mRNA_P-wetherbeei_contig13433.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13433.1.1
Unique NamemRNA_P-wetherbeei_contig13433.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13433.1.1 vs. uniprot
Match: D8LM51_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM51_ECTSI)

HSP 1 Score: 289 bits (740), Expect = 8.190e-96
Identity = 135/220 (61.36%), Postives = 174/220 (79.09%), Query Frame = 1
Query:    1 QRNTNVIIALMFGFFISSVITYDGKDFVTNDKIKAADWVTFLWVYTYPIGIYGPAVLPLILGYLIVTVETVGDITATEEASNLEVVGPEHSARVSNALRGDFIAGAFAALGTTMPNTTFAQNNGVISLTRCSARRAGMGCAFWLVFFGVIAKFAAFFTSIPDCVLGGMTTFLFANVSCSGIKILSNT--NRRDRFILACALTIGLGVAIAPEWAENNLWP 654
             R+ NV++AL+FG+F+++V   +G D+V +DKI AAD +TFLWV+TYP+ +Y P +LP IL +++ TVET+GD+T T E S L V   EH  R+   L GD I+   AALGT+MPNTTF+QNNGVI+LTRC++RRAG+ CA WL+ FG++AK AAFFTSIPDCVLGGMTTFLFANV+ SGIKILS+   +RR RFI+AC++ +GLGV IAP WA NNLWP
Sbjct:    1 MRSINVVVALLFGYFVAAVSENNGNDYVVSDKIDAADSITFLWVFTYPLSVYPPLILPSILAFIVTTVETIGDVTTTAEVSRLNVDSEEHFQRIRGGLLGDGISSFLAALGTSMPNTTFSQNNGVIALTRCASRRAGLACACWLIVFGILAKIAAFFTSIPDCVLGGMTTFLFANVAVSGIKILSSAGDSRRSRFIVACSMGLGLGVTIAPAWATNNLWP 220          
BLAST of mRNA_P-wetherbeei_contig13433.1.1 vs. uniprot
Match: A0A087SI12_AUXPR (Uric acid-xanthine permease n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SI12_AUXPR)

HSP 1 Score: 258 bits (658), Expect = 1.040e-79
Identity = 124/218 (56.88%), Postives = 163/218 (74.77%), Query Frame = 1
Query:    4 RNTNVIIALMFGFFISSVITYDGKDFVTNDKIKAADWVTFLWVYTYPIGIYGPAVLPLILGYLIVTVETVGDITATEEASNLEVVGPEHSARVSNALRGDFIAGAFAALGTTMPNTTFAQNNGVISLTRCSARRAGMGCAFWLVFFGVIAKFAAFFTSIPDCVLGGMTTFLFANVSCSGIKILSNTN--RRDRFILACALTIGLGVAIAPEWAENNLW 651
            RN  VII+L+FG+ ++ V   DGK FVT  KI  A  +TFLWV+T+P+ +YGPAVLPLI+ + I ++ETVGD+ ATEEAS L+  GP H+ R   AL  D I+G F+AL T++P TTFAQNNG+I+LT  ++R+AG  CA WL  FG+I KF    T+IP+CVLGGMTTFLFANV  SGIKI+ + +  RR+RF++ACAL +G+GV + P WA+NNLW
Sbjct:  243 RNCAVIISLLFGYMLAGVTRADGKRFVTGTKIANAPAITFLWVHTFPLNVYGPAVLPLIIVFTITSIETVGDVAATEEASFLQTSGPAHNKRTRGALLNDGISGIFSALATSLPLTTFAQNNGIIALTAVASRQAGWACAGWLFIFGLIGKFGGVITTIPNCVLGGMTTFLFANVIASGIKIMISQHFTRRNRFVIACALALGIGVTLVPNWAQNNLW 460          
BLAST of mRNA_P-wetherbeei_contig13433.1.1 vs. uniprot
Match: E1ZE94_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZE94_CHLVA)

HSP 1 Score: 254 bits (650), Expect = 6.490e-78
Identity = 124/216 (57.41%), Postives = 158/216 (73.15%), Query Frame = 1
