mRNA_P-wetherbeei_contig1341.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1341.1.1 vs. uniprot
Match: A0A4Q3BG33_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3BG33_9BACT) HSP 1 Score: 143 bits (360), Expect = 2.180e-35 Identity = 110/305 (36.07%), Postives = 162/305 (53.11%), Query Frame = 1
Query: 1 LSELRQMVLRRQAATGRSLLRVFRHFDRSRSGWVGPCDAAEALKDLRI---------AVPAAGAAALVAFCYGDFATLVADPHHGELERELCRQMAAQLETVGPSYR--LAQVFRRR---RGECLDGDGGAEELEEWMPAPRFAAALAALGLRLDAVDMQRLLHRFDLHGDGRLSPAHFLTFCRITVFSSPEWRHAAEEGRRQAAAEEEAATVTVQRREC----GRWPVPG---LSSDLVAMARRLGISVVTDSHLLHVAAEALAAPLPAGWSVAAAADGRRCYLHAEAGISRWDHPLDAHYRAI 852
L+ LR ++L R GRSL +F+HFDR R + D +A +DLRI A+ G +L C+G+F T V D H LE ++ Q+AA E G ++ LAQ R R + + D A+E + + F A L GL L + D+ RL RFD+HG+ S FL ++ + S+P WRHA + R Q A +EAA + R+E GR +PG L+ +L+AM LGI V+++ +++ +AA+AL APLP W GR + + +G SRW+HPLD H+R +
Sbjct: 28 LATLRDIILARYRK-GRSLQEIFQHFDRDRKRFFDREDFVQATRDLRIEVSDKVASLAIQQMGVDSLDCVCFGEFKTFVLDAEHRLLELQVTEQLAALFEQQGRAFLSFLAQALLCREPDRQQQEERDAVADE-QPLLDKATFLAGLRKAGLVLSSADLSRLADRFDVHGNDFCSSRRFL---KMLLRSAP-WRHAEKVLRYQDRAMQEAARL---RQELVSNPGRQTMPGAPPLTEELIAMCEYLGICVLSEQNMIWIAADALKAPLPVNWVALKDESGRTFFHNRLSGQSRWEHPLDPHFRKL 323
BLAST of mRNA_P-wetherbeei_contig1341.1.1 vs. uniprot
Match: D8LUA6_ECTSI (WW domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA6_ECTSI) HSP 1 Score: 132 bits (331), Expect = 7.480e-31 Identity = 85/203 (41.87%), Postives = 108/203 (53.20%), Query Frame = 1
Query: 277 VGPSYRLAQVFRRRRGECLDGDGGAEELEEWMPAPRFAAALAALGLRLDAVDMQRLLHRFDLHGDGRLSPAHFLTFCRITVFSSPEWRHAAEEGRRQAAAEEEAATVTVQRRECGRWPVP-----------GLSSDLVAMARRLGISVVTDSHLLHVAAEALAAPLPAGWSVAAAADGRRCYLHAEAGISRWDHPLDAHYRAI 852
+G S + A V R E GD GAE ++ + A F A L LGLRL D RL+ RFD+HGDG LS F++ V SS W A Q A+EEA R G WP L +D+V MAR +GI V +DS LL +AA+ALAAPLP GW++ + +GR Y + G SRWDHPLD H+R +
Sbjct: 931 LGVSAKAAAVDRHSCSESGLGDVGAEGEKQGVSAEEFLAGLRGLGLRLSVSDAHRLIVRFDVHGDGHLSTRRFISM----VESSRPWTRALTRLAHQEEADEEADACLRAYRVHGEWPSAVEQSQGQGVALTLDADIVEMARYIGIRVSSDSSLLWIAADALAAPLPNGWAMHKSKEGRWFYHNDLTGQSRWDHPLDPHFRQL 1129
BLAST of mRNA_P-wetherbeei_contig1341.1.1 vs. uniprot
Match: A0A6H5J9P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9P3_9PHAE) HSP 1 Score: 132 bits (331), Expect = 7.500e-31 Identity = 85/202 (42.08%), Postives = 109/202 (53.96%), Query Frame = 1
Query: 280 GPSYRLAQVFRRRRGECLDGDGGAEELEEWMPAPRFAAALAALGLRLDAVDMQRLLHRFDLHGDGRLSPAHFLTFCRITVFSSPEWRHAAEEGRRQAAAEEEAATVTVQRRECGRWP-----------VPGLSSDLVAMARRLGISVVTDSHLLHVAAEALAAPLPAGWSVAAAADGRRCYLHAEAGISRWDHPLDAHYRAI 852
G S + A V R+ E GD G E ++ + A F A L LGLRL D RL+ RFD+HGDG LS F++ V SS W A Q A+EEA + G WP V L +D+V MAR LGI V +DS LL +AA+ALAAPLP GW++ + +GR Y + G SRWDHPLD+H+R +
Sbjct: 938 GMSAKAAAVDRQSCSESGLGDVGVEGEKQGVSAEEFLAGLRGLGLRLSVSDAHRLIVRFDVHGDGHLSTRRFISM----VESSRPWTRALTRLAHQEEADEEADACLRAYKVHGEWPSAVEQSQGQDAVLTLDADIVEMARYLGIRVSSDSSLLWIAADALAAPLPNGWAMHKSREGRWFYHNDLTGQSRWDHPLDSHFRQL 1135
BLAST of mRNA_P-wetherbeei_contig1341.1.1 vs. uniprot
