mRNA_P-wetherbeei_contig13341.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13341.1.1
Unique NamemRNA_P-wetherbeei_contig13341.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13341.1.1 vs. uniprot
Match: A0A2E4AY17_9ACTN (HNH domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2E4AY17_9ACTN)

HSP 1 Score: 89.0 bits (219), Expect = 6.030e-21
Identity = 43/92 (46.74%), Postives = 63/92 (68.48%), Query Frame = 1
Query:   13 DQRGKRSLSESTKKLIAGRQSYRCANAPGSNVIPGYQCDRWIND-IGCFNESGYDIDHIVEVADGGGNGIENLQALCPSCHRVKTKASSRER 285
            D+  +R+L+E+ KK +A RQ+++CAN PG+N +  Y C  W+    G F+ESGY+IDHIVE      +  +NLQALC  CHRVKT+ ++ +R
Sbjct:    7 DRSPRRTLTEAQKKTVAARQNFKCANKPGNNPLT-YDCPFWVRGGDGSFDESGYEIDHIVEWCVSRDDSEQNLQALCVCCHRVKTRRAAMKR 97          
BLAST of mRNA_P-wetherbeei_contig13341.1.1 vs. uniprot
Match: A0A5K0U8U3_9VIRU (Uncharacterized protein n=1 Tax=Yasminevirus sp. GU-2018 TaxID=2420051 RepID=A0A5K0U8U3_9VIRU)

HSP 1 Score: 89.0 bits (219), Expect = 1.960e-19
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 1
Query:   28 RSLSESTKKLIAGRQSYRCANAPGSNVI--PGYQCDRW---INDIGCFNESGYDIDHIVEVADGGGNGIENLQALCPSCHRVKTKA 270
            R +S+STKK +AG Q ++CAN+P S ++    Y C  W     + GCF+++GY+IDHI E +  G + I+NLQALC  CH VKTKA
Sbjct:    5 RKVSDSTKKTVAGSQFFKCANSPRSRLLGLESYLCPLWQRKSGNEGCFDQAGYEIDHIEEFSVSGNDNIKNLQALCKMCHAVKTKA 90          
BLAST of mRNA_P-wetherbeei_contig13341.1.1 vs. uniprot
Match: A0A6C0B0D9_9ZZZZ (HNHc domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0B0D9_9ZZZZ)

HSP 1 Score: 82.0 bits (201), Expect = 3.580e-18
Identity = 40/65 (61.54%), Postives = 44/65 (67.69%), Query Frame = 1
Query:   82 CANAPGSNVIPG---YQCDRWINDIGCFNESGYDIDHIVEVADGGGNGIENLQALCPSCHRVKTK 267
            CAN PG N  PG   Y C  W ++ G F+ESG+ IDHIVEV  GG N I NLQ LCPSCH VKTK
Sbjct:   20 CANVPG-NFAPGCRNYICPMWKSNGGYFDESGFQIDHIVEVTHGGSNEITNLQVLCPSCHAVKTK 83          
BLAST of mRNA_P-wetherbeei_contig13341.1.1 vs. uniprot
Match: A0A6C0AJH3_9ZZZZ (HNHc domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AJH3_9ZZZZ)

HSP 1 Score: 76.6 bits (187), Expect = 2.000e-15
Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 1
Query:   28 RSLSESTKKLIAGRQSYRCANAPGSNVIPGYQCDRWINDIGCFNESGYDIDHIVEVADGGGNGIENLQALCPSCHRVKT 264
            R+++ES K+ +AGRQ ++CA +     I  Y C         F+ESGY+IDHI E+ DGG N +ENLQALC  CHRVKT
Sbjct:    3 RNVTESQKRRVAGRQRFKCAAS-----ILDYTCPLKGEP---FDESGYEIDHIKELRDGGSNDLENLQALCIMCHRVKT 73          
BLAST of mRNA_P-wetherbeei_contig13341.1.1 vs. uniprot
Match: A0A481YSA6_9VIRU (HNH endonuclease n=1 Tax=Marseillevirus LCMAC101 TaxID=2506602 RepID=A0A481YSA6_9VIRU)