Query:   13 NVIIALMFGFFISSVITYDGKDFVTNDKIKAADWVTFLWVYTYPIGIYGPAVLPLILGYLIVTVETVGDITATEEASNLEVVGPEHSARVSNALRGDFIAGAFAALGTTMPNTTFAQNNGVISLTRCSARRAGMGCAFWLVFFGVIAKFAAFFTSIPDCVLGGMTTFLFANVSCSGIKIL--SNTNRRDRFILACALTIGLGVAIAPEWAENNLWP 654
            NVIIAL+FG+ I+ + TYDG  FVT  KI AA  +TFLWV+T+P+ IY P +LP+++ + I ++ETVGD+ ATEEAS +   GP H  R+  AL  D I G F+AL T++P TTFAQNNGVISLT  ++R+AG  CA WL   GVIAKFAA  T+IPDCV GGMTTFLFANV  SGIKI+   +  RR+R ILA ++ +G+GV + P+WA N LWP
Sbjct:  325 NVIIALLFGYMIAGIATYDGAKFVTGAKISAAPAITFLWVHTFPLKIYAPLILPMLIVFTITSIETVGDVAATEEASFISTEGPSHDKRIRGALLNDGIGGIFSALATSLPLTTFAQNNGVISLTAVASRQAGWSCAIWLFVLGVIAKFAAVITTIPDCVFGGMTTFLFANVIASGIKIIVGDHLTRRNRVILAFSMALGVGVTLVPQWATNALWP 540          
BLAST of mRNA_P-wetherbeei_contig13433.1.1 vs. uniprot
Match: A0A5J4Y735_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y735_9CHLO)

HSP 1 Score: 250 bits (638), Expect = 3.330e-76
Identity = 125/220 (56.82%), Postives = 155/220 (70.45%), Query Frame = 1
Query:    1 QRNTNVIIALMFGFFISSVITYDG-KDFVTNDKIKAADWVTFLWVYTYPIGIYGPAVLPLILGYLIVTVETVGDITATEEASNLEVVGPEHSARVSNALRGDFIAGAFAALGTTMPNTTFAQNNGVISLTRCSARRAGMGCAFWLVFFGVIAKFAAFFTSIPDCVLGGMTTFLFANVSCSGIKILSNT--NRRDRFILACALTIGLGVAIAPEWAENNLW 651
             RN  VIIAL+ G+ +S+VIT +G + ++T+     A  +TFLWV T+  G Y PAVLP ++G+++ TVE +GDITATEEAS L   G +H+ RV   L GD I   FAAL  ++PNTTFAQNNGV++LTRC++R AG  C  WL  FGV+AK  AFFTSIP CVLGGMTTFLFA V  SGIK++S     RR RFIL  A+ +GLGV I P WA NNLW
Sbjct:  286 MRNCEVIIALLLGYMVSAVITSNGGQKYITSSDFSTAPSITFLWVKTFGFGFYAPAVLPFLIGFVLTTVEAIGDITATEEASALATFGDKHNRRVQGGLLGDGINSFFAALAGSLPNTTFAQNNGVLALTRCASRTAGYSCGIWLFLFGVLAKVGAFFTSIPQCVLGGMTTFLFAGVCVSGIKVISMDPLTRRSRFILCVAVGLGLGVTIVPNWATNNLW 505          
BLAST of mRNA_P-wetherbeei_contig13433.1.1 vs. uniprot
Match: A0A2P6V3N6_9CHLO (Uric acid-xanthine permease isoform A n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V3N6_9CHLO)

HSP 1 Score: 252 bits (643), Expect = 1.180e-74
Identity = 122/222 (54.95%), Postives = 160/222 (72.07%), Query Frame = 1
Query:    1 QRNTNVIIALMFGFFISSVITYDGKDFVTNDKIKAADWVTFLWVYTYPIGIYGPAVLPLILGYLIVTVETVGDITATEEASNLEVVGPEHSARVSNALRGDFIAGAFAALGTTMPNTTFAQNNGVISLTRCSARRAGMGCAFWLVFFGVIAKFAAFFTSIPDCVLGGMTTFLFANVSCSGIKIL--SNTNRRDRFILACALTIGLGVAIAPEWAEN--NLWP 654
             RN  V+IAL+FG+F++ V TYDGK FVT+ +I  A  +TFLWV+T+P+ IYGP VLP+++ + I  +ETVGD+TATEEAS L   GP H  R+  AL  D ++  F+AL T++P TTFAQNNGVISLT  ++R+AG  CA WL   GV+AKF    TSIPDCV GGMTTFLFANV  SG+KI+   + +RR+R I+A +  +G+GV + P+WA N   LWP
