mRNA_P-wetherbeei_contig13535.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13535.1.1
Unique NamemRNA_P-wetherbeei_contig13535.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig13535.1.1 vs. uniprot
Match: A0A835YLX0_9STRA (3-phosphoinositide-dependent protein kinase Serine/threonine protein phosphatase 2A, regulato n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLX0_9STRA)

HSP 1 Score: 122 bits (307), Expect = 5.580e-27
Identity = 56/92 (60.87%), Postives = 70/92 (76.09%), Query Frame = 2 
Query:    2 KLLRCMSVDNSRVVEKALFLWKSEHFRALVRPQTGHLMRPLMAALLRGGQPFWNPTVNKMAAHVLETLEELDPDAFRAAAEDLWGKGRTPEP 277
            +L  C++++NSRVVE+ALF+W+ + FRAL+ P       PL+AALLRGG  FWNPTVNKMAAHVL+ LE +DP AF AAAE+LWG GR   P
Sbjct:  324 RLTHCLALENSRVVERALFMWRDDAFRALLAPHARVAAAPLLAALLRGGATFWNPTVNKMAAHVLQQLEAMDPAAFAAAAEELWGAGRDAPP 415
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BLAST of mRNA_P-wetherbeei_contig13535.1.1 vs. uniprot
Match: D7FVC6_ECTSI (3-phosphoinositide-dependent protein kinase (PDK1) Serine/threonine protein phosphatase 2A, regulato n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC6_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.960e-22
Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 2 
Query:    2 KLLRCMSVDNSRVVEKALFLWKSEHFRALVRPQTGHLMRPLMAALLRGGQPFWNPTVNKMAAHVLETLEELDPDAFRAAAEDLWGK 259
            K+L C+ V+NSRVVE+AL+L+K EH   ++   T     PL++ALLRGG+PFWNPTVNKM A VLE+LE+ D  AF AA E LWG+
Sbjct:  277 KILACLRVENSRVVERALYLFKDEHLLDVLAANTSTTFLPLLSALLRGGEPFWNPTVNKMTARVLESLEDKDSTAFAAACESLWGQ 362
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BLAST of mRNA_P-wetherbeei_contig13535.1.1 vs. uniprot
Match: A0A6H5K2H1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H1_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.420e-18
Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 2 
Query:    2 KLLRCMSVDNSRVVEKALFLWKSEHFRALVRPQTGHLMRPLMAALLRGGQPFWNPTVNK--------------MAAHVLETLEELDPDAFRAAAEDLWGK 259
            K+L C+ V+NSRVVE+AL+L+K EH   ++   T     PL++ALLRGG+PFWNPTVNK              M A VL++LE+ D  AF AA E LWG+
Sbjct:  109 KILACLRVENSRVVERALYLFKDEHLLDVLAANTSTTFLPLLSALLRGGEPFWNPTVNKASDNWISNDSSMKQMTARVLKSLEDKDSTAFAAACETLWGQ 208
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BLAST of mRNA_P-wetherbeei_contig13535.1.1 vs. uniprot
Match: A0A7S0ABZ5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0ABZ5_9DINO)

HSP 1 Score: 90.5 bits (223), Expect = 5.720e-18
Identity = 39/88 (44.32%), Postives = 58/88 (65.91%), Query Frame = 2 
Query:    2 KLLRCMSVDNSRVVEKALFLWKSEHFRALVRPQTGHLMRPLMAALLRGGQPFWNPTVNKMAAHVLETLEELDPDAFRAAAEDLWGKGR 265
