mRNA_P-wetherbeei_contig13441.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-wetherbeei_contig13441.2.1
Unique Name	mRNA_P-wetherbeei_contig13441.2.1
Type	mRNA
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)

Homology

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BLAST of mRNA_P-wetherbeei_contig13441.2.1 vs. uniprot
Match: A0A835YUQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUQ9_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 5.130e-21
Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = 1

Query:   25 MGGGRKFYYPKYVWAPSGGWWPQPAAWKRNTAVAFAFIGLVNYAVFQIS 171
            MGGGRKF+YPKYVW+P+GGWW QP AW+RNTAVAF  I L+N AVF +S
Sbjct:    1 MGGGRKFHYPKYVWSPAGGWWNQPTAWQRNTAVAFGAIALLNLAVFNLS 49

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BLAST of mRNA_P-wetherbeei_contig13441.2.1 vs. uniprot
Match: A0A0D2X4I4_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X4I4_CAPO3)

HSP 1 Score: 68.6 bits (166), Expect = 5.290e-14
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 1

Query:   25 MGGGRKFYYPKYVWAPSGGWWPQPAAWKRNTAVAFAFIGLVNYAVFQIS 171
            MGGG +F +P+YVW+P+GGWWP+P  WKRNT +A AFI      V+ +S
Sbjct:    1 MGGGARFEFPRYVWSPTGGWWPEPKMWKRNTLLAGAFIVAACIPVYNLS 49

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BLAST of mRNA_P-wetherbeei_contig13441.2.1 vs. uniprot
Match: UPI0001FE37FA (hypothetical protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI0001FE37FA)

HSP 1 Score: 68.6 bits (166), Expect = 6.010e-14
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 1

Query:   25 MGGGRKFYYPKYVWAPSGGWWPQPAAWKRNTAVAFAFIGLVNYAVFQIS 171
            MGGG +F +P+YVW+P+GGWWP+P  WKRNT +A AFI      V+ +S
Sbjct:    1 MGGGARFEFPRYVWSPTGGWWPEPKMWKRNTLLAGAFIVAACIPVYNLS 49

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BLAST of mRNA_P-wetherbeei_contig13441.2.1 vs. uniprot
Match: R8BX79_PHAM7 (Uncharacterized protein n=1 Tax=Phaeoacremonium minimum (strain UCR-PA7) TaxID=1286976 RepID=R8BX79_PHAM7)

HSP 1 Score: 67.4 bits (163), Expect = 2.650e-13
Identity = 28/49 (57.14%), Postives = 39/49 (79.59%), Query Frame = 1

Query:   25 MGGGRKFYYPKYVWAPSGGWWPQPAAWKRNTAVAFAFIGLVNYAVFQIS 171
            MGGG+K  YPK+VW+P+GGW+ QPA WKRNTA+A A +G+   A +++S
Sbjct:    1 MGGGKKIPYPKHVWSPAGGWYAQPANWKRNTAIAVAVMGVYLAASWKLS 49

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BLAST of mRNA_P-wetherbeei_contig13441.2.1 vs. uniprot
Match: A0A8K0LTP2_9PEZI (Uncharacterized protein n=1 Tax=Chaetomium sp. MPI-SDFR-AT-0129 TaxID=2823209 RepID=A0A8K0LTP2_9PEZI)

HSP 1 Score: 65.9 bits (159), Expect = 1.270e-12
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 1

Query:   25 MGGGRKFYYPKYVWAPSGGWWPQPAAWKRNTAVAFAFIGLVNYAVFQIS 171
            MGGG K  YPK+VW+PSGGW+ QPA WKRNTA+A A +  +   V++IS
Sbjct:    1 MGGGPKIPYPKHVWSPSGGWYAQPANWKRNTAIAIACMFGITACVWKIS 49

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BLAST of mRNA_P-wetherbeei_contig13441.2.1 vs. uniprot
Match: A0A1Z5JPC4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPC4_FISSO)

