mRNA_P-wetherbeei_contig1345.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1345.1.1
Unique NamemRNA_P-wetherbeei_contig1345.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1345.1.1 vs. uniprot
Match: D7FN53_ECTSI (PTB (HnRNP) homolog family member (Ptb-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN53_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 1.450e-35
Identity = 94/231 (40.69%), Postives = 127/231 (54.98%), Query Frame = 3 
Query: 1110 AWVNAGVPGQHSVVRILGVDD-SVTPEALCQLFGLYGDVMKVKVTRGDRGMALVQLRHAVQADKARHFLDGALLAGRRLRADVSTQAAVKDRSAADFARLHQVHRFAGVPSPEDPRYLEHLCAPCATLVVDNLPPDCPSEELSALLAPHGHVSSLDVDAQTN------------------------QAVVQMDC------VQSAVHALIMTHNSSLKGHVLRVLFFNRSFH 1709
            AW  AG   +  +V +  VD   V+P A C LFGLYGDVMKVK+    RGMALVQ+R+ VQA  A+  LD   L+G  +    S+Q  + D +A DF+ +  +HRF+  P+PED RY + L  PC TLVVDN+ PD  +E ++++ A HG VSS+D+D                            QA+V M+        ++AVHALIMTHN +L    LRV F +   H
Sbjct:  689 AWAAAGPVARSPIVMVRHVDTLEVSPGAFCHLFGLYGDVMKVKLV-ASRGMALVQMRYPVQAANAQRLLDQTPLSGMTIEVKPSSQWTINDPTATDFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGAVSSVDLDTHAKAPLDTASALASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSGEHH 918
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BLAST of mRNA_P-wetherbeei_contig1345.1.1 vs. uniprot
Match: A0A6H5KZ42_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ42_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 3.260e-33
Identity = 94/239 (39.33%), Postives = 127/239 (53.14%), Query Frame = 3 
Query: 1110 AWVNAGVPGQHSVVRILGVDD-SVTPEALCQLFGLYGDVMKVKVTRGDRGMALVQLRHAVQADKARHFLDGALLAGRRLRADVSTQAAVKDRSAADFARLHQVHR--------FAGVPSPEDPRYLEHLCAPCATLVVDNLPPDCPSEELSALLAPHGHVSSLDVDAQTN------------------------QAVVQMDC------VQSAVHALIMTHNSSLKGHVLRVLFFNRSFH 1709
            AW  AG   +  +V +  VD   V+P A C LFGLYGDVMKVK+    RGMALVQ+R+ VQA  A+  LD   L+G  L    S+Q  + D +A DF+ +  +HR        F+  P+P+D RY + L  PC TLVVDN+ PD  +E ++++ A HG VSS+D+D                            QA+V M+        ++AVHALIMTHN +L    LRV F +   H
Sbjct:  907 AWAAAGPVARSPIVMVRHVDTLEVSPGAFCHLFGLYGDVMKVKIV-ASRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTATDFSGVQGLHRQSCWDRFAFSTTPTPDDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGPVSSVDLDTHAKAPLDTISARASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSGKHH 1144
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BLAST of mRNA_P-wetherbeei_contig1345.1.1 vs. uniprot
Match: A0A7S3UWL0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL0_HETAK)

HSP 1 Score: 112 bits (279), Expect = 2.270e-22