HSP 1 Score: 79.7 bits (195), Expect = 2.060e-15
Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 1
Query:   28 RSLSESTKKLIAGRQSYRCANAPGSNVI--PGYQCDRWI---NDIGCFNESGYDIDHIVEVADGGGNGIENLQALCPSCHRVKTK 267
            R L+++ KK +AG Q ++C N P S +I    Y C  W     D G F+ SG+DIDHI E +    + ++NLQALC SCH+VKTK
Sbjct:    3 RRLTQAQKKFVAGEQRFKCNNRPNSTLIGLDDYDCPLWKADGEDKGIFDASGFDIDHITEWSISKDDSLDNLQALCISCHKVKTK 87          
BLAST of mRNA_P-wetherbeei_contig13341.1.1 vs. uniprot
Match: A0A6C0L2Z6_9ZZZZ (HNHc domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0L2Z6_9ZZZZ)

HSP 1 Score: 60.8 bits (146), Expect = 2.670e-9
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 1
Query:   34 LSESTKKLIAGRQSYRCANAPGSNVIPGYQCDRWINDIGCFNESGYD--IDHIVEVADGGGNGIENLQALCPSCHRVKT 264
            +S   +++I   Q+Y+C   PG N    Y+CD  +N     ++   +   DHIV   +GG NG+EN+QALC SCH +KT
Sbjct:   58 ISSQKQQIILKEQNYKC-RGPGKNDNTEYECDMNVNGKSFSDKKASEPQFDHIVRWKEGG-NGLENIQALCASCHLMKT 134          
BLAST of mRNA_P-wetherbeei_contig13341.1.1 vs. uniprot
Match: A0A1B3AY72_9CAUD (HNH endonuclease n=2 Tax=Bantamvirus TaxID=2560096 RepID=A0A1B3AY72_9CAUD)

HSP 1 Score: 55.5 bits (132), Expect = 6.410e-8
Identity = 27/64 (42.19%), Postives = 38/64 (59.38%), Query Frame = 1
Query:   88 NAPGSNVIPGYQCDRWINDIGCFNESGYDIDHIVEVADGGGNGIENLQALCPSCHRVKTKASSR 279
            N P    + GY C   I    C   S  ++DH++ VA+GGG+ +ENLQ++C  CH+ KT A SR
Sbjct:   18 NRPIRLEMDGYVCQ--IQGPQC-TVSATEVDHVIPVAEGGGDNLENLQSICSECHKPKTHAESR 78          
BLAST of mRNA_P-wetherbeei_contig13341.1.1 vs. uniprot
Match: D6K1C6_9ACTN (HNHc domain-containing protein n=5 Tax=Streptomyces TaxID=1883 RepID=D6K1C6_9ACTN)

HSP 1 Score: 58.2 bits (139), Expect = 8.440e-8
Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 1
Query:   25 KRSLSESTKKLIAGRQSYRCANAPGSNVIPGYQCDRWINDIGCFNESGYDIDHIVEVADGGGNGIENLQALCPSCHRVKTKASSRE 282
            KRSL+   ++L+ GR   RC N P     P    DR             ++DH+VE+ADGG +    + ALCP+CH VKT+ S+RE
Sbjct:  319 KRSLT--ARRLVLGRSEGRCEN-PRCTGQPADVTDR--------RHPILEVDHVVELADGGRDHPSQMVALCPNCHAVKTRGSTRE 393          
BLAST of mRNA_P-wetherbeei_contig13341.1.1 vs. uniprot
Match: A0A6I5H851_9ACTN (HNHc domain-containing protein n=2 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A6I5H851_9ACTN)

HSP 1 Score: 57.0 bits (136), Expect = 1.830e-7
Identity = 30/78 (38.46%), Postives = 42/78 (53.85%), Query Frame = 1
Query:   49 KKLIAGRQSYRCANAPGSNVIPGYQCDRWINDIGCFNESGYDIDHIVEVADGGGNGIENLQALCPSCHRVKTKASSRE 282
            ++L+ GR   RC N P     P    DR             ++DH+VE+ADGG +    + ALCP+CH VKT+ S+RE
Sbjct:  181 RRLVLGRSEGRCEN-PRCTGQPADVTDR--------RHPILEVDHVVELADGGRDHPSQMVALCPNCHAVKTRGSTRE 249          
BLAST of mRNA_P-wetherbeei_contig13341.1.1 vs. uniprot
Match: A0A6G6XLE3_9CAUD (HNH endonuclease n=1 Tax=Gordonia phage DatBoi TaxID=2704037 RepID=A0A6G6XLE3_9CAUD)

