mRNA_P-wetherbeei_contig13505.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13505.1.1 vs. uniprot
Match: A0A835YYR0_9STRA (GAF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYR0_9STRA) HSP 1 Score: 140 bits (354), Expect = 9.350e-37 Identity = 97/198 (48.99%), Postives = 115/198 (58.08%), Query Frame = 1
Query: 1 GISTMAAAALGNLVSDIFGVGLGGVVESWAQRLGLPDPGLSRAQMQLPRTRFASHAGCAIGITIGCLIGMFPLLLLPDARRRHSKQR-GQLAARIDNLLRAAAAAVGAEAATLLIFDTDSEDAPAGSGDSSDSGGADPA-------SMGIAGRAAASSRPARLLPGSGGDERSPAVLCVPVLGRGGRVIAVLQAVGKR 570
GISTMAAAALGNLVSD+ GVGLGGVVE WA ++GLPDPGLSRAQM L R A H GCAIG+TIGCL+GMFPLLLLP K+R + A +D ++ A + E TL I D D + S G D G GR A +P L D + +VLC+PV +V AV+QAVGKR
Sbjct: 116 GISTMAAAALGNLVSDLAGVGLGGVVEGWAAKIGLPDPGLSRAQMNLRSVRTAGHIGCAIGVTIGCLLGMFPLLLLPSPEALEEKKRIEKTVALVDVVMHEATDFLDCEGVTLFIADHDQQKLW------SQLRGYDSIRDLTLSFDEGPVGRVAREGKPLNLP----ADAATKSVLCMPVTDSRHKVRAVVQAVGKR 303
BLAST of mRNA_P-wetherbeei_contig13505.1.1 vs. uniprot
Match: A0A6H5J9W0_9PHAE (GAF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J9W0_9PHAE) HSP 1 Score: 130 bits (326), Expect = 5.140e-32 Identity = 90/201 (44.78%), Postives = 124/201 (61.69%), Query Frame = 1
Query: 1 GISTMAAAALGNLVSDIFGVGLGGVVESWAQRLGLPDPGLSRAQMQLPRTRFASHAGCAIGITIGCLIGMFPLLLLPDARRRHS-KQRGQLAARIDNLLRAAAAAVGAEAATLLIFDTDSEDAPA---GSGDSSDSGGADPASMGIAGRAAASS-----RPARLLPGSGGDERSPAVLCVPVLGRGGRVIAVLQAVGKRTS 576
GISTMAAAALGN +SD+ GVGLGGV+E+ A RLGLP LSRAQM L TR A G AIG+ +GCLIGMFPLL +PD + K++ ++ +D ++ AAA + A +ATL I D + E A G+ + ++G + +A R A S P + G+GG +P++LC+PV G G V V+Q VGK+++
Sbjct: 218 GISTMAAAALGNTISDVAGVGLGGVIENLATRLGLPPSKLSRAQMLLQATRTAGLVGSAIGVLVGCLIGMFPLLFMPDPEVMEAVKRKEKIVGLVDAVVEEAAAFLSATSATLFILDREHEILWARRRGAPGTPNAGALQDLKIELAHRGAVSDAARNGEPVIMPAGAGGA--APSMLCMPVYGADGLVAGVVQVVGKKSN 416
BLAST of mRNA_P-wetherbeei_contig13505.1.1 vs. uniprot
Match: A0A7S4JML9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JML9_9STRA) HSP 1 Score: 103 bits (257), Expect = 9.440e-25 Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 1
Query: 1 GISTMAAAALGNLVSDIFGVGLGGVVESWAQRLGLPDPGLSRAQMQLPRTRFASHAGCAIGITIGCLIGMFPLLLLPDARRRHSKQRGQLAARIDNLLRAAAAAVGAEA 327
GIST+ AAA+GN++SD+ GVGLG +E +A +L +P P L++AQ QL RFA GCAIG+TIGC+IGMFPLL + + K+ + + ++ A +GAEA
Sbjct: 45 GISTLCAAAIGNIISDLAGVGLGAAIEDFASKLNIPRPNLNQAQRQLRSVRFAGQFGCAIGLTIGCIIGMFPLLFIDSRKAEKMKEEAHIESMFYEMVTEAKRLIGAEA 153
BLAST of mRNA_P-wetherbeei_contig13505.1.1 vs. uniprot