Sbjct:  289 MRNCEVVIALLFGYFVAGVSTYDGKRFVTSAEIDNAPAITFLWVHTFPLKIYGPLVLPMLIIFCITCIETVGDVTATEEASFLSTTGPGHETRIRGALLNDGLSSIFSALATSLPLTTFAQNNGVISLTAVASRQAGWACAIWLFLMGVLAKFGGIITSIPDCVFGGMTTFLFANVIASGVKIIVGQHLSRRNRIIMAFSFALGIGVTLVPQWASNPNGLWP 510          
BLAST of mRNA_P-wetherbeei_contig13433.1.1 vs. uniprot
Match: A0A835SW08_CHLIN (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835SW08_CHLIN)

HSP 1 Score: 244 bits (623), Expect = 9.720e-74
Identity = 119/221 (53.85%), Postives = 158/221 (71.49%), Query Frame = 1
Query:    1 QRNTNVIIALMFGFFISSVITYDGKDFVTNDKIKAADWVTFLWVYTYPIGIYGPAVLPLILGYLIVTVETVGDITATEEASNLEVVGPEHSARVSNALRGDFIAGAFAALGTTMPNTTFAQNNGVISLTRCSARRAGMGCAFWLVFFGVIAKFAAFFTSIPDCVLGGMTTFLFANVSCSGIKILSNTN---RRDRFILACALTIGLGVAIAPEWAENNLWP 654
             RN +VI+AL+FG+ I++V  Y+GK +V   KI  A  +TFLW  T+P+G YGPAV+PL++ ++I ++ETVGD  AT EAS + V   + + R+  AL  D I+G F+AL T++P TTFAQNNGVISLT  +AR+AG   AFWL   G++ K  A+ T+IP+CVLGGMTTFLFANV  SGIKI+ N +   RR RFILAC+L +  GV + P+WA  NLWP
Sbjct:  314 MRNASVILALLFGYLIAAVTNYNGKKYVITTKIDQAPGITFLWTTTFPLGFYGPAVIPLMIVFIITSIETVGDTAATMEASRMAVDTEDGTRRIKGALLNDGISGIFSALATSLPLTTFAQNNGVISLTNVAARQAGFAAAFWLFLLGILGKVGAWITTIPECVLGGMTTFLFANVIASGIKIIINGDPLTRRSRFILACSLALAFGVELVPQWATLNLWP 534          
BLAST of mRNA_P-wetherbeei_contig13433.1.1 vs. uniprot
Match: A8IB05_CHLRE (Predicted protein n=6 Tax=Chlamydomonas TaxID=3052 RepID=A8IB05_CHLRE)

HSP 1 Score: 244 bits (623), Expect = 1.490e-73
Identity = 118/221 (53.39%), Postives = 159/221 (71.95%), Query Frame = 1
Query:    1 QRNTNVIIALMFGFFISSVITYDGKDFVTNDKIKAADWVTFLWVYTYPIGIYGPAVLPLILGYLIVTVETVGDITATEEASNLEVVGPEHSARVSNALRGDFIAGAFAALGTTMPNTTFAQNNGVISLTRCSARRAGMGCAFWLVFFGVIAKFAAFFTSIPDCVLGGMTTFLFANVSCSGIKILSNTN---RRDRFILACALTIGLGVAIAPEWAENNLWP 654
             RN +VI+AL+FG+FI++V  Y GK +V   KI  A  +TFLW  T+P+G Y PA++PL++ ++I ++ETVGD  AT EAS ++V   + + R+  AL  D I+G F+AL T++P TTFAQNNGVISLT  +AR+AG   AFWL+  G++ K  A+ T+IP+CVLGGMTTFLFANV  SGIKI+ N +   RR RFILAC+L +  GV + P+WA  NLWP
Sbjct:  318 MRNASVILALLFGYFIAAVTNYQGKKYVITTKIDQAPGITFLWTTTFPLGFYPPAIIPLMIVFIITSIETVGDTAATLEASRMQVNTEDGTRRIKGALLNDGISGIFSALATSLPLTTFAQNNGVISLTNVAARQAGFAAAFWLLLLGILGKVGAWITTIPECVLGGMTTFLFANVIASGIKIIINGDPLTRRSRFILACSLALAFGVELVPQWATLNLWP 538          
BLAST of mRNA_P-wetherbeei_contig13433.1.1 vs. uniprot
Match: A0A1Z5KLZ2_FISSO (Nucleobase:cation symporter-2, NCS2 family n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLZ2_FISSO)