            +++R +   N++ ++  L  WK +H   L +  +  L+  L+  LLRGG+PFWNPTVN+M + VLE LE  +P+AF  AAED+WG GR
Sbjct:   38 QMVRLLGSHNAQPIQSVLQFWKDDHIAELFQAVSEQLIPALLPVLLRGGEPFWNPTVNRMTSLVLEKLERSNPEAFAGAAEDVWGPGR 125
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BLAST of mRNA_P-wetherbeei_contig13535.1.1 vs. uniprot
Match: A0A7S2KEA3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2KEA3_9DINO)

HSP 1 Score: 86.3 bits (212), Expect = 2.560e-15
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 2 
Query:    2 KLLRCMSVDNSRVVEKALFLWKSEHFRALVRPQTGHLMRPLMAALLRGGQPFWNPTVNKMAAHVLETLEELDPDAFRAAAEDLWGKGR 265
            +++R +   NS+ ++  L  WK +   +L    +   +  L+ ALLRGG+PFWNPTVN+M   VLE LE  +P+AF  AAEDLWG G+
Sbjct:  215 QMVRLLGSHNSQPIQSVLQYWKDDRIASLFAAMSTEFIPVLLPALLRGGEPFWNPTVNRMTTLVLEKLEASNPEAFFHAAEDLWGPGK 302
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BLAST of mRNA_P-wetherbeei_contig13535.1.1 vs. uniprot
Match: A0A0M0K5B4_9EUKA (Camp-dependent protein kinase catalytic subunit isoform n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K5B4_9EUKA)

HSP 1 Score: 71.6 bits (174), Expect = 6.510e-10
Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 2 
Query:    5 LLRCMSVDNSRVVEKALFLWKSEHFRALVRPQTGHLMRPLMAALLRGGQPFWNPTVNKMAAHVLETLEELDPDAFRAAAEDLW 253
            L RC+S DNSRV E+AL ++ S+  RA +       +  L+ AL+RGG P WN TVNKM    L  L E D   F AAA+ ++
Sbjct:  300 LARCISSDNSRVAERALTIFASDGARATLTSDFDGCVPLLLGALVRGGVPHWNATVNKMTHEALRLLSEADAGGFAAAAKQIF 382
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BLAST of mRNA_P-wetherbeei_contig13535.1.1 vs. uniprot
Match: A0A7S2UJW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJW1_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 7.330e-8
Identity = 34/95 (35.79%), Postives = 56/95 (58.95%), Query Frame = 2 
Query:    2 KLLRCMSVDNSRVVEKALFLWKSEHFRALVRPQTGHLMRPLMAALLRGGQPF---WNPTVNKMAAHVLETLEELDPDAFRAAAEDLWGKGRTPEP 277
            +L  C+S DNSR+ E+AL  +K+  F+AL++     ++ PL+ AL+R        WNPTV +M   VL+ LE ++P  F +A + +     +P+P
Sbjct:   63 RLASCISSDNSRLSERALQYFKNVQFQALIQDSFVAIIEPLLKALIRMDTSMEIPWNPTVRRMTLLVLQQLEAMNPTQFASACQSILTGRPSPQP 157
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BLAST of mRNA_P-wetherbeei_contig13535.1.1 vs. uniprot
Match: A0A7S4JHC8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JHC8_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.990e-7
Identity = 36/87 (41.38%), Postives = 49/87 (56.32%), Query Frame = 2 
Query:    2 KLLRCMSVDNSRVVEKALFLWKSEHFRALVRPQTGHLMRPLMAALLRGGQPF---WNPTVNKMAAHVLETLEELDPDAFRAAAEDLW 253
            ++  C S DNSR  E+AL  +K++ F  LVR     ++  L+ AL R        WNPTV KM   VL+ LE+LD + FR   EDL+
Sbjct:  534 RISSCASGDNSRTSERALQFFKNKQFLHLVRTHYADVLPRLLRALCRVDDSMEVPWNPTVRKMILLVLKELEKLDAEEFRKGCEDLF 620
