mRNA_P-wetherbeei_contig13465.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13465.1.1 vs. uniprot
Match: A0A3B1C526_9ZZZZ (HTH marR-type domain-containing protein (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1C526_9ZZZZ) HSP 1 Score: 147 bits (371), Expect = 1.900e-43 Identity = 68/116 (58.62%), Postives = 94/116 (81.03%), Query Frame = 1
Query: 1 MPTHYQGSDEEVSSLNAYIKLMRAANAVERRLTPTISASGLTFSQFGVLEALHHIGPLCQRDLSEKLLLSGGNITMVVNNLEKQGLVVRLRTGNDKRYSTVHLTWRGTQMIKEIFP 348
M TH++GS++EV +LN +IKL+RA+ ++ R P ++A+GLT SQF LEAL+H+GPLCQ++L +K+L SGGN+TMVVNNLEK LV RLR ND+RY TVH+T +GT +IK++FP
Sbjct: 1 MGTHHKGSEKEVRALNTFIKLVRASESLVSRSLPILTAAGLTLSQFDALEALYHLGPLCQKELGQKMLKSGGNVTMVVNNLEKNELVKRLRRDNDRRYITVHITRKGTNIIKKLFP 116
BLAST of mRNA_P-wetherbeei_contig13465.1.1 vs. uniprot
Match: A0A3M1WGM4_9BACT (MarR family transcriptional regulator n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M1WGM4_9BACT) HSP 1 Score: 148 bits (373), Expect = 2.610e-43 Identity = 72/124 (58.06%), Postives = 96/124 (77.42%), Query Frame = 1
Query: 1 MPTHYQGSDEEVSSLNAYIKLMRAANAVERRLTPTISASGLTFSQFGVLEALHHIGPLCQRDLSEKLLLSGGNITMVVNNLEKQGLVVRLRTGNDKRYSTVHLTWRGTQMIKEIFPKHLKEVVK 372
M THY+G+DEEV +LN YIKLMRAA +V RL P I++ GLT SQFGVLEAL+H+GPLCQ +L++KLL S GNIT+V++NLEK+G V R R D+R V+LT G ++I++IFP H+ +V+
Sbjct: 1 MGTHYKGTDEEVRALNTYIKLMRAAESVTARLNPRIASYGLTLSQFGVLEALYHLGPLCQHELAKKLLKSSGNITLVIDNLEKRGFVRRRRERTDRRLVRVYLTPGGRRLIRDIFPGHVTAIVQ 124
BLAST of mRNA_P-wetherbeei_contig13465.1.1 vs. uniprot
Match: A0A3B0QQW7_9ZZZZ (HTH marR-type domain-containing protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0QQW7_9ZZZZ) HSP 1 Score: 147 bits (372), Expect = 6.210e-43 Identity = 72/124 (58.06%), Postives = 96/124 (77.42%), Query Frame = 1
Query: 1 MPTHYQGSDEEVSSLNAYIKLMRAANAVERRLTPTISASGLTFSQFGVLEALHHIGPLCQRDLSEKLLLSGGNITMVVNNLEKQGLVVRLRTGNDKRYSTVHLTWRGTQMIKEIFPKHLKEVVK 372
M THY+GS +E +LNAY+ LMRAA +V R T +++ +GLT SQFGVLEA++H+GPLCQR L+EK+L S GNI +VV+NLE+Q LVVR R D+RY TVHLT +G ++ E+FPK LK +V+
Sbjct: 1 MGTHYKGSRKEKQALNAYVALMRAAESVTSRTTGSMTEAGLTLSQFGVLEAIYHLGPLCQRALAEKILKSTGNIVVVVDNLERQSLVVRRRDKKDRRYVTVHLTDKGRWLVGEVFPKVLKSIVR 124
BLAST of mRNA_P-wetherbeei_contig13465.1.1 vs. uniprot
Match: A0A2N1UUF9_9BACT (MarR family transcriptional regulator n=1 Tax=Candidatus Melainabacteria bacterium HGW-Melainabacteria-1 TaxID=2013813 RepID=A0A2N1UUF9_9BACT) HSP 1 Score: 147 bits (371), Expect = 8.550e-43 Identity = 71/128 (55.47%), Postives = 97/128 (75.78%), Query Frame = 1
Query: 1 MPTHYQGSDEEVSSLNAYIKLMRAANAVERRLTPTISASGLTFSQFGVLEALHHIGPLCQRDLSEKLLLSGGNITMVVNNLEKQGLVVRLRTGNDKRYSTVHLTWRGTQMIKEIFPKHLKEVVKVFTV 384
M THYQG+ E+ +LNAYI +RAA ++ ++ ++SA GLT SQFGVLEA+ H+GPLCQR L+EKLL SGGNIT+V++NLEKQ LV R R D+RY TV LT RG +I+ IFP+H++ + ++ +V