HSP 1 Score: 242 bits (617), Expect = 2.020e-73
Identity = 118/212 (55.66%), Postives = 156/212 (73.58%), Query Frame = 1
Query:    1 QRNTNVIIALMFGFFISSVITYDGKDFVTNDKIKAADWVTFLWVYTYPIGIYGPAVLPLILGYLIVTVETVGDITATEEASNLEVVGPEHSARVSNALRGDFIAGAFAALGTTMPNTTFAQNNGVISLTRCSARRAGMGCAFWLVFFGVIAKFAAFFTSIPDCVLGGMTTFLFANVSCSGIKILSNTN---RRDRFILACALTIGLGVAIAP 627
             +N NV IALMFG+FI++V  Y+G  +VT DKI  AD +TFLWV T+P+G+YGPAV+P+++ YL+ TVETVGDITAT EAS+L     ++   V   L  D      + + T+MPNTTF+QNNGVISLT+C++RR+G  CAFWL+  GV++KFA   TSIPDCV+GGMT FLFANV  SGI +  N +   RR++FILA +L IG+GV++ P
Sbjct:  281 MKNCNVFIALMFGYFIAAVSDYNGLQYVTKDKIADADPITFLWVETFPLGVYGPAVIPMLIAYLVTTVETVGDITATFEASDLPTDTEDYEGSVQGGLTSDAFCSILSGIFTSMPNTTFSQNNGVISLTKCASRRSGYACAFWLITMGVLSKFAGVITSIPDCVIGGMTIFLFANVLASGIALTGNIDLHSRRNKFILALSLAIGVGVSVWP 492          
BLAST of mRNA_P-wetherbeei_contig13433.1.1 vs. uniprot
Match: A8II65_CHLRE (Uric acid-xanthine permease n=2 Tax=Chlamydomonas TaxID=3052 RepID=A8II65_CHLRE)

HSP 1 Score: 243 bits (619), Expect = 4.080e-73
Identity = 119/221 (53.85%), Postives = 157/221 (71.04%), Query Frame = 1
Query:    1 QRNTNVIIALMFGFFISSVITYDGKDFVTNDKIKAADWVTFLWVYTYPIGIYGPAVLPLILGYLIVTVETVGDITATEEASNLEVVGPEHSARVSNALRGDFIAGAFAALGTTMPNTTFAQNNGVISLTRCSARRAGMGCAFWLVFFGVIAKFAAFFTSIPDCVLGGMTTFLFANVSCSGIKILSNTN---RRDRFILACALTIGLGVAIAPEWAENNLWP 654
             RN +VI+AL+FG+ I++V TY GK +V   KI  A  +TFLW  T+P+G Y PA++PL++ ++I ++ETVGD  AT EAS + V   + + R+  AL  D I+G F+AL T++P TTFAQNNGVISLT  +AR+AG   AFWL   GV+ K  A+ T+IP+CVLGGMTTFLFANV  SGIKI+ N +   RR RFILAC+L +  GV + P+WA  NLWP
Sbjct:  331 MRNASVILALLFGYLIAAVTTYQGKKYVITTKIDQAPGITFLWTTTFPLGFYSPAIIPLMIVFIITSIETVGDTAATMEASRMLVNTEDGTRRIKGALLNDGISGIFSALATSLPLTTFAQNNGVISLTNVAARQAGFAAAFWLFLLGVLGKVGAWITTIPECVLGGMTTFLFANVIASGIKIIINGDPLTRRSRFILACSLALAFGVELVPQWATLNLWP 551          
BLAST of mRNA_P-wetherbeei_contig13433.1.1 vs. uniprot
Match: A8II76_CHLRE (Uric acid-xanthine permease n=4 Tax=Chlamydomonas TaxID=3052 RepID=A8II76_CHLRE)

HSP 1 Score: 241 bits (616), Expect = 5.600e-73
Identity = 117/221 (52.94%), Postives = 158/221 (71.49%), Query Frame = 1
Query:    1 QRNTNVIIALMFGFFISSVITYDGKDFVTNDKIKAADWVTFLWVYTYPIGIYGPAVLPLILGYLIVTVETVGDITATEEASNLEVVGPEHSARVSNALRGDFIAGAFAALGTTMPNTTFAQNNGVISLTRCSARRAGMGCAFWLVFFGVIAKFAAFFTSIPDCVLGGMTTFLFANVSCSGIKILSNTN---RRDRFILACALTIGLGVAIAPEWAENNLWP 654
