mRNA_P-wetherbeei_contig13460.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13460.3.1 vs. uniprot
Match: A0A660YXY5_9BACT (YIP1 family protein n=1 Tax=Ignavibacteriae bacterium TaxID=2026749 RepID=A0A660YXY5_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 1.490e-13 Identity = 51/166 (30.72%), Postives = 91/166 (54.82%), Query Frame = 1
Query: 19 RAVRLTAAPENEWRAIRNEAPRAGSVLALFVLPLSLIPAASWSLGLLLYGNDAGGSHTELDSIQIVRGGLVAYLGMVLSIGLCAASINIVAPLFACRRDWPRALQVAAYSASPVLIAGLVLLVPNLAYVLILPFFHSLYLQYAGLQHVLGVRERDAAEYVALSSML 516
RA + +P+ EW A+ NE P +L +VLPL+LIP + +G +G T + V GLV L +++ L A I+ +AP F ++++ +ALQ+ AYS +PV IAG++ ++P++ ++ L + L+L Y G+ ++ E Y+ +S ++
Sbjct: 6 RAKNIMLSPKTEWEAVANEEPNVQQILVSYVLPLALIPTVAIIIG---WGVIGVWGFTSFNYGIAV--GLVQLLNAFIAVLLTAFVIDALAPSFGSQKNYGKALQLVAYSMTPVWIAGILNVIPSIGWLGSLIGLYGLFLLYLGITPMMKTPEDKRVGYLIVSIII 166
BLAST of mRNA_P-wetherbeei_contig13460.3.1 vs. uniprot
Match: A0A7Y2TBP5_9BACT (DUF1282 family protein n=1 Tax=Ignavibacteriaceae bacterium TaxID=2651163 RepID=A0A7Y2TBP5_9BACT) HSP 1 Score: 70.9 bits (172), Expect = 8.290e-12 Identity = 51/166 (30.72%), Postives = 87/166 (52.41%), Query Frame = 1
Query: 19 RAVRLTAAPENEWRAIRNEAPRAGSVLALFVLPLSLIPAASWSLGLLLYGNDAGGSHTELDSIQIVRGGLVAYLGMVLSIGLCAASINIVAPLFACRRDWPRALQVAAYSASPVLIAGLVLLVPNLAYVLILPFFHSLYLQYAGLQHVLGVRERDAAEYVALSSML 516
RA + P++EW + NE P +L +VLPL+LIPA + +G + G S T + GLV + LS+ + A I+ +A F +++ RA+Q+ AYS +PV IAG++ + P + ++ L + L+L Y GL ++ E Y+ +S ++
Sbjct: 6 RAKNIIIKPDDEWAVVANEEPNIQQILLGYVLPLALIPAIAIIIGWGVVGTFGFTSFT-----YGIAMGLVQLINAFLSVLIAAFVIDALAGSFGSQKNMGRAVQLVAYSMTPVWIAGILNIFPTIGWLGGLIGLYGLFLMYKGLAPMMKTPEDKKVGYLIVSIII 166
BLAST of mRNA_P-wetherbeei_contig13460.3.1 vs. uniprot
Match: UPI0019AE3A03 (YIP1 family protein n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=UPI0019AE3A03) HSP 1 Score: 71.6 bits (174), Expect = 9.840e-12 Identity = 60/184 (32.61%), Postives = 93/184 (50.54%), Query Frame = 1
Query: 19 RAVRLTAAPENEWRAIRNEAPRAGSVLALFVLPLSLIPAASWSLGLLLYGNDAGGSHTELDSIQIVRGGLVAYLGMVLSIGLCAASINIVAPLFACRRDWPRALQVAAYSASPVLIAGLVLLVPNLAYVLILPFFHSLYLQYAGLQHVLGVRERDAAEYVAL----SSMLFLGISTALGAVGMW 558
R L +P EW I E R G + +V ++ IP+A+ + + L+G H L ++ G V Y +LS+ A IN VAP F RRD+ RAL+VAAY+ +P + GL+ + P L V +L + +YL + GL ++ E+ A Y+A+ S++LF+ TA W