Identity = 81/186 (43.55%), Postives = 105/186 (56.45%), Query Frame = 3 
Query: 1134 GQHSVVRILGVDDS-VTPEALCQLFGLYGDVMKVKVTRGDRGMALVQLRHAVQADKARHFLDGALLAGRRLRADVSTQAAVKDRSAADFARLHQVHRFAGVPSPEDPRYLEHLCAPCATLVVDNLPPDCPSEELSALLAPHGHVSSLDVDAQTNQAVVQMDCVQSAVHALIMTHNSSLKGHVLRVL 1688
            G   +V +   D + V  E L  LFGLYGDV+KVKV    +  ALVQ  H +QA  A  FL+   LAG+ LR   ST   +KD+SA+DF+ +  VHR+ GV  P DP Y  +L  P   L V N+  +   E L AL    G VSS+ + A    A V+M  VQ+AVHALIMTH+  L+G    +L
Sbjct:  309 GGSPLVLVQNADPAHVRGEHLAALFGLYGDVLKVKVMT-HKACALVQYAHPLQAANAMAFLNDTPLAGQTLRCVRSTSFEIKDQSASDFSAV-PVHRYRGVERPLDPAYQRNLVPPGPRLAVANVG-EATEEALRALYGRFGAVSSVAL-AGDGTATVEMSDVQTAVHALIMTHHHLLEGAAAPLL 490
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BLAST of mRNA_P-wetherbeei_contig1345.1.1 vs. uniprot
Match: A0A7S2WBW3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBW3_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.260e-20
Identity = 76/204 (37.25%), Postives = 105/204 (51.47%), Query Frame = 3 
Query: 1104 AEAWVNAGVP------GQHSVVRILGVDDSV-TPEALCQLFGLYGDVMKVKVTRGDRGMALVQLRHAVQADKARHFLDGALLAGRRLRADVSTQAAVKDRSAADFARLHQVHRFAGVPSPEDPRYLEHLCAPCATL-VVDNLPPDCPSEELSALLAPHGHVSSLDVDAQTNQAVVQMDCVQSAVHALIMTHNSSLKGHVLRVLF 1691
            A+ W+ A +P      G   V+ +  VD +  T + L  LFG+YGDV+KVK+    R  AL+Q  +   A  AR  LDG  L GR L    S+Q  + D SAAD      + RF+   SP DP Y +HL  P  TL  + +   + P EEL  LLA    V+ +   +   + +VQ+  V++AV  +IMTH   L G VL V F
Sbjct:   53 AQTWLEA-LPEANTEDGCTRVLHVTNVDTNYCTTDMLAILFGVYGDVIKVKIL-SSREAALIQFAYPAMAFFARQHLDGCPLLGRNLAIAYSSQVGINDPSAADLTSRPTLRRFSATTSPSDPMYQDHLVPPTNTLKFLFHENKNAPDEELKKLLAKGCEVTEMKRISPA-EVLVQVASVEAAVSGIIMTHGQLLGGVVLSVCF 253
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BLAST of mRNA_P-wetherbeei_contig1345.1.1 vs. uniprot
Match: I2CQY0_NANGC (Polypyrimidine tract binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQY0_NANGC)

HSP 1 Score: 95.5 bits (236), Expect = 9.670e-18
Identity = 69/196 (35.20%), Postives = 104/196 (53.06%), Query Frame = 3 
Query: 1119 NAGVPGQHSVVRIL-GVD-DSVTPEALCQLFGLYGDVMKVKVTRGDRGMALVQLRHAVQADKARHFLDGALLAGRRLRADVSTQAAVKDRSAADFARLHQVHRFAGVPSPEDPRYLEHLCAPCATLVVDNLPPDCPSEELSALLAPHGHV---SSLDVDAQTNQAVVQMDCVQSAVHALIMTHNSSLKGHVLRVLF 1691
            +A +PG  + V I+ G++ + V  EAL  LFGLYGDV +VK+   ++  A+V++   VQA  A+  LD + L GR ++   STQ  ++D  A DF     +H +    SP  P YL +L  P A L + N+  D       +LL     V   + L   + T+ A+V    V++AVHA I+ HN  + G +L V F
