mRNA_P-wetherbeei_contig13526.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13526.1.1 vs. uniprot
Match: A0A6H5JL08_9PHAE (Transcriptional adapter n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL08_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 3.920e-12 Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 1 NLQLDAREKRKRFAMENKFFDHKHVMAMDKKRTKDEKELAGRMRPYQRFSGSPAEHEQKIGDIAQMNYLMNRIEQLKRARSMGCRTLQEAEEYEADVRRRADEGASQQQRE 333
N +LD REKRK+F +EN D+K KKR+++++EL R+RP+ RFS S EH++ I ++ + RIE L+ R G T+ E E++ +RR +E ASQ+ RE
Sbjct: 376 NHRLDEREKRKKFVIENNLLDYKKPPPGSKKRSREDRELVARLRPFARFS-SAKEHDELIDNLIAAKKIRARIETLQMYRQNGITTIAEGIEFDKARQRRQEELASQKHRE 485
BLAST of mRNA_P-wetherbeei_contig13526.1.1 vs. uniprot
Match: A0A7S3M4W2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4W2_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.280e-11 Identity = 40/100 (40.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 1 NLQLDAREKRKRFAMENKFFDHKHVMAMDKKRTKDEKELAGRMRPYQRFSGSPAEHEQKIGDIAQMNYLMNRIEQLKRARSMGCRTLQEAEEYEADVRRR 300
N +L R +RK F +E D K DK+RTK+E++L GR+R + RF S EHE + + + L +IE + R MG RTL++A++YEA+ R R
Sbjct: 47 NHKLQERNRRKEFVIERGLIDFKLQQQQDKRRTKEERDLVGRLRVFARFQ-SKEEHEALVEGLLRAGKLRQQIELYRTYRQMGVRTLEQAKQYEANKRLR 145
BLAST of mRNA_P-wetherbeei_contig13526.1.1 vs. uniprot
Match: A0A1Y1HU23_KLENI (Histone acetyltransferase complex component n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HU23_KLENI) HSP 1 Score: 67.8 bits (164), Expect = 6.480e-11 Identity = 41/111 (36.94%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 1 NLQLDAREKRKRFAMENKFFDHKHVMAMDKKRTKDEKELAGRMRPYQRFSGSPAEHEQKIGDIAQMNYLMNRIEQLKRARSMGCRTLQEAEEYEADVRRRADEGASQQQRE 333
N +LD R +RK F +E + K A+D+KRT++E+EL R R + RF+ + E ++ + + + +RI++LK R+MG RT+ EA +YE+D ++R E ++QRE
Sbjct: 367 NHRLDERRRRKEFILERGLLNLKKQQALDRKRTREERELYNRARVFARFT-TQEEIDELVSGLLAERRIRDRIDELKEYRAMGIRTMAEAADYESDKKKRDVEAQQRKQRE 476
BLAST of mRNA_P-wetherbeei_contig13526.1.1 vs. uniprot
Match: UPI001CFD951F (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD951F) HSP 1 Score: 67.0 bits (162), Expect = 1.260e-10 Identity = 38/99 (38.38%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 4 LQLDAREKRKRFAMENKFFDHKHVMAMDKKRTKDEKELAGRMRPYQRFSGSPAEHEQKIGDIAQMNYLMNRIEQLKRARSMGCRTLQEAEEYEADVRRR 300
+L RE+R++FA+E + D K + A++KKRTK EKEL + RP+ RF + E E+ + I Q + RI++LK R+ G +L + Y+AD ++R
Sbjct: 386 FRLSERERRRKFAIERQLVDWKKISAIEKKRTKMEKELYQKYRPFARFLDNQDEFEEFMTGIIQETKIRTRIQELKEYRANGLTSLSQCATYDADNKKR 484
BLAST of mRNA_P-wetherbeei_contig13526.1.1 vs. uniprot
Match: A0A5B8MW70_9CHLO (Transcriptional adapter n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MW70_9CHLO) HSP 1 Score: 65.5 bits (158), Expect = 4.130e-10 Identity = 42/101 (41.58%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 7 QLDAREKRKRFAMENKFFDHKHVMAMDKKRTKDEKELAGRMRPYQRFSGSPAEHEQKIGDIAQMNYLMNRIEQLKRARSMGCRTLQEAEEYEADVRRRADE 309
Q + EKRK F ++ F + + ++K+RT++EKE+ MR + RF +P EH++ +G I + L RI +LK R MG TL EAE YE D RRR E
Sbjct: 332 QRERYEKRK-FVLDRHFLNVRKQQLVEKRRTREEKEIHACMRVFARFQ-TPDEHDELVGGICKEQRLRKRISELKEYRKMGILTLAEAEFYEQDKRRRESE 430
BLAST of mRNA_P-wetherbeei_contig13526.1.1 vs. uniprot
Match: D8RME1_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RME1_SELML) HSP 1 Score: 64.7 bits (156), Expect = 7.620e-10 Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query: 10 LDAREKRKRFAMENKFFDHKHVMAMDKKRTKDEKELAGRMRPYQRFSGSPAEHEQKIGDIAQMNYLMNRIEQLKRARSMGCRTLQEAEEYEADVRRRADE 309
L+ R++RK F +E + K A+D+K+TK+EKEL R R + R+ S EHE + + + RIE+L+ RS GC TL E E Y D R+R+ E