HSP 1 Score: 64.3 bits (155), Expect = 2.990e-12
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 1

Query:   25 MGGGRKFYYPKYVWAPSGGWWPQPAAWKRNTAVAFAFIGLVNYAVFQIS 171
            MGGG  +Y PK VW+P+GGWW  PA WKRNT +A A +G++   +FQ+S
Sbjct:    1 MGGGGWYYVPK-VWSPAGGWWNNPANWKRNTGIAGAVVGILAVGLFQVS 48

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BLAST of mRNA_P-wetherbeei_contig13441.2.1 vs. uniprot
Match: F0XI01_GROCL (Uncharacterized protein n=1 Tax=Grosmannia clavigera (strain kw1407 / UAMH 11150) TaxID=655863 RepID=F0XI01_GROCL)

HSP 1 Score: 63.5 bits (153), Expect = 7.530e-12
Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 1

Query:   25 MGGGRKFYYPKYVWAPSGGWWPQPAAWKRNTAVAFAFIGLVNYAVFQI 168
            MGGG K  YPK+VW+PSGGW+ QPA WKRNTA+A   +  +   V++I
Sbjct:    1 MGGGPKIPYPKHVWSPSGGWYAQPANWKRNTAIAGVAVFAITAVVWKI 48

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BLAST of mRNA_P-wetherbeei_contig13441.2.1 vs. uniprot
Match: V5IQ36_NEUCR (Uncharacterized protein n=4 Tax=Sordariaceae TaxID=5148 RepID=V5IQ36_NEUCR)

HSP 1 Score: 63.5 bits (153), Expect = 7.910e-12
Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 1

Query:   25 MGGGRKFYYPKYVWAPSGGWWPQPAAWKRNTAVAFAFIGLVNYAVFQIS 171
            MGGG +  YPK+VW+PSGGW+ QPA WK+NTAV    + L+  AV+++S
Sbjct:    1 MGGGPQVPYPKHVWSPSGGWYAQPANWKKNTAVLGGVVFLITAAVWKLS 49

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BLAST of mRNA_P-wetherbeei_contig13441.2.1 vs. uniprot
Match: A0A8E2AY14_9APHY (Uncharacterized protein n=1 Tax=Obba rivulosa TaxID=1052685 RepID=A0A8E2AY14_9APHY)

HSP 1 Score: 62.8 bits (151), Expect = 1.240e-11
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 1

Query:   25 MGGGRKFYYPKYVWAPSGGWWPQPAAWKRNTAVAFAFIGLVNYAV 159
             G G ++ YPK VW+P+GGWW +P+ WK NTA++FA I  + YAV
Sbjct:    1 QGAGARYPYPKEVWSPAGGWWSRPSNWKSNTAISFAMILAITYAV 45

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BLAST of mRNA_P-wetherbeei_contig13441.2.1 vs. uniprot
Match: E3QMK3_COLGM (Uncharacterized protein n=4 Tax=Colletotrichum TaxID=5455 RepID=E3QMK3_COLGM)

HSP 1 Score: 62.0 bits (149), Expect = 3.800e-11
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 1

Query:   25 MGGGRKFYYPKYVWAPSGGWWPQPAAWKRNTAVAFAFIGLVNYAVFQIS 171
            MGGG K  YPK+VW+P+GGW+ QPA WKRNTAV  A +  V   +++IS
Sbjct:    1 MGGGPKVPYPKHVWSPAGGWYAQPANWKRNTAVIGAVMAGVVAVIWKIS 49

