mRNA_P-wetherbeei_contig13380.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13380.2.1
Unique NamemRNA_P-wetherbeei_contig13380.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13380.2.1 vs. uniprot
Match: A0A351A027_9RHOO (Metal ABC transporter permease (Fragment) n=1 Tax=Thauera sp. TaxID=1905334 RepID=A0A351A027_9RHOO)

HSP 1 Score: 647 bits (1668), Expect = 2.420e-230
Identity = 334/380 (87.89%), Postives = 356/380 (93.68%), Query Frame = 1
Query:    1 ICSQAFSELREIVFARVAHQAMHQVALETFEHLHRLSLRFHLDRQTGGLNRAIERGTAGIENLLHFMLFQAVVPTVLEITLVCGTLWYIYDWRFAAVTLVTIVLYVAYTFAVTAWRLRYRRAMLEAEGEASTKAIDSLLNYETVKYFGNEAHEAKRFDKSLDAYERAAVLSKTSLSILNVGQGFVIAIGLTAMMMLAAFDVAAGAMTVGGFVMVNAYLIQLYLPLNFLGMVYREIRQALIDMQSMFKLLHANAEIVDDPAAPELKVTGAHVRFEGVTFGYDARRTILDGVDLDVPPGKTLAIVGSSGAGKSTISRLLFRFYDVTAGAITIDGQDIRNVTQGSVRAAIGIVPQDTVLFNDTIYYNIAYGRPSATTEEVEDA 1140
            + SQ F+ELREIVFARVAHQAMHQVALETF+HLHRLSLRFHLDRQTGGLNRAIERGTAGIENLLHFMLFQ +VPT+LEI +VCG LWY+YDWRFAAVT VTIVLYV YTFA+TAWRLRYRRAMLEAEGEASTKA+DSLLNYETVKYFGNEAHEAKRFDKSLDAYERAAVLSKTSLS+LNVGQGFVIAIGLT +M+LAAFDVAAGAMTVGGFVMVNAYLIQLYLPLNFLGMVYRE+RQALIDMQSMF+LL ANAEIVD P AP+LKV GA V FE V FGYD RR ILDG+D+DV PG TLAIVG+SGAGKSTISRLLFRFYDVT GA+ IDGQD+R+VTQ SVRAAIGIVPQDTVLFNDTIYYNIAYGRPSAT EEVE+A
Sbjct:    1 VFSQVFTELREIVFARVAHQAMHQVALETFQHLHRLSLRFHLDRQTGGLNRAIERGTAGIENLLHFMLFQ-IVPTLLEIAMVCGMLWYLYDWRFAAVTFVTIVLYVGYTFAITAWRLRYRRAMLEAEGEASTKAVDSLLNYETVKYFGNEAHEAKRFDKSLDAYERAAVLSKTSLSLLNVGQGFVIAIGLTLVMLLAAFDVAAGAMTVGGFVMVNAYLIQLYLPLNFLGMVYREVRQALIDMQSMFRLLLANAEIVDRPGAPDLKVDGARVTFEKVDFGYDPRRPILDGIDIDVAPGTTLAIVGASGAGKSTISRLLFRFYDVTGGAVKIDGQDLRDVTQASVRAAIGIVPQDTVLFNDTIYYNIAYGRPSATKEEVEEA 379          
BLAST of mRNA_P-wetherbeei_contig13380.2.1 vs. uniprot
Match: A0A255XL02_9PROT (Metal ABC transporter permease n=1 Tax=Elstera cyanobacteriorum TaxID=2022747 RepID=A0A255XL02_9PROT)

HSP 1 Score: 501 bits (1289), Expect = 4.340e-172
Identity = 261/380 (68.68%), Postives = 302/380 (79.47%), Query Frame = 1
Query:    1 ICSQAFSELREIVFARVAHQAMHQVALETFEHLHRLSLRFHLDRQTGGLNRAIERGTAGIENLLHFMLFQAVVPTVLEITLVCGTLWYIYDWRFAAVTLVTIVLYVAYTFAVTAWRLRYRRAMLEAEGEASTKAIDSLLNYETVKYFGNEAHEAKRFDKSLDAYERAAVLSKTSLSILNVGQGFVIAIGLTAMMMLAAFDVAAGAMTVGGFVMVNAYLIQLYLPLNFLGMVYREIRQALIDMQSMFKLLHANAEIVDDPAAPELKVTGAHVRFEGVTFGYDARRTILDGVDLDVPPGKTLAIVGSSGAGKSTISRLLFRFYDVTAGAITIDGQDIRNVTQGSVRAAIGIVPQDTVLFNDTIYYNIAYGRPSATTEEVEDA 1140
            + SQAF ELR+ VFA+VA +A+ +V LETF HLH LSLRFHLDRQTGGL+RAIERGT GIE LL FMLF  V+PT+LEI LVCG LW +Y   FAA+T VTI+ Y+A+T  +T WR +YRR M + + EA+TKA+DSLLNYETVKYFGNEAHEA+RFD +L AYE AAV S+TSLS LN+GQG +IAIGL A+M L A  VA G MTVG  V+VN +LIQLYLPLNFLG VYR+IRQ+LIDM+ MF LL    E+ D P A  L + G  VRFE V FGYD RR IL GV+  +P GKTLA+VGSSGAGKST+SRLL+RFYDVT GAI IDGQDIR V QG++RAAIGIVPQDTVLFNDTIYYNI YGRP A   EVE+A