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BLAST of mRNA_P-wetherbeei_contig13535.1.1 vs. uniprot
Match: A0A1Q9DAM5_SYMMI (Calmodulin n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DAM5_SYMMI)

HSP 1 Score: 61.2 bits (147), Expect = 1.710e-6
Identity = 29/75 (38.67%), Postives = 42/75 (56.00%), Query Frame = 2 
Query:    5 LLRCMSVDNSRVVEKALFLWKSEHFRALVRPQTGHLMRPLMAALLRGGQPFWNPTVNKMAAHVLETLEELDPDAF 229
            +LR ++  N + ++  L LWK E    L+      L+  ++  L+R G+ FWNPTVNKM   VLE LE   P+A 
Sbjct:  880 ILRLLTSQNGQTLQSVLQLWKDERVSKLLANFADSLIPGMLPLLVRDGEVFWNPTVNKMTCLVLEKLEAASPEAL 954
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BLAST of mRNA_P-wetherbeei_contig13535.1.1 vs. uniprot
Match: A0A5A8E6W5_CAFRO (Protein kinase domain-containing protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E6W5_CAFRO)

HSP 1 Score: 60.1 bits (144), Expect = 3.800e-6
Identity = 32/80 (40.00%), Postives = 43/80 (53.75%), Query Frame = 2 
Query:   26 DNSRVVEKALFLWKSEHFRALVRPQTGHLMRPLMAALLRGGQPFWNPTVNKMAAHVLETLEELDPDAFRAAAEDLWGKGR 265
            + S++ ++ L +++    R  + P  G L R L+ ALLRGG P WN TVNK    VL  L   DP AF  AA   +G  R
Sbjct:  346 EYSQLAQRLLSVFREPASRKRLAPFAGQLNRALVPALLRGGSPHWNSTVNKQTRAVLAWLAGCDPGAFAEAASATFGGAR 425
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13535.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A835YLX0_9STRA5.580e-2760.873-phosphoinositide-dependent protein kinase Serine... [more]
D7FVC6_ECTSI1.960e-2258.143-phosphoinositide-dependent protein kinase (PDK1)... [more]
A0A6H5K2H1_9PHAE1.420e-1849.00Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S0ABZ5_9DINO5.720e-1844.32Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
A0A7S2KEA3_9DINO2.560e-1544.32Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A0M0K5B4_9EUKA6.510e-1044.58Camp-dependent protein kinase catalytic subunit is... [more]
A0A7S2UJW1_9STRA7.330e-835.79Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S4JHC8_9STRA2.990e-741.38Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A1Q9DAM5_SYMMI1.710e-638.67Calmodulin n=3 Tax=Symbiodinium TaxID=2949 RepID=A... [more]
A0A5A8E6W5_CAFRO3.800e-640.00Protein kinase domain-containing protein n=6 Tax=C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13535contigP-wetherbeei_contig13535:62..1399 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FVC6
PFAMsB56,Pkinase
Model size1059
Max annot lvl2759|Eukaryota
KEGG koko:K06276,ko:K11584