Sbjct:  124 SARLPGTDTCVLIVQGLNMEMVGAEALAALFGLYGDVRRVKMMP-EQDSAIVEMERPVQAYVAKWLLDASPLGGRVIKVKSSTQDTIRDVQAQDFTAF-PLHGYRQYASPRHPSYLANLVEPTAVLRIANIDWDTSEITFRSLLTQQEGVMGVTRLLPSSHTSPALVSFQSVEAAVHACILLHNQEVDGRLLYVTF 317
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BLAST of mRNA_P-wetherbeei_contig1345.1.1 vs. uniprot
Match: A0A7K6N6C3_PEDTO (PTBP3 protein (Fragment) n=1 Tax=Pedionomus torquatus TaxID=227192 RepID=A0A7K6N6C3_PEDTO)

HSP 1 Score: 91.3 bits (225), Expect = 1.180e-15
Identity = 69/200 (34.50%), Postives = 105/200 (52.50%), Query Frame = 3 
Query: 1125 GVPGQHSVVRILGVD-DSVTPEALCQLFGLYGDVMKVKVTRGDRGMALVQLRHAVQADKARHFLDGALLAGRRLRADVSTQAAV-------KDRSAADFARLHQVHRFAGVPSPEDPRYLEHLCAPCATLVVDNLPPDCPSEELSALLAPHGHVSSLD--VDAQTNQAVVQMDCVQSAVHALIMTHNSSL-KGHVLRVLF 1691
            GVPG +SV+ +  ++ +++TP+ L  LFG+YGDV +VK+    +G ALVQ+  A QA  A ++L+G  L G+ LR   S   AV       KD+          +HRF    S    +  +++  P ATL + N+PP    ++L  L +  G        +      A++Q+ CV+ A+HALI  HN  L + H LRV F
Sbjct:  283 GVPG-NSVLLVSNLNPEAITPDGLFILFGVYGDVHRVKIMFKKKGNALVQMADATQAQLAINYLNGQRLYGKVLRTTFSKHHAVQLPCGRQKDQGLTKDYSNSPLHRFRRPGS----KNFQNIFPPSATLHLANIPPSVTVDDLKKLFSNVGSTVKAFRFLQKDCRMALIQLGCVEEALHALIELHNYDLGENHHLRVSF 477
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BLAST of mRNA_P-wetherbeei_contig1345.1.1 vs. uniprot
Match: A0A3B3BKS6_ORYME (Polypyrimidine tract-binding protein 1-like n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A3B3BKS6_ORYME)

HSP 1 Score: 87.4 bits (215), Expect = 1.410e-14
Identity = 68/199 (34.17%), Postives = 97/199 (48.74%), Query Frame = 3 
Query: 1128 VPGQHSVVRILGVDDSV-TPEALCQLFGLYGDVMKVKVTRGDRGMALVQLRHAVQADKARHFLDGALLAGRRLRADVSTQAAVK-------DRSAADFARLHQVHRFAGVPSPEDPRYLEHLCAPCATLVVDNLPPDCPSEELSALLAPHGHVSSLDVDAQTNQ--AVVQMDCVQSAVHALIMTHNSSL-KGHVLRVLF 1691
            +P  HSV+ +  ++  V TP  L  LFG+YGDVM+VK+    +  ALVQ+  + QA  A   L+G  L GR LR  +S   +V+       D+          +HRF     P    Y  ++  P ATL + N+PP    E+L  L +  G V       Q +   A++QM  V+ A+  LI  HN  L + H LRV F
Sbjct:  224 IPAGHSVLLVSNLNPEVITPHCLFILFGVYGDVMRVKILFNKKENALVQMSDSTQAQLAMSHLNGQRLHGRPLRITLSKHTSVQLPREGHEDQGLTKDYSSSPLHRFK---KPGSKNY-SNIFPPSATLHLSNIPPSVVEEDLKMLFSSSGAVVKAFKFFQKDHKMALIQMGSVEEAIECLIQLHNHDLGENHHLRVSF 418
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BLAST of mRNA_P-wetherbeei_contig1345.1.1 vs. uniprot
Match: A0A3B3H543_ORYLA (Polypyrimidine tract-binding protein 1 n=16 Tax=Oryzias TaxID=8089 RepID=A0A3B3H543_ORYLA)

HSP 1 Score: 88.2 bits (217), Expect = 1.590e-14
Identity = 68/199 (34.17%), Postives = 98/199 (49.25%), Query Frame = 3 
