mRNA_P-wetherbeei_contig1340.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1340.4.1 vs. uniprot
Match: A0A836C989_9STRA (WD40 repeat-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C989_9STRA) HSP 1 Score: 393 bits (1010), Expect = 2.480e-133 Identity = 229/308 (74.35%), Postives = 256/308 (83.12%), Query Frame = 3
Query: 48 MNSVILATAGYDHKIYFWEPPSGVCSRTLRYSDSQVNCLRITPDKHYLAAAGNPNVRLFDINSQNLSPVVAYDGHTTNVTDIGFQKDGKWMYTASEDGTVKIWDLRAPGCQRNYDCGAPVNTVALHPNQQAELVTGDQRGRVKAWDLSASKSADVPTGAASDDLPIQSIAMASDASLLVAANNRGTVFVFDAVGGGGKGYALSRKFKAHDGYLLKCVLGPNVRHLVTTSSDKTAKVWNVGGNWELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRSGEVIRNYVGHSNAVTCVALNDSST 971
MNSVILATAGYDHK+ FWEPPSGVCSRTLRYSDSQVNCLRITPDK +LAAAGNP+VRLF+I SQN +PVVAYDGHTTNVTD+GFQKDGKWM+T SEDG++KIWDLRAPGCQRNY+ APVN VALHPNQ AEL++ SK ++ T D+ PIQSI+ A+DAS++VAA + G VFVF+ G G+ YAL+ FKAH+GYLLKCVL PNVR LVTT SDKTAKVWNVGGNW L+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXELRSGEVIR+Y+GHSNAVTCVALNDSST
Sbjct: 1 MNSVILATAGYDHKVNFWEPPSGVCSRTLRYSDSQVNCLRITPDKQFLAAAGNPHVRLFEIASQNPNPVVAYDGHTTNVTDVGFQKDGKWMFTGSEDGSIKIWDLRAPGCQRNYEAKAPVNAVALHPNQ-AELISXXXXXXXXXXXXXXSKCIEIATNG--DEHPIQSISAATDASVIVAAGSHGRVFVFEP-GRDGRSYALASHFKAHEGYLLKCVLSPNVRQLVTTGSDKTAKVWNVGGNWPLEKTLAQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRSGEVIRHYIGHSNAVTCVALNDSST 304
BLAST of mRNA_P-wetherbeei_contig1340.4.1 vs. uniprot
Match: D7FL41_ECTSI (WD40 repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL41_ECTSI) HSP 1 Score: 317 bits (812), Expect = 2.400e-103 Identity = 204/307 (66.45%), Postives = 234/307 (76.22%), Query Frame = 3
Query: 48 MNSVILATAGYDHKIYFWEPPSGVCSRTLRYSDSQVNCLRITPDKHYLAAAGNPNVRLFDINSQNLSPVVAYDGHTTNVTDIGFQKDGKWMYTASEDGTVKIWDLRAPGCQRNYDCGAPVNTVALHPNQQAELVTGDQRGRVKAWDLSASKSADVPTGAASDDLPIQSIAMASDASLLVAANNRGTVFVFDAVGGGGKGYALSRKFKAHDGYLLKCVLGPNVRHLVTTSSDKTAKVWNVGGNWELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRSGEVIRNYVGHSNAVTCVALNDSS 968
MN VILATAGYDHKI+FWEPPSG C TLR+SDSQVN L+ITPDK YLAAAGNP+VRLF+INSQ S + +YDGH TNVTD+GFQKD KWMYT SEDG +KIWDLRAP CQRNYD G+ V TVALHPNQ AE +A+KS ++ T + PIQS++MA++AS+LV ANN+GTVFVF GG K + + + KAHD YLLKCVL PNV LVTTS+DKT KVW+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RSG I +Y+ H NAVTCVALND++