Sbjct:   48 VLSQAFGELRDAVFAKVAQRAIRRVGLETFRHLHALSLRFHLDRQTGGLSRAIERGTKGIEFLLQFMLFN-VLPTLLEIVLVCGILWNLYSIEFAAITFVTIIGYIAFTILMTEWRSKYRREMNDRDSEATTKAVDSLLNYETVKYFGNEAHEARRFDSALQAYESAAVRSQTSLSALNIGQGTIIAIGLIAVMTLTAQGVAKGTMTVGDLVLVNGFLIQLYLPLNFLGFVYRQIRQSLIDMEQMFSLLRVEREVADSPDAQPLALNGGEVRFEAVDFGYDPRRPILHGVNFTIPAGKTLAVVGSSGAGKSTLSRLLYRFYDVTGGAIRIDGQDIRQVKQGTLRAAIGIVPQDTVLFNDTIYYNILYGRPDAAPAEVEEA 426          
BLAST of mRNA_P-wetherbeei_contig13380.2.1 vs. uniprot
Match: UPI00115C99F9 (ABC transporter ATP-binding protein/permease n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115C99F9)

HSP 1 Score: 499 bits (1285), Expect = 7.380e-171
Identity = 260/380 (68.42%), Postives = 307/380 (80.79%), Query Frame = 1
Query:    1 ICSQAFSELREIVFARVAHQAMHQVALETFEHLHRLSLRFHLDRQTGGLNRAIERGTAGIENLLHFMLFQAVVPTVLEITLVCGTLWYIYDWRFAAVTLVTIVLYVAYTFAVTAWRLRYRRAMLEAEGEASTKAIDSLLNYETVKYFGNEAHEAKRFDKSLDAYERAAVLSKTSLSILNVGQGFVIAIGLTAMMMLAAFDVAAGAMTVGGFVMVNAYLIQLYLPLNFLGMVYREIRQALIDMQSMFKLLHANAEIVDDPAAPELKVTGAHVRFEGVTFGYDARRTILDGVDLDVPPGKTLAIVGSSGAGKSTISRLLFRFYDVTAGAITIDGQDIRNVTQGSVRAAIGIVPQDTVLFNDTIYYNIAYGRPSATTEEVEDA 1140
            + SQAF ELR+ VF +VA +A+  VAL+TF HLH L+LRFHLDRQTGG++RAIERGT GIE LL+FMLF  ++PT+LE+ +VCG LWY++D+RFA VTLVTI  Y+A+T  VT WRL+YRR M E + EASTKAIDSLLNYETVKYFGNE HEA+R+DKSL  YE AAV SKT+LS+LN+GQG +I++GL  +M++AA  V AG MT+G FV+VN YLIQLYLPLNFLG VYREI+Q+L DM+ MF LL  NAEI D P AP+LK+ GA + FE V F Y+  R IL G+   VP GKT+A+VG SGAGKSTISRLLFRFYDV +G I IDGQDIR V Q S+RAAIGIVPQDTVLFNDTI YNIAYGRP AT EEVE A
Sbjct:   95 VASQAFGELRDAVFVKVAQRAIRTVALQTFRHLHGLALRFHLDRQTGGISRAIERGTKGIEFLLNFMLFN-ILPTLLEVLMVCGILWYLFDFRFALVTLVTISGYIAFTLLVTEWRLKYRRTMNETDQEASTKAIDSLLNYETVKYFGNEEHEARRYDKSLQRYEGAAVKSKTTLSMLNIGQGAIISVGLIVVMLMAAEGVVAGHMTIGDFVLVNTYLIQLYLPLNFLGFVYREIKQSLTDMEHMFHLLGENAEIRDKPGAPDLKMEGAALTFENVHFSYNPDREILKGISFSVPAGKTVALVGPSGAGKSTISRLLFRFYDVDSGRILIDGQDIREVRQASLRAAIGIVPQDTVLFNDTIAYNIAYGRPGATREEVEKA 473          
BLAST of mRNA_P-wetherbeei_contig13380.2.1 vs. uniprot
Match: A0A545T7X9_9PROT (ABC transporter ATP-binding protein/permease n=2 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545T7X9_9PROT)

HSP 1 Score: 496 bits (1278), Expect = 1.770e-169
Identity = 260/380 (68.42%), Postives = 307/380 (80.79%), Query Frame = 1
Query:    1 ICSQAFSELREIVFARVAHQAMHQVALETFEHLHRLSLRFHLDRQTGGLNRAIERGTAGIENLLHFMLFQAVVPTVLEITLVCGTLWYIYDWRFAAVTLVTIVLYVAYTFAVTAWRLRYRRAMLEAEGEASTKAIDSLLNYETVKYFGNEAHEAKRFDKSLDAYERAAVLSKTSLSILNVGQGFVIAIGLTAMMMLAAFDVAAGAMTVGGFVMVNAYLIQLYLPLNFLGMVYREIRQALIDMQSMFKLLHANAEIVDDPAAPELKVTGAHVRFEGVTFGYDARRTILDGVDLDVPPGKTLAIVGSSGAGKSTISRLLFRFYDVTAGAITIDGQDIRNVTQGSVRAAIGIVPQDTVLFNDTIYYNIAYGRPSATTEEVEDA 1140