Query: 1128 VPGQHSVVRILGVD-DSVTPEALCQLFGLYGDVMKVKVTRGDRGMALVQLRHAVQADKARHFLDGALLAGRRLRADVSTQAAVK-------DRSAADFARLHQVHRFAGVPSPEDPRYLEHLCAPCATLVVDNLPPDCPSEELSALLAPHGHVSSLDVDAQTNQ--AVVQMDCVQSAVHALIMTHNSSL-KGHVLRVLF 1691
            +P  HSVV +  ++ + VTP  L  LFG+YGDVM+VK+    +  ALVQ+  + QA  A   L+G  L GR LR  +S   +V+       D+          +HRF     P    Y  ++  P ATL + N+PP    ++L  L +  G V       Q +   A++QM  V+ A+  LI  HN  L + H LRV F
Sbjct:  363 IPAGHSVVLVSNLNAERVTPHCLFILFGVYGDVMRVKILFNKKENALVQMSDSTQAQLAMSHLNGQRLHGRPLRITLSKHTSVQLPREGHEDQGLTKDYSSSPLHRFK---KPGSKNY-SNIFPPSATLHLSNIPPSVVEDDLKMLFSSSGAVVKAFKFFQKDHKMALIQMGSVEEAIECLIQLHNHDLGENHHLRVSF 557
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BLAST of mRNA_P-wetherbeei_contig1345.1.1 vs. uniprot
Match: W5M0R2_LEPOC (Polypyrimidine tract-binding protein 1 n=25 Tax=Actinopterygii TaxID=7898 RepID=W5M0R2_LEPOC)

HSP 1 Score: 87.8 bits (216), Expect = 2.140e-14
Identity = 67/200 (33.50%), Postives = 100/200 (50.00%), Query Frame = 3 
Query: 1125 GVPGQHSVVRILGVD-DSVTPEALCQLFGLYGDVMKVKVTRGDRGMALVQLRHAVQADKARHFLDGALLAGRRLRADVSTQAAVK-------DRSAADFARLHQVHRFAGVPSPEDPRYLEHLCAPCATLVVDNLPPDCPSEELSALLAPHGHVSSLDVDAQTNQ--AVVQMDCVQSAVHALIMTHNSSL-KGHVLRVLF 1691
            G+ G HSV+ +  ++ + VTP+ L  LFG+YGDVM+VK+    +  ALVQ+    QA  A   L+G  L G+ +R  +S    V+       D+          +HRF     P    Y +++  P ATL + N+PP    ++L  L A  G V       Q ++  A++QM  V+ A+  LI  HN  L + H LRV F
Sbjct:  368 GLAGGHSVLLVSNLNAERVTPQCLFILFGVYGDVMRVKILFNKKENALVQMADGTQAQLAMSHLNGQKLHGKAIRVTLSKHTTVQLPREGQEDQGLTKDFSSSPLHRFK---KPGSKNY-QNIFPPSATLHLSNIPPSVVEDDLKMLFASSGAVVKAFKFFQKDRKMALIQMGSVEEAIQCLIEYHNHDLGENHHLRVSF 563
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BLAST of mRNA_P-wetherbeei_contig1345.1.1 vs. uniprot
Match: A0A091VSQ8_NIPNI (Polypyrimidine tract-binding protein 3 (Fragment) n=3 Tax=Nipponia nippon TaxID=128390 RepID=A0A091VSQ8_NIPNI)

HSP 1 Score: 87.4 bits (215), Expect = 2.300e-14
Identity = 72/201 (35.82%), Postives = 106/201 (52.74%), Query Frame = 3 
Query: 1122 AGVPGQHSVVRILGVD-DSVTPEALCQLFGLYGDVMKVKVTRGDRGMALVQLRHAVQADKARHFLDGALLAGRRLRADVSTQAAVK-DRSAADFARLHQ------VHRFAGVPSPEDPRYLEHLCAPCATLVVDNLPPDCPSEELSALLAPHGHVSSLDVDAQTN--QAVVQMDCVQSAVHALIMTHNSSL-KGHVLRVLF 1691
            +GVPG +SV+ +  ++ +++TP  L  LFG+YGDV +VK+    +  ALVQ+  A QA  A   L+G  L GR LRA +S    V+  R   +   L +      +HRF    S    +  +++  P ATL + N+PP    ++L  L A  G         QT+   A++Q+  V+  VHALIM HN  L + H LRV F
Sbjct:  308 SGVPG-NSVLLVSNLNPEAITPHGLFILFGVYGDVHRVKIMFKKKENALVQMADATQAQLAISNLNGQRLYGRVLRATLSKHQTVQLPREGQEGQGLTKDYSNSPLHRFKKPGS----KNFQNIFPPSATLHLSNIPPSVSVDDLKKLFASTGSTVKAFRFFQTDCKMALIQLGSVEEGVHALIMLHNHDLGENHHLRVSF 503
