig13566:67..713 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LDN7
PFAMsAldo_ket_red
Model size456
Max annot lvl2759|Eukaryota
KEGG rclassRC00087,RC00088,RC00099,RC00108,RC00133,RC00205,RC00670
KEGG koko:K00002,ko:K00011
KEGG ReactionR00746,R01036,R01041,R01093,R01095,R01431,R01481,R01758,R01759,R01787,R02531,R02577,R04285,R05231,R11764
KEGG Pathwayko00010,ko00040,ko00051,ko00052,ko00561,ko00790,ko00930,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00040,map00051,map00052,map00561,map00790,map00930,map01100,map01110,map01120,map01130,map01220
KEGG ModuleM00014
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.4e-41
EggNOG OGsCOG0656@1|root,KOG1577@2759|Eukaryota
Ec32 ortholog descriptionNADP-dependent oxidoreductase domain
Ec32 orthologEc-19_001360.1
EC1.1.1.2,1.1.1.21
Descriptionoxidoreductase activity
Cds size456
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185990.6661077-CDS-P-wetherbeei_contig13566:66..2131683185990.6661077-CDS-P-wetherbeei_contig13566:66..213Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13566 67..213 +
1683185990.6753738-CDS-P-wetherbeei_contig13566:404..7131683185990.6753738-CDS-P-wetherbeei_contig13566:404..713Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13566 405..713 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13566.1.1prot_P-wetherbeei_contig13566.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13566 67..713 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13566.1.1

>prot_P-wetherbeei_contig13566.1.1 ID=prot_P-wetherbeei_contig13566.1.1|Name=mRNA_P-wetherbeei_contig13566.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp
MGNNKTSPTDWMAAWRTLERLYREDSAICAIGVSNFEAWRLRELLDLAEE
APHVVQNWMDPFHQDRSTREVCAENGIHYTAYSLLGSQWAYRTLPDRSRL
PPGSNPVLSDPAVAGIAAAQGVSAAAVVLSWALQRGVSVLPRSGDLAHIR
EN
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mRNA from alignment at P-wetherbeei_contig13566:67..713+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13566.1.1 ID=mRNA_P-wetherbeei_contig13566.1.1|Name=mRNA_P-wetherbeei_contig13566.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=647bp|location=Sequence derived from alignment at P-wetherbeei_contig13566:67..713+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGAAATAACAAAACCAGCCCGACCGACTGGATGGCGGCGTGGCGGAC GCTGGAGCGGCTCTACCGGGAGGACAGCGCCATCTGTGCCATCGGTGTCA GCAACTTTGAGGCGTGGCGCCTGCGCGAGCTCCTCGATCTGGCGGAGGTA AGATCACGAGAAAGGAAAACCGATAGTTTGCCCGGAATGAAGCGGCAACG AAAGACGGGAAAGGGTCATAAGAGCAAATTAAAACATCGCTTCGGTGTTG GACAATGTATCAGCCGCTTGCAGATTCGCCAGGAACTGGCAAGGGCGGCG TTTAGCAATCAAATTTCAAAACTCTCAACGAAAAACAGGAGGCACCGCAC GTCGTGCAGAACTGGATGGACCCCTTCCACCAGGACCGATCTACCCGGGA GGTATGCGCTGAAAACGGCATTCACTACACTGCCTACAGCTTACTTGGCT CCCAGTGGGCGTACCGGACTCTACCAGACAGAAGCCGTCTGCCGCCCGGA TCTAACCCGGTGCTCTCCGACCCGGCGGTGGCGGGAATCGCGGCGGCGCA GGGCGTCTCAGCGGCAGCAGTGGTGCTGTCGTGGGCGCTGCAGCGCGGCG TTTCCGTTTTGCCGCGCTCGGGAGATCTGGCGCACATCCGAGAGAAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13566:67..713+

>mRNA_P-wetherbeei_contig13566.1.1 ID=mRNA_P-wetherbeei_contig13566.1.1|Name=mRNA_P-wetherbeei_contig13566.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig13566:67..713+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGAAATAACAAAACCAGCCCGACCGACTGGATGGCGGCGTGGCGGAC
GCTGGAGCGGCTCTACCGGGAGGACAGCGCCATCTGTGCCATCGGTGTCA
GCAACTTTGAGGCGTGGCGCCTGCGCGAGCTCCTCGATCTGGCGGAGGAG
GCACCGCACGTCGTGCAGAACTGGATGGACCCCTTCCACCAGGACCGATC
TACCCGGGAGGTATGCGCTGAAAACGGCATTCACTACACTGCCTACAGCT
TACTTGGCTCCCAGTGGGCGTACCGGACTCTACCAGACAGAAGCCGTCTG
CCGCCCGGATCTAACCCGGTGCTCTCCGACCCGGCGGTGGCGGGAATCGC
GGCGGCGCAGGGCGTCTCAGCGGCAGCAGTGGTGCTGTCGTGGGCGCTGC
AGCGCGGCGTTTCCGTTTTGCCGCGCTCGGGAGATCTGGCGCACATCCGA
GAGAAC
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