mRNA_P-wetherbeei_contig1337.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1337.1.1 vs. uniprot
Match: D7FZ34_ECTSI (Carnitine/acylcarnitine translocase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ34_ECTSI) HSP 1 Score: 140 bits (353), Expect = 6.910e-38 Identity = 85/152 (55.92%), Postives = 101/152 (66.45%), Query Frame = 1
Query: 46 RSAGLSILSGGTFFKGLGATFGRDVIPHGVWFASWEASKRQFAAWEGVSEAH---ISAAAHLASGAVAATVAWLVGYPFDVIKTRMQAHGGGS--GGDAAEFSLSMTGMARRMQAREGVAVFYRGLGLKLARAIPQSAVGFYLYETVAKFLR 486
R+ GLS G GLGAT GRDV+PHGVWFAS+E K++F+A EGV +S AA LASG +AAT AWLVGYPFDVIKTR+QA G G GG A A+ M + +G+ VFYRG GLKLARA+P S +GF+ YE AK LR
Sbjct: 161 RTFGLS----GLLSTGLGATMGRDVLPHGVWFASYEWCKQEFSAREGVKACDNGALSVAAQLASGGIAATTAWLVGYPFDVIKTRIQAAGMGKVPGGVVAT--------AQHMASVDGMGVFYRGFGLKLARAVPMSMIGFFAYEVAAKQLR 300
BLAST of mRNA_P-wetherbeei_contig1337.1.1 vs. uniprot
Match: A0A836CMX5_9STRA (Carnitine/acylcarnitine translocase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMX5_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.370e-35 Identity = 77/133 (57.89%), Postives = 91/133 (68.42%), Query Frame = 1
Query: 88 KGLGATFGRDVIPHGVWFASWEASKRQFAAWEGVSEAHISAAAHLASGAVAATVAWLVGYPFDVIKTRMQAHGGGSGGDAAEFSLSMTGMARRMQAREGVAVFYRGLGLKLARAIPQSAVGFYLYETVAKFLR 486
+GL AT RDV+PHGVWFAS+EA+KR A + + AA +A+GA AAT AW VGYP DV+KTRMQAHG + G AE RM A EGV VF+RGLGLKLARAIP SA+GF+ YE VA +LR
Sbjct: 196 QGLSATLWRDVLPHGVWFASYEAAKRALAG--DAAAGPLDPAAQVAAGATAATAAWCVGYPADVVKTRMQAHG--ASGSFAE-------TVARMHAAEGVRVFWRGLGLKLARAIPMSAIGFFAYEEVAAYLR 317
BLAST of mRNA_P-wetherbeei_contig1337.1.1 vs. uniprot
Match: A0A7S2EPP7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EPP7_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.380e-27 Identity = 75/171 (43.86%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 4 QLVKIRMQMLALDGRSAGLSILSGGTF-----FKGLGATFGRDVIPHGVWFASWEASKRQFAAWEGVSEAHISAAAHLASGAVAATVAWLVGYPFDVIKTRMQAHGGGSGGDAAEF--SLSMTGMARRMQAREG---VAVFYRGLGLKLARAIPQSAVGFYLYETVAKFLR 486
+L+K+ Q++ SA SI++ G F ++GLGAT RD +PHGVWFAS++ SK + +G SA L SGA AA AW VGYPFDVIKTR+QA A EF S S+ R + + A YRG LK+A+A+P SAV FY+YE+V + LR
Sbjct: 35 ELIKVNQQVIGRSFSSA-TSIVTSGLFSRQIAWRGLGATLLRDGLPHGVWFASYQYSKDYLSQIDGTYPGKSSAFIPLFSGAFAAFTAWAVGYPFDVIKTRIQA--------AKEFNESKSVAQATREILSESNGRPFAALYRGFWLKIAKAVPASAVNFYVYESVVESLR 196
BLAST of mRNA_P-wetherbeei_contig1337.1.1 vs. uniprot
Match: F0YG70_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG70_AURAN) HSP 1 Score: 111 bits (278), Expect = 4.510e-27 Identity = 66/143 (46.15%), Postives = 86/143 (60.14%), Query Frame = 1
Query: 76 GTFFKGLGATFGRDVIPHGVWFASWEASKRQFAAWEGVSEAHISAAAHLASGAVAATVAWLVGYPFDVIKTRMQAHGGGSGGDAAEFSLSMTGMARRMQAREG-------VAVFYRGLGLKLARAIPQSAVGFYLYETVAKFL 483
G F+GL ATF RDV+PHGVWF ++ +K + A G +A + A GA AATVAW+VGYPFD++KTR+Q + LS+TG AR + RE VAV YRGLGLKL RA+P S + F+ YE+ + L