Sbjct: 291 LEERKRRKDFILERGLLNVKRQQALDRKKTKEEKELIQRSRVFLRYHSSE-EHEALLAGLTAEIKIRQRIEELQEYRSAGCHTLAEGEYYAMDKRKRSAE 389
BLAST of mRNA_P-wetherbeei_contig13526.1.1 vs. uniprot
Match: A0A2K1IJ37_PHYPA (Transcriptional adapter n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IJ37_PHYPA) HSP 1 Score: 60.1 bits (144), Expect = 3.240e-8 Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query: 10 LDAREKRKRFAMENKFFDHKHVMAMDKKRTKDEKELAGRMRPYQRFSGSPAEHEQKIGDIAQMNYLMNRIEQLKRARSMGCRTLQEAEEYEADVRRRADE 309
LD R++RK F +E + K A+D+KRTK+E+EL R R + R+ S EHE + + L RIE+L+ R GC + +AE Y ++ ++R E
Sbjct: 370 LDERKRRKDFILERGLLNIKRQQALDRKRTKEERELYNRSRVFMRYH-SAEEHEALLNGLIAERKLRQRIEELQEYRMNGCHIMADAEVYCSEKKKRETE 468
BLAST of mRNA_P-wetherbeei_contig13526.1.1 vs. uniprot
Match: A0A371DR04_9APHY (SWIRM-domain-containing protein n=4 Tax=Polyporaceae TaxID=5317 RepID=A0A371DR04_9APHY) HSP 1 Score: 58.2 bits (139), Expect = 1.540e-7 Identity = 35/98 (35.71%), Postives = 59/98 (60.20%), Query Frame = 1
Query: 10 LDAREKRKRFAMENKFFDHKHVMAMDKKRTKDEKELAGRMRPYQRFSGSPAEHEQKIGDIAQMNYLMNRIEQLKRARSMGCRTLQEAEEYEADVRRRA 303
+D R + K + ++K + A DKKR+K+EK++ R+RP+ R + + EQ DI + L RI++L+ R++G RT + E+YEAD ++RA
Sbjct: 323 VDKRLEAKSIMFDRGLLNYKQMQAADKKRSKEEKDILHRLRPFARLQ-TAEDFEQFQADILYEHMLRKRIKELQLYRTLGLRTPADIEKYEADFQKRA 419
BLAST of mRNA_P-wetherbeei_contig13526.1.1 vs. uniprot
Match: A0A099NUP0_PICKU (Transcriptional adapter 2 n=1 Tax=Pichia kudriavzevii TaxID=4909 RepID=A0A099NUP0_PICKU) HSP 1 Score: 57.8 bits (138), Expect = 2.000e-7 Identity = 36/96 (37.50%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 1 NLQLDAREKRKRFAMENKFFDHKHVMAMDKKRTKDEKELAGRMRPYQRFSGSPAEHEQKIGDIAQMNYLMNRIEQLKRARSMGCRTLQEAEEYEAD 288
N +L R +RKR + + D+K A+DKKR+K+EKEL +++P+ R S + ++ DI + + NRI QL+ R G TL+E E+YE +
Sbjct: 209 NEKLTLRAERKRLMINDNLLDYKTNNAIDKKRSKEEKELYNKIKPFARIMSSN-DFQEFSDDILKEFKIRNRINQLQNWRKNGILTLEEGEQYERE 303
BLAST of mRNA_P-wetherbeei_contig13526.1.1 vs. uniprot
Match: A0A507FK16_9FUNG (ER membrane protein complex subunit 4 n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FK16_9FUNG) HSP 1 Score: 57.4 bits (137), Expect = 2.860e-7 Identity = 38/102 (37.25%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 1 NLQLDAREKRKRFAME-NKFFDHKHVMAMDKKRTKDEKELAGRMRPYQRFSGSPAEHEQKIGDIAQMNYLMNRIEQLKRARSMGCRTLQEAEEYEADVRRRA 303
N LD R +RK+F + N D + + ++KKRTKDE++L R+R + +F S A+ E+ + + L RI +L+ R MGC T EA EYE + +R+
Sbjct: 394 NTTLDRRIERKKFLKDRNLTHDFRKLQNIEKKRTKDERDLLNRIRVFAKFQSS-ADFEEFTEGLMREQKLRQRIAELQEFRRMGCTTFTEAAEYEKEKYQRS 494 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13526.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13526.1.1 >prot_P-wetherbeei_contig13526.1.1 ID=prot_P-wetherbeei_contig13526.1.1|Name=mRNA_P-wetherbeei_contig13526.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp NLQLDAREKRKRFAMENKFFDHKHVMAMDKKRTKDEKELAGRMRPYQRFSback to top mRNA from alignment at P-wetherbeei_contig13526:72..955+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13526.1.1 ID=mRNA_P-wetherbeei_contig13526.1.1|Name=mRNA_P-wetherbeei_contig13526.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=884bp|location=Sequence derived from alignment at P-wetherbeei_contig13526:72..955+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13526:72..955+ >mRNA_P-wetherbeei_contig13526.1.1 ID=mRNA_P-wetherbeei_contig13526.1.1|Name=mRNA_P-wetherbeei_contig13526.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig13526:72..955+ (Phaeothamnion wetherbeei SAG_119_79)back to top |