Sbjct: 1 MGTHYQGTPEQEQALNAYINFIRAAESLSAQIHQSLSAKGLTESQFGVLEAIFHLGPLCQRALAEKLLKSGGNITLVIDNLEKQQLVERRRNPEDRRYITVSLTQRGQDLIETIFPEHVERITRLLSV 128
BLAST of mRNA_P-wetherbeei_contig13465.1.1 vs. uniprot
Match: A0A7X6I967_9BACT (MarR family transcriptional regulator n=1 Tax=Candidatus Manganitrophus noduliformans TaxID=2606439 RepID=A0A7X6I967_9BACT) HSP 1 Score: 147 bits (372), Expect = 1.270e-42 Identity = 72/124 (58.06%), Postives = 99/124 (79.84%), Query Frame = 1
Query: 1 MPTHYQGSDEEVSSLNAYIKLMRAANAVERRLTPTISASGLTFSQFGVLEALHHIGPLCQRDLSEKLLLSGGNITMVVNNLEKQGLVVRLRTGNDKRYSTVHLTWRGTQMIKEIFPKHLKEVVK 372
M THY+G+ EEV++L+ +IKLMRAA+++ RL+P ++++GLT QFG LE L H+GPLCQ +L KLL SGGNITMVV+NLE+ GLV R R G D+R+ T+HLT G Q+I++IFPKHL+ +V+
Sbjct: 1 MGTHYRGTREEVTALDTFIKLMRAADSLSSRLSPILASTGLTSGQFGALEVLLHLGPLCQSELGRKLLRSGGNITMVVDNLERSGLVRRER-GEDRRFITLHLTKEGRQLIQKIFPKHLEALVR 123
BLAST of mRNA_P-wetherbeei_contig13465.1.1 vs. uniprot
Match: UPI0019C25E53 (Winged helix-turn-helix transcriptional regulator n=1 Tax=Gloeobacterales cyanobacterium ES-bin-141 TaxID=2812628 RepID=UPI0019C25E53) HSP 1 Score: 146 bits (368), Expect = 1.500e-42 Identity = 72/128 (56.25%), Postives = 98/128 (76.56%), Query Frame = 1
Query: 1 MPTHYQGSDEEVSSLNAYIKLMRAANAVERRLTPTISASGLTFSQFGVLEALHHIGPLCQRDLSEKLLLSGGNITMVVNNLEKQGLVVRLRTGNDKRYSTVHLTWRGTQMIKEIFPKHLKEVVKVFTV 384
M T YQG+ EEV +L+ YIKL+RA ++V R+ ++A+GL+ SQFGVLEAL H+GPLCQRDL++KLL SGGNITMVV+NLEK+ LV R RT D+R+ +HLT G +MI ++FP H++ V++ V
Sbjct: 1 MGTRYQGTPEEVLALDTYIKLVRATSSVTARIHRHLTAAGLSASQFGVLEALLHLGPLCQRDLAQKLLTSGGNITMVVDNLEKRDLVRRERTTEDRRFICIHLTETGQEMISQLFPHHVEAVIETMAV 128
BLAST of mRNA_P-wetherbeei_contig13465.1.1 vs. uniprot
Match: A0A3B0VFK1_9ZZZZ (HTH marR-type domain-containing protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0VFK1_9ZZZZ) HSP 1 Score: 145 bits (367), Expect = 3.570e-42 Identity = 71/124 (57.26%), Postives = 95/124 (76.61%), Query Frame = 1
Query: 1 MPTHYQGSDEEVSSLNAYIKLMRAANAVERRLTPTISASGLTFSQFGVLEALHHIGPLCQRDLSEKLLLSGGNITMVVNNLEKQGLVVRLRTGNDKRYSTVHLTWRGTQMIKEIFPKHLKEVVK 372
M TH++GS E +LNAY+ LMRAA +V R T +++ +GLT SQFGVLEA++H+GPLCQR L+EK+L S GNI +VV+NLE+QGLVVR R D+RY VHLT +G ++ E+FPK LK +V+
Sbjct: 1 MGTHHKGSRREKQALNAYVALMRAAESVTSRTTGSMTDAGLTLSQFGVLEAIYHLGPLCQRALAEKILKSTGNIVVVVDNLERQGLVVRRRDRKDRRYVIVHLTGKGRGLVGEVFPKVLKSIVR 124
BLAST of mRNA_P-wetherbeei_contig13465.1.1 vs. uniprot
Match: A0A7V3QWZ5_9BACT (MarR family transcriptional regulator n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V3QWZ5_9BACT) HSP 1 Score: 145 bits (365), Expect = 5.810e-42 Identity = 70/128 (54.69%), Postives = 96/128 (75.00%), Query Frame = 1
Query: 1 MPTHYQGSDEEVSSLNAYIKLMRAANAVERRLTPTISASGLTFSQFGVLEALHHIGPLCQRDLSEKLLLSGGNITMVVNNLEKQGLVVRLRTGNDKRYSTVHLTWRGTQMIKEIFPKHLKEVVKVFTV 384