Match: A0A5J5DCT4_9PERO (Uncharacterized protein (Fragment) n=3 Tax=Etheostoma spectabile TaxID=54343 RepID=A0A5J5DCT4_9PERO) HSP 1 Score: 99.0 bits (245), Expect = 1.520e-23 Identity = 49/88 (55.68%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 1 GISTMAAAALGNLVSDIFGVGLGGVVESWAQRLGLPDPGLSRAQMQLPRTRFASHAGCAIGITIGCLIGMFPLLLLPDARRRHSKQRG 264
GISTMAAAALGNLVSD+ G+GL G VE+ A +LG+ P L+ QM + +T+F+SH G AIG+TIGC++GMFPL L D + + + G
Sbjct: 17 GISTMAAAALGNLVSDLAGLGLAGYVEALASKLGMQGPDLTPEQMHMWQTKFSSHMGKAIGVTIGCILGMFPLFFLDDEKEKEAHPCG 104
BLAST of mRNA_P-wetherbeei_contig13505.1.1 vs. uniprot
Match: UPI00155F4C03 (transmembrane protein 65 n=1 Tax=Etheostoma cragini TaxID=417921 RepID=UPI00155F4C03) HSP 1 Score: 99.4 bits (246), Expect = 6.320e-23 Identity = 48/85 (56.47%), Postives = 65/85 (76.47%), Query Frame = 1
Query: 1 GISTMAAAALGNLVSDIFGVGLGGVVESWAQRLGLPDPGLSRAQMQLPRTRFASHAGCAIGITIGCLIGMFPLLLLPDARRRHSK 255
GISTMAAAALGNLVSD+ G+GL G VE+ A +LG+ P L+ QM + +T+F+SH G AIG+TIGC++GMFPL L D + + ++
Sbjct: 79 GISTMAAAALGNLVSDLAGLGLAGYVEALASKLGMQGPDLTPEQMHMWQTKFSSHMGKAIGVTIGCILGMFPLFFLDDEKEKEAR 163
BLAST of mRNA_P-wetherbeei_contig13505.1.1 vs. uniprot
Match: UPI000A2A69C3 (transmembrane protein 65 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A69C3) HSP 1 Score: 99.0 bits (245), Expect = 2.880e-22 Identity = 51/87 (58.62%), Postives = 61/87 (70.11%), Query Frame = 1
Query: 1 GISTMAAAALGNLVSDIFGVGLGGVVESWAQRLGLPDPGLSRAQMQLPRTRFASHAGCAIGITIGCLIGMFPLLLLPDARRRHSKQR 261
GISTMAAAALGN+VSD+ G+GL VE A +LG PGLS QM+LPRTRF ++ A GI IGC+IGMFPLL + D + S R
Sbjct: 134 GISTMAAAALGNIVSDVSGIGLAHYVELAANKLGFEGPGLSSKQMELPRTRFVNNVARAFGIVIGCIIGMFPLLFIKDRDDKESTSR 220
BLAST of mRNA_P-wetherbeei_contig13505.1.1 vs. uniprot
Match: A0A6P7NUY4_BETSP (transmembrane protein 65 n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7NUY4_BETSP) HSP 1 Score: 98.2 bits (243), Expect = 6.490e-22 Identity = 50/93 (53.76%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 1 GISTMAAAALGNLVSDIFGVGLGGVVESWAQRLGLPDPGLSRAQMQLPRTRFASHAGCAIGITIGCLIGMFPLLLLPDARRRHSKQRGQLAAR 279
GISTMAAAALGNLVSD+ G+GL G VE+ A RLG+ P L+ Q+ + +TR +SH G AIG++IGC++GMFPLL L D + + ++ + A+R
Sbjct: 132 GISTMAAAALGNLVSDLAGLGLAGYVEALASRLGMQVPDLTPKQVDMWQTRLSSHMGKAIGVSIGCILGMFPLLFLDDDKEKDAQSGSEAASR 224
BLAST of mRNA_P-wetherbeei_contig13505.1.1 vs. uniprot
Match: A0A7S3PD62_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD62_9STRA) HSP 1 Score: 102 bits (253), Expect = 6.880e-22 Identity = 84/221 (38.01%), Postives = 120/221 (54.30%), Query Frame = 1
Query: 1 GISTMAAAALGNLVSDIFGVGLGGVVESWAQR-LGLPDPGLSRAQMQLPRTRFASHAGCAIGITIGCLIGMFPLLLLPDARRRHSKQRGQLAARIDNLLRAAAAAVGAEAATLLIF---DTDSEDAP-------------AGSGDSSDSGGADPASMGIAGRAAAS----------SRP--ARLLPGSGGDERSPAVLCVPVLGRGGRVIAVLQAVGKRTS 576