Sbjct: 16 RLANLLRSPSAEWDQIDQEPTRLGYLNLGYVGLVAAIPSAAKLVLIQLFG------HGFLPLKPMIAGAAVQYALTLLSVFALALVINGVAPSFDGRRDFVRALKVAAYACTPGWLFGLLGVFPLLGIVGVLANLYGVYLLFVGLPKLMKSAEQKAFGYMAVTTICSAVLFVATGTATNLTTGW 193
BLAST of mRNA_P-wetherbeei_contig13460.3.1 vs. uniprot
Match: A0A098BX55_9BACT (Putative membrane protein n=7 Tax=Bacteria TaxID=2 RepID=A0A098BX55_9BACT) HSP 1 Score: 70.1 bits (170), Expect = 1.530e-11 Identity = 50/172 (29.07%), Postives = 85/172 (49.42%), Query Frame = 1
Query: 43 PENEWRAIRNEAPRAGSVLALFVLPLSLIPAASWSLGLLLYGNDAGGSHTELDSIQIVRGGLVAYLGMVLSIGLCAASINIVAPL---FACRRDWPRALQVAAYSASPVLIAGLVLLVPNLAYVLILPFFHSLYLQYAGLQHVLGVRERDAAEYVALSSMLFLGISTALGAV 549
P+ EW I + VL +++PL+LIP + +G L+ + G H+ + I A +V ++G S I+A L F ++ R+ + AYS +P+ +AG++LL+PNL+ V L + LYL Y GL ++ E + Y +S + + +S L V
Sbjct: 14 PKTEWEVISEKNDTHSKVLVSYLIPLALIPTIAGFIGFGLFRFNLMGLHSSFIGLGIRH----AVTSLVSTLGGAYLSAWIIANLADKFGSTNNFDRSFSLVAYSYTPMCVAGILLLLPNLSVVAALCGLYGLYLLYLGLAPMMSTPEEKKSTYFIVSLLCVIVVSAILSTV 181
BLAST of mRNA_P-wetherbeei_contig13460.3.1 vs. uniprot
Match: UPI00140ADE8A (YIP1 family protein n=1 Tax=Marinobacter salicampi TaxID=435907 RepID=UPI00140ADE8A) HSP 1 Score: 67.0 bits (162), Expect = 2.420e-10 Identity = 51/181 (28.18%), Postives = 89/181 (49.17%), Query Frame = 1
Query: 43 PENEWRAIRNEAPRAGSVLALFVLPLSLIPAASWSLGLLLYGNDAGGSHTELDSIQIVRGGLVAYLGMVLSIGLCAASINIVAPLFACRRDWPR--ALQVAAYSASPVLIAGLVLLVP----NLAYVLILPFFHSLYLQYAGLQHVLGVRERDAAEYVA--LSSMLFLGISTALGAVGMWA 561
P+ EW +IR E V +VL L+ I + +G + G + I ++ ++ Y+ +++ + +IN +A F + + R A+ +AAYS +P+ +AG LL P N A V +L + YL Y GL V+G+ AA Y L+ L + ++T +G+V +W+
Sbjct: 13 PDQEWASIRREHETPRRVYVAYVLVLAAIGPICGYISTAYFGWNVGDRVIKFTEISALQLSVLTYIAILVGVFALGYAINWMAKTFGAKEEVSRSNAIALAAYSCTPLFLAGFALLYPVPWFN-ALVFLLAALYGAYLMYDGLPIVMGIPRAQAAMYAGALLTVALVILVATRVGSVLLWS 192
BLAST of mRNA_P-wetherbeei_contig13460.3.1 vs. uniprot
Match: A0A1I0B449_9GAMM (Yip1 domain-containing protein n=3 Tax=Marinobacter TaxID=2742 RepID=A0A1I0B449_9GAMM) HSP 1 Score: 66.6 bits (161), Expect = 3.310e-10 Identity = 54/185 (29.19%), Postives = 92/185 (49.73%), Query Frame = 1