Match: A0A836CFZ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ4_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.460e-23 Identity = 88/270 (32.59%), Postives = 116/270 (42.96%), Query Frame = 1
Query: 187 YGDFATLVADPHHGELERELCRQMAAQLETV---GPSYRLAQVFRRR-------------------RGECL---DGDGGAEELEE---WMPAPRFAAALAALGLRLDAVDMQRLLHRFD--------------------LHGDGRLSPAHFLTFCRITVFSSPEWRHAAEEGRRQAAAEEEAATVTVQRRECGRWPVPGLSSDLVAMARRLGISVVTDSHLLHVAAEALAAPLPAGWSVAAAADGRRCYLHAEAGISRWDHPLDAHYRAI 852
+G+FA+ V DPH+ +L C +A QL G L +F R RG D DG +E +PA F A LA LGLRLDA D +R+L R+ +G G + FL R +S +WR A P D+V MA+ LG+ V +D+ LL +A AL APLP GW + AA DGRR + HAE+G +RWDHPLD +YRA+
Sbjct: 561 FGEFASFVTDPHYADLHARACGALAQQLSVAAQGGALLPLEAIFAPRAPRDDGGGEGTEPLWDDGTRGGTASADDADGAQQETSTSRYMVPAEAFLAGLARLGLRLDARDAKRVLVRYGGAXXXXXXXXXXXXXXXXXLAYGAGGVDVGRFLAAVR----ASRQWRAAXXXXXXXXXXXXXXXXXXXXXXXXAPDP------DVVRMAQCLGLRVRSDAALLWIAEAALTAPLPDGWRICAAPDGRRYFFHAESGTARWDHPLDPYYRAL 820
BLAST of mRNA_P-wetherbeei_contig1341.1.1 vs. uniprot
Match: A0A835YGE3_9CHLO (Aurora kinase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YGE3_9CHLO) HSP 1 Score: 66.6 bits (161), Expect = 1.320e-8 Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 634 PGLSSDLVAMARRLGISVVTDSHLLHVAAEALAAPLPAGWSVAAAADGRRCYLHAEAGISRWDHPLDAHYRA 849
P ++VA + LG+ VV D+ LLH+A AL APLP GW+V +G + +A S ++HP+D HYRA
Sbjct: 1501 PPTQDEIVAYGKYLGMDVVEDAELLHIAEWALTAPLPEGWTVHLDGEGNEFFYNAATNASTYEHPMDEHYRA 1572
BLAST of mRNA_P-wetherbeei_contig1341.1.1 vs. uniprot
Match: A0A2K3DP80_CHLRE (WW domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DP80_CHLRE) HSP 1 Score: 65.5 bits (158), Expect = 3.000e-8 Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 634 PGLSSDLVAMARRLGISVVTDSHLLHVAAEALAAPLPAGWSVAAAADGRRCYLHAEAGISRWDHPLDAHYRA 849
P ++VA + LG+ VV D+ L+H+A AL APLP GW+V +G + +A S ++HP+D HYRA
Sbjct: 983 PPTQEEIVAYGKYLGMDVVEDADLIHIAEWALTAPLPEGWTVHLDGEGNEFFYNAATNASTYEHPMDEHYRA 1054 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1341.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1341.1.1 >prot_P-wetherbeei_contig1341.1.1 ID=prot_P-wetherbeei_contig1341.1.1|Name=mRNA_P-wetherbeei_contig1341.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=278bp MVLRRQAATGRSLLRVFRHFDRSRSGWVGPCDAAEALKDLRIAVPAAGAAback to top mRNA from alignment at P-wetherbeei_contig1341:1079..2395+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1341.1.1 ID=mRNA_P-wetherbeei_contig1341.1.1|Name=mRNA_P-wetherbeei_contig1341.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1317bp|location=Sequence derived from alignment at P-wetherbeei_contig1341:1079..2395+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1341:1079..2395+ >mRNA_P-wetherbeei_contig1341.1.1 ID=mRNA_P-wetherbeei_contig1341.1.1|Name=mRNA_P-wetherbeei_contig1341.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=834bp|location=Sequence derived from alignment at P-wetherbeei_contig1341:1079..2395+ (Phaeothamnion wetherbeei SAG_119_79)back to top |