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1345.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN53_ECTSI1.450e-3540.69PTB (HnRNP) homolog family member (Ptb-1) n=1 Tax=... [more]
A0A6H5KZ42_9PHAE3.260e-3339.33RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S3UWL0_HETAK2.270e-2243.55Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2WBW3_9STRA1.260e-2037.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
I2CQY0_NANGC9.670e-1835.20Polypyrimidine tract binding protein n=1 Tax=Nanno... [more]
A0A7K6N6C3_PEDTO1.180e-1534.50PTBP3 protein (Fragment) n=1 Tax=Pedionomus torqua... [more]
A0A3B3BKS6_ORYME1.410e-1434.17Polypyrimidine tract-binding protein 1-like n=1 Ta... [more]
A0A3B3H543_ORYLA1.590e-1434.17Polypyrimidine tract-binding protein 1 n=16 Tax=Or... [more]
W5M0R2_LEPOC2.140e-1433.50Polypyrimidine tract-binding protein 1 n=25 Tax=Ac... [more]
A0A091VSQ8_NIPNI2.300e-1435.82Polypyrimidine tract-binding protein 3 (Fragment) ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1345contigP-wetherbeei_contig1345:3110..6967 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FN53
PFAMsRRM_1,RRM_5
Model size2065
Max annot lvl2759|Eukaryota
KEGG koko:K13218,ko:K14948
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.43e-37
EggNOG OGsKOG1190@1|root,KOG1190@2759|Eukaryota
Ec32 ortholog descriptionhuman PTB (hnRNP) homolog family member (ptb-1)
Ec32 orthologEc-06_008430.2
Descriptionregulation of secretory granule organization
Cds size1455
COG categoryO
BRITEko00000,ko03019,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1345.1.1prot_P-wetherbeei_contig1345.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1345 3457..6704 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185985.8979692-UTR-P-wetherbeei_contig1345:3109..34561683185985.8979692-UTR-P-wetherbeei_contig1345:3109..3456Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1345 3110..3456 -
1683185985.9489899-UTR-P-wetherbeei_contig1345:6704..69671683185985.9489899-UTR-P-wetherbeei_contig1345:6704..6967Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1345 6705..6967 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185985.907143-CDS-P-wetherbeei_contig1345:3456..35791683185985.907143-CDS-P-wetherbeei_contig1345:3456..3579Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1345 3457..3579 -
1683185985.9141645-CDS-P-wetherbeei_contig1345:3899..40821683185985.9141645-CDS-P-wetherbeei_contig1345:3899..4082Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1345 3900..4082 -