M THY+G++EE +LNA+I LMRA ++ RL+ ++ GLT +QFG LEAL H+GPLCQR+L KLL SGGNIT+VV+NLEKQGL+ R R G+D+RY TV+LT G ++I+ +F +HL +V+ V
Sbjct: 1 MGTHYEGTEEEKRALNAFITLMRAGESLSARLSRDLAGKGLTMTQFGALEALLHLGPLCQRELGSKLLRSGGNITLVVDNLEKQGLIRRDRDGSDRRYVTVNLTREGRRLIERVFREHLALIVEAMAV 128
BLAST of mRNA_P-wetherbeei_contig13465.1.1 vs. uniprot
Match: UPI001B13B8F9 (MarR family transcriptional regulator n=1 Tax=bacterium TaxID=1869227 RepID=UPI001B13B8F9) HSP 1 Score: 144 bits (364), Expect = 5.900e-42 Identity = 69/126 (54.76%), Postives = 94/126 (74.60%), Query Frame = 1
Query: 1 MPTHYQGSDEEVSSLNAYIKLMRAANAVERRLTPTISASGLTFSQFGVLEALHHIGPLCQRDLSEKLLLSGGNITMVVNNLEKQGLVVRLRTGNDKRYSTVHLTWRGTQMIKEIFPKHLKEVVKVF 378
MPT YQG EEV +LNAYI LMRAA++VE R+ ++ GLT SQFG LE L H+GP+C RDL +KLL + GNIT+V++NLEK+GLV R+R D+R T+HLT G ++I+ +FP+H+ + +VF
Sbjct: 1 MPTRYQGLPEEVRALNAYIPLMRAASSVEARVQRHLAEVGLTLSQFGALEILLHVGPMCARDLCQKLLTTSGNITLVLDNLEKRGLVRRVRESADRRVVTIHLTPEGEELIRAVFPRHVAGITQVF 126
BLAST of mRNA_P-wetherbeei_contig13465.1.1 vs. uniprot
Match: A0A3B1BTD2_9ZZZZ (HTH marR-type domain-containing protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1BTD2_9ZZZZ) HSP 1 Score: 144 bits (362), Expect = 1.190e-41 Identity = 66/124 (53.23%), Postives = 97/124 (78.23%), Query Frame = 1
Query: 1 MPTHYQGSDEEVSSLNAYIKLMRAANAVERRLTPTISASGLTFSQFGVLEALHHIGPLCQRDLSEKLLLSGGNITMVVNNLEKQGLVVRLRTGNDKRYSTVHLTWRGTQMIKEIFPKHLKEVVK 372
M T Y+GS +EVS+LN +IKL R +V L+PT+S +GLT SQFG++E+++H+GP+CQ++L+ K+L SGGNIT+VV+NL KQG V R+R+ D+RYSTVHLT G + I +FPK ++++V+
Sbjct: 1 MGTKYKGSPKEVSALNIFIKLSRCVESVMSELSPTLSKAGLTVSQFGIMESIYHLGPMCQKELASKILKSGGNITLVVDNLAKQGYVKRIRSEQDRRYSTVHLTAAGRRKISALFPKIVEKIVE 124 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13465.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13465.1.1 >prot_P-wetherbeei_contig13465.1.1 ID=prot_P-wetherbeei_contig13465.1.1|Name=mRNA_P-wetherbeei_contig13465.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=128bp MPTHYQGSDEEVSSLNAYIKLMRAANAVERRLTPTISASGLTFSQFGVLEback to top mRNA from alignment at P-wetherbeei_contig13465:2..385- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13465.1.1 ID=mRNA_P-wetherbeei_contig13465.1.1|Name=mRNA_P-wetherbeei_contig13465.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=384bp|location=Sequence derived from alignment at P-wetherbeei_contig13465:2..385- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13465:2..385- >mRNA_P-wetherbeei_contig13465.1.1 ID=mRNA_P-wetherbeei_contig13465.1.1|Name=mRNA_P-wetherbeei_contig13465.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=384bp|location=Sequence derived from alignment at P-wetherbeei_contig13465:2..385- (Phaeothamnion wetherbeei SAG_119_79)back to top |