GISTM AAA+GN+VSD+ GV LG VVE + R L LP P LS AQ QL RFA+ GCA+G+ IGC+IGMFPLL + + + K+ + A +++ A++ +GA L + + D+E+A G+ S +S GI RAA + S P + + GDE + ++LCVPVL G+ IAV+QA+GK ++
Sbjct: 190 GISTMCAAAIGNIVSDVAGVMLGTVVEDFCARYLDLPTPVLSTAQRQLASVRFANQFGCAVGLIIGCIIGMFPLLFIDSNKIQARKREAAMDAIFRDVMDEASSLIGARRTCLYVLCSKEPDNENALRPNSEGKYLYAKYGGTSTSQESARVITLGRGIVSRAALTGESWNIENVLSEPDFVKEEAEAAGDE-AKSMLCVPVLDGEGKTIAVIQALGKMST 409
BLAST of mRNA_P-wetherbeei_contig13505.1.1 vs. uniprot
Match: UPI0015A7ECE2 (transmembrane protein 65 isoform X3 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015A7ECE2) HSP 1 Score: 95.9 bits (237), Expect = 8.050e-22 Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 1
Query: 1 GISTMAAAALGNLVSDIFGVGLGGVVESWAQRLGLPDPGLSRAQMQLPRTRFASHAGCAIGITIGCLIGMFPLLLLPD 234
GISTMAAAALGNLVSD+ G+GL G VE+ A RLG+ P LS Q+ + +TR +SH G AIG+TIGCL+GMFPL L D
Sbjct: 53 GISTMAAAALGNLVSDLAGLGLAGYVEALAHRLGMQIPDLSPKQVDMWQTRVSSHMGKAIGVTIGCLLGMFPLFFLGD 130
BLAST of mRNA_P-wetherbeei_contig13505.1.1 vs. uniprot
Match: A0A3B3XU04_9TELE (Transmembrane protein 65 n=10 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A3B3XU04_9TELE) HSP 1 Score: 98.2 bits (243), Expect = 8.730e-22 Identity = 52/88 (59.09%), Postives = 63/88 (71.59%), Query Frame = 1
Query: 1 GISTMAAAALGNLVSDIFGVGLGGVVESWAQRLGLPDPGLSRAQMQLPRTRFASHAGCAIGITIGCLIGMFPLLLLPDARRRHSKQRG 264
GISTMAAAALGNLVSD+ G+GL G VE+ A RLG+ P L+ Q + +TR +SH G AIGITIGC++GMFPLL L D K+ G
Sbjct: 149 GISTMAAAALGNLVSDLAGLGLAGYVEALASRLGMQVPDLTPKQADMWQTRLSSHMGKAIGITIGCILGMFPLLFLSDDDEGEEKKNG 236 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13505.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13505.1.1 >prot_P-wetherbeei_contig13505.1.1 ID=prot_P-wetherbeei_contig13505.1.1|Name=mRNA_P-wetherbeei_contig13505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp MAAAALGNLVSDIFGVGLGGVVESWAQRLGLPDPGLSRAQMQLPRTRFASback to top mRNA from alignment at P-wetherbeei_contig13505:1..851+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13505.1.1 ID=mRNA_P-wetherbeei_contig13505.1.1|Name=mRNA_P-wetherbeei_contig13505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=851bp|location=Sequence derived from alignment at P-wetherbeei_contig13505:1..851+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13505:1..851+ >mRNA_P-wetherbeei_contig13505.1.1 ID=mRNA_P-wetherbeei_contig13505.1.1|Name=mRNA_P-wetherbeei_contig13505.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=564bp|location=Sequence derived from alignment at P-wetherbeei_contig13505:1..851+ (Phaeothamnion wetherbeei SAG_119_79)back to top |