1683185985.921663-CDS-P-wetherbeei_contig1345:4552..47351683185985.921663-CDS-P-wetherbeei_contig1345:4552..4735Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1345 4553..4735 -
1683185985.9299476-CDS-P-wetherbeei_contig1345:5192..58021683185985.9299476-CDS-P-wetherbeei_contig1345:5192..5802Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1345 5193..5802 -
1683185985.9394739-CDS-P-wetherbeei_contig1345:6348..67041683185985.9394739-CDS-P-wetherbeei_contig1345:6348..6704Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1345 6349..6704 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1345.1.1

>prot_P-wetherbeei_contig1345.1.1 ID=prot_P-wetherbeei_contig1345.1.1|Name=mRNA_P-wetherbeei_contig1345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=485bp
MGCFGGVGVTQQDEPPPAPAFQEAQPSYGYAGMPSMAPLPYASYGGAGGG
THAAGDDGGYAGASSGSCGGKYGAANDVTGYVEGPRGRGGYPVMPAPGAE
GAGLPPRWIGLANVPPPDSEGVFGPSVLLYPPQFEDFVAATAAKGAAILA
ESTETDHLADTTAEVSVRDNDDAAAASPPTSAAAIAAASAASASEARAEV
ELAEPAERSGGRATVASETDPPEAEGEVAVRTAVASVAAGAGSSDGKEEM
EADPELEPGLDSVGAAMSSSQADSDAEADAAEAWVNAGVPGQHSVVRILG
VDDSVTPEALCQLFGLYGDVMKVKVTRGDRGMALVQLRHAVQADKARHFL
DGALLAGRRLRADVSTQAAVKDRSAADFARLHQVHRFAGVPSPEDPRYLE
HLCAPCATLVVDNLPPDCPSEELSALLAPHGHVSSLDVDAQTNQAVVQMD
CVQSAVHALIMTHNSSLKGHVLRVLFFNRSFHGR*
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mRNA from alignment at P-wetherbeei_contig1345:3110..6967-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1345.1.1 ID=mRNA_P-wetherbeei_contig1345.1.1|Name=mRNA_P-wetherbeei_contig1345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3858bp|location=Sequence derived from alignment at P-wetherbeei_contig1345:3110..6967- (Phaeothamnion wetherbeei SAG_119_79)
AGCTCCTGCAGCAGCAGCAATATCAACAGCAGCAGCTGGTGCTAGTGCCC
GCGCCAGCACCGGAAGGCAACGCGCCGTCGCAGGGCGGTCACTATCCGCC
AAAGCTCTATGGCGGGTCGGCGGCGGCGGCCGGCGGGCAGTGGCCGCCGA
GAGTGTCCGGAGCAGCTGGCGTCAGCGGCAGCGGCGGCAGCAGCTGCGGC
AGCAGCAGCGGGTATAACAACGGTGGGGGCGGCTTTCGCGGCCTAACGGC
GACGGTGGCGGCGATGGGATGTTTTGGCGGCGTTGGCGTTACGCAACAAG
ATGAACCGCCGCCGGCGCCGGCGTTCCAGGAAGCGCAGCCGTCGTACGGC
TACGCGGGCATGCCGTCGATGGCACCTCTGCCATATGCAAGCTACGGCGG
CGCCGGCGGTGGCACTCACGCAGCCGGCGACGATGGCGGCTACGCTGGGG
CGAGCAGCGGCAGCTGCGGCGGAAAATACGGTGCAGCAAATGACGTAACG
GGCTATGTCGAAGGCCCTCGCGGGCGGGGCGGCTACCCCGTGATGCCTGC
GCCGGGGGCGGAAGGAGCGGGCCTCCCGCCGCGCTGGATCGGATTGGCCA
ACGTTCCACCACCAGACAGGTACCGAGAGACGGCGCCGCGGGGTACCTTT
GATGTTCATTGGTGTCAACCAGGGAAAGCCTGCCGGTTGGCATGTTTTCG
TTCACCTGTTGCAGAACGGCGGCGGGACAATCTTTGACTTGCCCCTACCT