HSP 1 Score: 53.9 bits (128), Expect = 2.550e-7
Identity = 20/36 (55.56%), Postives = 29/36 (80.56%), Query Frame = 1
Query:  172 DIDHIVEVADGGGNGIENLQALCPSCHRVKTKASSR 279
            ++DH + VA+GGG+ +ENLQ++CP CH+ KT A SR
Sbjct:   43 EVDHKIPVAEGGGDDLENLQSVCPECHKPKTHAESR 78          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13341.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E4AY17_9ACTN6.030e-2146.74HNH domain-containing protein n=1 Tax=Actinomyceti... [more]
A0A5K0U8U3_9VIRU1.960e-1948.84Uncharacterized protein n=1 Tax=Yasminevirus sp. G... [more]
A0A6C0B0D9_9ZZZZ3.580e-1861.54HNHc domain-containing protein n=1 Tax=viral metag... [more]
A0A6C0AJH3_9ZZZZ2.000e-1550.63HNHc domain-containing protein n=1 Tax=viral metag... [more]
A0A481YSA6_9VIRU2.060e-1545.88HNH endonuclease n=1 Tax=Marseillevirus LCMAC101 T... [more]
A0A6C0L2Z6_9ZZZZ2.670e-939.24HNHc domain-containing protein n=1 Tax=viral metag... [more]
A0A1B3AY72_9CAUD6.410e-842.19HNH endonuclease n=2 Tax=Bantamvirus TaxID=2560096... [more]
D6K1C6_9ACTN8.440e-839.53HNHc domain-containing protein n=5 Tax=Streptomyce... [more]
A0A6I5H851_9ACTN1.830e-738.46HNHc domain-containing protein n=2 Tax=unclassifie... [more]
A0A6G6XLE3_9CAUD2.550e-755.56HNH endonuclease n=1 Tax=Gordonia phage DatBoi Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13341contigP-wetherbeei_contig13341:153..437 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog645465.ACUR01000350_gene5110
PFAMsHNH
Model size285
Max annot lvl201174|Actinobacteria
KEGG koko:K07451
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.38e-08
EggNOG OGsCOG1403@1|root,COG3440@1|root,COG1403@2|Bacteria,COG3440@2|Bacteria,2ID1G@201174|Actinobacteria
Ec32 ortholog descriptionEsV-1-16 HNH nuclease
Ec32 orthologEc-06_006570.1
DescriptionHNH endonuclease
Cds size285
COG categoryV
BRITEko00000,ko01000,ko02048
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185982.0007143-CDS-P-wetherbeei_contig13341:152..4371683185982.0007143-CDS-P-wetherbeei_contig13341:152..437Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13341 153..437 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13341.1.1prot_P-wetherbeei_contig13341.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13341 153..437 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13341.1.1

>prot_P-wetherbeei_contig13341.1.1 ID=prot_P-wetherbeei_contig13341.1.1|Name=mRNA_P-wetherbeei_contig13341.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp
MAASDQRGKRSLSESTKKLIAGRQSYRCANAPGSNVIPGYQCDRWINDIG
CFNESGYDIDHIVEVADGGGNGIENLQALCPSCHRVKTKASSRER
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mRNA from alignment at P-wetherbeei_contig13341:153..437-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13341.1.1 ID=mRNA_P-wetherbeei_contig13341.1.1|Name=mRNA_P-wetherbeei_contig13341.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig13341:153..437- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAGCAAGTGACCAGCGTGGTAAGCGAAGTTTGTCCGAATCTACAAA GAAACTCATCGCTGGCCGACAGAGCTACAGATGCGCAAATGCGCCAGGAT CAAATGTTATTCCGGGCTATCAATGTGATAGATGGATCAATGATATAGGT TGTTTCAACGAATCGGGATATGACATCGATCATATTGTGGAGGTTGCGGA CGGGGGCGGCAATGGTATCGAAAATCTACAAGCACTTTGCCCAAGCTGTC ACCGGGTGAAAACGAAGGCAAGCTCTCGAGAGCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13341:153..437-

>mRNA_P-wetherbeei_contig13341.1.1 ID=mRNA_P-wetherbeei_contig13341.1.1|Name=mRNA_P-wetherbeei_contig13341.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig13341:153..437- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAGCAAGTGACCAGCGTGGTAAGCGAAGTTTGTCCGAATCTACAAA
GAAACTCATCGCTGGCCGACAGAGCTACAGATGCGCAAATGCGCCAGGAT
CAAATGTTATTCCGGGCTATCAATGTGATAGATGGATCAATGATATAGGT
TGTTTCAACGAATCGGGATATGACATCGATCATATTGTGGAGGTTGCGGA
CGGGGGCGGCAATGGTATCGAAAATCTACAAGCACTTTGCCCAAGCTGTC
ACCGGGTGAAAACGAAGGCAAGCTCTCGAGAGCGC
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