Sbjct: 1 MNEVILATAGYDHKIHFWEPPSGECRSTLRFSDSQVNSLKITPDKQYLAAAGNPHVRLFEINSQTASALRSYDGHATNVTDVGFQKDAKWMYTGSEDGAIKIWDLRAPSCQRNYDVGSAVTTVALHPNQ-AEXXXXXXXXXXXXXXXTANKSHEIATDGKNH--PIQSLSMATNASVLVGANNKGTVFVFSP-GGDTKSFKKTNEIKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGSCILSYMKHDNAVTCVALNDTT 302
BLAST of mRNA_P-wetherbeei_contig1340.4.1 vs. uniprot
Match: A0A8K1C2K7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2K7_PYTOL) HSP 1 Score: 297 bits (760), Expect = 1.890e-95 Identity = 190/310 (61.29%), Postives = 231/310 (74.52%), Query Frame = 3
Query: 48 MNSVILATAGYDHKIYFWEPPSGVCSRTLRYSDSQVNCLRITPDKHYLAAAGNPNVRLFDINSQNLSPVVAYDGHTTNVTDIGFQKDGKWMYTASEDGTVKIWDLRAPGCQRNYDCGAPVNTVALHPNQQAELVTGDQRGRVKAWDLSASKSADV--PTGAASDDLPIQSIAMASDASLLVAANNRGTVFVFDAVGGGGKGYALSRKFKAHDGYLLKCVLGPNVRHLVTTSSDKTAKVWNVG--GNWELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRSGEVIRNYVGHSNAVTCVALNDS 965
M V+LATAGYDH I FWE SG C+RT++Y+DSQVNCL+ITPDK Y+AAAGNP++RLF+INS N + + +YDGHT+NVT +GFQK GKWMY+ S+DGT+KIWDLRAPGCQRNYD GAP+N+V LHPNQ AELV GDQ G V+ +DL+A+ + P G + I+S+ + D S +VAANN G VF + +GY L KAHD Y+LK + N ++L T SSDKTAK+W++ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L GE IR+Y GH AV CVALNDS
Sbjct: 1 MAGVVLATAGYDHTIRFWEAASGTCNRTVKYADSQVNCLQITPDKKYIAAAGNPHIRLFEINSNNPNHITSYDGHTSNVTSLGFQKHGKWMYSCSDDGTIKIWDLRAPGCQRNYDLGAPLNSVVLHPNQ-AELVVGDQNGCVRVYDLAANTCSFKFSPDG----ETDIRSVDVVRDGSAIVAANNTGKVFFYHPKAS--EGYELQHTLKAHDAYILKTKVSANGKYLATCSSDKTAKIWDIEDRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGQGEAIRHYNGHHKAVICVALNDS 303
BLAST of mRNA_P-wetherbeei_contig1340.4.1 vs. uniprot
Match: A0A2D4BTR3_PYTIN (Target of rapamycin complex subunit LST8 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTR3_PYTIN) HSP 1 Score: 293 bits (750), Expect = 5.520e-94 Identity = 188/309 (60.84%), Postives = 230/309 (74.43%), Query Frame = 3
Query: 48 MNSVILATAGYDHKIYFWEPPSGVCSRTLRYSDSQVNCLRITPDKHYLAAAGNPNVRLFDINSQNLSPVVAYDGHTTNVTDIGFQKDGKWMYTASEDGTVKIWDLRAPGCQRNYDCGAPVNTVALHPNQQAELVTGDQRGRVKAWDLSASKSAD--VPTGAASDDLPIQSIAMASDASLLVAANNRGTVFVFDAVGGGGKGYALSRKFKAHDGYLLKCVLGPNVRHLVTTSSDKTAKVWNVGGN-WELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRSGEVIRNYVGHSNAVTCVALNDS 965