            I   AF+++R+ VF++VA  A+ QVAL+TFEHLHRLSLRFHLDRQTGGL RAI+RGT GIE LL F+LF  ++PT+LEI  V G LWY++DWRFAAVTLVTI+LYV  TF +T WR++ RR M +A+ +A+TK+IDSLLN+ETVKYFGNE HE +RFD +L +YE+AAV S+ SLS LN GQ  VI+IG+ A+M++AA  V AG MT+G FVMVNAYLIQL +PLN LG VYREI+Q+LIDM+ MF LLH  AEI+D P A  L   G  V F  V+FGYDARR IL GVD  VP GKT+AIVG SGAGKSTISRLLFRFYDVT G I IDGQD+R VTQ S+RA+IGIVPQDTVLFNDT+YYNIAYGRPSAT EEVE A
Sbjct:  107 ILGVAFAQVRDAVFSKVAQHAIRQVALQTFEHLHRLSLRFHLDRQTGGLTRAIDRGTKGIEFLLFFVLFN-ILPTILEILFVSGILWYLFDWRFAAVTLVTILLYVFLTFVITEWRIKLRRRMNDADNDANTKSIDSLLNFETVKYFGNERHETRRFDTALQSYEKAAVDSRVSLSALNSGQAIVISIGVVAIMVMAAMGVVAGVMTLGDFVMVNAYLIQLAMPLNLLGTVYREIKQSLIDMEVMFNLLHTGAEILDRPDAKPLLPEGGEVVFRNVSFGYDARRPILRGVDFTVPAGKTVAIVGPSGAGKSTISRLLFRFYDVTEGQILIDGQDLRAVTQDSLRASIGIVPQDTVLFNDTVYYNIAYGRPSATREEVEAA 485          
BLAST of mRNA_P-wetherbeei_contig13380.2.1 vs. uniprot
Match: UPI0019E4F205 (ABC transporter ATP-binding protein/permease n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019E4F205)

HSP 1 Score: 488 bits (1256), Expect = 2.050e-166
Identity = 251/378 (66.40%), Postives = 304/378 (80.42%), Query Frame = 1
Query:    7 SQAFSELREIVFARVAHQAMHQVALETFEHLHRLSLRFHLDRQTGGLNRAIERGTAGIENLLHFMLFQAVVPTVLEITLVCGTLWYIYDWRFAAVTLVTIVLYVAYTFAVTAWRLRYRRAMLEAEGEASTKAIDSLLNYETVKYFGNEAHEAKRFDKSLDAYERAAVLSKTSLSILNVGQGFVIAIGLTAMMMLAAFDVAAGAMTVGGFVMVNAYLIQLYLPLNFLGMVYREIRQALIDMQSMFKLLHANAEIVDDPAAPELKVTGAHVRFEGVTFGYDARRTILDGVDLDVPPGKTLAIVGSSGAGKSTISRLLFRFYDVTAGAITIDGQDIRNVTQGSVRAAIGIVPQDTVLFNDTIYYNIAYGRPSATTEEVEDA 1140
            S AF ELR+ VFA+VA +AM   AL+TFEHLH LSLR+HLDRQTGGL+R IERG +G+E LL+FM+F  +VPT+LEI LVCG LW ++DWRFAAVT VTI  Y+A++  VT WR++YRR M E + EA+TKA+DSLLN+ETVKYFGNEAHE++R+D +L  YERAA+ SK SL++LN+GQ  +IAIGL A+  +AA  V AG +TVG FV+VNAYL+QLY+PLNFLG VYR+IRQ+L DM +M+ LL  + EI D P AP L V G  + F+ V FGYD RR IL  V   VPPGKT+AIVG SGAGKSTISR+LFRFYDV  GA+ IDGQDIR+VTQ S+RAAIGIVPQDTVLFNDTIYYNIAYGRP A+  E+E+A
Sbjct:   95 SVAFGELRDAVFAKVAQRAMRTSALKTFEHLHALSLRYHLDRQTGGLSRVIERGISGVEFLLNFMVFN-IVPTILEILLVCGILWAMFDWRFAAVTGVTIFGYIAFSLLVTEWRIKYRREMNERDTEANTKAVDSLLNFETVKYFGNEAHESRRYDSALKMYERAAIRSKISLAMLNIGQAGIIAIGLVALNAMAALGVIAGTLTVGDFVLVNAYLMQLYMPLNFLGFVYRQIRQSLTDMDAMYGLLKVDREIADKPDAPALAVNGGEIVFDSVNFGYDERRPILRDVGFTVPPGKTVAIVGPSGAGKSTISRILFRFYDVVEGAVRIDGQDIRDVTQESLRAAIGIVPQDTVLFNDTIYYNIAYGRPDASPAEIEEA 471          
BLAST of mRNA_P-wetherbeei_contig13380.2.1 vs. uniprot
Match: A0A1C3RKE9_9PROT (ATP-binding cassette subfamily B n=2 Tax=Terasakiella TaxID=196080 RepID=A0A1C3RKE9_9PROT)

HSP 1 Score: 486 bits (1252), Expect = 8.250e-166