Query: 10 ALLRAVRLTAAPENEWRAIRNEAPRAGSVLALFVLPLSLIPAASWSLGLLLYGNDAGGSH----TELDSIQIVRGGLVAYLGMVLSIGLCAASINIVAPLFACRRDWPRALQVAAYSASPVLIAGLVLLVPNL---AYVLILPFFHSLYLQYAGLQHVLGVRERDAAEYVALSSMLFLGISTALG 543
+L V L P+ EW AIRNE+ + +L L+LIPAA+ G G GGS T ++Q+ +AY M+ I + I+ A + + PR + +AAY+A+P+ + G++ + PN+ V I +++YL Y GL ++ + E ++ SS+L +G+ +G
Sbjct: 2 SLSHTVGLLTHPDEEWEAIRNESESVSKLYFGHILLLALIPAAAAFYGTTQVGWQVGGSQVIKLTMGSALQLCA---LAYFAMLAGIYIIGKFIDFFAATYDVKETTPRGVTLAAYTATPIFLLGVIAVYPNIWVNMAVGIAAIAYAVYLLYQGLPILMKIPEERG--FMFASSVLTVGLVMFVG 181
BLAST of mRNA_P-wetherbeei_contig13460.3.1 vs. uniprot
Match: A0A645AIL1_9ZZZZ (Yip1 domain-containing protein n=3 Tax=root TaxID=1 RepID=A0A645AIL1_9ZZZZ) HSP 1 Score: 65.9 bits (159), Expect = 5.240e-10 Identity = 51/172 (29.65%), Postives = 85/172 (49.42%), Query Frame = 1
Query: 43 PENEWRAIRNEAPRAGSVLALFVLPLSLIPAASWSLG--LLLYGNDAG-GSHTELDSIQIVRGGLVAYLGMVLSIGLCAASINIVAPLFACRRDWPRALQVAAYSASPVLIAGLVLLVPNLAYVLILPFFHSLYLQYAGLQHVLGVRERDAAEYVALSSMLFLGISTALGAV 549
P+ EW I + VL +++PL+LIP + +G +L YG G G L S GG AYL A I+ +A F + + +A + AYS +P+ +AG++LL P L++V++L + LYL Y GL ++ E + +S + + ++ + AV
Sbjct: 14 PKTEWETISEKNDTHVKVLTAYLIPLALIPTIAGFIGYGILGYGMFVGIGVRYALSSFISTIGG--AYLS--------AWIISFLADKFESDKSFDKAFSLVAYSYTPMCVAGILLLFPQLSFVVMLGGLYGLYLLYLGLTPMMKTPEEKKINFFIVSLLCVVAVTAVVSAV 175
BLAST of mRNA_P-wetherbeei_contig13460.3.1 vs. uniprot
Match: A0A6M8V973_9BACT (DUF1282 family protein n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A6M8V973_9BACT) HSP 1 Score: 65.9 bits (159), Expect = 6.080e-10 Identity = 48/163 (29.45%), Postives = 82/163 (50.31%), Query Frame = 1
Query: 19 RAVRLTAAPENEWRAIRNEAPRAGSVLALFVLPLSLIPAASWSLGLLLYGNDAGGSHTELDSIQIVRG---GLVAYLGMVLSIGLCAASINIVAPLFACRRDWPRALQVAAYSASPVLIAGLVLLVPNLAYVLILPFFHSLYLQYAGLQHVLGVRERDAAEYV 498
RA + P+ EW + E P ++ +VLPL+LIP + +G + G L + G GLV L LS+ + A I+ +A F +++ RA+Q+ AYS +P+ IAG++ ++P + ++ L + L+L Y GL ++ E A Y+
Sbjct: 6 RAKNIIITPKTEWEKVAAEEPNVQQIMVGYVLPLALIPTIASIVGWGVIG--------ILGFTSVTYGIAMGLVQLLNAFLSVLIAAFVIDALAGSFGSAKNFGRAVQLVAYSMTPIWIAGILGILPAIGWLAFLLGLYGLFLLYMGLSPIMKTPEDKKAVYL 160
BLAST of mRNA_P-wetherbeei_contig13460.3.1 vs. uniprot
Match: UPI000BE5786A (YIP1 family protein n=1 Tax=Mangrovitalea sediminis TaxID=1982043 RepID=UPI000BE5786A) HSP 1 Score: 65.9 bits (159), Expect = 6.380e-10 Identity = 48/167 (28.74%), Postives = 90/167 (53.89%), Query Frame = 1