M +V+LATAGYDH I FW+ SG C+RT++Y+DSQVNCL+ITPDK ++AAAGNP++RLF+INS N + V +YDGH+ NV +GFQ+ GKWMY+ SEDGT+KIWDLRAP CQRNYDCG P+N+V LHPNQ AEL+ GDQ G V+ +DL+A+ + VP G ++ I+S+ + D S++VAANN G VF + G + Y L KAHD Y+LK N ++L T SSDKTAKVWN+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L GE IR+Y GH AV CVALNDS
Sbjct: 1 MAAVVLATAGYDHTIRFWDAASGTCNRTVKYADSQVNCLQITPDKKHIAAAGNPHIRLFEINSNNPNHVFSYDGHSGNVMSLGFQRHGKWMYSCSEDGTLKIWDLRAPNCQRNYDCGVPLNSVVLHPNQ-AELIVGDQNGGVRIYDLTANAMSARLVPDG----EVGIRSVDIVRDGSMIVAANNHGNVFFYLP---GKETYELHHTLKAHDAYILKIKTSANGKYLATCSSDKTAKVWNIEEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSQGEAIRHYTGHHKAVVCVALNDS 301
BLAST of mRNA_P-wetherbeei_contig1340.4.1 vs. uniprot
Match: A0A5D6YF95_9STRA (Target of rapamycin complex subunit LST8 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YF95_9STRA) HSP 1 Score: 282 bits (721), Expect = 1.390e-89 Identity = 182/308 (59.09%), Postives = 230/308 (74.68%), Query Frame = 3
Query: 48 MNSVILATAGYDHKIYFWEPPSGVCSRTLRYSDSQVNCLRITPDKHYLAAAGNPNVRLFDINSQNLSPVVAYDGHTTNVTDIGFQKDGKWMYTASEDGTVKIWDLRAPGCQRNYDCGAPVNTVALHPNQQAELVTGDQRGRVKAWDLSASKSADVPTGAASDDLPIQSIAMASDASLLVAANNRGTVFVFDAVGGGGKGYALSRKFKAHDGYLLKCVLGPNVRHLVTTSSDKTAKVWNVGGNWELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELR--SGEVIRNYVGHSNAVTCVALNDS 965
M+ V+LATAGYDH I FWE SG C+RT++++DSQVNCL+I PDK ++AAAG+P++RLF+INS N + V ++DGHT NVT +GFQ+ KW+Y+ S+DGTVKIWDLRAPGCQRNYD G P+N VALHPNQ AEL+ GDQ G V+ +DL+A+ A V + + ++S+ + D S +VAAN+ G VFV A + Y ++ +AHDGY+LKC + N + L T SSDK+AKVW++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SGE IR+Y GH AVTCVALND+
Sbjct: 1 MSGVVLATAGYDHSIRFWEAASGTCNRTVKFADSQVNCLQIAPDKRFIAAAGHPHIRLFEINSNNPNHVTSFDGHTGNVTGVGFQRHSKWIYSCSDDGTVKIWDLRAPGCQRNYDAGVPLNAVALHPNQ-AELLVGDQNGAVRVYDLAAN--ALVTKLSPGGEAGVRSVDVVRDGSAVVAANDEGKVFVLRAKPA--EHYEVAHTLQAHDGYVLKCKVSANGKLLATCSSDKSAKVWSLDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGEAIRHYNGHHKAVTCVALNDA 303
BLAST of mRNA_P-wetherbeei_contig1340.4.1 vs. uniprot
Match: A0A6A7G6M2_9CRUS (WD40 repeat-like superfamily protein n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G6M2_9CRUS) HSP 1 Score: 280 bits (716), Expect = 7.610e-89 Identity = 168/308 (54.55%), Postives = 215/308 (69.81%), Query Frame = 3