KEGG Pathwayko01524,ko03015,ko03320,ko04011,ko04068,ko04071,ko04113,ko04114,ko04140,ko04150,ko04151,ko04152,ko04210,ko04261,ko04510,ko04660,ko04664,ko04722,ko04728,ko04910,ko04919,ko04931,ko04960,ko05145,ko05160,ko05165,ko05205,ko05213,ko05215,ko05223,ko05231,map01524,map03015,map03320,map04011,map04068,map04071,map04113,map04114,map04140,map04150,map04151,map04152,map04210,map04261,map04510,map04660,map04664,map04722,map04728,map04910,map04919,map04931,map04960,map05145,map05160,map05165,map05205,map05213,map05215,map05223,map05231
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.14e-20
EggNOG OGsKOG0592@1|root,KOG2085@1|root,KOG0592@2759|Eukaryota,KOG2085@2759|Eukaryota
EC2.7.11.1
Descriptionprotein phosphatase regulator activity
Cds size1041
COG categoryZ
BRITEko00000,ko00001,ko01000,ko01001,ko01009,ko03036,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185989.7798321-CDS-P-wetherbeei_contig13535:61..9401683185989.7798321-CDS-P-wetherbeei_contig13535:61..940Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13535 62..940 -
1683185989.79572-CDS-P-wetherbeei_contig13535:1221..13831683185989.79572-CDS-P-wetherbeei_contig13535:1221..1383Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13535 1222..1383 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185989.804564-UTR-P-wetherbeei_contig13535:1383..13991683185989.804564-UTR-P-wetherbeei_contig13535:1383..1399Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13535 1384..1399 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13535.1.1prot_P-wetherbeei_contig13535.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13535 62..1383 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13535.1.1

>prot_P-wetherbeei_contig13535.1.1 ID=prot_P-wetherbeei_contig13535.1.1|Name=mRNA_P-wetherbeei_contig13535.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=347bp
MSVDNSRVVEKALFLWKSEHFRALVRPQTGHLMRPLMAALLRGGQPFWNP
TVNKMAAHVLETLEELDPDAFRAAAEDLWGKGRTPEPLPEPVAPAPLPGS
GAPQPQRPRNAVPSSLGGGGGGIVAWNMQKACGAAGGPGLPGASDTATAA
VGTEAAGAGPARSHLHANSTTPITPAPWATGAPLVSVNASMGRWHPGRHI
NGGGGVNGVGGASSDGSHGSGTRSGRSGPAMQPPLTITGVAPWAFKSGGA
GGAGGAARRTLIGGPRTGSGGSSGSSGGGGGGGIIGAGRASQRVSPPLKR
PLPPPASQSPREADSEGRYRMDEGEEGEEGEEEAQEEQPGGRWSGGG
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mRNA from alignment at P-wetherbeei_contig13535:62..1399-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13535.1.1 ID=mRNA_P-wetherbeei_contig13535.1.1|Name=mRNA_P-wetherbeei_contig13535.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1338bp|location=Sequence derived from alignment at P-wetherbeei_contig13535:62..1399- (Phaeothamnion wetherbeei SAG_119_79)
GAAGCTGCTGCGGTGCATGTCCGTGGACAACAGCCGCGTCGTGGAGAAGG
CCCTCTTCCTGTGGAAGTCGGAGCACTTTCGGGCGCTGGTCCGCCCGCAG
ACGGGGCATCTGATGCGCCCGCTCATGGCGGCGCTGCTCCGCGGCGGACA
GCCTTTTTGGAACCCCACCGTTAACAAGGTGAGGCGGGGGAGGCGGAAGA