Sbjct: 137 GAAFRGLSATFYRDVVPHGVWFLAYADAKARLEASRGADDATVPVVA----GAWAATVAWVVGYPFDLLKTRIQ---------GSPTPLSLTGAARDLLRREAAPGAVSAVAVLYRGLGLKLLRAVPSSGLNFFAYESAKREL 266
BLAST of mRNA_P-wetherbeei_contig1337.1.1 vs. uniprot
Match: A0A0M0K9X8_9EUKA (Solute carrier family 25 member 45 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K9X8_9EUKA) HSP 1 Score: 109 bits (272), Expect = 4.980e-26 Identity = 68/136 (50.00%), Postives = 80/136 (58.82%), Query Frame = 1
Query: 88 KGLGATFGRDVIPHGVWFASWEASKRQFAAWEGVSEAH----------ISAAAHLASGAVAATVAWLVGYPFDVIKTRMQAHGGGSGGDAAEFSLSMTGMARRMQAREGVAVFYRGLGLKLARAIPQSAVGFYLYE 465
KGL AT RDV+PHGVWFA++E SK+ F SEA +S A L+SGA AA AW+VGYP DVIKTR Q GG S+ AR + A G+ FY GLGLKL RA+P SAVGF+ YE
Sbjct: 151 KGLYATLLRDVVPHGVWFAAYEYSKKHFE--RRASEAAGLPVGGTPPPLSTVAQLSSGAFAAIAAWVVGYPADVIKTRCQMEGG---------QASVAEAARAIYAEGGLRAFYNGLGLKLLRAVPMSAVGFFAYE 275
BLAST of mRNA_P-wetherbeei_contig1337.1.1 vs. uniprot
Match: A0A8J5XL04_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XL04_DIALT) HSP 1 Score: 108 bits (271), Expect = 1.010e-25 Identity = 72/167 (43.11%), Postives = 98/167 (58.68%), Query Frame = 1
Query: 4 QLVKIRMQMLALDGRSAGLSILSGGT----------FFKGLGATFGRDVIPHGVWFASWEASKRQFAAWEGVSEAHISAAAHLASGAVAATVAWLVGYPFDVIKTRMQAHGGGSGGDAAEFSLSMTGMARRMQAREG---VAVFYRGLGLKLARAIPQSAVGFYLYE 465
+LVK+ +Q + + AG +L+G + ++GL AT RD +PHGVWFAS+E KR+ AA + +AAA L+ GA AATVAW VGYP D++KTR+Q S A + S+ AR + A G A FYRG GLKLARA+P +A+ F+ YE
Sbjct: 141 ELVKVHLQ--SSSPKEAGAGLLAGASKVYATIGVPAIWRGLSATLLRDGLPHGVWFASYEWGKRELAARD-PDRVLPTAAAPLSCGAFAATVAWAVGYPADIVKTRIQ-----SPAHAGRDAPSVLAAARELLAESGGRPFAAFYRGFGLKLARAVPMNALSFFAYE 299
BLAST of mRNA_P-wetherbeei_contig1337.1.1 vs. uniprot
Match: K0TK08_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TK08_THAOC) HSP 1 Score: 108 bits (270), Expect = 1.370e-25 Identity = 75/171 (43.86%), Postives = 90/171 (52.63%), Query Frame = 1
Query: 4 QLVKIRMQMLALDGRSAGLSILSG----GTFFKGLGATFGRDVIPHGVWFASWEASKRQFAAWEGVSEA-------HISAAAHLASGAVAATVAWLVGYPFDVIKTRMQAHGGGSGGDAAEFSLSMTGMARRMQAREGVAVFYRGLGLKLARAIPQSAVGFYLYETVAKFL 483
+LVK+ Q+ SA ++ G ++GL AT RD IPHGVWFAS+E +K A SE A + SGA AAT AWLVGYP D+IKTR+QA G G L +T R + YRGL LKL RAIP SA+GF YET AKFL
Sbjct: 141 ELVKVTQQVAGASASSATTNVARGLFSNAGAWRGLSATMLRDGIPHGVWFASYEYAKTSLALHNSSSEGSEECGKGETDVAIPMLSGAFAATTAWLVGYPADLIKTRIQAGSGYRG------ILDVTRELIRESGGRPILGLYRGLTLKLCRAIPASAIGFLTYETAAKFL 305
BLAST of mRNA_P-wetherbeei_contig1337.1.1 vs. uniprot
Match: B8BYS8_THAPS (Carnitine/acylcarnitine translocase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYS8_THAPS) HSP 1 Score: 106 bits (264), Expect = 1.730e-24 Identity = 75/173 (43.35%), Postives = 99/173 (57.23%), Query Frame = 1
Query: 4 QLVKIRMQMLALDGRSAGLSILSGGTF-----FKGLGATFGRDVIPHGVWFASWEASKRQFAAWEGVSEAHISA-----AAHLASGAVAATVAWLVGYPFDVIKTRMQAHGGGSGGDAAEFSLSMTGMARRMQAREG---VAVFYRGLGLKLARAIPQSAVGFYLYETVAKFL 483