             RN +VI+AL+FG+ I++V TY GK +V   KI  A  +TFLW  T+P+G Y PA++PL++ ++I ++ETVGD +AT EAS + V   + + R+  AL  D I+G F+AL T++P TTFAQNNGVI+LT  +AR+AG   AFWL   G++ K  A+ T+IP+CVLGGMTTFLFANV  SGIKI+ N +   RR RFILAC+L +  GV + P+WA  NLWP
Sbjct:  309 MRNASVILALLFGYLIAAVTTYQGKKYVITTKIDQAPGITFLWTTTFPLGFYPPAIIPLMIVFIITSIETVGDTSATMEASRMAVDTEDGTRRIKGALLNDGISGIFSALATSLPLTTFAQNNGVIALTNVAARQAGFAAAFWLFLLGILGKVGAWITTIPECVLGGMTTFLFANVIASGIKIIINGDPLTRRSRFILACSLALAFGVELVPQWATLNLWP 529          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13433.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM51_ECTSI8.190e-9661.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A087SI12_AUXPR1.040e-7956.88Uric acid-xanthine permease n=3 Tax=Auxenochlorell... [more]
E1ZE94_CHLVA6.490e-7857.41Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
A0A5J4Y735_9CHLO3.330e-7656.82Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A2P6V3N6_9CHLO1.180e-7454.95Uric acid-xanthine permease isoform A n=1 Tax=Micr... [more]
A0A835SW08_CHLIN9.720e-7453.85Uncharacterized protein n=3 Tax=Chlamydomonas TaxI... [more]
A8IB05_CHLRE1.490e-7353.39Predicted protein n=6 Tax=Chlamydomonas TaxID=3052... [more]
A0A1Z5KLZ2_FISSO2.020e-7355.66Nucleobase:cation symporter-2, NCS2 family n=2 Tax... [more]
A8II65_CHLRE4.080e-7353.85Uric acid-xanthine permease n=2 Tax=Chlamydomonas ... [more]
A8II76_CHLRE5.600e-7352.94Uric acid-xanthine permease n=4 Tax=Chlamydomonas ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13433contigP-wetherbeei_contig13433:283..1769 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LM51
PFAMsXan_ur_permease
Model size654
Max annot lvl2759|Eukaryota
KEGG koko:K03458
KEGG TC2.A.40
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0002054,GO:0002060,GO:0003674,GO:0005215,GO:0005345,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005773,GO:0005775,GO:0005776,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006863,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0010008,GO:0012505,GO:0015075,GO:0015143,GO:0015205,GO:0015711,GO:0015747,GO:0015851,GO:0016020,GO:0016021,GO:0022857,GO:0031090,GO:0031224,GO:0031226,GO:0031410,GO:0031974,GO:0031982,GO:0034220,GO:0034423,GO:0036094,GO:0042906,GO:0042907,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0070013,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:0097159,GO:0097708,GO:0098588,GO:0098655,GO:0098656,GO:0098805,GO:1901363,GO:1901702,GO:1904823
Exons4
Evalue9.37e-92