Identity = 244/380 (64.21%), Postives = 306/380 (80.53%), Query Frame = 1
Query:    1 ICSQAFSELREIVFARVAHQAMHQVALETFEHLHRLSLRFHLDRQTGGLNRAIERGTAGIENLLHFMLFQAVVPTVLEITLVCGTLWYIYDWRFAAVTLVTIVLYVAYTFAVTAWRLRYRRAMLEAEGEASTKAIDSLLNYETVKYFGNEAHEAKRFDKSLDAYERAAVLSKTSLSILNVGQGFVIAIGLTAMMMLAAFDVAAGAMTVGGFVMVNAYLIQLYLPLNFLGMVYREIRQALIDMQSMFKLLHANAEIVDDPAAPELKVTGAHVRFEGVTFGYDARRTILDGVDLDVPPGKTLAIVGSSGAGKSTISRLLFRFYDVTAGAITIDGQDIRNVTQGSVRAAIGIVPQDTVLFNDTIYYNIAYGRPSATTEEVEDA 1140
            + +QAF ELR+ VFARVA +A+  VAL+TFEHLHRL+LRFH+ RQTGGL R+IERGT GI+ LL+FMLF  ++PT+LEI LVCG LW +YDW FA VT  TI  Y+A+T  VT WR++YRR M +++ EA+TKA+DSLLN+ETVKYF NE HEA+R+D +L ++E A++ SK +LS+LN+GQG +I++GLTA+M++A + V  G+MT+G FV+VN+YLIQLY+PLNFLG VYREI+Q+L DM+ MF LL   AEI DDP A +L V G  V FE V+F YDARR IL GVD  VP GKT AIVG+SGAGKST+SRLLFRFYDV+ GA+ IDG DIR + Q ++R AIGIVPQDTVLFNDT++YNIAYGRP AT  +VE A
Sbjct:   92 VMAQAFGELRDAVFARVAQRAIRDVALKTFEHLHRLALRFHVQRQTGGLTRSIERGTKGIDFLLNFMLFN-ILPTLLEIVLVCGILWVLYDWTFAVVTFGTIASYIAWTLIVTEWRIKYRRTMNKSDNEANTKAVDSLLNFETVKYFTNEQHEARRYDVALKSFEEASIKSKVTLSLLNIGQGAIISVGLTAVMVMAGYGVQDGSMTLGDFVLVNSYLIQLYMPLNFLGFVYREIKQSLTDMEHMFSLLDQEAEIADDPEAKDLPVGGGEVVFENVSFAYDARRPILKGVDFKVPAGKTTAIVGASGAGKSTLSRLLFRFYDVSEGAVKIDGADIRTIKQNALRGAIGIVPQDTVLFNDTVFYNIAYGRPDATPADVEKA 470          
BLAST of mRNA_P-wetherbeei_contig13380.2.1 vs. uniprot
Match: A0A2D9F124_9PROT (Metal ABC transporter permease n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9F124_9PROT)

HSP 1 Score: 486 bits (1252), Expect = 9.090e-166
Identity = 247/380 (65.00%), Postives = 303/380 (79.74%), Query Frame = 1
Query:    1 ICSQAFSELREIVFARVAHQAMHQVALETFEHLHRLSLRFHLDRQTGGLNRAIERGTAGIENLLHFMLFQAVVPTVLEITLVCGTLWYIYDWRFAAVTLVTIVLYVAYTFAVTAWRLRYRRAMLEAEGEASTKAIDSLLNYETVKYFGNEAHEAKRFDKSLDAYERAAVLSKTSLSILNVGQGFVIAIGLTAMMMLAAFDVAAGAMTVGGFVMVNAYLIQLYLPLNFLGMVYREIRQALIDMQSMFKLLHANAEIVDDPAAPELKVTGAHVRFEGVTFGYDARRTILDGVDLDVPPGKTLAIVGSSGAGKSTISRLLFRFYDVTAGAITIDGQDIRNVTQGSVRAAIGIVPQDTVLFNDTIYYNIAYGRPSATTEEVEDA 1140
            + SQAF ELR+ +FA+VA +A+    L+TF HLH+LSLRFHLDR+TGG++RA+ERGT GI+ LL FMLF  +VPT+ EI L CG LWY++    A VT VTI LY+A+T  VT WR+++RR M + + EA+TKAIDSLLN+ETVKYFGNE HE +RFDK+L  YE AAV S TSL++LN+GQG +I++GLT MM +AA  VAAG MT+G F MVNAYLIQLY+PLNFLG VYREI+Q+LIDM+ MF+LL   AE+ D P AP L + GA VRFE V+F YDARR +L  V   VP GKT+AIVG SG+GKSTISRLLFRFYDV+ G + +DGQD+R+VTQ S+RAAIG+VPQDTVLFNDTI+YNIAYGRP A+  EVE A
Sbjct:   90 VLSQAFGELRDAIFAKVAQRAIRLAGLKTFRHLHQLSLRFHLDRKTGGVSRAVERGTKGIDFLLRFMLFN-IVPTLFEIGLTCGILWYLFGPLMAGVTFVTIALYIAWTLWVTEWRIQFRRTMNQTDNEANTKAIDSLLNFETVKYFGNEDHEGRRFDKALARYEDAAVKSNTSLAMLNIGQGLIISVGLTIMMWMAAAGVAAGTMTIGDFAMVNAYLIQLYMPLNFLGFVYREIKQSLIDMEHMFRLLDVEAEVADKPDAPALNLDGAEVRFENVSFAYDARRPVLQDVSFTVPAGKTVAIVGPSGSGKSTISRLLFRFYDVSGGRVAVDGQDVRDVTQESLRAAIGMVPQDTVLFNDTIFYNIAYGRPGASPAEVEAA 468          