Query: 54 SVILATAGYDHKIYFWEPPSGVCSRTLRYSDSQVNCLRITPDKHYLAAAGNPNVRLFDINSQNLSPVVAYDGHTTNVTDIGFQKDGKWMYTASEDGTVKIWDLRAPGCQRNYDCGAPVNTVALHPNQQAELVTGDQRGRVKAWDLSASKSAD--VPTGAASDDLPIQSIAMASDASLLVAANNRGTVFVFDAVGGGGKGYALSRKFKAHDGYLLKCVLGPNVRHLVTTSSDKTAKVWNVGGNWELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRSGEVIRNYVGHSNAVTCVALNDSST 971
SV+L +AGYDH I FWE P+G+C R+L+Y DSQ+N LRITPDK Y+AAA NP+V+LF+IN++N +P+ +++GH+ NVT +GFQKD KWM+TASED +VKIWD+RA GCQR+Y+ AP+N LHPNQ E+ +GD G V WDL+A+ + VP G PI+S+ +ASD S++VAANNRGT+FV+ G + K AH Y LKCVL P+ ++L TTS+DKT K+W+V + L XXXXXXXXXXXXXXXXXXXXXX E I Y GH AVT VALNDSS+
Sbjct: 4 SVVLCSAGYDHTIRFWEAPTGLCYRSLQYDDSQINRLRITPDKQYIAAAANPHVKLFEINAKNPNPLRSFEGHSGNVTALGFQKDNKWMFTASEDASVKIWDVRAAGCQRDYESNAPINDAVLHPNQ-GEIFSGDLDGNVGVWDLTANSCSHQLVPDG----KTPIRSVTIASDGSIVVAANNRGTIFVWKTKNGAQ--FEPVHKIDAHSTYCLKCVLSPDCKYLATTSADKTIKLWSVQDGFSLYKTLEGHTRWVWDXXXXXXXXXXXXXXXXXXXXXXXXXXXEAILEYTGHHKAVTSVALNDSSS 304
BLAST of mRNA_P-wetherbeei_contig1340.4.1 vs. uniprot
Match: K3WT88_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WT88_GLOUD) HSP 1 Score: 277 bits (708), Expect = 1.040e-87 Identity = 184/310 (59.35%), Postives = 222/310 (71.61%), Query Frame = 3
Query: 48 MNSVILATAGYDHKIYFWEPPSGVCSRTLRYSDSQVNCLRITPDKHYLAAAGNPNVRLFDINSQNLSPVVAYDGHTTNVTDIGFQKDGKWMYTASEDGTVKIWDLRAPGCQRNYDCGAPVNTVALHPNQQAELVTGDQRGRVKAWDLSASKSAD--VPTGAASDDLPIQSIAMASDASLLVAANNRGTVFVFDAVGGGGKGYALSRKFKAHDGYLLKCVLGPNVRHLVTTSSDKTAKVWNVGGNWELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE--LRSGEVIRNYVGHSNAVTCVALNDS 965
M V+LATAGYDH I FWE SG C+RT++Y DS ITPDK Y+AAAGNP++RLF+INS N + V +YDGHT NVT +GFQ+ GKWMY+ S+DGT+KIWDLRAPGCQRNYDCG P+N++ LHPNQ AEL+ GDQ G + +DL+A+ + P G A I+S+ + D S +VAANN G VF + + Y L KAHDGY+LKC + N + L T SSDKTAKVW++ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L GE IR+Y GH AV CVALND+
Sbjct: 1 MAGVVLATAGYDHTIRFWEAASGTCNRTVKYPDS------ITPDKKYIAAAGNPHIRLFEINSNNPNHVTSYDGHTGNVTSVGFQRHGKWMYSCSDDGTIKIWDLRAPGCQRNYDCGVPLNSIVLHPNQ-AELLVGDQNGAICFYDLTANAMSTKITPEGEAG----IRSVDIVRDGSAVVAANNEGKVFFYSPKPA--EHYELKHTLKAHDGYILKCKVSANGKLLATCSSDKTAKVWSMDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSQGEAIRHYNGHHKAVICVALNDA 297
BLAST of mRNA_P-wetherbeei_contig1340.4.1 vs. uniprot
Match: A0A662XRD3_9STRA (Target of rapamycin complex subunit LST8 n=5 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XRD3_9STRA) HSP 1 Score: 277 bits (708), Expect = 1.910e-86 Identity = 140/247 (56.68%), Postives = 179/247 (72.47%), Query Frame = 3