EggNOG OGsCOG2233@1|root,2QQD4@2759|Eukaryota
Ec32 ortholog descriptionXanthine/uracil/vitamin C permease
Ec32 orthologEc-06_002480.1
Descriptionxanthine transmembrane transporter activity
Cds size624
COG categoryF
BRITEko00000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185985.1629353-UTR-P-wetherbeei_contig13433:282..3121683185985.1629353-UTR-P-wetherbeei_contig13433:282..312Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig13433 283..312 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185985.1764238-CDS-P-wetherbeei_contig13433:312..4111683185985.1764238-CDS-P-wetherbeei_contig13433:312..411Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13433 313..411 +
1683185985.1838052-CDS-P-wetherbeei_contig13433:645..7871683185985.1838052-CDS-P-wetherbeei_contig13433:645..787Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13433 646..787 +
1683185985.192855-CDS-P-wetherbeei_contig13433:1163..13641683185985.192855-CDS-P-wetherbeei_contig13433:1163..1364Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13433 1164..1364 +
1683185985.2025862-CDS-P-wetherbeei_contig13433:1587..17691683185985.2025862-CDS-P-wetherbeei_contig13433:1587..1769Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13433 1588..1769 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13433.1.1prot_P-wetherbeei_contig13433.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13433 313..1769 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13433.1.1

>prot_P-wetherbeei_contig13433.1.1 ID=prot_P-wetherbeei_contig13433.1.1|Name=mRNA_P-wetherbeei_contig13433.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=208bp
MFGFFISSVITYDGKDFVTNDKIKAADWVTFLWVYTYPIGIYGPAVLPLI
LGYLIVTVETVGDITATEEASNLEVVGPEHSARVSNALRGDFIAGAFAAL
GTTMPNTTFAQNNGVISLTRCSARRAGMGCAFWLVFFGVIAKFAAFFTSI
PDCVLGGMTTFLFANVSCSGIKILSNTNRRDRFILACALTIGLGVAIAPE
WAENNLWP
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mRNA from alignment at P-wetherbeei_contig13433:283..1769+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13433.1.1 ID=mRNA_P-wetherbeei_contig13433.1.1|Name=mRNA_P-wetherbeei_contig13433.