CTGTTCCCCAGGTCCCTTAAATTACCCTTCCGCTTGGGGGGCTCCCAAAG
CCTCCCAATAGCGGCTCCCACCAGCGCCCTTTCCCGTTCGGCTCCCACCA
GCGCCCTTTCCCGTTAAACGCCTGCCCTGCTCTTCTTTACGGGCTCCCCA
AACCTGCCCGTGTCCCTGCTTTTCCGTTCTTCTTCCCTTCTGGTTTCTCT
TCTCCCTGTTTTGTTGCCTGGCGTTCCCCCCGCTGGCATGCCCTATCACC
CTATCCCGCTCTTGCGCCGGACCCTGTGGCGATTCCACGGATGATTGGTT
GCACCCGACGGACCAACGTCGATGCGGCCGACCGGCGGCGCCACGATCCC
CCAATTGTGTGCGCCGTCCATCCATCCGGTAACACTTCATTGCGGCGGGC
CGACCGACCTTGCAGCGAGGGCGTTTTTGGCCCGAGCGTGCTCCTTTACC
CACCTCAATTTGAGGACTTTGTGGCCGCCACGGCCGCCAAGGGCGCCGCC
ATTCTTGCCGAATCCACCGAAACGGATCACCTCGCCGACACCACGGCAGA
GGTGTCTGTCCGCGACAACGATGACGCGGCGGCGGCGTCGCCGCCCACCT
CAGCTGCAGCAATTGCTGCTGCTTCTGCAGCGTCGGCTTCGGAGGCAAGG
GCGGAAGTGGAACTGGCAGAACCGGCGGAGAGGAGCGGCGGCCGTGCAAC
GGTGGCATCCGAAACGGACCCGCCAGAGGCGGAAGGGGAGGTTGCAGTCA
GGACGGCGGTGGCTTCAGTGGCAGCGGGGGCGGGGAGCAGCGACGGAAAG
GAAGAAATGGAGGCCGACCCGGAGCTGGAGCCGGGCCTCGACTCGGTAGG
CGCGGCGATGTCTTCATCTCAGGCTGATTCTGACGCCGAGGCGGACGCGG
CGGAGGCGTGGGTGAACGCCGGAGTGCCCGGACAGCACTCAGTGGTGAGG
ATCCTCGGGGTGGATGACTCCGTCACGCCCGAGGCGCTCTGCCAGCTCTT
CGGCCTTTACGGCGACGTCATGAAGGTGCGGCAGACGTTTGCATTTGCGT
GTTGTCATTGTATGAAGCTTCTGGCAGTTTTTGTGAGAAAAGGCGGTTGA
GGGAATGATGGCAGCAGGGAGAGGCGGCTGCAGGAAAAGGAATGGGAATG
GTGGCAGCACGCGGCCGCGGCGGCGATGTGGCAGTAGTGGTGTTATTGGC
GGATTAGGTGGTGATAGCTGCAGCGGCGGCGGTGGGAGTGGCGGTTGCAG
TATTGTCGTCCGGTTTGTTTGGTCTCGATGACGTTGTATCGCCCTCCACA
GCAACGTGAATGCGCCAGTCTGGTCCGCTTACTGCTGTATCGCCCTCCAC
GGCAAGGTGAATGCGCCAGTCTGGTCCGCTTACTTTGACAGCCGCAGCTG
CCGGTAGGCTTCCAAATCAAAATGTAACCGTCTCGTGCCTGTTCGCGTCC
ATGCTCACGCGGCTGGCCACGCCTGAGCATAGGTGAAGGTGACACGCGGT
GACAGGGGCATGGCACTGGTGCAGCTGCGGCACGCGGTGCAGGCGGACAA
GGCGCGGCACTTCCTCGACGGGGCGTTGCTGGCCGGCCGCCGCCTCCGCG
CCGACGTCTCGACGCAGGCCGCCGTCAAGGACCGCTCCGCCGCCGACTTC
GCCCGCCTGCACCAGGTCGGTTGTGGGCGTGTGTTCGCGTTTGCTGCTGG
TGGTGCGTTGATATGCCTTTCGGGAGGCTTCTTTTGGCAGGGATTGATTC
GTGACGCGGCTCGCCAACGCCTTCTTCGTTCAGTTTTGTTTTAGCTCGCT
TTGGTGTGGCGTCACCTCGACCGGTTCGCCGCTTTGTCTTCTGTTTCGTT
TTTCTTTCCAGATTTTCTTTATTGTTTAGAGCTCATTGTCCATCATCCTT
GTTTAAGTTGGAGCCCCTGTTGACCTTTTCAGTCTGTTTGGATGAAGTCC
AACCCACCTACTTTCCCTCCCTTTATTCTTTCCTCGCTCCACTCGTCGTC
CGCCACCTCCTTTCTCCTCACCCGCCGGTCTTTCACCCGTGCTCGCTTTC
ACCGTCTCCATCCCCGTGTCTGCCTCCCGACTCTATTTCTCATGCCTCCG
CCTGCCGTCTCCCCCGCCCCGCCGCCGGCCGCTAGGTACACCGCTTCGCG
GGCGTGCCGTCACCGGAGGACCCGCGCTACCTGGAACACCTCTGCGCACC
GTGCGCCACGCTTGTCGTCGACAACCTGCCGCCCGACTGCCCCTCCGAGG
AGTTGTCGGCGCTGCTGGCGCCGCACGGCCACGTCAGCTCGCTCGACGTC
GATGCCCAGACCAATCAGGTAAGGGAGGGGAGCGGGCGGTGCGGGTGGGG
CAGGCGGGAGTTGGGGCGGCATGTGACAGGAAAAGGGCAGGGAAGAAGAA
GAACGAAAAGTGAAGGGAGCGGAAGACGAAGGGGAGGGAGAGCGGTGTGG
GGGAGGGAACTGGGGAGCCTCTCTTTTCGAGTGAAATGTATAATGACTGT
