mRNA_P-wetherbeei_contig13454.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13454.1.1 vs. uniprot
Match: H3GWZ1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWZ1_PHYRM) HSP 1 Score: 80.1 bits (196), Expect = 1.170e-15 Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 1
Query: 1 REEGVIVSLREGFGFIRCATREGDAFFRLRDVMCNRSGGGGSCEVRFNLTSSDRGDKLRATRVEVVPPGTVWTQHPVATGLAGTV 255
RE G I +L+E FGFI+CA R GDA+FR DVM N EV F++ + ++ D +RATR++++P GT+ + VA GL G +
Sbjct: 628 RETGTINALKEDFGFIKCAERSGDAYFRFSDVMGNSRSFKNGTEVAFDVIADNKSDNIRATRLQILPRGTIKWEDVVADGLEGKI 712
BLAST of mRNA_P-wetherbeei_contig13454.1.1 vs. uniprot
Match: A0A225W3C0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W3C0_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.420e-14 Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 1
Query: 1 REEGVIVSLREGFGFIRCATREGDAFFRLRDVM-CNRSGGGGSCEVRFNLTSSDRGDKLRATRVEVVPPGTVWTQHPVATGLAGTV 255
RE GVI +++E FGFI+CA R GDA+FR DVM +RS G+ EV F++ + ++ D +RATR++++P GT+ + A GL G +
Sbjct: 588 RETGVINAMKEDFGFIKCAERSGDAYFRFSDVMGASRSFNNGT-EVAFDVLADNKSDHIRATRLQILPRGTIKWEDVAAEGLEGKI 672
BLAST of mRNA_P-wetherbeei_contig13454.1.1 vs. uniprot
Match: D0NFB4_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NFB4_PHYIT) HSP 1 Score: 77.0 bits (188), Expect = 1.420e-14 Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 1 REEGVIVSLREGFGFIRCATREGDAFFRLRDVMCNRSGGGGSCEVRFNLTSSDRGDKLRATRVEVVPPGTVWTQHPVATGLAGTV 255
RE GVI +L+E FGFI+CA R GDA+FR DVM EV F++ ++ D +RATR++++P GT+ + A GL G +
Sbjct: 626 RETGVINALKEDFGFIKCAERSGDAYFRFSDVMGTSRSFNNGTEVAFDVLVDNKSDHIRATRLQILPRGTIKWEDVAAEGLEGRI 710
BLAST of mRNA_P-wetherbeei_contig13454.1.1 vs. uniprot
Match: A0A662X4D1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4D1_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 2.660e-14 Identity = 36/85 (42.35%), Postives = 55/85 (64.71%), Query Frame = 1
Query: 1 REEGVIVSLREGFGFIRCATREGDAFFRLRDVMCNRSGGGGSCEVRFNLTSSDRGDKLRATRVEVVPPGTVWTQHPVATGLAGTV 255
RE G+I +++E FGFI+CA R GDA+FR DVM + EV F++ + ++ D +RATR+ ++P GT+ + VA GL G +
Sbjct: 794 RETGMINAMKEDFGFIKCAERAGDAYFRFSDVMGSNRNFRSGTEVAFDVLADNKADHMRATRLVILPQGTIKWEDVVAEGLEGEI 878
BLAST of mRNA_P-wetherbeei_contig13454.1.1 vs. uniprot
Match: A0A329RLV6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RLV6_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 3.610e-14 Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 1
Query: 1 REEGVIVSLREGFGFIRCATREGDAFFRLRDVM-CNRSGGGGSCEVRFNLTSSDRGDKLRATRVEVVPPGTVWTQHPVATGLAGTV 255
RE GVI +++E FGFI+CA R GDA+FR DVM +RS G+ EV F++ ++ D +RATR++++P GT+ + A GL G +
Sbjct: 616 RETGVINAMKEDFGFIKCAERSGDAYFRFSDVMGASRSFNNGT-EVAFDVLVDNKSDHIRATRLQILPRGTIKWEDVAAEGLEGKI 700
BLAST of mRNA_P-wetherbeei_contig13454.1.1 vs. uniprot
Match: A0A3R7K7D7_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K7D7_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 3.620e-14 Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 1 REEGVIVSLREGFGFIRCATREGDAFFRLRDVMCNRSGGGGSCEVRFNLTSSDRGDKLRATRVEVVPPGTVWTQHPVATGLAGTV 255
RE G I ++++ FGFI+CA R GDA+FR DVM + G EV F++ ++ D +RA+R++++P GTV + A GL G +