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1487bp|location=Sequence derived from alignment at P-wetherbeei_contig13433:283..1769+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCGCAACACGAACGTGATCATCGCGCTTATGTTCGGCTTCTTCATCTC GTCGGTCATCACGTACGACGGCAAGGACTTCGTGACCAATGACAAGATCA AGGCTGCCGACTGGGTCACCTTCCTCTGGGTGAGAAGAAAGTGGGAATTA TTATGATAAGTATGCGATGGGAGTGGAGAAGGGCAGGGGGAGACGGAAGA GCGAAGATAGGCATAGTGCTGGTGCAGCTTATCTGTGAGGACGTTGGGAA GAGTCCAGATTGATATAGTTCGTTAGGTCGGGAAAGTTCTGACCTTAAAA CGCGGTCCCAAACGCAACGCTAATCGCAAAACCGTCACCTGCCATCTCCG TATCTTTGGTCAGGTGTACACGTACCCGATCGGCATCTATGGCCCGGCGG TGCTGCCGCTTATCCTGGGCTACCTCATTGTGACGGTGGAGACGGTCGGC GACATCACCGCCACGGAGGAGGCATCCAACCTTGAGGTCGTCGGCCCCGA GCACTGTGAGCTGATTAGCAGTCCCATTATTGTTCCGTTCCTGTTCTGTT GCCGTTCCGTTCCCGTCGGCCAGTTGATGGCCGGGGCCAGCGGCGGTAGG GGATATGCTGTGGTTAGCAGTTACAGCAGTTTCTCGATTGTTTTGGCCGT TTCGGTCGTCACGGCGGTTTCGGGTGGCTCCCAACGACGACATCAAACGA GACATGAATATGGTCCCATCCTGCCCTTTTGGCAGCTGAACGCGAAAATT TCGTGCCGACCAGTTGGCGAGGCAGCCGTGTATGATAGTTTCGCTGCTGC TGCACTCGGTACACGATACGTTCCTTTTTCGACTCGTCGTTCCCTTCTGT TACCCGCTAAAACAAACGACGACAAAAACAGCGGCGCGCGTTTCCAATGC GCTGCGTGGCGATTTCATTGCGGGGGCGTTCGCGGCGCTCGGCACGACGA TGCCCAACACGACCTTCGCGCAGAACAACGGTGTCATCAGCCTGACGCGC TGCAGCGCCCGGCGCGCCGGCATGGGCTGCGCGTTCTGGCTCGTCTTCTT TGGCGTCATCGCCAAGTTCGCCGCCTTCTTCAGTGAGTCAGCTTCTTTAC GCTCTGCGCTTTTTTATTGGGTCCTCGGTATCTGCACGCGTTAGAAACTT GCCTTTCTTTTTATTTTGACCTCGGGATGGCTGATTTTGTCGGGATGGCT GATTTTGTCCGGGAATTTACCCACTCGCCTCTAGCTAACCGCTGCCTTTC CTTCTGTCGCGCCTTTGCTACCGCCGCTGCCGCCGCTGCCTGACAACAAT TGTAGCGTCCATCCCGGACTGCGTGCTGGGCGGCATGACGACGTTCTTGT TCGCCAATGTGTCTTGCTCCGGCATCAAGATCCTCTCCAACACGAACCGC CGCGACCGCTTCATTCTCGCCTGCGCCCTCACCATCGGCCTCGGCGTCGC CATCGCCCCGGAGTGGGCCGAGAACAACCTCTGGCCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13433:283..1769+

>mRNA_P-wetherbeei_contig13433.1.1 ID=mRNA_P-wetherbeei_contig13433.1.1|Name=mRNA_P-wetherbeei_contig13433.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=624bp|location=Sequence derived from alignment at P-wetherbeei_contig13433:283..1769+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTTCGGCTTCTTCATCTCGTCGGTCATCACGTACGACGGCAAGGACTT
CGTGACCAATGACAAGATCAAGGCTGCCGACTGGGTCACCTTCCTCTGGG
TGTACACGTACCCGATCGGCATCTATGGCCCGGCGGTGCTGCCGCTTATC
CTGGGCTACCTCATTGTGACGGTGGAGACGGTCGGCGACATCACCGCCAC
GGAGGAGGCATCCAACCTTGAGGTCGTCGGCCCCGAGCACTCGGCGCGCG
TTTCCAATGCGCTGCGTGGCGATTTCATTGCGGGGGCGTTCGCGGCGCTC
GGCACGACGATGCCCAACACGACCTTCGCGCAGAACAACGGTGTCATCAG
CCTGACGCGCTGCAGCGCCCGGCGCGCCGGCATGGGCTGCGCGTTCTGGC
TCGTCTTCTTTGGCGTCATCGCCAAGTTCGCCGCCTTCTTCACGTCCATC
CCGGACTGCGTGCTGGGCGGCATGACGACGTTCTTGTTCGCCAATGTGTC
TTGCTCCGGCATCAAGATCCTCTCCAACACGAACCGCCGCGACCGCTTCA
TTCTCGCCTGCGCCCTCACCATCGGCCTCGGCGTCGCCATCGCCCCGGAG
TGGGCCGAGAACAACCTCTGGCCC
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