Query: 48 MNSVILATAGYDHKIYFWEPPSGVCSRTLRYSDS-----QVNCLRITPDKHYLAAAGNPNVRLFDINSQNLSPVVAYDGHTTNVTDIGFQKDGKWMYTASEDGTVKIWDLRAPGCQRNYDCGAPVNTVALHPNQQAELVTGDQRGRVKAWDLSASKSA---DVPTGAASDDLPIQSIAMASDASLLVAANNRGTVFVFDAVGGGGKGYALSRKFKAHDGYLLKCVLGPNVRHLVTTSSDKTAKVWNV 764
M V+LATAGYDH I FWE SG C+RT++Y DS QVNCL+ITPDK Y+AAAGNP++RLF+INS N + V +YDGH +NVT +GFQ+ GKWMY+ S+D T+KIWDLRAPGCQR+YD G P+N+V LHPNQ AEL+ GDQ G V+ +DL+A+ A + PTG A + I+S+A+ D S LVAANN+G F + G Y L R +AH+GY+LKC + N + L T SSDKTAKVW++
Sbjct: 22 MAGVVLATAGYDHTIRFWEAASGTCNRTVKYPDSVRSLSQVNCLQITPDKKYIAAAGNPHIRLFEINSNNPNHVTSYDGHASNVTSLGFQRHGKWMYSCSDDNTIKIWDLRAPGCQRSYDAGVPLNSVVLHPNQ-AELLVGDQNGCVRVYDLTANAMAAKLEPPTGDAGES-GIRSVAVVPDGSALVAANNQGKCFFYRPEAEGH--YGLHRTLQAHNGYILKCRVSANGKFLATCSSDKTAKVWSL 264
BLAST of mRNA_P-wetherbeei_contig1340.4.1 vs. uniprot
Match: A0A024GH24_9STRA (Target of rapamycin complex subunit LST8 n=3 Tax=Albugo TaxID=65356 RepID=A0A024GH24_9STRA) HSP 1 Score: 275 bits (704), Expect = 1.980e-86 Identity = 157/353 (44.48%), Postives = 193/353 (54.67%), Query Frame = 3
Query: 48 MNSVILATAGYDHKIYFWEPPSGVCSRTLRYSDSQVNCLRITPDKHYLAAAGNPNVRLFDINSQNLSPVVAYDGHTTNVTDIGFQKDGKWMYTASEDGTVKIWDLRAPGCQRNYDCGA--------------------------PVNTVALHPNQQAELVTGDQRGRVKAWDLSASKSADV--PTGAASDDLPIQSIAMASDASLLVAANNRGTVFVFDAVGGGGKGYALSRKFKAHDGYLLKCVLGPNVRHLVTTSSDKTAKVWNVG-------------------GNWELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRSGEVIRNYVGHSNAVTCVALNDS 965
M V+LATAGYDH I FWE SG C+RT++YSDSQVNCL ITPDK+Y+ AAGNP++RLF+INS N + V YDGH NVT +GFQ+ GKWMYT+SEDGT+KIWDLRA G QR+Y+C P+N+ ALHPNQ AE+ DQ G ++ +DL+A DV P G D I+S+ + D SLLVAANNRG F + GG Y L +AH+GY+LKC N R L T SSDKTAK+WN+ +EL +L GE +R+Y GH AV CVALNDS
Sbjct: 1 MTGVVLATAGYDHTIRFWEAASGTCNRTVKYSDSQVNCLNITPDKNYITAAGNPHIRLFEINSNNPNAVSTYDGHNGNVTSLGFQQQGKWMYTSSEDGTLKIWDLRATGFQRSYECSTFAPGKKAGHSSNANSSGNSSTTSGLIPLNSAALHPNQ-AEVFVADQNGAIRVFDLTADSCVDVLIPDG----DCGIKSLDIVKDGSLLVAANNRGKCFFYQPNSGGR--YELFHTLQAHNGYILKCQTSSNGRLLATCSSDKTAKIWNIEPKSQSDPTIVEDVNETSRVAQFELIRTLQGHQRWVWDCAFSAVSSYLVTCSSDQSARLWDLCQGEAVRHYNGHHKAVICVALNDS 346
BLAST of mRNA_P-wetherbeei_contig1340.4.1 vs. uniprot