ACCATGTGAGCTGGAAAAAGCAGAAGCGCGTTTTCTGGGAACATAATGAA
CACGGCAGGCGGCGTGCTTCATTGTGTCTCACCTTTTTCTCTCCTGTCCC
TACTTTCCTCTTTTTCGACCGCTTTCACATCTTGTCAGGCGGTGGTGCAG
ATGGACTGCGTACAGTCGGCGGTACATGCGCTCATCATGACGCACAACAG
CAGCCTCAAGGGCCACGTCCTCCGCGTCCTCTTCTTCAACCGATCTTTCC
ATGGCCGATGAACAAACGGGCGAAAAAGAGAGGAAGAAGCAGACCGCGCT
TCTTCAAGCGAGCGTTGTAGAGCCAATGAATGGGAGAAAAAGAGGAAGGA
GTGGCGGCGCTGGCGGCAGGTAACAGCCCCAAGACAAGCAACAGGGCAGT
GCAGGTGCGATCCAGTGCTCCCGGCAGGCGGGCCGCTGTTGACTGACGAC
CGCGCAGTGGGCTGTCCTTGCTAAAGGGTAAACAATGTGTTTGAGGCAGG
GAAGGAGAGATAGAATGCGGGCGGACAAACAAGCGAACGAGGAGGGGTGA
CGTACAAGCAATAGAAGATATACCAAATCTGTAGGTTCATGTATGGCATC
GTGACCCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1345:3110..6967-

>mRNA_P-wetherbeei_contig1345.1.1 ID=mRNA_P-wetherbeei_contig1345.1.1|Name=mRNA_P-wetherbeei_contig1345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1455bp|location=Sequence derived from alignment at P-wetherbeei_contig1345:3110..6967- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGATGTTTTGGCGGCGTTGGCGTTACGCAACAAGATGAACCGCCGCC
GGCGCCGGCGTTCCAGGAAGCGCAGCCGTCGTACGGCTACGCGGGCATGC
CGTCGATGGCACCTCTGCCATATGCAAGCTACGGCGGCGCCGGCGGTGGC
ACTCACGCAGCCGGCGACGATGGCGGCTACGCTGGGGCGAGCAGCGGCAG
CTGCGGCGGAAAATACGGTGCAGCAAATGACGTAACGGGCTATGTCGAAG
GCCCTCGCGGGCGGGGCGGCTACCCCGTGATGCCTGCGCCGGGGGCGGAA
GGAGCGGGCCTCCCGCCGCGCTGGATCGGATTGGCCAACGTTCCACCACC
AGACAGCGAGGGCGTTTTTGGCCCGAGCGTGCTCCTTTACCCACCTCAAT
TTGAGGACTTTGTGGCCGCCACGGCCGCCAAGGGCGCCGCCATTCTTGCC
GAATCCACCGAAACGGATCACCTCGCCGACACCACGGCAGAGGTGTCTGT
CCGCGACAACGATGACGCGGCGGCGGCGTCGCCGCCCACCTCAGCTGCAG
CAATTGCTGCTGCTTCTGCAGCGTCGGCTTCGGAGGCAAGGGCGGAAGTG
GAACTGGCAGAACCGGCGGAGAGGAGCGGCGGCCGTGCAACGGTGGCATC
CGAAACGGACCCGCCAGAGGCGGAAGGGGAGGTTGCAGTCAGGACGGCGG
TGGCTTCAGTGGCAGCGGGGGCGGGGAGCAGCGACGGAAAGGAAGAAATG
GAGGCCGACCCGGAGCTGGAGCCGGGCCTCGACTCGGTAGGCGCGGCGAT
GTCTTCATCTCAGGCTGATTCTGACGCCGAGGCGGACGCGGCGGAGGCGT
GGGTGAACGCCGGAGTGCCCGGACAGCACTCAGTGGTGAGGATCCTCGGG
GTGGATGACTCCGTCACGCCCGAGGCGCTCTGCCAGCTCTTCGGCCTTTA
CGGCGACGTCATGAAGGTGAAGGTGACACGCGGTGACAGGGGCATGGCAC
TGGTGCAGCTGCGGCACGCGGTGCAGGCGGACAAGGCGCGGCACTTCCTC
GACGGGGCGTTGCTGGCCGGCCGCCGCCTCCGCGCCGACGTCTCGACGCA
GGCCGCCGTCAAGGACCGCTCCGCCGCCGACTTCGCCCGCCTGCACCAGG
TACACCGCTTCGCGGGCGTGCCGTCACCGGAGGACCCGCGCTACCTGGAA
CACCTCTGCGCACCGTGCGCCACGCTTGTCGTCGACAACCTGCCGCCCGA
CTGCCCCTCCGAGGAGTTGTCGGCGCTGCTGGCGCCGCACGGCCACGTCA
GCTCGCTCGACGTCGATGCCCAGACCAATCAGGCGGTGGTGCAGATGGAC
TGCGTACAGTCGGCGGTACATGCGCTCATCATGACGCACAACAGCAGCCT
CAAGGGCCACGTCCTCCGCGTCCTCTTCTTCAACCGATCTTTCCATGGCC
GATGA
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