BLAST of mRNA_P-wetherbeei_contig13380.2.1 vs. uniprot
Match: A0A178MMS9_9PROT (Metal ABC transporter permease n=2 Tax=Magnetospirillum TaxID=13134 RepID=A0A178MMS9_9PROT)

HSP 1 Score: 486 bits (1250), Expect = 1.280e-165
Identity = 254/375 (67.73%), Postives = 303/375 (80.80%), Query Frame = 1
Query:   16 FSELREIVFARVAHQAMHQVALETFEHLHRLSLRFHLDRQTGGLNRAIERGTAGIENLLHFMLFQAVVPTVLEITLVCGTLWYIYDWRFAAVTLVTIVLYVAYTFAVTAWRLRYRRAMLEAEGEASTKAIDSLLNYETVKYFGNEAHEAKRFDKSLDAYERAAVLSKTSLSILNVGQGFVIAIGLTAMMMLAAFDVAAGAMTVGGFVMVNAYLIQLYLPLNFLGMVYREIRQALIDMQSMFKLLHANAEIVDDPAAPELKVTGAHVRFEGVTFGYDARRTILDGVDLDVPPGKTLAIVGSSGAGKSTISRLLFRFYDVTAGAITIDGQDIRNVTQGSVRAAIGIVPQDTVLFNDTIYYNIAYGRPSATTEEVEDA 1140
            F+E R+I FARV   A+  V L+ F HLHRL+LRFHLDRQTGG++RAIERGT GIE LL+FMLF  ++PT+LEI LV   LW +YD RFA VT  TI LY+ YT  VT WR ++RRAM E + EASTKAIDSLLN+ETVKYF NEAHEA+R+D++L  YE AAV SK +L++LN+GQG +IA+GLT +M++AA  VA G+MT+G FV+VNAYL+QLYLPLNFLG VYREI+Q+L DM++MF+LL  NAEI D+  A +LKV G  VRF+ V+FGYD  R ILD VD  VP G+T+AIVG SGAGKSTISRLLFRFYDVT G ITIDGQDIR VTQ S+RAAIGIVPQDTVLFNDTI YNIAYG+P AT +E+E A
Sbjct:   96 FAEARDIAFARVGQAAIRAVGLKVFRHLHRLALRFHLDRQTGGVSRAIERGTKGIEFLLNFMLFN-ILPTLLEIGLVTIVLWQMYDARFALVTFGTIALYITYTLTVTEWRTKFRRAMNETDSEASTKAIDSLLNFETVKYFCNEAHEAERYDRALGRYEAAAVKSKVTLALLNMGQGAIIALGLTVVMIMAAQGVADGSMTMGDFVLVNAYLVQLYLPLNFLGFVYREIKQSLTDMEAMFRLLEQNAEIRDEDGAADLKVNGGEVRFQAVSFGYDPERRILDNVDFTVPAGRTVAIVGPSGAGKSTISRLLFRFYDVTGGWITIDGQDIRQVTQSSLRAAIGIVPQDTVLFNDTIRYNIAYGKPGATQDEIEAA 469          
BLAST of mRNA_P-wetherbeei_contig13380.2.1 vs. uniprot
Match: A0A2A5DX77_9PROT (Metal ABC transporter permease n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2A5DX77_9PROT)

HSP 1 Score: 485 bits (1248), Expect = 1.860e-165
Identity = 254/378 (67.20%), Postives = 300/378 (79.37%), Query Frame = 1
Query:    7 SQAFSELREIVFARVAHQAMHQVALETFEHLHRLSLRFHLDRQTGGLNRAIERGTAGIENLLHFMLFQAVVPTVLEITLVCGTLWYIYDWRFAAVTLVTIVLYVAYTFAVTAWRLRYRRAMLEAEGEASTKAIDSLLNYETVKYFGNEAHEAKRFDKSLDAYERAAVLSKTSLSILNVGQGFVIAIGLTAMMMLAAFDVAAGAMTVGGFVMVNAYLIQLYLPLNFLGMVYREIRQALIDMQSMFKLLHANAEIVDDPAAPELKVTGAHVRFEGVTFGYDARRTILDGVDLDVPPGKTLAIVGSSGAGKSTISRLLFRFYDVTAGAITIDGQDIRNVTQGSVRAAIGIVPQDTVLFNDTIYYNIAYGRPSATTEEVEDA 1140
            S  F E+R  +FA+VA +A+  VAL+TF H+HRLSLRFHL+RQTGG+NRAIERGT GIE LL F++F  VVPT +EI LVCG LW ++D RFAAVT VTI  YVA+T  VT WR +YRR M EA+ EA+TKAIDSLLNYETVKYFGNE HEAKRFD+SL +YERAAV SKTSLS+LNVGQ  +++IG+T +M+LA   +  G++T+G FV+VN YLIQLY+PLNFLG VYREI+Q+L DM+SMF LL    E+ D P A  L VT   +RFE V F YD+RR IL  +   VP GKT+AIVG SGAGKST+SRLLFRFYDV  G ITIDGQDIR V+Q S+RAAIGIVPQDTVLFNDTI+YNIAYGRP A   EVE+A