Match: A0A4D9DF34_9STRA (Target of rapamycin complex subunit LST8 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DF34_9STRA) HSP 1 Score: 275 bits (702), Expect = 2.710e-86 Identity = 181/342 (52.92%), Postives = 234/342 (68.42%), Query Frame = 3
Query: 51 NSVILATAGYDHKIYFWEPPSGVCSRTLRYSDSQVNCLRITPDKHYLAAAGNPNVRLFDINSQ-NLSPVVAYDGHTTNVTDIGFQKDGKWMYTASEDGTVKIWDLRAPGCQRNYDCGAP---------------------------VNTVALHPNQQAELVTGDQRGRVKAWDLSASKSAD--VPTGAASDDLPIQSIAMASDASLLVAANNRGTVFVFDAVGGGGKGYALSRKF-----KAHDGYLLKCVLGPNVRHLVTTSSDKTAKVWNVGGNWELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRSGEVIRNYVGHSNAVTCVALNDSST 971
++V+LATAGYDHKI FWE P+GVC+R++RY DSQVNCL+ITPDK +LAA GNP+VRLF++ N +PVV+Y+GH NV +GFQ++GKW+YTASEDGTVK+WD+RA GCQR + VN+V LHPNQ AELVTGDQ GRV+ WDL +++ +P G+ +P++S+++A+DASL+ A NN+ ++V+ G Y SR K H +LLKC P+ + LVTTS+DKTAK+WNV WE++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+++R Y G + AVTCVALND+ T
Sbjct: 3 SAVVLATAGYDHKIRFWEAPTGVCARSIRYPDSQVNCLQITPDKQFLAAGGNPHVRLFEVGGNANPNPVVSYEGHAGNVMSVGFQQEGKWLYTASEDGTVKLWDIRASGCQRTLENSTATXXXXXXXXXXXXXXXXXGHQHTSMVAVNSVVLHPNQ-AELVTGDQEGRVRVWDLGSNRCVHETLPEGS----VPVRSVSVANDASLIAAGNNQANLYVWHYQEGSPDAY-FSRPVHVQPVKTHARFLLKCAFSPDSQRLVTTSADKTAKLWNVR-KWEVEHTLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLVRTYQGSNLAVTCVALNDAQT 337 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1340.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1340.4.1 >prot_P-wetherbeei_contig1340.4.1 ID=prot_P-wetherbeei_contig1340.4.1|Name=mRNA_P-wetherbeei_contig1340.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=309bp MNSVILATAGYDHKIYFWEPPSGVCSRTLRYSDSQVNCLRITPDKHYLAAback to top mRNA from alignment at P-wetherbeei_contig1340:4026..5974+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1340.4.1 ID=mRNA_P-wetherbeei_contig1340.4.1|Name=mRNA_P-wetherbeei_contig1340.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1949bp|location=Sequence derived from alignment at P-wetherbeei_contig1340:4026..5974+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1340:4026..5974+ >mRNA_P-wetherbeei_contig1340.4.1 ID=mRNA_P-wetherbeei_contig1340.4.1|Name=mRNA_P-wetherbeei_contig1340.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=927bp|location=Sequence derived from alignment at P-wetherbeei_contig1340:4026..5974+ (Phaeothamnion wetherbeei SAG_119_79)back to top |