AGAAAGAGTTGGAGGTTGGCGGCAGGCAGGTGGCAGAGGTGCAGAGGGTA
ACGAGCGATCTGACGAACAGCCATGCCTGGAATCTTTCGCCCTTTTGAAT
GCTCCTCTCTCTCCTCGCGTCTTGCTTCGCTTTATTTGACCTTTGCCTTT
CACGTAAACCCACTAACAGCACCTCGGGCTGTCGCCGTTGGCAAACCTCT
GAATAACGTCTTTGTGCCGTCGCGCGCGCTTTCTTCTTCTTCCTCAAATC
TGCCGTCAGATGGCGGCGCACGTGCTGGAGACGCTCGAAGAACTCGACCC
GGACGCCTTCCGAGCGGCAGCAGAGGACCTCTGGGGGAAGGGCCGGACTC
CGGAGCCGCTACCAGAGCCGGTGGCGCCTGCACCACTGCCTGGTTCCGGC
GCACCACAGCCGCAGCGGCCCCGAAATGCCGTACCAAGCAGTCTTGGCGG
CGGCGGCGGCGGCATTGTTGCCTGGAACATGCAGAAAGCATGCGGCGCAG
CTGGAGGACCGGGACTGCCCGGCGCCAGTGATACGGCAACAGCGGCAGTA
GGGACGGAAGCGGCGGGAGCAGGGCCGGCGAGGTCCCACCTGCACGCAAA
TTCGACGACGCCAATAACGCCGGCACCGTGGGCGACGGGCGCGCCCCTCG
TCTCGGTCAACGCCTCCATGGGCAGGTGGCATCCGGGACGTCATATAAAC
GGCGGCGGCGGCGTCAACGGCGTTGGCGGCGCCAGCAGTGACGGCAGCCA
TGGCAGCGGGACGCGGTCAGGACGGTCAGGGCCGGCCATGCAGCCGCCGC
TGACCATCACGGGAGTCGCGCCTTGGGCGTTTAAAAGCGGCGGTGCGGGC
GGCGCGGGCGGCGCCGCCCGGCGAACCCTGATTGGTGGGCCGAGGACTGG
CAGCGGCGGTTCATCTGGCAGCTCAGGCGGCGGCGGCGGCGGCGGCATCA
TTGGGGCAGGGCGAGCATCGCAGAGAGTTTCCCCGCCTCTGAAGCGCCCG
CTGCCGCCGCCGGCGTCGCAATCGCCGCGAGAGGCTGATAGTGAGGGGAG
GTACCGCATGGACGAAGGGGAGGAGGGTGAGGAAGGGGAGGAGGAAGCAC
AGGAAGAGCAACCGGGTGGACGGTGGAGCGGCGGCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13535:62..1399-

>mRNA_P-wetherbeei_contig13535.1.1 ID=mRNA_P-wetherbeei_contig13535.1.1|Name=mRNA_P-wetherbeei_contig13535.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1041bp|location=Sequence derived from alignment at P-wetherbeei_contig13535:62..1399- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCCGTGGACAACAGCCGCGTCGTGGAGAAGGCCCTCTTCCTGTGGAA
GTCGGAGCACTTTCGGGCGCTGGTCCGCCCGCAGACGGGGCATCTGATGC
GCCCGCTCATGGCGGCGCTGCTCCGCGGCGGACAGCCTTTTTGGAACCCC
ACCGTTAACAAGATGGCGGCGCACGTGCTGGAGACGCTCGAAGAACTCGA
CCCGGACGCCTTCCGAGCGGCAGCAGAGGACCTCTGGGGGAAGGGCCGGA
CTCCGGAGCCGCTACCAGAGCCGGTGGCGCCTGCACCACTGCCTGGTTCC
GGCGCACCACAGCCGCAGCGGCCCCGAAATGCCGTACCAAGCAGTCTTGG
CGGCGGCGGCGGCGGCATTGTTGCCTGGAACATGCAGAAAGCATGCGGCG
CAGCTGGAGGACCGGGACTGCCCGGCGCCAGTGATACGGCAACAGCGGCA
GTAGGGACGGAAGCGGCGGGAGCAGGGCCGGCGAGGTCCCACCTGCACGC
AAATTCGACGACGCCAATAACGCCGGCACCGTGGGCGACGGGCGCGCCCC
TCGTCTCGGTCAACGCCTCCATGGGCAGGTGGCATCCGGGACGTCATATA
AACGGCGGCGGCGGCGTCAACGGCGTTGGCGGCGCCAGCAGTGACGGCAG
CCATGGCAGCGGGACGCGGTCAGGACGGTCAGGGCCGGCCATGCAGCCGC
CGCTGACCATCACGGGAGTCGCGCCTTGGGCGTTTAAAAGCGGCGGTGCG
GGCGGCGCGGGCGGCGCCGCCCGGCGAACCCTGATTGGTGGGCCGAGGAC
TGGCAGCGGCGGTTCATCTGGCAGCTCAGGCGGCGGCGGCGGCGGCGGCA
TCATTGGGGCAGGGCGAGCATCGCAGAGAGTTTCCCCGCCTCTGAAGCGC
CCGCTGCCGCCGCCGGCGTCGCAATCGCCGCGAGAGGCTGATAGTGAGGG
GAGGTACCGCATGGACGAAGGGGAGGAGGGTGAGGAAGGGGAGGAGGAAG
CACAGGAAGAGCAACCGGGTGGACGGTGGAGCGGCGGCGGC
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