Sbjct:   93 SLVFGEIRNAIFAKVAQRAIRAVALKTFSHIHRLSLRFHLERQTGGVNRAIERGTKGIEFLLTFVIFN-VVPTFIEIFLVCGILWVLFDIRFAAVTFVTISGYVAFTLFVTEWRTKYRRIMNEADSEANTKAIDSLLNYETVKYFGNEEHEAKRFDRSLQSYERAAVKSKTSLSLLNVGQAAIVSIGVTLVMILAGLGIVDGSLTIGDFVLVNTYLIQLYMPLNFLGSVYREIKQSLTDMESMFALLRVAPEVQDKPDAASLCVTKGEIRFENVEFDYDSRRKILKNISFTVPEGKTVAIVGPSGAGKSTLSRLLFRFYDVDRGRITIDGQDIRKVSQKSLRAAIGIVPQDTVLFNDTIFYNIAYGRPGADLAEVEEA 469          
BLAST of mRNA_P-wetherbeei_contig13380.2.1 vs. uniprot
Match: A0A5C7NWL8_9PROT (ABC transporter ATP-binding protein/permease n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A5C7NWL8_9PROT)

HSP 1 Score: 485 bits (1248), Expect = 3.220e-165
Identity = 253/380 (66.58%), Postives = 302/380 (79.47%), Query Frame = 1
Query:    1 ICSQAFSELREIVFARVAHQAMHQVALETFEHLHRLSLRFHLDRQTGGLNRAIERGTAGIENLLHFMLFQAVVPTVLEITLVCGTLWYIYDWRFAAVTLVTIVLYVAYTFAVTAWRLRYRRAMLEAEGEASTKAIDSLLNYETVKYFGNEAHEAKRFDKSLDAYERAAVLSKTSLSILNVGQGFVIAIGLTAMMMLAAFDVAAGAMTVGGFVMVNAYLIQLYLPLNFLGMVYREIRQALIDMQSMFKLLHANAEIVDDPAAPELKVTGAHVRFEGVTFGYDARRTILDGVDLDVPPGKTLAIVGSSGAGKSTISRLLFRFYDVTAGAITIDGQDIRNVTQGSVRAAIGIVPQDTVLFNDTIYYNIAYGRPSATTEEVEDA 1140
            + SQAF+ELR+ +FA+VA +A+ +VAL+TF HLH LSL+FHLDRQTGGL+RAIERG  GIE LL F+LF  V+PT+LEI LVC  LW +YDWRFAA+T  TI LY+ YT  VT WR++YRR M E++  A+TKA+DSLLNYETVKYF NEAHE++R+D +L  YE AAV S+TSL+ LN+GQ F+IA G+T MM LAA  V    +TVG FV+VNAYLIQLYLPLNFLG VYREIRQ+LIDM++MF LL  + +I D P AP L++    V FE V FGYD RR IL GV   V PG+TLAIVG SGAGKSTISRLLFRFYDV  G +TIDGQD+R+V Q SVRAAIGIVPQDTVLFNDT+ YNIAYGRP A+  E+E+A
Sbjct:   88 VLSQAFAELRDGIFAKVAQRAIREVALDTFRHLHALSLKFHLDRQTGGLSRAIERGAKGIEFLLFFILFN-VLPTLLEIALVCIILWKLYDWRFAAITATTIGLYIWYTLMVTEWRIKYRRVMNESDQAANTKAVDSLLNYETVKYFNNEAHESRRYDVALKVYEEAAVKSRTSLATLNIGQAFIIATGVTLMMALAASGVVDKHLTVGDFVLVNAYLIQLYLPLNFLGTVYREIRQSLIDMEAMFALLLVDVDIADRPGAPPLQIAAGSVAFENVYFGYDPRRPILKGVSFKVEPGRTLAIVGPSGAGKSTISRLLFRFYDVQDGRVTIDGQDLRDVQQQSVRAAIGIVPQDTVLFNDTVEYNIAYGRPGASRAEIEEA 466          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13380.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A351A027_9RHOO2.420e-23087.89Metal ABC transporter permease (Fragment) n=1 Tax=... [more]
A0A255XL02_9PROT4.340e-17268.68Metal ABC transporter permease n=1 Tax=Elstera cya... [more]
UPI00115C99F97.380e-17168.42ABC transporter ATP-binding protein/permease n=1 T... [more]
A0A545T7X9_9PROT1.770e-16968.42ABC transporter ATP-binding protein/permease n=2 T... [more]
UPI0019E4F2052.050e-16666.40ABC transporter ATP-binding protein/permease n=2 T... [more]
A0A1C3RKE9_9PROT8.250e-16664.21ATP-binding cassette subfamily B n=2 Tax=Terasakie... [more]