Sbjct: 548 RETGAINAMKDDFGFIKCAERSGDAYFRFSDVMGSNQNFGSGTEVAFDVAVDNKSDHVRASRLQILPRGTVKWEDVAAEGLEGEI 632
BLAST of mRNA_P-wetherbeei_contig13454.1.1 vs. uniprot
Match: A0A3F2RIS8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RIS8_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 3.640e-14 Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 1 REEGVIVSLREGFGFIRCATREGDAFFRLRDVMCNRSGGGGSCEVRFNLTSSDRGDKLRATRVEVVPPGTVWTQHPVATGLAGTV 255
RE G I ++++ FGFI+CA R GDA+FR DVM + G EV F++ ++ D +RA+R++++P GTV + A GL G V
Sbjct: 649 RETGAINAMKDDFGFIKCAERSGDAYFRFSDVMGSNRNFGSGTEVAFDVAVDNKSDHVRASRLQILPRGTVKWEDVAAEGLEGKV 733
BLAST of mRNA_P-wetherbeei_contig13454.1.1 vs. uniprot
Match: G4Z9V3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z9V3_PHYSP) HSP 1 Score: 74.7 bits (182), Expect = 9.210e-14 Identity = 40/86 (46.51%), Postives = 57/86 (66.28%), Query Frame = 1
Query: 1 REEGVIVSLREGFGFIRCATREGDAFFRLRDVM-CNRSGGGGSCEVRFNLTSSDRGDKLRATRVEVVPPGTVWTQHPVATGLAGTV 255
RE G I +++E FGFI+CA R GDA+FR DVM +RS G+ EV F++ ++ D +RATR++++P GTV + A GL G V
Sbjct: 626 RETGTINAMKEDFGFIKCAERSGDAYFRFSDVMGISRSYNNGT-EVAFDVQVDNKSDHIRATRLQILPRGTVKWEDVAAEGLEGKV 710
BLAST of mRNA_P-wetherbeei_contig13454.1.1 vs. uniprot
Match: A0A3M6V819_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V819_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 9.220e-14 Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 1
Query: 1 REEGVIVSLREGFGFIRCATREGDAFFRLRDVMCNRSGGGGSCEVRFNLTSSDRGDKLRATRVEVVPPGTVWTQHPVATGLAGTV 255
RE G+I +++E FGFI+CA R GDA+FR DVM + EV F++ + D +RA R++++P GTV ++ GL G +
Sbjct: 665 RETGIINAMKEDFGFIKCAERSGDAYFRFSDVMGTQRSFNNGTEVAFDVIVDSKSDHIRAARLQILPRGTVQWEYVAGEGLEGKI 749
BLAST of mRNA_P-wetherbeei_contig13454.1.1 vs. uniprot
Match: W2QJD1_PHYPN (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QJD1_PHYPN) HSP 1 Score: 73.9 bits (180), Expect = 1.720e-13 Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 1
Query: 1 REEGVIVSLREGFGFIRCATREGDAFFRLRDVMCNRSGGGGSCEVRFNLTSSDRGDKLRATRVEVVPPGTVWTQHPVATGLAGTV 255
RE GVI +++E FGFI+CA R GDA+FR DVM EV F++ ++ D +RATR++++P GTV + A L G +
Sbjct: 608 RETGVINAMKEDFGFIKCAERSGDAYFRFSDVMGTSRSFNNGTEVAFDVLVDNKSDHIRATRLQILPRGTVKWEDVAAEDLEGQI 692 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13454.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13454.1.1 >prot_P-wetherbeei_contig13454.1.1 ID=prot_P-wetherbeei_contig13454.1.1|Name=mRNA_P-wetherbeei_contig13454.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=85bp REEGVIVSLREGFGFIRCATREGDAFFRLRDVMCNRSGGGGSCEVRFNLTback to top mRNA from alignment at P-wetherbeei_contig13454:991..1347- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13454.1.1 ID=mRNA_P-wetherbeei_contig13454.1.1|Name=mRNA_P-wetherbeei_contig13454.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig13454:991..1347- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13454:991..1347- >mRNA_P-wetherbeei_contig13454.1.1 ID=mRNA_P-wetherbeei_contig13454.1.1|Name=mRNA_P-wetherbeei_contig13454.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig13454:991..1347- (Phaeothamnion wetherbeei SAG_119_79)back to top |