Query: 43 PENEWRAIRNEAPRAGSVLALFVLPLSLIPAASWSLGLLLYGNDAGGSH-TELDSIQIVRGGLVAYLGMVLSIGLCAASINIVAPLFACRRDWPRALQVAAYSASPVLIAGLVLLVPNL---AYVLILPFFHSLYLQYAGLQHVLGV-RERDAAEYVALSSMLFLGI 528
P+ EW AIR E+ G + +L L+LIPAA+ G G G + T+L S ++ L+ Y +++ + + I++ A + R P+ +AAY+A+P+ + G++ + PN+ V ++ +S+YL Y GL ++ + +ER ++ SS+L +G+
Sbjct: 13 PDQEWEAIRRESESVGMLYGKHILLLALIPAAAAYYGTTEVGWQVGNTQVTKLTSASALQLCLLFYAAIIVGVYILGRFIDLFAATYGVREAKPKGFILAAYTATPMFLLGVIAIYPNIWLNMLVGLIAVAYSVYLLYEGLPILMHIPKERG---FMFASSVLTVGL 176
BLAST of mRNA_P-wetherbeei_contig13460.3.1 vs. uniprot
Match: A0A7Y2K5H3_9BACT (DUF1282 family protein n=1 Tax=Ignavibacteriaceae bacterium TaxID=2651163 RepID=A0A7Y2K5H3_9BACT) HSP 1 Score: 65.1 bits (157), Expect = 1.160e-9 Identity = 39/128 (30.47%), Postives = 71/128 (55.47%), Query Frame = 1
Query: 19 RAVRLTAAPENEWRAIRNEAPRAGSVLALFVLPLSLIPAASWSLGLLLYGNDAGGSHTELDSIQIVRGGLVAYLGMVLSIGLCAASINIVAPLFACRRDWPRALQVAAYSASPVLIAGLVLLVPNLAY 402
RA + +P+ EW A+ NE P +L +VLPL+LIPA + +G + G S ++ +V+ L +++ + + I+ +AP F +++ RALQ+ AYS +PV +AG+ ++P + +
Sbjct: 6 RAKNIMLSPKTEWEAVSNEEPNVQQILISYVLPLALIPAVAILIGWGVIGMWGFTSFNYGIAVALVQ-----LLNAFIAVLVTSFVIDALAPSFGSEKNYGRALQLVAYSMTPVWVAGIFNIIPTIGW 128 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13460.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13460.3.1 >prot_P-wetherbeei_contig13460.3.1 ID=prot_P-wetherbeei_contig13460.3.1|Name=mRNA_P-wetherbeei_contig13460.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=191bp MLRALLRAVRLTAAPENEWRAIRNEAPRAGSVLALFVLPLSLIPAASWSLback to top mRNA from alignment at P-wetherbeei_contig13460:678..1250+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13460.3.1 ID=mRNA_P-wetherbeei_contig13460.3.1|Name=mRNA_P-wetherbeei_contig13460.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig13460:678..1250+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13460:678..1250+ >mRNA_P-wetherbeei_contig13460.3.1 ID=mRNA_P-wetherbeei_contig13460.3.1|Name=mRNA_P-wetherbeei_contig13460.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig13460:678..1250+ (Phaeothamnion wetherbeei SAG_119_79)back to top |