A0A2D9F124_9PROT9.090e-16665.00Metal ABC transporter permease n=2 Tax=Rhodospiril... [more]
A0A178MMS9_9PROT1.280e-16567.73Metal ABC transporter permease n=2 Tax=Magnetospir... [more]
A0A2A5DX77_9PROT1.860e-16567.20Metal ABC transporter permease n=1 Tax=Rhodospiril... [more]
A0A5C7NWL8_9PROT3.220e-16566.58ABC transporter ATP-binding protein/permease n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13380contigP-wetherbeei_contig13380:643..1850 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1244869.H261_09899
PFAMsABC_membrane,ABC_tran
Model size1140
Max annot lvl204441|Rhodospirillales
KEGG koko:K06147
KEGG TC3.A.1.106,3.A.1.109,3.A.1.21
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.57e-165
EggNOG OGsCOG5265@1|root,COG5265@2|Bacteria,1NSKS@1224|Proteobacteria,2UQAG@28211|Alphaproteobacteria,2JR6D@204441|Rhodospirillales
DescriptionCOG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components
Cds size1140
COG categoryV
BRITEko00000,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185983.2293003-CDS-P-wetherbeei_contig13380:642..8551683185983.2293003-CDS-P-wetherbeei_contig13380:642..855Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13380 643..855 +
1683185983.237818-CDS-P-wetherbeei_contig13380:923..18501683185983.237818-CDS-P-wetherbeei_contig13380:923..1850Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13380 924..1850 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13380.2.1prot_P-wetherbeei_contig13380.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13380 643..1850 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13380.2.1

>prot_P-wetherbeei_contig13380.2.1 ID=prot_P-wetherbeei_contig13380.2.1|Name=mRNA_P-wetherbeei_contig13380.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=380bp
ICSQAFSELREIVFARVAHQAMHQVALETFEHLHRLSLRFHLDRQTGGLN
RAIERGTAGIENLLHFMLFQAVVPTVLEITLVCGTLWYIYDWRFAAVTLV
TIVLYVAYTFAVTAWRLRYRRAMLEAEGEASTKAIDSLLNYETVKYFGNE
AHEAKRFDKSLDAYERAAVLSKTSLSILNVGQGFVIAIGLTAMMMLAAFD
VAAGAMTVGGFVMVNAYLIQLYLPLNFLGMVYREIRQALIDMQSMFKLLH
ANAEIVDDPAAPELKVTGAHVRFEGVTFGYDARRTILDGVDLDVPPGKTL
AIVGSSGAGKSTISRLLFRFYDVTAGAITIDGQDIRNVTQGSVRAAIGIV
PQDTVLFNDTIYYNIAYGRPSATTEEVEDA
back to top

mRNA from alignment at P-wetherbeei_contig13380:643..1850+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13380.2.1 ID=mRNA_P-wetherbeei_contig13380.2.1|Name=mRNA_P-wetherbeei_contig13380.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1208bp|location=Sequence derived from alignment at P-wetherbeei_contig13380:643..1850+ (Phaeothamnion wetherbeei SAG_119_79)