+L+K+ Q++ +SA S++ GG F +KGLGAT RD IPHGVWF S+E +K + + S+ S A + +GA AAT AW VGYPFD+IKTR+QA G GSG + A+ + G VA Y+G LKL R+IP SA+GF YET AK L
Sbjct: 176 ELIKVTQQVIGKSVKSATTSVV-GGLFSKTGAWKGLGATLLRDGIPHGVWFVSYEYAKTEMTTFSTNSDDEKSTMNDDVAIPMLAGAFAATTAWAVGYPFDLIKTRIQA-GSGSG---------IVSTAKDLINESGGRVVAGLYKGFTLKLLRSIPSSAIGFLAYETAAKAL 337
BLAST of mRNA_P-wetherbeei_contig1337.1.1 vs. uniprot
Match: B7GCN7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCN7_PHATC) HSP 1 Score: 104 bits (259), Expect = 4.040e-24 Identity = 70/163 (42.94%), Postives = 93/163 (57.06%), Query Frame = 1
Query: 4 QLVKIRMQMLALDGRSAGLSILSGGT---FFKGLGATFGRDVIPHGVWFASWEASKRQFAAWEGVSEA--HISAAAHLASGAVAATVAWLVGYPFDVIKTRMQAHGGGSGGDAAEFSLSMTGMARRMQAREGVAVFYRGLGLKLARAIPQSAVGFYLYETVAK 477
+L+K+ Q+ R AG ++L+ ++GL AT RD IPHGVWFA++E +K +G+ E S + LASGA+AAT AW VGYP D+IKTR+QA G + T A + GVA YRG GLKL R+IP S +GF +YE V K
Sbjct: 133 ELIKVSQQVRGTPLRDAGGAVLTHWAQPAAWRGLYATLLRDGIPHGVWFATYEVAK------DGLEETLGKDSVSVPLASGALAATAAWAVGYPADLIKTRIQA-----AGPTENHGIVETARAIMNEGNAGVAGLYRGFGLKLVRSIPASMIGFTVYEFVKK 284
BLAST of mRNA_P-wetherbeei_contig1337.1.1 vs. uniprot
Match: A0A7S2U9Y7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9Y7_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 2.850e-23 Identity = 65/155 (41.94%), Postives = 85/155 (54.84%), Query Frame = 1
Query: 4 QLVKIRMQMLALDGRSAGLSILSGGTF----FKGLGATFGRDVIPHGVWFASWEASKRQFAAWEGVSEAHISAAAHLASGAVAATVAWLVGYPFDVIKTRMQAHGGGSGGDAAEFSLSMTGMARRMQAREGVAVFYRGLGLKLARAIPQSAVGFY 456
+L+K+R Q+ G +++ G +KGLGAT RD IPHGVWFAS+E +K G + H S L+SGA AAT AW VGYPFD+IKTR+QA G G + A+ S G Y+G LKL RA+P S +GF+
Sbjct: 48 ELIKVRQQIKPQLGALEATKVVTQGLLSPSAWKGLGATLLRDGIPHGVWFASYEGAKMYLDKTIGGTPYHDSFTIPLSSGAFAATAAWGVGYPFDLIKTRIQAGGTGGIWETAQVLRSEPGG------------LYKGFSLKLVRAVPASMIGFF 190 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1337.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1337.1.1 >prot_P-wetherbeei_contig1337.1.1 ID=prot_P-wetherbeei_contig1337.1.1|Name=mRNA_P-wetherbeei_contig1337.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp MQMLALDGRSAGLSILSGGTFFKGLGATFGRDVIPHGVWFASWEASKRQFback to top mRNA from alignment at P-wetherbeei_contig1337:200..963+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1337.1.1 ID=mRNA_P-wetherbeei_contig1337.1.1|Name=mRNA_P-wetherbeei_contig1337.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=764bp|location=Sequence derived from alignment at P-wetherbeei_contig1337:200..963+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1337:200..963+ >mRNA_P-wetherbeei_contig1337.1.1 ID=mRNA_P-wetherbeei_contig1337.1.1|Name=mRNA_P-wetherbeei_contig1337.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig1337:200..963+ (Phaeothamnion wetherbeei SAG_119_79)back to top |