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig13441.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig13441.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YUQ9_9STRA	5.130e-21	73.47	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A0D2X4I4_CAPO3	5.290e-14	55.10	Uncharacterized protein n=1 Tax=Capsaspora owczarz...	[more]
UPI0001FE37FA	6.010e-14	55.10	hypothetical protein n=1 Tax=Capsaspora owczarzaki...	[more]
R8BX79_PHAM7	2.650e-13	57.14	Uncharacterized protein n=1 Tax=Phaeoacremonium mi...	[more]
A0A8K0LTP2_9PEZI	1.270e-12	59.18	Uncharacterized protein n=1 Tax=Chaetomium sp. MPI...	[more]
A0A1Z5JPC4_FISSO	2.990e-12	55.10	Uncharacterized protein n=1 Tax=Fistulifera solari...	[more]
F0XI01_GROCL	7.530e-12	56.25	Uncharacterized protein n=1 Tax=Grosmannia clavige...	[more]
V5IQ36_NEUCR	7.910e-12	55.10	Uncharacterized protein n=4 Tax=Sordariaceae TaxID...	[more]
A0A8E2AY14_9APHY	1.240e-11	53.33	Uncharacterized protein n=1 Tax=Obba rivulosa TaxI...	[more]
E3QMK3_COLGM	3.800e-11	57.14	Uncharacterized protein n=4 Tax=Colletotrichum Tax...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig13441	contig	P-wetherbeei_contig13441:1667..1837 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	1
Seed ortholog	192875.XP_004345232.1
Model size	171
Max annot lvl	33154\|Opisthokonta
Hectar predicted targeting category	no signal peptide or anchor
Exons	1
Evalue	3.49e-15
EggNOG OGs	2CGJ1@1\|root,2S6YK@2759\|Eukaryota,3A92W@33154\|Opisthokonta
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-05_004010.1
Cds size	147

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683185985.6566403-UTR-P-wetherbeei_contig13441:1666..1690	1683185985.6566403-UTR-P-wetherbeei_contig13441:1666..1690	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig13441 1667..1690 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683185985.6670256-CDS-P-wetherbeei_contig13441:1690..1837	1683185985.6670256-CDS-P-wetherbeei_contig13441:1690..1837	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig13441 1691..1837 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig13441.2.1	prot_P-wetherbeei_contig13441.2.1	Phaeothamnion wetherbeei SAG_119_79	polypeptide	P-wetherbeei_contig13441 1691..1837 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-wetherbeei_contig13441:1667..1837+
coding sequence from alignment at P-wetherbeei_contig13441:1667..1837+

protein sequence of mRNA_P-wetherbeei_contig13441.2.1

>prot_P-wetherbeei_contig13441.2.1 ID=prot_P-wetherbeei_contig13441.2.1|Name=mRNA_P-wetherbeei_contig13441.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=49bp
MGGGRKFYYPKYVWAPSGGWWPQPAAWKRNTAVAFAFIGLVNYAVFQIS

mRNA from alignment at P-wetherbeei_contig13441:1667..1837+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-wetherbeei_contig13441.2.1 ID=mRNA_P-wetherbeei_contig13441.2.1|Name=mRNA_P-wetherbeei_contig13441.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=171bp|location=Sequence derived from alignment at P-wetherbeei_contig13441:1667..1837+ (Phaeothamnion wetherbeei SAG_119_79)
CCTCCCACCTCTCAAGCACGAACCATGGGCGGCGGACGGAAGTTCTATTA
CCCCAAATATGTCTGGGCGCCGTCCGGAGGCTGGTGGCCCCAACCAGCAG
CGTGGAAGCGCAATACTGCCGTCGCTTTCGCCTTCATCGGCCTCGTAAAC
TACGCCGTGTTTCAGATCTCG

Coding sequence (CDS) from alignment at P-wetherbeei_contig13441:1667..1837+

>mRNA_P-wetherbeei_contig13441.2.1 ID=mRNA_P-wetherbeei_contig13441.2.1|Name=mRNA_P-wetherbeei_contig13441.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=147bp|location=Sequence derived from alignment at P-wetherbeei_contig13441:1667..1837+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCGGCGGACGGAAGTTCTATTACCCCAAATATGTCTGGGCGCCGTC
CGGAGGCTGGTGGCCCCAACCAGCAGCGTGGAAGCGCAATACTGCCGTCG
CTTTCGCCTTCATCGGCCTCGTAAACTACGCCGTGTTTCAGATCTCG