ATCTGCTCGCAGGCCTTCAGCGAATTGCGCGAGATCGTCTTCGCGCGCGT CGCCCACCAGGCGATGCATCAGGTGGCGCTGGAGACGTTCGAGCACCTGC ATCGGCTCTCGCTGCGCTTCCATCTCGACCGGCAGACCGGTGGCCTCAAC CGCGCCATCGAGCGCGGAACGGCGGGCATCGAGAACCTGCTGCACTTCAT GCTCTTCCAGGCCGTGCCGCCCGTGCTCGCGATCNNNNNNNNNNGTGTAT CGAGATCCTTCTGCTCTTCTTGCTCTTCCAGGTCGTGCCGACCGTGCTCG AGATCACGCTCGTGTGCGGCACGCTCTGGTACATCTACGATTGGCGCTTT GCTGCCGTCACGCTCGTCACGATCGTTCTCTACGTGGCGTACACCTTCGC CGTCACCGCATGGCGGCTGCGCTACCGCCGCGCGATGCTGGAGGCCGAGG GCGAGGCCTCGACCAAGGCGATCGACAGTCTGCTCAACTACGAGACGGTC AAGTATTTCGGCAACGAGGCGCACGAGGCGAAACGCTTCGACAAATCGCT CGACGCCTACGAGCGCGCGGCCGTCCTCTCCAAGACGTCGCTGTCGATCC TCAACGTCGGCCAGGGCTTCGTCATCGCCATCGGCCTGACGGCGATGATG ATGCTGGCCGCCTTCGACGTCGCGGCAGGCGCCATGACCGTCGGCGGCTT CGTCATGGTGAACGCCTATCTGATCCAGCTCTATCTGCCGCTCAATTTCC TCGGCATGGTCTATCGCGAGATCCGGCAGGCGCTGATCGACATGCAGTCG ATGTTCAAGCTGCTGCACGCAAATGCCGAAATCGTCGACGATCCGGCGGC ACCCGAGTTGAAAGTGACCGGCGCCCATGTCCGTTTCGAAGGCGTGACGT TCGGTTACGATGCGCGGCGCACGATCCTCGACGGTGTCGATCTCGACGTG CCGCCGGGCAAGACGCTCGCCATCGTCGGTTCGTCCGGCGCGGGAAAATC CACGATCTCGCGCCTGCTGTTCCGCTTCTACGACGTGACCGCCGGCGCGA TCACGATCGACGGACAGGATATCCGCAATGTGACGCAAGGCTCCGTCCGC GCGGCGATCGGCATCGTTCCGCAGGACACGGTGCTGTTCAACGACACGAT TTACTACAACATCGCCTATGGCCGCCCGTCGGCGACGACGGAAGAAGTCG AGGACGCT
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig13380:643..1850+

>mRNA_P-wetherbeei_contig13380.2.1 ID=mRNA_P-wetherbeei_contig13380.2.1|Name=mRNA_P-wetherbeei_contig13380.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1140bp|location=Sequence derived from alignment at P-wetherbeei_contig13380:643..1850+ (Phaeothamnion wetherbeei SAG_119_79)
ATCTGCTCGCAGGCCTTCAGCGAATTGCGCGAGATCGTCTTCGCGCGCGT
CGCCCACCAGGCGATGCATCAGGTGGCGCTGGAGACGTTCGAGCACCTGC
ATCGGCTCTCGCTGCGCTTCCATCTCGACCGGCAGACCGGTGGCCTCAAC
CGCGCCATCGAGCGCGGAACGGCGGGCATCGAGAACCTGCTGCACTTCAT
GCTCTTCCAGGCCGTCGTGCCGACCGTGCTCGAGATCACGCTCGTGTGCG
GCACGCTCTGGTACATCTACGATTGGCGCTTTGCTGCCGTCACGCTCGTC
ACGATCGTTCTCTACGTGGCGTACACCTTCGCCGTCACCGCATGGCGGCT
GCGCTACCGCCGCGCGATGCTGGAGGCCGAGGGCGAGGCCTCGACCAAGG
CGATCGACAGTCTGCTCAACTACGAGACGGTCAAGTATTTCGGCAACGAG
GCGCACGAGGCGAAACGCTTCGACAAATCGCTCGACGCCTACGAGCGCGC
GGCCGTCCTCTCCAAGACGTCGCTGTCGATCCTCAACGTCGGCCAGGGCT
TCGTCATCGCCATCGGCCTGACGGCGATGATGATGCTGGCCGCCTTCGAC
GTCGCGGCAGGCGCCATGACCGTCGGCGGCTTCGTCATGGTGAACGCCTA
TCTGATCCAGCTCTATCTGCCGCTCAATTTCCTCGGCATGGTCTATCGCG
AGATCCGGCAGGCGCTGATCGACATGCAGTCGATGTTCAAGCTGCTGCAC
GCAAATGCCGAAATCGTCGACGATCCGGCGGCACCCGAGTTGAAAGTGAC
CGGCGCCCATGTCCGTTTCGAAGGCGTGACGTTCGGTTACGATGCGCGGC
GCACGATCCTCGACGGTGTCGATCTCGACGTGCCGCCGGGCAAGACGCTC
GCCATCGTCGGTTCGTCCGGCGCGGGAAAATCCACGATCTCGCGCCTGCT
GTTCCGCTTCTACGACGTGACCGCCGGCGCGATCACGATCGACGGACAGG
ATATCCGCAATGTGACGCAAGGCTCCGTCCGCGCGGCGATCGGCATCGTT
CCGCAGGACACGGTGCTGTTCAACGACACGATTTACTACAACATCGCCTA
TGGCCGCCCGTCGGCGACGACGGAAGAAGTCGAGGACGCT
back to top